PXLSSQ(1)

NAME
pxlssq - Print sequence file summary

SYNOPSIS
pxlssq [OPTION]...

DESCRIPTION
Print sequence file summary By default returns all properties. Alternatively choose 1 property. This will take fasta, phylip or nexus file formats

-s, --seqf=FILE
    input seq file, stdin otherwise

-i, --indiv
    output stats for individual sequences

-n, --nseq
    return the number of sequences

-c, --nchar
    return the number of characters (only if aligned) - for unaligned seqs, use with -i flag

-l, --labels
    return all taxon labels (one per line)

-p, --prot
    force interpret as protein (if inference fails)

-a, --aligned
    return whether sequences are aligned (same length)

-f, --freqs
    return character state frequencies

-o, --outf=FILE
    output stats file, stout otherwise

-h, --help
    display this help and exit

-V, --version
    display version and exit

REPORTING BUGS
Report bugs to: <https://github.com/FePhyFoFum/phyx/issues> phyx home page: <https://github.com/FePhyFoFum/phyx>

AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.