/*=========================================================================

  Program:   Advanced Normalization Tools

  Copyright (c) ConsortiumOfANTS. All rights reserved.
  See accompanying COPYING.txt or
 https://github.com/stnava/ANTs/blob/master/ANTSCopyright.txt for details.

     This software is distributed WITHOUT ANY WARRANTY; without even
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#ifndef __itkVectorParameterizedNeighborhoodOperatorImageFilter_h
#define __itkVectorParameterizedNeighborhoodOperatorImageFilter_h

#include "itkImageToImageFilter.h"
#include "itkNeighborhoodOperator.h"
#include "itkImage.h"
#include "itkImageBoundaryCondition.h"

#include "itkGaussianOperator.h"

namespace itk
{
/** \class VectorParameterizedNeighborhoodOperatorImageFilter
 * \brief Applies a single scalar NeighborhoodOperator to an
 * itk::Vector image region.
 *
 * This filter calculates successive inner products between a single
 * NeighborhoodOperator and a NeighborhoodIterator, which is swept
 * across every pixel in an image region.  For operators that are
 * symmetric across their axes, the result is a fast convolution
 * with the image region.  Apply the mirror()'d operator for
 * non-symmetric NeighborhoodOperators.
 *
 * This filter assumes that the input and output images have
 * pixels which are itk::Vectors of the same vector dimension.
 * The input NeighbourhoodOperator must have a scalar type
 * that matches the ValueType of vector pixels.
 *
 * To apply a scalar NeighborhoodOperator to a scalar image
 * use NeighborhoodOperatorImageFilter instead.
 *
 * \ingroup ImageFilters
 *
 * \sa Image
 * \sa Neighborhood
 * \sa NeighborhoodOperator
 * \sa NeighborhoodIterator
 * \sa NeighborhoodOperatorImageFilter
 */

template <typename TInputImage, typename TOutputImage, typename TParamImage>
class VectorParameterizedNeighborhoodOperatorImageFilter final : public ImageToImageFilter<TInputImage, TOutputImage>
{
public:
  /** Standard class typedefs. */
  typedef VectorParameterizedNeighborhoodOperatorImageFilter Self;
  typedef ImageToImageFilter<TInputImage, TOutputImage>      Superclass;
  typedef SmartPointer<Self>                                 Pointer;
  typedef SmartPointer<const Self>                           ConstPointer;

  /** Method for creation through the object factory. */
  itkNewMacro(Self);

  /** Run-time type information (and related methods) */
  itkTypeMacro(VectorParameterizedNeighborhoodOperatorImageFilter, ImageToImageFilter);

  /** Extract some information from the image types.  Dimensionality
   * of the two images is assumed to be the same. */
  typedef typename TInputImage::Pointer            InputImagePointer;
  typedef typename TOutputImage::Pointer           OutputImagePointer;
  typedef typename TOutputImage::PixelType         OutputPixelType;
  typedef typename TOutputImage::InternalPixelType OutputInternalPixelType;
  typedef typename TInputImage::PixelType          InputPixelType;
  typedef typename TInputImage::InternalPixelType  InputInternalPixelType;
  typedef typename OutputPixelType::ValueType      ScalarValueType;
  typedef TParamImage                              ParameterImageType;
  typedef typename TParamImage::Pointer            ParameterImagePointer;
  typedef typename TParamImage::PixelType          ParameterImageTypePixelType;

  /** Determine image dimension. */
  itkStaticConstMacro(ImageDimension, unsigned int, TOutputImage::ImageDimension);

  /** Image typedef support */
  typedef TInputImage  InputImageType;
  typedef TOutputImage OutputImageType;

  /** Typedef for generic boundary condition pointer */
  typedef ImageBoundaryCondition<OutputImageType> * ImageBoundaryConditionPointerType;

  /** Superclass typedefs. */
  typedef typename Superclass::OutputImageRegionType OutputImageRegionType;

  typedef itk::GaussianOperator<ScalarValueType, itkGetStaticConstMacro(ImageDimension)> OperatorType;
  //  Neighborhood<ScalarValueType, itkGetStaticConstMacro(ImageDimension)>

  /** Sets the operator that is used to filter the image. Note
   * that the operator is stored as an internal COPY (it
   * is not part of the pipeline). */
  void
  SetOperator(OperatorType & p)
  {
    m_Operator = p;
    this->Modified();
  }

  virtual /** Allows a user to override the internal boundary condition. Care should be
           * be taken to ensure that the overriding boundary condition is a persistent
           * object during the time it is referenced.  The overriding condition
           * can be of a different type than the default type as long as it is
           * a subclass of ImageBoundaryCondition. */
    void
    OverrideBoundaryCondition(const ImageBoundaryConditionPointerType i)
  {
    m_BoundsCondition = i;
  }

  /** VectorParameterizedNeighborhoodOperatorImageFilter needs a larger input requested
   * region than the output requested region.  As such,
   * VectorParameterizedNeighborhoodOperatorImageFilter needs to provide an implementation for
   * GenerateInputRequestedRegion() in order to inform the pipeline
   * execution model.
   *
   * \sa ProcessObject::GenerateInputRequestedRegion() */
  void
  GenerateInputRequestedRegion() override;

  void
  SetParameterImage(ParameterImagePointer I)
  {
    m_ParameterImage = I;
  }

protected:
  VectorParameterizedNeighborhoodOperatorImageFilter()
  {
    m_ParameterImage = nullptr;
    this->DynamicMultiThreadingOff();
  }

  virtual ~VectorParameterizedNeighborhoodOperatorImageFilter() override {}

  /** VectorParameterizedNeighborhoodOperatorImageFilter can be implemented as a
   * multithreaded filter.  Therefore, this implementation provides a
   * ThreadedGenerateData() routine which is called for each
   * processing thread. The output image data is allocated
   * automatically by the superclass prior to calling
   * ThreadedGenerateData().  ThreadedGenerateData can only write to
   * the portion of the output image specified by the parameter
   * "outputRegionForThread"
   * \sa ImageToImageFilter::ThreadedGenerateData(),
   *     ImageToImageFilter::GenerateData() */
  void
  ThreadedGenerateData(const OutputImageRegionType & outputRegionForThread, ThreadIdType threadId) override;

  void
  PrintSelf(std::ostream & os, Indent indent) const override
  {
    Superclass::PrintSelf(os, indent);
  }

private:
  VectorParameterizedNeighborhoodOperatorImageFilter(const Self &) = delete;
  void
  operator=(const Self &) = delete;

  /** Pointer to the internal operator used to filter the image. */
  OperatorType m_Operator;

  /** Pointer to a persistent boundary condition object used
   * for the image iterator. */
  ImageBoundaryConditionPointerType m_BoundsCondition;

  ParameterImagePointer m_ParameterImage;
};
} // end namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#  include "itkVectorParameterizedNeighborhoodOperatorImageFilter.hxx"
#endif

#endif
