python-cobra (0.26.2-1) unstable; urgency=medium

  * Team upload.
  * New upstream version 0.26.2
  * d/t/run-unit-test: avoid interfering with user's home.
  * d/python-cobra-data.lintian-overrides: update overrides.

 -- Étienne Mollier <emollier@debian.org>  Sun, 05 Feb 2023 22:14:10 +0100

python-cobra (0.26.0-3) unstable; urgency=medium

  * Team upload.
  * Standards-Version: 4.6.2 (routine-update)
  * Fix AttributeError: module 'numpy' has no attribute 'float'
    Closes: #1027252

 -- Andreas Tille <tille@debian.org>  Thu, 29 Dec 2022 13:03:36 +0100

python-cobra (0.26.0-2) UNRELEASED; urgency=medium

  * Team upload.

 -- Andreas Tille <tille@debian.org>  Thu, 29 Dec 2022 12:33:19 +0100

python-cobra (0.26.0-1) unstable; urgency=medium

  [ Étienne Mollier ]
  * Team upload.
  * New upstream version

  [ Andreas Tille ]
  * Build-Depends: python3-importlib-resources, python3-pytest-mock
  * Standards-Version: 4.6.1 (routine-update)
  * Ignore tests accessing remote locations
  * Fix watch file
  * Since python3-sbml5 can only deal with one Python3 version we
    restrict the test to default Python3

  [ Nilesh Patra ]
  * Add patch to fix build

 -- Andreas Tille <tille@debian.org>  Thu, 24 Nov 2022 09:06:25 +0100

python-cobra (0.23.0-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Standards-Version: 4.6.0 (routine-update)

 -- Andreas Tille <tille@debian.org>  Sat, 19 Feb 2022 08:53:02 +0100

python-cobra (0.22.1-1) unstable; urgency=medium

  * Team upload.
  * New upstream version

 -- Nilesh Patra <nilesh@debian.org>  Mon, 23 Aug 2021 00:54:10 +0530

python-cobra (0.22.0-1) unstable; urgency=medium

  * Team Upload.
  * New upstream version 0.22.0
  * Refresh patches

 -- Nilesh Patra <nilesh@debian.org>  Sun, 15 Aug 2021 19:37:28 +0530

python-cobra (0.21.0-1) unstable; urgency=high

  * Team upload.
  * New upstream version
    Closes: #978032
  * Standards-Version: 4.5.1 (routine-update)
  * No tab in license text (routine-update)
  * watch file standard 4 (routine-update)
  * Build-Depends: python3-appdirs, python3-httpx, python3-pydantic,
    python3-rich
  * Versioned Build-Depends: python3-swiglpk (>= 4.65.1)

 -- Andreas Tille <tille@debian.org>  Tue, 09 Feb 2021 08:43:16 +0100

python-cobra (0.19.0-1) unstable; urgency=medium

  [ Andreas Tille ]
  * Team upload.
  * New upstream version
  * importlib_resources is not packaged for Debian thus ignore the test that
    needs this module
  * pytest.mark.skip did not worked that way. :-(
  * Really exclude tests requiring importlib_resources

  [ Nilesh Patra ]
  * Do not use python3-all (Closes: #972812)
    - sbml only builds its python extension for the default python
  * xfail test_show_versions which xpass during autopkgtest
  * Adapt data location with new version
  * Rename overrides

 -- Nilesh Patra <npatra974@gmail.com>  Thu, 05 Nov 2020 22:12:34 +0530

python-cobra (0.18.1-2) unstable; urgency=medium

  * Exclude s390x from list of architectures since one test of the test
    suite fails on this architecture and there are no resources to track
    this down.
    Closes: #961224

 -- Andreas Tille <tille@debian.org>  Sat, 08 Aug 2020 14:59:14 +0200

python-cobra (0.18.1-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * debhelper-compat 13 (routine-update)

 -- Andreas Tille <tille@debian.org>  Sat, 08 Aug 2020 12:04:31 +0200

python-cobra (0.18.0-3) unstable; urgency=medium

  * Team upload
  * Use strong Depends instead of Recommends for several dependent modules
    Closes: #958538

 -- Andreas Tille <tille@debian.org>  Tue, 12 May 2020 08:20:18 +0200

python-cobra (0.18.0-2) unstable; urgency=medium

  * Add missing Dependency from python3-sbml5
    Closes: #958538

 -- Andreas Tille <tille@debian.org>  Sun, 10 May 2020 21:04:49 +0200

python-cobra (0.18.0-1) unstable; urgency=medium

  * Team upload.
  * Drop outdated TODO
  * debhelper-compat 12
  * Standards-Version: 4.5.0 (routine-update)
  * python3-sbml is now python2-sbml5
  * d/control:
     - Build-Depends: python3-matplotlib
       Closes: #955656
     - Use nocheck
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * debian/copyright: use spaces rather than tabs to start continuation
    lines.
  * Use secure URI in Homepage field.
  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
    Repository-Browse.
  * debian/tests/control: s/ADTTMP/AUTOPKGTEST_TMP/

 -- Andreas Tille <tille@debian.org>  Mon, 20 Apr 2020 19:11:22 +0200

python-cobra (0.14.2-2) unstable; urgency=medium

  * Team upload.
  * Set correct exit return for autopkgtest
    Closes: #912586
  * Remove unused or redundant test dependencies

 -- Liubov Chuprikova <chuprikovalv@gmail.com>  Sat, 16 Feb 2019 20:08:53 +0100

python-cobra (0.14.2-1) unstable; urgency=medium

  * Team upload.
  * Do not install __pycache__
  * debhelper 12
  * Standards-Version: 4.3.0
  * rename debian/tests/control.autodep8 to debian/tests/control
  * Enable python3-sbml
  * Build-/Test-Depends: python3-simplejson

 -- Andreas Tille <tille@debian.org>  Mon, 04 Feb 2019 15:12:37 +0100

python-cobra (0.14.1-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Versioned Depends: python3-pipdeptree (>= 0.13.1)
    (see https://github.com/opencobra/cobrapy/issues/780)
    Closes: #916706
  * Add missing Recommends and Test-Depends

 -- Andreas Tille <tille@debian.org>  Tue, 18 Dec 2018 09:42:44 +0100

python-cobra (0.13.4-2) unstable; urgency=medium

  [ Matthias Klose ]
  * Team upload
  * Add python3-pytest-benchmark to the autopkg test dependencies.
    Closes: #912574

  [ Andreas Tille ]
  * Secure URI in copyright format
  * Remove trailing whitespace in debian/changelog

 -- Andreas Tille <tille@debian.org>  Thu, 01 Nov 2018 14:00:10 +0100

python-cobra (0.13.4-1) unstable; urgency=medium

  * Team upload.

  [ Afif Elghraoui ]
  * New upstream version
    Closes: #904709
  * Update dependencies
  * Refresh patch
  * Drop obsolete patch

  [ Andreas Tille ]
  * Standards-Version: 4.2.1
  * Point Vcs-fields to Salsa
  * debhelper 11
  * cme fix dpkg-control
  * Build-Depends: python*-requests, python*-pip
  * Drop failing test TestCobraFluxSampling.test_fixed_seed
  * Rename debian/tests/control to control.autodep8
  * Testsuite: autopkgtest-pkg-python
  * Drop Python2 package since it has no reverse dependencies
    (as well as autopkgtest of Python2 version)
  * Build-Depends: python3-depinfo, python3-pipdeptree
  * Drop failing test: test_show_versions (needs further investigation
    with upstream)
  * Silence lintian about wrong Python version of data file

 -- Andreas Tille <tille@debian.org>  Wed, 17 Oct 2018 21:31:48 +0200

python-cobra (0.5.9-1) unstable; urgency=medium

  * New upstream release
  * Refresh patch

 -- Afif Elghraoui <afif@debian.org>  Wed, 25 Jan 2017 01:22:48 -0800

python-cobra (0.5.6-1) unstable; urgency=medium

  * Imported Upstream version 0.5.6
  * Update packaging to accommodate change in test suite framework
    - include a workaround for #846045 (in pytest-benchmark) to be able
      to run tests without pytest-benchmark available.
  * d/tests/Makefile: update test script to accommodate return code change

 -- Afif Elghraoui <afif@debian.org>  Tue, 29 Nov 2016 03:12:24 -0800

python-cobra (0.5.4-1) unstable; urgency=medium

  * Imported Upstream version 0.5.4
  * Update upstream contact

 -- Afif Elghraoui <afif@debian.org>  Mon, 07 Nov 2016 20:51:23 -0800

python-cobra (0.5.2-1) unstable; urgency=medium

  * Drop patch applied upstream
  * Imported Upstream version 0.5.2
  * Update docs installation
  * Remove unused lintian overrides

 -- Afif Elghraoui <afif@debian.org>  Fri, 21 Oct 2016 22:57:41 -0700

python-cobra (0.4.2~b1-1) unstable; urgency=medium

  * Imported Upstream version 0.4.2~b1
  * Refresh patches
  * Use Make to drive autopkgtests and document some rationale
  * Clean up d/control and d/rules
  * Include jsonschema and pandas to run additional CI tests

 -- Afif Elghraoui <afif@debian.org>  Sun, 17 Jul 2016 16:43:42 -0700

python-cobra (0.4.1-2) unstable; urgency=medium

  * Team upload.
  * Make build reproducible.
    - Ensure stable ordering for required dependencies.
  * Bump Standards-Version.

 -- Sascha Steinbiss <sascha@steinbiss.name>  Wed, 01 Jun 2016 14:47:03 +0000

python-cobra (0.4.1-1) unstable; urgency=medium

  * Imported Upstream version 0.4.1
  * Refreshed patch

 -- Afif Elghraoui <afif@debian.org>  Thu, 24 Mar 2016 20:31:39 -0700

python-cobra (0.4.0+0-1) unstable; urgency=medium

  * Imported Upstream version 0.4.0
  * Add uversionmangle to d/watch
  * Use encrypted protocols for VCS URLs

 -- Afif Elghraoui <afif@ghraoui.name>  Tue, 08 Mar 2016 22:04:56 -0800

python-cobra (0.4.0b7-1) unstable; urgency=medium

  * Imported Upstream version 0.4.0b7
  * Update standards version
  * Run additional tests at build-time
  * Clean up and fix autopkgtest

 -- Afif Elghraoui <afif@ghraoui.name>  Sat, 20 Feb 2016 01:05:24 -0800

python-cobra (0.4.0b6-1) unstable; urgency=medium

  * Run autopkgtests from outside the source tree
  * Imported Upstream version 0.4.0b6

 -- Afif Elghraoui <afif@ghraoui.name>  Mon, 21 Dec 2015 21:29:51 -0800

python-cobra (0.4.0b4-1) unstable; urgency=medium

  * Imported Upstream version 0.4.0b4

 -- Afif Elghraoui <afif@ghraoui.name>  Sun, 13 Sep 2015 02:15:32 -0700

python-cobra (0.4.0b3-1) unstable; urgency=medium

  * Imported Upstream version 0.4.0b3
  * Removed patch that was applied upstream
  * Adjusted autopkgtest commands
  * Refreshed quilt patch

 -- Afif Elghraoui <afif@ghraoui.name>  Fri, 28 Aug 2015 22:27:50 -0700

python-cobra (0.4.0b2-1) unstable; urgency=medium

  * Adjust package relationships as requested by upstream
  * Imported Upstream version 0.4.0b2 (Closes: 794978)
  * Require matching version of the data package
  * Configured autopkgtests
  * Allowed tests to run without python-jsonschema
  * Added lintian overrides for python-cobra-data

 -- Afif Elghraoui <afif@ghraoui.name>  Tue, 04 Aug 2015 18:52:51 -0700

python-cobra (0.4.0b1-2) unstable; urgency=medium

  * Add more recommended packages in d/control
  * Add suggestion of jython for python-cobra
  * Really remove jython files from python3-package.
    Thanks to Aaron Ucko for the bug report (Closes: 792058)

 -- Afif Elghraoui <afif@ghraoui.name>  Fri, 10 Jul 2015 18:35:52 -0700

python-cobra (0.4.0b1-1) unstable; urgency=medium

  * Update watch file to pick up alpha and beta releases
  * Imported Upstream version 0.4.0b1
  * Remove obsolete patches
  * Remove copyright statements for files removed upstream
  * Update d/copyright to reflect new upstream dual-licensing and correct
    gpl3 mistake
  * Refine dh_install overrides to exclude jython code from python3 package
  * Add build-dependencies on python(3)-six
  * Disable building of documentation until Sphinx 1.3 is available

 -- Afif Elghraoui <afif@ghraoui.name>  Thu, 09 July 2015 18:12:36 -0700

python-cobra (0.3.2-1) unstable; urgency=medium

  * Initial release (Closes: #788224)
  * Add patches to improve Python3 compatibility
  * Specify copyright for the externally-contributed modules
  * Exclude cobra/test/data/update_pickles.py
  * Create package for data and documentation
  * Use packaged versions of javascript libraries where available

 -- Afif Elghraoui <afif@ghraoui.name>  Tue, 09 Jun 2015 06:20:48 -0700
