#---JalviewX Properties File---
#Mon Dec 14 16:32:45 GMT 2020
BACKUPFILES_CUSTOM=_BACKUPFILESTESTTMP%n\t6\tfalse\tfalse\t2\tfalse
BACKUPFILES_ENABLED=true
BACKUPFILES_PRESET=2
BACKUPFILES_SAVED=~\t1\tfalse\tfalse\t1\tfalse
ADD_SS_ANN=false
ADD_TEMPFACT_ANN=false
ANNOTATIONCOLOUR_MAX=ff0000
ANNOTATIONCOLOUR_MIN=ffc800
ANTI_ALIAS=false
AUTHORFNAMES=Jim Procter, Mungo Carstairs, Ben Soares, Kira Mourao, Tochukwu 'Charles' Ofoegbu, Andrew Waterhouse, Jan Engelhardt, Lauren Lui, Anne Menard, Daniel Barton, Natasha Sherstnev, David Roldan-Martinez, Michele Clamp, James Cuff, Steve Searle, David Martin & Geoff Barton
AUTHORS=J Procter, M Carstairs, B Soares, K Mourao, TC Ofoegbu, AM Waterhouse, J Engelhardt, LM Lui, A Menard, D Barton, N Sherstnev, D Roldan-Martinez, M Clamp, S Searle, G Barton
AUTO_CALC_CONSENSUS=true
BLC_JVSUFFIX=true
BUILD_DATE=20\:10\:14 10 December 2020
CLUSTAL_JVSUFFIX=true
DAS_ACTIVE_SOURCE=uniprot\t
DAS_LOCAL_SOURCE=
DAS_REGISTRY_URL=http\://www.ebi.ac.uk/das-srv/registry/das/
DEFAULT_COLOUR=None
DEFAULT_COLOUR_NUC=None
DEFAULT_COLOUR_PROT=None
DEFAULT_FILE_FORMAT=FASTA
DEFAULT_URL=EMBL-EBI Search
EPS_RENDERING=Prompt each time
EXPORT_EMBBED_BIOJSON=true
FASTA_JVSUFFIX=true
FIGURE_AUTOIDWIDTH=false
FIGURE_FIXEDIDWIDTH=
FIGURE_USERIDWIDTH=
FONT_NAME=SansSerif
FONT_SIZE=10
FONT_STYLE=plain
GAP_COLOUR=c0c0c0
GAP_SYMBOL=-
HIDDEN_COLOUR=2c2c2c
HTML_RENDERING=Prompt each time
ID_ITALICS=true
INSTALLATION=Source git-commit\:225f7f621b [develop]
JALVIEW_NEWS_RSS_LASTMODIFIED=29 Oct 2020, 21\:44\:11
JALVIEW_RSS_WINDOW_SCREEN_HEIGHT=301
JALVIEW_RSS_WINDOW_SCREEN_WIDTH=550
JALVIEW_RSS_WINDOW_SCREEN_X=0
JALVIEW_RSS_WINDOW_SCREEN_Y=0
JAVA_CONSOLE_SCREEN_HEIGHT=250
JAVA_CONSOLE_SCREEN_WIDTH=337
JAVA_CONSOLE_SCREEN_X=622
JAVA_CONSOLE_SCREEN_Y=320
JWS2HOSTURLS=http\://www.compbio.dundee.ac.uk/jabaws
LAST_DIRECTORY=/Volumes/Data/Users/jimp/Documents/testing/Jalview/examples
logs.Jalview.level=DEBUG
MAP_WITH_SIFTS=false
MSF_JVSUFFIX=true
NOQUESTIONNAIRES=true
PAD_GAPS=false
PFAM_JVSUFFIX=true
PILEUP_JVSUFFIX=true
PIR_JVSUFFIX=true
PIR_MODELLER=false
PROXY_AUTH=false
RECENT_FILE=examples/uniref50.fa\t/Volumes/Data/Users/jimp/Documents/testing/Jalview/examples/RF00031_folded.stk\t/Volumes/Data/Users/jimp/bs_ig_mult.out
RECENT_URL=http\://www.jalview.org/examples/exampleFile_2_7.jar
RIGHT_ALIGN_IDS=false
RSBS_SERVICES=|Multi-Harmony|Analysis|Sequence Harmony and Multi-Relief (Brandt et al. 2010)|hseparable,gapCharacter\='-',returns\='ANNOTATION'|?tool\=jalview|http\://zeus.few.vu.nl/programs/shmrwww/index.php?tool\=jalview&groups\=$PARTITION\:min\='2',minsize\='2',sep\=' '$&ali_file\=$ALIGNMENT\:format\='Fasta',writeasfile$
SCALE_PROTEIN_TO_CDNA=false
SCREENGEOMETRY_HEIGHT=1080
SCREENGEOMETRY_WIDTH=1920
SCREEN_HEIGHT=1018
SCREEN_WIDTH=1920
SCREEN_X=0
SCREEN_Y=0
SEQUENCE_LINKS=EMBL-EBI Search|https\://www.ebi.ac.uk/ebisearch/search.ebi?db\=allebi&query\=$SEQUENCE_ID$
SHOW_ANNOTATIONS=true
SHOW_AUTOCALC_ABOVE=true
SHOW_CONSENSUS_HISTOGRAM=true
SHOW_CONSENSUS_LOGO=false
SHOW_CONSERVATION=true
SHOW_DBREFS_TOOLTIP=true
SHOW_ENFIN_SERVICES=true
SHOW_FULLSCREEN=false
SHOW_GROUP_CONSENSUS=false
SHOW_GROUP_CONSERVATION=false
SHOW_IDENTITY=true
SHOW_JAVA_CONSOLE=false
SHOW_JVSUFFIX=true
SHOW_JWS2_SERVICES=true
SHOW_NPFEATS_TOOLTIP=true
SHOW_OCCUPANCY=true
SHOW_OVERVIEW=false
SHOW_OV_HIDDEN_AT_START=false
SHOW_QUALITY=true
SHOW_STARTUP_FILE=false
SHOW_UNCONSERVED=false
SHOW_WSDISCOVERY_ERRORS=true
SORT_ALIGNMENT=No sort
SORT_ANNOTATIONS=NONE
SORT_BY_TREE=false
STARTUP_FILE=http\://www.jalview.org/examples/exampleFile_2_3.jar
STRUCT_FROM_PDB=false
STRUCTURE_DISPLAY=JMOL
SVG_RENDERING=Prompt each time
USAGESTATS=false
USE_LEGACY_GAP=false
USE_PROXY=false
USE_RNAVIEW=false
VERSION=2.11.2.0-develop
VERSION_CHECK=false
WRAP_ALIGNMENT=false
WSMENU_BYHOST=false
WSMENU_BYTYPE=false
YEAR=2018
