[[scripts]]
Bash scripts
^^^^^^^^^^^^

A set of bash scripts for common tasks using igor.
We can use igor-compute_pgen to calculate the Pgen of
a specific sequence.

[source,shell]
----
igor-compute_pgen <specie> <chain> <ntsequence>
----
Example

[source,shell]
----
igor-compute_pgen human beta actcagctttgtatttctgtgccagcagcgtagattgggacagggggcctcctacgagcagtacgtcgggccg
----

