@HD	VN:1.0	SO:coordinate
@SQ	SN:chrM	LN:16571	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:d2ed829b8a1628d16cbeee88e88e39eb	SP:Homo sapiens
@SQ	SN:chr1	LN:247249719	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:9ebc6df9496613f373e73396d5b3b6b6	SP:Homo sapiens
@SQ	SN:chr2	LN:242951149	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:b12c7373e3882120332983be99aeb18d	SP:Homo sapiens
@SQ	SN:chr3	LN:199501827	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:0e48ed7f305877f66e6fd4addbae2b9a	SP:Homo sapiens
@SQ	SN:chr4	LN:191273063	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:cf37020337904229dca8401907b626c2	SP:Homo sapiens
@SQ	SN:chr5	LN:180857866	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:031c851664e31b2c17337fd6f9004858	SP:Homo sapiens
@SQ	SN:chr6	LN:170899992	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:bfe8005c536131276d448ead33f1b583	SP:Homo sapiens
@SQ	SN:chr7	LN:158821424	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:74239c5ceee3b28f0038123d958114cb	SP:Homo sapiens
@SQ	SN:chr8	LN:146274826	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:1eb00fe1ce26ce6701d2cd75c35b5ccb	SP:Homo sapiens
@SQ	SN:chr9	LN:140273252	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:ea244473e525dde0393d353ef94f974b	SP:Homo sapiens
@SQ	SN:chr10	LN:135374737	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:4ca41bf2d7d33578d2cd7ee9411e1533	SP:Homo sapiens
@SQ	SN:chr11	LN:134452384	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:425ba5eb6c95b60bafbf2874493a56c3	SP:Homo sapiens
@SQ	SN:chr12	LN:132349534	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:d17d70060c56b4578fa570117bf19716	SP:Homo sapiens
@SQ	SN:chr13	LN:114142980	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:c4f3084a20380a373bbbdb9ae30da587	SP:Homo sapiens
@SQ	SN:chr14	LN:106368585	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:c1ff5d44683831e9c7c1db23f93fbb45	SP:Homo sapiens
@SQ	SN:chr15	LN:100338915	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:5cd9622c459fe0a276b27f6ac06116d8	SP:Homo sapiens
@SQ	SN:chr16	LN:88827254	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:3e81884229e8dc6b7f258169ec8da246	SP:Homo sapiens
@SQ	SN:chr17	LN:78774742	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:2a5c95ed99c5298bb107f313c7044588	SP:Homo sapiens
@SQ	SN:chr18	LN:76117153	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:3d11df432bcdc1407835d5ef2ce62634	SP:Homo sapiens
@SQ	SN:chr19	LN:63811651	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:2f1a59077cfad51df907ac25723bff28	SP:Homo sapiens
@SQ	SN:chr20	LN:62435964	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:f126cdf8a6e0c7f379d618ff66beb2da	SP:Homo sapiens
@SQ	SN:chr21	LN:46944323	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:f1b74b7f9f4cdbaeb6832ee86cb426c6	SP:Homo sapiens
@SQ	SN:chr22	LN:49691432	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:2041e6a0c914b48dd537922cca63acb8	SP:Homo sapiens
@SQ	SN:chrX	LN:154913754	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:d7e626c80ad172a4d7c95aadb94d9040	SP:Homo sapiens
@SQ	SN:chrY	LN:57772954	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:62f69d0e82a12af74bad85e2e4a8bd91	SP:Homo sapiens
@SQ	SN:chr1_random	LN:1663265	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:cc05cb1554258add2eb62e88c0746394	SP:Homo sapiens
@SQ	SN:chr2_random	LN:185571	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:18ceab9e4667a25c8a1f67869a4356ea	SP:Homo sapiens
@SQ	SN:chr3_random	LN:749256	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:9cc571e918ac18afa0b2053262cadab6	SP:Homo sapiens
@SQ	SN:chr4_random	LN:842648	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:9cab2949ccf26ee0f69a875412c93740	SP:Homo sapiens
@SQ	SN:chr5_random	LN:143687	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:05926bdbff978d4a0906862eb3f773d0	SP:Homo sapiens
@SQ	SN:chr6_random	LN:1875562	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:d62eb2919ba7b9c1d382c011c5218094	SP:Homo sapiens
@SQ	SN:chr7_random	LN:549659	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:28ebfb89c858edbc4d71ff3f83d52231	SP:Homo sapiens
@SQ	SN:chr8_random	LN:943810	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:0ed5b088d843d6f6e6b181465b9e82ed	SP:Homo sapiens
@SQ	SN:chr9_random	LN:1146434	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:1e3d2d2f141f0550fa28a8d0ed3fd1cf	SP:Homo sapiens
@SQ	SN:chr10_random	LN:113275	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:50be2d2c6720dabeff497ffb53189daa	SP:Homo sapiens
@SQ	SN:chr11_random	LN:215294	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:bfc93adc30c621d5c83eee3f0d841624	SP:Homo sapiens
@SQ	SN:chr13_random	LN:186858	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:563531689f3dbd691331fd6c5730a88b	SP:Homo sapiens
@SQ	SN:chr15_random	LN:784346	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:bf885e99940d2d439d83eba791804a48	SP:Homo sapiens
@SQ	SN:chr16_random	LN:105485	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:dd06ea813a80b59d9c626b31faf6ae7f	SP:Homo sapiens
@SQ	SN:chr17_random	LN:2617613	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:34d5e2005dffdfaaced1d34f60ed8fc2	SP:Homo sapiens
@SQ	SN:chr18_random	LN:4262	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:f3814841f1939d3ca19072d9e89f3fd7	SP:Homo sapiens
@SQ	SN:chr19_random	LN:301858	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:420ce95da035386cc8c63094288c49e2	SP:Homo sapiens
@SQ	SN:chr21_random	LN:1679693	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:a7252115bfe5bb5525f34d039eecd096	SP:Homo sapiens
@SQ	SN:chr22_random	LN:257318	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:4f2d259b82f7647d3b668063cf18378b	SP:Homo sapiens
@SQ	SN:chrX_random	LN:1719168	AS:HG18	UR:/seq/references/Homo_sapiens_assembly18/v0/Homo_sapiens_assembly18.fasta	M5:f4d71e0758986c15e5455bf3e14e5d6f	SP:Homo sapiens
#CHROMOSOME	POSITION	NAME	MAJOR_ALLELE	MINOR_ALLELE	MAF	ANCHOR_SNP	PANELS
chr1	13900000	rs1	T	C	0.159601		foo
chr1	14600000	rs2	A	G	0.223794		foo
chr2	80000000	rs3	A	G	0.437188		foo
chr2	67000000	rs4	G	A	0.447215		foo
chr2	223500000	rs5	C	A	0.605985		foo
chr3	17000000	rs6	C	T	0.623026		foo
chr3	37600000	rs7	T	C	0.740000	rs8	foo
chr3	37600100	rs8	T	C	0.736301		
chr3	153300000	rs9	T	A	0.722731		foo
chr4	26700000	rs10	T	G	0.205686		foo
chr5	88400000	rs11	C	T	0.558528		foo
chr6	79400000	rs12	T	C	0.212500	rs13	
chr6	79400200	rs13	C	A	0.258333		
chr6	79400600	rs14	A	G	0.256803	rs13	foo
chr6	153300000	rs15	T	A	0.452579		foo
chr7	86800000	rs16	A	G	0.662917		foo
chr8	71100000	rs17	A	G	0.392887		foo
chr10	129000000	rs18	G	A	0.228188		foo
chr13	34100000	rs19	T	C	0.425957		foo
chr14	95100000	rs20	A	G	0.376667		foo
chr15	45600000	rs21	C	T	0.296296		foo
chr16	49600000	rs22	G	C	0.547421		foo
chr17	20700000	rs23	A	G	0.175000		foo
chr17	40400000	rs24	A	T	0.628333		foo
chr22	31500000	rs25	A	G	0.554863		foo
chrX	24000000	rs26	T	C	0.706000		foo
