File formats — APBS-PDB2PQR 1.6 documentation

# File formats

## Mesh and scalar data formats

Mesh and scalar data formats

- OpenDX scalar data format
- MCSF mesh format
- UHBD scalar data format

## Molecular structure formats

Molecular structure formats

- PQR molecular structure format
- PDB molecular structure format
- MOL2 molecular structure format
- XML molecular structure format

## Matrix formats

Matrix formats

- Harwell-Boeing matrix format

### Parameter formats

Parameter formats

- APBS XML parameter format
- PDB2PQR NAMES files
- APBS flat-file parameter format

Todo

Migrate PDB2PQR XML format information over from programmer’s guide.