core.PlotData

Package core :: Module PlotData |
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# Module PlotData

source code

Created 2012

Author: GieseS

Little plotting script which is called in the analysis of different mappings to an artificial reference genome. It produces the following plots:

1) ROC Curve 2) Overview histograms for FP / TP.

Functions | [hide private]
trapezoidal_rule(x, y) Approximates the integral through the points a,b | source code
CalculateRoc2(dataArray, prefix, readsize, uniquehits, mappedreads, filename) Calculates the adjusted ROC curve as well as the AUC value derived from the adjusted points and writes the ROC tables to .txt files. | source code
plotOverviewHist(fp, tp, label, prefix, mappernames) Plots true positives and false positives into 2 different histogram subplots. | source code

Variables | [hide private]
| __package__ = ``'``core``'``