Date: 2021-03-03T22:27:18+00:00

Actual source code: deflation.c
petsc-3.14.5 2021-03-03
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      1: #include <../src/ksp/pc/impls/deflation/deflation.h>

      3: const char *const PCDeflationSpaceTypes[] = {
      4:   "haar",
      5:   "db2",
      6:   "db4",
      7:   "db8",
      8:   "db16",
      9:   "biorth22",
     10:   "meyer",
     11:   "aggregation",
     12:   "user",
     13:   "PCDeflationSpaceType",
     14:   "PC_DEFLATION_SPACE_",
     15:   NULL
     16: };

     18: static PetscErrorCode PCDeflationSetInitOnly_Deflation(PC pc,PetscBool flg)
     19: {
     20:   PC_Deflation   *def = (PC_Deflation*)pc->data;

     23:   def->init = flg;
     24:   return(0);
     25: }

     27: /*@
     28:    PCDeflationSetInitOnly - Do only initialization step.
     29:     Sets initial guess to the solution on the deflation space but does not apply
     30:     the deflation preconditioner. The additional preconditioner is still applied.

     32:    Logically Collective

     34:    Input Parameters:
     35: +  pc  - the preconditioner context
     36: -  flg - default PETSC_FALSE

     38:    Options Database Keys:
     39: .    -pc_deflation_init_only <false> - if true computes only the special guess

     41:    Level: intermediate

     43: .seealso: PCDEFLATION
     44: @*/
     45: PetscErrorCode PCDeflationSetInitOnly(PC pc,PetscBool flg)
     46: {

     52:   PetscTryMethod(pc,"PCDeflationSetInitOnly_C",(PC,PetscBool),(pc,flg));
     53:   return(0);
     54: }

     57: static PetscErrorCode PCDeflationSetLevels_Deflation(PC pc,PetscInt current,PetscInt max)
     58: {
     59:   PC_Deflation   *def = (PC_Deflation*)pc->data;

     62:   if (current) def->lvl = current;
     63:   def->maxlvl = max;
     64:   return(0);
     65: }

     67: /*@
     68:    PCDeflationSetLevels - Set the maximum level of deflation nesting.

     70:    Logically Collective

     72:    Input Parameters:
     73: +  pc  - the preconditioner context
     74: -  max - maximum deflation level

     76:    Options Database Keys:
     77: .    -pc_deflation_max_lvl <0> - maximum number of levels for multilevel deflation

     79:    Level: intermediate

     81: .seealso: PCDeflationSetSpaceToCompute(), PCDeflationSetSpace(), PCDEFLATION
     82: @*/
     83: PetscErrorCode PCDeflationSetLevels(PC pc,PetscInt max)
     84: {

     90:   PetscTryMethod(pc,"PCDeflationSetLevels_C",(PC,PetscInt,PetscInt),(pc,0,max));
     91:   return(0);
     92: }

     94: static PetscErrorCode PCDeflationSetReductionFactor_Deflation(PC pc,PetscInt red)
     95: {
     96:   PC_Deflation   *def = (PC_Deflation*)pc->data;

     99:   def->reductionfact = red;
    100:   return(0);
    101: }

    103: /*@
    104:    PCDeflationSetReductionFactor - Set reduction factor for the bottom PCTELESCOPE coarse problem solver.

    106:    Logically Collective

    108:    Input Parameters:
    109: +  pc  - the preconditioner context
    110: -  red - reduction factor (or PETSC_DETERMINE)

    112:    Options Database Keys:
    113: .    -pc_deflation_reduction_factor <\-1> - reduction factor on bottom level coarse problem for PCTELESCOPE

    115:    Notes:
    116:      Default is computed based on the size of the coarse problem.

    118:    Level: intermediate

    120: .seealso: PCTELESCOPE, PCDEFLATION
    121: @*/
    122: PetscErrorCode PCDeflationSetReductionFactor(PC pc,PetscInt red)
    123: {

    129:   PetscTryMethod(pc,"PCDeflationSetReductionFactor_C",(PC,PetscInt),(pc,red));
    130:   return(0);
    131: }

    133: static PetscErrorCode PCDeflationSetCorrectionFactor_Deflation(PC pc,PetscScalar fact)
    134: {
    135:   PC_Deflation   *def = (PC_Deflation*)pc->data;

    138:   /* TODO PETSC_DETERMINE -> compute max eigenvalue with power method */
    139:   def->correct = PETSC_TRUE;
    140:   def->correctfact = fact;
    141:   if (def->correct == 0.0) {
    142:     def->correct = PETSC_FALSE;
    143:   }
    144:   return(0);
    145: }

    147: /*@
    148:    PCDeflationSetCorrectionFactor - Set coarse problem correction factor.
    149:     The Preconditioner becomes P*M^{-1} + fact*Q.

    151:    Logically Collective

    153:    Input Parameters:
    154: +  pc   - the preconditioner context
    155: -  fact - correction factor

    157:    Options Database Keys:
    158: +    -pc_deflation_correction        <false> - if true apply coarse problem correction
    159: -    -pc_deflation_correction_factor <1.0>   - sets coarse problem correction factor

    161:    Notes:
    162:     Any non-zero fact enables the coarse problem correction.

    164:    Level: intermediate

    166: .seealso: PCDEFLATION
    167: @*/
    168: PetscErrorCode PCDeflationSetCorrectionFactor(PC pc,PetscScalar fact)
    169: {

    175:   PetscTryMethod(pc,"PCDeflationSetCorrectionFactor_C",(PC,PetscScalar),(pc,fact));
    176:   return(0);
    177: }

    179: static PetscErrorCode PCDeflationSetSpaceToCompute_Deflation(PC pc,PCDeflationSpaceType type,PetscInt size)
    180: {
    181:   PC_Deflation   *def = (PC_Deflation*)pc->data;

    184:   if (type) def->spacetype = type;
    185:   if (size > 0) def->spacesize = size;
    186:   return(0);
    187: }

    189: /*@
    190:    PCDeflationSetSpaceToCompute - Set deflation space type and size to compute.

    192:    Logically Collective

    194:    Input Parameters:
    195: +  pc   - the preconditioner context
    196: .  type - deflation space type to compute (or PETSC_IGNORE)
    197: -  size - size of the space to compute (or PETSC_DEFAULT)

    199:    Options Database Keys:
    200: +    -pc_deflation_compute_space      <haar> - compute PCDeflationSpaceType deflation space
    201: -    -pc_deflation_compute_space_size <1>    - size of the deflation space

    203:    Notes:
    204:     For wavelet-based deflation, size represents number of levels.

    206:     The deflation space is computed in PCSetUp().

    208:    Level: intermediate

    210: .seealso: PCDeflationSetLevels(), PCDEFLATION
    211: @*/
    212: PetscErrorCode PCDeflationSetSpaceToCompute(PC pc,PCDeflationSpaceType type,PetscInt size)
    213: {

    220:   PetscTryMethod(pc,"PCDeflationSetSpaceToCompute_C",(PC,PCDeflationSpaceType,PetscInt),(pc,type,size));
    221:   return(0);
    222: }

    224: static PetscErrorCode PCDeflationSetSpace_Deflation(PC pc,Mat W,PetscBool transpose)
    225: {
    226:   PC_Deflation   *def = (PC_Deflation*)pc->data;

    230:   /* possibly allows W' = Wt (which is valid but not tested) */
    231:   PetscObjectReference((PetscObject)W);
    232:   if (transpose) {
    233:     MatDestroy(&def->Wt);
    234:     def->Wt = W;
    235:   } else {
    236:     MatDestroy(&def->W);
    237:     def->W = W;
    238:   }
    239:   return(0);
    240: }

    242: /*@
    243:    PCDeflationSetSpace - Set the deflation space matrix (or its (Hermitian) transpose).

    245:    Logically Collective

    247:    Input Parameters:
    248: +  pc        - the preconditioner context
    249: .  W         - deflation matrix
    250: -  transpose - indicates that W is an explicit transpose of the deflation matrix

    252:    Notes:
    253:     Setting W as a multipliplicative MATCOMPOSITE enables use of the multilevel
    254:     deflation. If W = W0*W1*W2*...*Wn, W0 is taken as the first deflation space and
    255:     the coarse problem (W0'*A*W0)^{-1} is again preconditioned by deflation with
    256:     W1 as the deflation matrix. This repeats until the maximum level set by
    257:     PCDeflationSetLevels() is reached or there are no more matrices available.
    258:     If there are matrices left after reaching the maximum level,
    259:     they are merged into a deflation matrix ...*W{n-1}*Wn.

    261:    Level: intermediate

    263: .seealso: PCDeflationSetLevels(), PCDEFLATION
    264: @*/
    265: PetscErrorCode PCDeflationSetSpace(PC pc,Mat W,PetscBool transpose)
    266: {

    273:   PetscTryMethod(pc,"PCDeflationSetSpace_C",(PC,Mat,PetscBool),(pc,W,transpose));
    274:   return(0);
    275: }

    277: static PetscErrorCode PCDeflationSetProjectionNullSpaceMat_Deflation(PC pc,Mat mat)
    278: {
    279:   PC_Deflation     *def = (PC_Deflation*)pc->data;
    280:   PetscErrorCode   ierr;

    283:   PetscObjectReference((PetscObject)mat);
    284:   MatDestroy(&def->WtA);
    285:   def->WtA = mat;
    286:   PetscLogObjectParent((PetscObject)pc,(PetscObject)def->WtA);
    287:   return(0);
    288: }

    290: /*@
    291:    PCDeflationSetProjectionNullSpaceMat - Set the projection null space matrix (W'*A).

    293:    Collective

    295:    Input Parameters:
    296: +  pc  - preconditioner context
    297: -  mat - projection null space matrix

    299:    Level: developer

    301: .seealso: PCDEFLATION
    302: @*/
    303: PetscErrorCode  PCDeflationSetProjectionNullSpaceMat(PC pc,Mat mat)
    304: {

    310:   PetscTryMethod(pc,"PCDeflationSetProjectionNullSpaceMat_C",(PC,Mat),(pc,mat));
    311:   return(0);
    312: }

    314: static PetscErrorCode PCDeflationSetCoarseMat_Deflation(PC pc,Mat mat)
    315: {
    316:   PC_Deflation     *def = (PC_Deflation*)pc->data;
    317:   PetscErrorCode   ierr;

    320:   PetscObjectReference((PetscObject)mat);
    321:   MatDestroy(&def->WtAW);
    322:   def->WtAW = mat;
    323:   PetscLogObjectParent((PetscObject)pc,(PetscObject)def->WtAW);
    324:   return(0);
    325: }

    327: /*@
    328:    PCDeflationSetCoarseMat - Set the coarse problem Mat.

    330:    Collective

    332:    Input Parameters:
    333: +  pc  - preconditioner context
    334: -  mat - coarse problem mat

    336:    Level: developer

    338: .seealso: PCDEFLATION
    339: @*/
    340: PetscErrorCode  PCDeflationSetCoarseMat(PC pc,Mat mat)
    341: {

    347:   PetscTryMethod(pc,"PCDeflationSetCoarseMat_C",(PC,Mat),(pc,mat));
    348:   return(0);
    349: }

    351: static PetscErrorCode PCDeflationGetCoarseKSP_Deflation(PC pc,KSP *ksp)
    352: {
    353:   PC_Deflation     *def = (PC_Deflation*)pc->data;

    356:   *ksp = def->WtAWinv;
    357:   return(0);
    358: }

    360: /*@
    361:    PCDeflationGetCoarseKSP - Returns the coarse problem KSP.

    363:    Not Collective

    365:    Input Parameters:
    366: .  pc - preconditioner context

    368:    Output Parameters:
    369: .  ksp - coarse problem KSP context

    371:    Level: advanced

    373: .seealso: PCDEFLATION
    374: @*/
    375: PetscErrorCode  PCDeflationGetCoarseKSP(PC pc,KSP *ksp)
    376: {

    382:   PetscTryMethod(pc,"PCDeflationGetCoarseKSP_C",(PC,KSP*),(pc,ksp));
    383:   return(0);
    384: }

    386: static PetscErrorCode PCDeflationGetPC_Deflation(PC pc,PC *apc)
    387: {
    388:   PC_Deflation   *def = (PC_Deflation*)pc->data;

    391:   *apc = def->pc;
    392:   return(0);
    393: }

    395: /*@
    396:    PCDeflationGetPC - Returns the additional preconditioner M^{-1}.

    398:    Not Collective

    400:    Input Parameters:
    401: .  pc  - the preconditioner context

    403:    Output Parameters:
    404: .  apc - additional preconditioner

    406:    Level: advanced

    408: .seealso: PCDEFLATION
    409: @*/
    410: PetscErrorCode PCDeflationGetPC(PC pc,PC *apc)
    411: {

    417:   PetscTryMethod(pc,"PCDeflationGetPC_C",(PC,PC*),(pc,apc));
    418:   return(0);
    419: }

    421: /*
    422:   x <- x + W*(W'*A*W)^{-1}*W'*r  = x + Q*r
    423: */
    424: static PetscErrorCode PCPreSolve_Deflation(PC pc,KSP ksp,Vec b, Vec x)
    425: {
    426:   PC_Deflation     *def = (PC_Deflation*)pc->data;
    427:   Mat              A;
    428:   Vec              r,w1,w2;
    429:   PetscBool        nonzero;
    430:   PetscErrorCode   ierr;

    433:   w1 = def->workcoarse[0];
    434:   w2 = def->workcoarse[1];
    435:   r  = def->work;
    436:   PCGetOperators(pc,NULL,&A);

    438:   KSPGetInitialGuessNonzero(ksp,&nonzero);
    439:   KSPSetInitialGuessNonzero(ksp,PETSC_TRUE);
    440:   if (nonzero) {
    441:     MatMult(A,x,r);                          /*    r  <- b - Ax              */
    442:     VecAYPX(r,-1.0,b);
    443:   } else {
    444:     VecCopy(b,r);                            /*    r  <- b (x is 0)          */
    445:   }

    447:   if (def->Wt) {
    448:     MatMult(def->Wt,r,w1);                   /*    w1 <- W'*r                */
    449:   } else {
    450:     MatMultHermitianTranspose(def->W,r,w1);  /*    w1 <- W'*r                */
    451:   }
    452:   KSPSolve(def->WtAWinv,w1,w2);              /*    w2 <- (W'*A*W)^{-1}*w1    */
    453:   MatMult(def->W,w2,r);                      /*    r  <- W*w2                */
    454:   VecAYPX(x,1.0,r);
    455:   return(0);
    456: }

    458: /*
    459:   if (def->correct) {
    460:     z <- M^{-1}r - W*(W'*A*W)^{-1}*(W'*A*M^{-1}r - l*W'*r) = (P*M^{-1} + l*Q)*r
    461:   } else {
    462:     z <- M^{-1}*r - W*(W'*A*W)^{-1}*W'*A*M{-1}*r = P*M^{-1}*r
    463:   }
    464: */
    465: static PetscErrorCode PCApply_Deflation(PC pc,Vec r,Vec z)
    466: {
    467:   PC_Deflation     *def = (PC_Deflation*)pc->data;
    468:   Mat              A;
    469:   Vec              u,w1,w2;
    470:   PetscErrorCode   ierr;

    473:   w1 = def->workcoarse[0];
    474:   w2 = def->workcoarse[1];
    475:   u  = def->work;
    476:   PCGetOperators(pc,NULL,&A);

    478:   PCApply(def->pc,r,z);                          /*    z <- M^{-1}*r             */
    479:   if (!def->init) {
    480:     MatMult(def->WtA,z,w1);                      /*    w1 <- W'*A*z              */
    481:     if (def->correct) {
    482:       if (def->Wt) {
    483:         MatMult(def->Wt,r,w2);                   /*    w2 <- W'*r                */
    484:       } else {
    485:         MatMultHermitianTranspose(def->W,r,w2);  /*    w2 <- W'*r                */
    486:       }
    487:       VecAXPY(w1,-1.0*def->correctfact,w2);      /*    w1 <- w1 - l*w2           */
    488:     }
    489:     KSPSolve(def->WtAWinv,w1,w2);                /*    w2 <- (W'*A*W)^{-1}*w1    */
    490:     MatMult(def->W,w2,u);                        /*    u  <- W*w2                */
    491:     VecAXPY(z,-1.0,u);                           /*    z  <- z - u               */
    492:   }
    493:   return(0);
    494: }

    496: static PetscErrorCode PCSetUp_Deflation(PC pc)
    497: {
    498:   PC_Deflation     *def = (PC_Deflation*)pc->data;
    499:   KSP              innerksp;
    500:   PC               pcinner;
    501:   Mat              Amat,nextDef=NULL,*mats;
    502:   PetscInt         i,m,red,size;
    503:   PetscMPIInt      commsize;
    504:   PetscBool        match,flgspd,transp=PETSC_FALSE;
    505:   MatCompositeType ctype;
    506:   MPI_Comm         comm;
    507:   char             prefix[128]="";
    508:   PetscErrorCode   ierr;

    511:   if (pc->setupcalled) return(0);
    512:   PetscObjectGetComm((PetscObject)pc,&comm);
    513:   PCGetOperators(pc,NULL,&Amat);
    514:   if (!def->lvl && !def->prefix) {
    515:     PCGetOptionsPrefix(pc,&def->prefix);
    516:   }
    517:   if (def->lvl) {
    518:     PetscSNPrintf(prefix,sizeof(prefix),"%d_",(int)def->lvl);
    519:   }

    521:   /* compute a deflation space */
    522:   if (def->W || def->Wt) {
    523:     def->spacetype = PC_DEFLATION_SPACE_USER;
    524:   } else {
    525:     PCDeflationComputeSpace(pc);
    526:   }

    528:   /* nested deflation */
    529:   if (def->W) {
    530:     PetscObjectTypeCompare((PetscObject)def->W,MATCOMPOSITE,&match);
    531:     if (match) {
    532:       MatCompositeGetType(def->W,&ctype);
    533:       MatCompositeGetNumberMat(def->W,&size);
    534:     }
    535:   } else {
    536:     MatCreateHermitianTranspose(def->Wt,&def->W);
    537:     PetscObjectTypeCompare((PetscObject)def->Wt,MATCOMPOSITE,&match);
    538:     if (match) {
    539:       MatCompositeGetType(def->Wt,&ctype);
    540:       MatCompositeGetNumberMat(def->Wt,&size);
    541:     }
    542:     transp = PETSC_TRUE;
    543:   }
    544:   if (match && ctype == MAT_COMPOSITE_MULTIPLICATIVE) {
    545:     if (!transp) {
    546:       if (def->lvl < def->maxlvl) {
    547:         PetscMalloc1(size,&mats);
    548:         for (i=0; i<size; i++) {
    549:           MatCompositeGetMat(def->W,i,&mats[i]);
    550:         }
    551:         size -= 1;
    552:         MatDestroy(&def->W);
    553:         def->W = mats[size];
    554:         PetscObjectReference((PetscObject)mats[size]);
    555:         if (size > 1) {
    556:           MatCreateComposite(comm,size,mats,&nextDef);
    557:           MatCompositeSetType(nextDef,MAT_COMPOSITE_MULTIPLICATIVE);
    558:         } else {
    559:           nextDef = mats[0];
    560:           PetscObjectReference((PetscObject)mats[0]);
    561:         }
    562:         PetscFree(mats);
    563:       } else {
    564:         /* TODO test merge side performance */
    565:         /* MatCompositeSetMergeType(def->W,MAT_COMPOSITE_MERGE_LEFT); */
    566:         MatCompositeMerge(def->W);
    567:       }
    568:     } else {
    569:       if (def->lvl < def->maxlvl) {
    570:         PetscMalloc1(size,&mats);
    571:         for (i=0; i<size; i++) {
    572:           MatCompositeGetMat(def->Wt,i,&mats[i]);
    573:         }
    574:         size -= 1;
    575:         MatDestroy(&def->Wt);
    576:         def->Wt = mats[0];
    577:         PetscObjectReference((PetscObject)mats[0]);
    578:         if (size > 1) {
    579:           MatCreateComposite(comm,size,&mats[1],&nextDef);
    580:           MatCompositeSetType(nextDef,MAT_COMPOSITE_MULTIPLICATIVE);
    581:         } else {
    582:           nextDef = mats[1];
    583:           PetscObjectReference((PetscObject)mats[1]);
    584:         }
    585:         PetscFree(mats);
    586:       } else {
    587:         /* MatCompositeSetMergeType(def->W,MAT_COMPOSITE_MERGE_LEFT); */
    588:         MatCompositeMerge(def->Wt);
    589:       }
    590:     }
    591:   }

    593:   if (transp) {
    594:     MatDestroy(&def->W);
    595:     MatHermitianTranspose(def->Wt,MAT_INITIAL_MATRIX,&def->W);
    596:   }

    598:   /* assemble WtA */
    599:   if (!def->WtA) {
    600:     if (def->Wt) {
    601:       MatMatMult(def->Wt,Amat,MAT_INITIAL_MATRIX,PETSC_DEFAULT,&def->WtA);
    602:     } else {
    603: #if defined(PETSC_USE_COMPLEX)
    604:       MatHermitianTranspose(def->W,MAT_INITIAL_MATRIX,&def->Wt);
    605:       MatMatMult(def->Wt,Amat,MAT_INITIAL_MATRIX,PETSC_DEFAULT,&def->WtA);
    606: #else
    607:       MatTransposeMatMult(def->W,Amat,MAT_INITIAL_MATRIX,PETSC_DEFAULT,&def->WtA);
    608: #endif
    609:     }
    610:   }
    611:   /* setup coarse problem */
    612:   if (!def->WtAWinv) {
    613:     MatGetSize(def->W,NULL,&m);
    614:     if (!def->WtAW) {
    615:       MatMatMult(def->WtA,def->W,MAT_INITIAL_MATRIX,PETSC_DEFAULT,&def->WtAW);
    616:       /* TODO create MatInheritOption(Mat,MatOption) */
    617:       MatGetOption(Amat,MAT_SPD,&flgspd);
    618:       MatSetOption(def->WtAW,MAT_SPD,flgspd);
    619:       if (PetscDefined(USE_DEBUG)) {
    620:         /* Check columns of W are not in kernel of A */
    621:         PetscReal *norms;
    622:         PetscMalloc1(m,&norms);
    623:         MatGetColumnNorms(def->WtAW,NORM_INFINITY,norms);
    624:         for (i=0; i<m; i++) {
    625:           if (norms[i] < 100*PETSC_MACHINE_EPSILON) {
    626:             SETERRQ1(comm,PETSC_ERR_SUP,"Column %D of W is in kernel of A.",i);
    627:           }
    628:         }
    629:         PetscFree(norms);
    630:       }
    631:     } else {
    632:       MatGetOption(def->WtAW,MAT_SPD,&flgspd);
    633:     }
    634:     /* TODO use MATINV ? */
    635:     KSPCreate(comm,&def->WtAWinv);
    636:     KSPSetOperators(def->WtAWinv,def->WtAW,def->WtAW);
    637:     KSPGetPC(def->WtAWinv,&pcinner);
    638:     /* Setup KSP and PC */
    639:     if (nextDef) { /* next level for multilevel deflation */
    640:       innerksp = def->WtAWinv;
    641:       /* set default KSPtype */
    642:       if (!def->ksptype) {
    643:         def->ksptype = KSPFGMRES;
    644:         if (flgspd) { /* SPD system */
    645:           def->ksptype = KSPFCG;
    646:         }
    647:       }
    648:       KSPSetType(innerksp,def->ksptype); /* TODO iherit from KSP + tolerances */
    649:       PCSetType(pcinner,PCDEFLATION); /* TODO create coarse preconditinoner M_c = WtMW ? */
    650:       PCDeflationSetSpace(pcinner,nextDef,transp);
    651:       PCDeflationSetLevels_Deflation(pcinner,def->lvl+1,def->maxlvl);
    652:       /* inherit options */
    653:       if (def->prefix) ((PC_Deflation*)(pcinner->data))->prefix = def->prefix;
    654:       ((PC_Deflation*)(pcinner->data))->init          = def->init;
    655:       ((PC_Deflation*)(pcinner->data))->ksptype       = def->ksptype;
    656:       ((PC_Deflation*)(pcinner->data))->correct       = def->correct;
    657:       ((PC_Deflation*)(pcinner->data))->correctfact   = def->correctfact;
    658:       ((PC_Deflation*)(pcinner->data))->reductionfact = def->reductionfact;
    659:       MatDestroy(&nextDef);
    660:     } else { /* the last level */
    661:       KSPSetType(def->WtAWinv,KSPPREONLY);
    662:       PCSetType(pcinner,PCTELESCOPE);
    663:       /* do not overwrite PCTELESCOPE */
    664:       if (def->prefix) {
    665:         KSPSetOptionsPrefix(def->WtAWinv,def->prefix);
    666:       }
    667:       KSPAppendOptionsPrefix(def->WtAWinv,"deflation_tel_");
    668:       PCSetFromOptions(pcinner);
    669:       PetscObjectTypeCompare((PetscObject)pcinner,PCTELESCOPE,&match);
    670:       if (!match) SETERRQ(comm,PETSC_ERR_SUP,"User can not owerwrite PCTELESCOPE on bottom level, use reduction factor = 1 instead.");
    671:       /* Reduction factor choice */
    672:       red = def->reductionfact;
    673:       if (red < 0) {
    674:         MPI_Comm_size(comm,&commsize);
    675:         red  = ceil((float)commsize/ceil((float)m/commsize));
    676:         PetscObjectTypeCompareAny((PetscObject)(def->WtAW),&match,MATSEQDENSE,MATMPIDENSE,MATDENSE,"");
    677:         if (match) red = commsize;
    678:         PetscInfo1(pc,"Auto choosing reduction factor %D\n",red);
    679:       }
    680:       PCTelescopeSetReductionFactor(pcinner,red);
    681:       PCSetUp(pcinner);
    682:       PCTelescopeGetKSP(pcinner,&innerksp);
    683:       if (innerksp) {
    684:         KSPGetPC(innerksp,&pcinner);
    685:         PCSetType(pcinner,PCLU);
    686: #if defined(PETSC_HAVE_SUPERLU)
    687:         MatGetFactorAvailable(def->WtAW,MATSOLVERSUPERLU,MAT_FACTOR_LU,&match);
    688:         if (match) {
    689:           PCFactorSetMatSolverType(pcinner,MATSOLVERSUPERLU);
    690:         }
    691: #endif
    692: #if defined(PETSC_HAVE_SUPERLU_DIST)
    693:         MatGetFactorAvailable(def->WtAW,MATSOLVERSUPERLU_DIST,MAT_FACTOR_LU,&match);
    694:         if (match) {
    695:           PCFactorSetMatSolverType(pcinner,MATSOLVERSUPERLU_DIST);
    696:         }
    697: #endif
    698:       }
    699:     }

    701:     if (innerksp) {
    702:       if (def->prefix) {
    703:         KSPSetOptionsPrefix(innerksp,def->prefix);
    704:         KSPAppendOptionsPrefix(innerksp,"deflation_");
    705:       } else {
    706:         KSPSetOptionsPrefix(innerksp,"deflation_");
    707:       }
    708:       KSPAppendOptionsPrefix(innerksp,prefix);
    709:       KSPSetFromOptions(innerksp);
    710:       KSPSetUp(innerksp);
    711:     }
    712:   }
    713:   KSPSetFromOptions(def->WtAWinv);
    714:   KSPSetUp(def->WtAWinv);

    716:   /* create preconditioner */
    717:   if (!def->pc) {
    718:     PCCreate(comm,&def->pc);
    719:     PCSetOperators(def->pc,Amat,Amat);
    720:     PCSetType(def->pc,PCNONE);
    721:     if (def->prefix) {
    722:       PCSetOptionsPrefix(def->pc,def->prefix);
    723:     }
    724:     PCAppendOptionsPrefix(def->pc,"deflation_");
    725:     PCAppendOptionsPrefix(def->pc,prefix);
    726:     PCAppendOptionsPrefix(def->pc,"pc_");
    727:     PCSetFromOptions(def->pc);
    728:     PCSetUp(def->pc);
    729:   }

    731:   /* create work vecs */
    732:   MatCreateVecs(Amat,NULL,&def->work);
    733:   KSPCreateVecs(def->WtAWinv,2,&def->workcoarse,0,NULL);
    734:   return(0);
    735: }

    737: static PetscErrorCode PCReset_Deflation(PC pc)
    738: {
    739:   PC_Deflation      *def = (PC_Deflation*)pc->data;
    740:   PetscErrorCode    ierr;

    743:   VecDestroy(&def->work);
    744:   VecDestroyVecs(2,&def->workcoarse);
    745:   MatDestroy(&def->W);
    746:   MatDestroy(&def->Wt);
    747:   MatDestroy(&def->WtA);
    748:   MatDestroy(&def->WtAW);
    749:   KSPDestroy(&def->WtAWinv);
    750:   PCDestroy(&def->pc);
    751:   return(0);
    752: }

    754: static PetscErrorCode PCDestroy_Deflation(PC pc)
    755: {

    759:   PCReset_Deflation(pc);
    760:   PetscFree(pc->data);
    761:   return(0);
    762: }

    764: static PetscErrorCode PCView_Deflation(PC pc,PetscViewer viewer)
    765: {
    766:   PC_Deflation      *def = (PC_Deflation*)pc->data;
    767:   PetscInt          its;
    768:   PetscBool         iascii;
    769:   PetscErrorCode    ierr;

    772:   PetscObjectTypeCompare((PetscObject)viewer,PETSCVIEWERASCII,&iascii);
    773:   if (iascii) {
    774:     if (def->correct) {
    775:       PetscViewerASCIIPrintf(viewer,"using CP correction, factor = %g+%gi\n",
    776:                                     (double)PetscRealPart(def->correctfact),
    777:                                     (double)PetscImaginaryPart(def->correctfact));
    778:     }
    779:     if (!def->lvl) {
    780:       PetscViewerASCIIPrintf(viewer,"deflation space type: %s\n",PCDeflationSpaceTypes[def->spacetype]);
    781:     }

    783:     PetscViewerASCIIPrintf(viewer,"--- Additional PC:\n");
    784:     PetscViewerASCIIPushTab(viewer);
    785:     PCView(def->pc,viewer);
    786:     PetscViewerASCIIPopTab(viewer);

    788:     PetscViewerASCIIPrintf(viewer,"--- Coarse problem solver:\n");
    789:     PetscViewerASCIIPushTab(viewer);
    790:     KSPGetTotalIterations(def->WtAWinv,&its);
    791:     PetscViewerASCIIPrintf(viewer,"total number of iterations: %D\n",its);
    792:     KSPView(def->WtAWinv,viewer);
    793:     PetscViewerASCIIPopTab(viewer);
    794:   }
    795:   return(0);
    796: }

    798: static PetscErrorCode PCSetFromOptions_Deflation(PetscOptionItems *PetscOptionsObject,PC pc)
    799: {
    800:   PC_Deflation      *def = (PC_Deflation*)pc->data;
    801:   PetscErrorCode    ierr;

    804:   PetscOptionsHead(PetscOptionsObject,"Deflation options");
    805:   PetscOptionsBool("-pc_deflation_init_only","Use only initialization step - Initdef","PCDeflationSetInitOnly",def->init,&def->init,NULL);
    806:   PetscOptionsInt("-pc_deflation_levels","Maximum of deflation levels","PCDeflationSetLevels",def->maxlvl,&def->maxlvl,NULL);
    807:   PetscOptionsInt("-pc_deflation_reduction_factor","Reduction factor for coarse problem solution using PCTELESCOPE","PCDeflationSetReductionFactor",def->reductionfact,&def->reductionfact,NULL);
    808:   PetscOptionsBool("-pc_deflation_correction","Add coarse problem correction Q to P","PCDeflationSetCorrectionFactor",def->correct,&def->correct,NULL);
    809:   PetscOptionsScalar("-pc_deflation_correction_factor","Set multiple of Q to use as coarse problem correction","PCDeflationSetCorrectionFactor",def->correctfact,&def->correctfact,NULL);
    810:   PetscOptionsEnum("-pc_deflation_compute_space","Compute deflation space","PCDeflationSetSpace",PCDeflationSpaceTypes,(PetscEnum)def->spacetype,(PetscEnum*)&def->spacetype,NULL);
    811:   PetscOptionsInt("-pc_deflation_compute_space_size","Set size of the deflation space to compute","PCDeflationSetSpace",def->spacesize,&def->spacesize,NULL);
    812:   PetscOptionsBool("-pc_deflation_space_extend","Extend deflation space instead of truncating (wavelets)","PCDeflation",def->extendsp,&def->extendsp,NULL);
    813:   PetscOptionsTail();
    814:   return(0);
    815: }

    817: /*MC
    818:    PCDEFLATION - Deflation preconditioner shifts (deflates) part of the spectrum to zero or to a predefined value.

    820:    Options Database Keys:
    821: +    -pc_deflation_init_only          <false> - if true computes only the special guess
    822: .    -pc_deflation_max_lvl            <0>     - maximum number of levels for multilevel deflation
    823: .    -pc_deflation_reduction_factor <\-1>     - reduction factor on bottom level coarse problem for PCTELESCOPE (default based on the size of the coarse problem)
    824: .    -pc_deflation_correction         <false> - if true apply coarse problem correction
    825: .    -pc_deflation_correction_factor  <1.0>   - sets coarse problem correction factor
    826: .    -pc_deflation_compute_space      <haar>  - compute PCDeflationSpaceType deflation space
    827: -    -pc_deflation_compute_space_size <1>     - size of the deflation space (corresponds to number of levels for wavelet-based deflation)

    829:    Notes:
    830:     Given a (complex - transpose is always Hermitian) full rank deflation matrix W, the deflation (introduced in [1,2])
    831:     preconditioner uses projections Q = W*(W'*A*W)^{-1}*W' and P = I - Q*A, where A is pmat.

    833:     The deflation computes initial guess x0 = x_{-1} - Q*r_{-1}, which is the solution on the deflation space.
    834:     If PCDeflationSetInitOnly() or -pc_deflation_init_only is set to PETSC_TRUE (InitDef scheme), the application of the
    835:     preconditioner consists only of application of the additional preconditioner M^{-1}. Otherwise, the preconditioner
    836:     application consists of P*M^{-1} + factor*Q. The first part of the preconditioner (PM^{-1}) shifts some eigenvalues
    837:     to zero while the addition of the coarse problem correction (factor*Q) makes the preconditioner to shift some
    838:     eigenvalues to the given factor. The InitDef scheme is recommended for deflation using high accuracy estimates
    839:     of eigenvectors of A when it exhibits similar convergence to the full deflation but is cheaper.

    841:     The deflation matrix is by default automatically computed. The type of deflation matrix and its size to compute can
    842:     be controlled by PCDeflationSetSpaceToCompute() or -pc_deflation_compute_space and -pc_deflation_compute_space_size.
    843:     User can set an arbitrary deflation space matrix with PCDeflationSetSpace(). If the deflation matrix
    844:     is a multiplicative MATCOMPOSITE, a multilevel deflation [3] is used. The first matrix in the composite is used as the
    845:     deflation matrix, and the coarse problem (W'*A*W)^{-1} is solved by KSPFCG (if A is MAT_SPD) or KSPFGMRES preconditioned
    846:     by deflation with deflation matrix being the next matrix in the MATCOMPOSITE. This scheme repeats until the maximum
    847:     level is reached or there are no more matrices. If the maximum level is reached, the remaining matrices are merged
    848:     (multiplied) to create the last deflation matrix. The maximum level defaults to 0 and can be set by
    849:     PCDeflationSetLevels() or by -pc_deflation_levels.

    851:     The coarse problem KSP can be controlled from the command line with prefix -deflation_ for the first level and -deflation_[lvl-1]
    852:     from the second level onward. You can also use
    853:     PCDeflationGetCoarseKSP() to control it from code. The bottom level KSP defaults to
    854:     KSPPREONLY with PCLU direct solver (MATSOLVERSUPERLU/MATSOLVERSUPERLU_DIST if available) wrapped into PCTELESCOPE.
    855:     For convenience, the reduction factor can be set by PCDeflationSetReductionFactor()
    856:     or -pc_deflation_recduction_factor. The default is chosen heuristically based on the coarse problem size.

    858:     The additional preconditioner can be controlled from command line with prefix -deflation_[lvl]_pc (same rules used for
    859:     coarse problem KSP apply for [lvl]_ part of prefix), e.g., -deflation_1_pc_pc_type bjacobi. You can also use
    860:     PCDeflationGetPC() to control the additional preconditioner from code. It defaults to PCNONE.

    862:     The coarse problem correction term (factor*Q) can be turned on by -pc_deflation_correction and the factor value can
    863:     be set by pc_deflation_correction_factor or by PCDeflationSetCorrectionFactor(). The coarse problem can
    864:     significantly improve convergence when the deflation coarse problem is not solved with high enough accuracy. We
    865:     recommend setting factor to some eigenvalue, e.g., the largest eigenvalue so that the preconditioner does not create
    866:     an isolated eigenvalue.

    868:     The options are automatically inherited from the previous deflation level.

    870:     The preconditioner supports KSPMonitorDynamicTolerance(). This is useful for the multilevel scheme for which we also
    871:     recommend limiting the number of iterations for the coarse problems.

    873:     See section 3 of [4] for additional references and decription of the algorithm when used for conjugate gradients.
    874:     Section 4 describes some possible choices for the deflation space.

    876:    Developer Notes:
    877:      Contributed by Jakub Kruzik (PERMON), Institute of Geonics of the Czech
    878:      Academy of Sciences and VSB - TU Ostrava.

    880:      Developed from PERMON code used in [4] while on a research stay with
    881:      Prof. Reinhard Nabben at the Institute of Mathematics, TU Berlin.

    883:    References:
    884: +    [1] - A. Nicolaides. "Deflation of conjugate gradients with applications to boundary value problems", SIAM J. Numer. Anal. 24.2, 1987.
    885: .    [2] - Z. Dostal. "Conjugate gradient method with preconditioning by projector", Int J. Comput. Math. 23.3-4, 1988.
    886: .    [3] - Y. A. Erlangga and R. Nabben. "Multilevel Projection-Based Nested Krylov Iteration for Boundary Value Problems", SIAM J. Sci. Comput. 30.3, 2008.
    887: -    [4] - J. Kruzik "Implementation of the Deflated Variants of the Conjugate Gradient Method", Master's thesis, VSB-TUO, 2018 - http://dspace5.vsb.cz/bitstream/handle/10084/130303/KRU0097_USP_N2658_2612T078_2018.pdf

    889:    Level: intermediate

    891: .seealso:  PCCreate(), PCSetType(), PCType (for list of available types), PC,
    892:            PCDeflationSetInitOnly(), PCDeflationSetLevels(), PCDeflationSetReductionFactor(),
    893:            PCDeflationSetCorrectionFactor(), PCDeflationSetSpaceToCompute(),
    894:            PCDeflationSetSpace(), PCDeflationSpaceType, PCDeflationSetProjectionNullSpaceMat(),
    895:            PCDeflationSetCoarseMat(), PCDeflationGetCoarseKSP(), PCDeflationGetPC()
    896: M*/

    898: PETSC_EXTERN PetscErrorCode PCCreate_Deflation(PC pc)
    899: {
    900:   PC_Deflation   *def;

    904:   PetscNewLog(pc,&def);
    905:   pc->data = (void*)def;

    907:   def->init          = PETSC_FALSE;
    908:   def->correct       = PETSC_FALSE;
    909:   def->correctfact   = 1.0;
    910:   def->reductionfact = -1;
    911:   def->spacetype     = PC_DEFLATION_SPACE_HAAR;
    912:   def->spacesize     = 1;
    913:   def->extendsp      = PETSC_FALSE;
    914:   def->lvl           = 0;
    915:   def->maxlvl        = 0;
    916:   def->W             = NULL;
    917:   def->Wt            = NULL;

    919:   pc->ops->apply          = PCApply_Deflation;
    920:   pc->ops->presolve       = PCPreSolve_Deflation;
    921:   pc->ops->setup          = PCSetUp_Deflation;
    922:   pc->ops->reset          = PCReset_Deflation;
    923:   pc->ops->destroy        = PCDestroy_Deflation;
    924:   pc->ops->setfromoptions = PCSetFromOptions_Deflation;
    925:   pc->ops->view           = PCView_Deflation;

    927:   PetscObjectComposeFunction((PetscObject)pc,"PCDeflationSetInitOnly_C",PCDeflationSetInitOnly_Deflation);
    928:   PetscObjectComposeFunction((PetscObject)pc,"PCDeflationSetLevels_C",PCDeflationSetLevels_Deflation);
    929:   PetscObjectComposeFunction((PetscObject)pc,"PCDeflationSetReductionFactor_C",PCDeflationSetReductionFactor_Deflation);
    930:   PetscObjectComposeFunction((PetscObject)pc,"PCDeflationSetCorrectionFactor_C",PCDeflationSetCorrectionFactor_Deflation);
    931:   PetscObjectComposeFunction((PetscObject)pc,"PCDeflationSetSpaceToCompute_C",PCDeflationSetSpaceToCompute_Deflation);
    932:   PetscObjectComposeFunction((PetscObject)pc,"PCDeflationSetSpace_C",PCDeflationSetSpace_Deflation);
    933:   PetscObjectComposeFunction((PetscObject)pc,"PCDeflationSetProjectionNullSpaceMat_C",PCDeflationSetProjectionNullSpaceMat_Deflation);
    934:   PetscObjectComposeFunction((PetscObject)pc,"PCDeflationSetCoarseMat_C",PCDeflationSetCoarseMat_Deflation);
    935:   PetscObjectComposeFunction((PetscObject)pc,"PCDeflationGetCoarseKSP_C",PCDeflationGetCoarseKSP_Deflation);
    936:   PetscObjectComposeFunction((PetscObject)pc,"PCDeflationGetPC_C",PCDeflationGetPC_Deflation);
    937:   return(0);
    938: }