S-Index
Date: 2014-10-01

A B C D E F G H I L M N O Q R S T U

## S

setGenotype(char) - Method in class artificialFastqGenerator.Nucleobase
  Set the nucleobase's genotype.
setLeftReadAndNeedsWriting(boolean) - Method in class artificialFastqGenerator.Read
  Set whether the Read object is a left read and needs writing.
setPairedEndRead(Read) - Method in class artificialFastqGenerator.Read
  Set the read with which this read object forms a pair.
setRedundantReadToNull(T) - Static method in class artificialFastqGenerator.ArtificialFastqGenerationUtils
  Set the sequence field of Read and BabyRead objects to null and then also set the object to null.
setSequence(ArrayList<Nucleobase>) - Method in class artificialFastqGenerator.AbstractRead
  Set the sequence of nucleobases from the reference genome which this Read object is a read of.
setTargetCoverage(int) - Method in class artificialFastqGenerator.Nucleobase
  Set the target coverage for this nucleobase (the number of reads we want to include this nucleobase).
simulateErrorInRead - Static variable in class artificialFastqGenerator.Main
startingX - Static variable in class artificialFastqGenerator.Main
startingY - Static variable in class artificialFastqGenerator.Main
startSequenceIdentifier - Static variable in class artificialFastqGenerator.Main

A B C D E F G H I L M N O Q R S T U