Find Pathway Names By Text — findPathwayNamesByText • rWikiPathways
Description: Retrieve list of pathway names containing the query text.

# Find Pathway Names By Text

Source: `R/findPathwayByText.R`
`findPathwayNamesByText.Rd`

Retrieve list of pathway names containing the query text.

    findPathwayNamesByText(query)

## Arguments

query | A `character` string to search for, e.g., "cancer"

## Value

A `list` of lists

## Details

Note: there will be multiple listings of the same pathway name if copies exist for multiple species.

## Examples

    {
    findPathwayNamesByText('cancer')
    }#>   [1] "Integrated Breast Cancer Pathway"
    #>   [2] "Integrated Breast Cancer Pathway"
    #>   [3] "Breast cancer pathway"
    #>   [4] "TCA Cycle Nutrient Utilization and Invasiveness of Ovarian Cancer"
    #>   [5] "TCA Cycle Nutrient Utilization and Invasiveness of Ovarian Cancer"
    #>   [6] "MFAP5-mediated ovarian cancer cell motility and invasiveness"
    #>   [7] "Integrated Cancer pathway"
    #>   [8] "Integrated Cancer Pathway"
    #>   [9] "Bladder Cancer"
    #>  [10] "Integrated Lung Cancer Pathway"
    #>  [11] "Genetic alterations of lung cancer"
    #>  [12] "Retinoblastoma Gene in Cancer"
    #>  [13] "Retinoblastoma Gene in Cancer"
    #>  [14] "Endometrial cancer"
    #>  [15] "Androgen Receptor Network in Prostate Cancer"
    #>  [16] "miRNA regulation of prostate cancer signaling pathways"
    #>  [17] "miRNA regulation of p53 pathway in prostate cancer"
    #>  [18] "Gastric Cancer Network 2"
    #>  [19] "FABP4 in ovarian cancer"
    #>  [20] "Senescence and Autophagy in Cancer"
    #>  [21] "Bladder Cancer"
    #>  [22] "Folate-Alcohol and Cancer Pathway"
    #>  [23] "Folate-Alcohol and Cancer Pathway Hypotheses"
    #>  [24] "Gastric cancer network 2"
    #>  [25] "Gastric Cancer Network 1"
    #>  [26] "Gastric Cancer Network 1"
    #>  [27] "Cancer immunotherapy by PD-1 blockade"
    #>  [28] "Metabolic reprogramming in colon cancer"
    #>  [29] "Small cell lung cancer"
    #>  [30] "Ultraconserved region 339 modulation of tumor suppressor microRNAs in cancer"
    #>  [31] "Deregulation of Rab and Rab Effector Genes in Bladder Cancer"
    #>  [32] "Deregulation of Rab and Rab Effector Genes in Bladder Cancer"
    #>  [33] "MicroRNA for Targeting Cancer Growth and Vascularization in Glioblastoma"
    #>  [34] "Epithelial to mesenchymal transition in colorectal cancer"
    #>  [35] "mir-193a and MVP in colon cancer metastasis"
    #>  [36] "Non-small cell lung cancer"
    #>  [37] "Cancer immunotherapy by CTLA4 blockade"
    #>  [38] "Chromosomal and microsatellite instability in colorectal cancer "
    #>  [39] " Lipids measured in liver metastasis from breast cancer"
    #>  [40] "Modified nucleosides derived from t-RNA as urinary cancer markers"
    #>  [41] "Neural Crest Cell Migration in Cancer"
    #>  [42] "LncRNA involvement in canonical Wnt signaling and colorectal cancer"
    #>  [43] "MFAP5 effect on permeability and motility of endothelial cells via cytoskeleton rearrangement"
    #>  [44] "Apoptosis-related network due to altered Notch3 in ovarian cancer"
    #>  [45] "Apoptosis-related network due to altered Notch3 in ovarian cancer"
    #>  [46] "4-hydroxytamoxifen, Dexamethasone, and Retinoic Acids Regulation of p27 Expression"
    #>  [47] "Fluoropyrimidine Activity"
    #>  [48] "Fluoropyrimidine Activity"
    #>  [49] "Model for regulation of MSMP expression in cancer cells and its proangiogenic role in ovarian tumors"
    #>  [50] "cancer"
    #>  [51] "ncRNAs involved in STAT3 signaling in hepatocellular carcinoma"
    #>  [52] "ErbB Signaling Pathway"
    #>  [53] "Melatonin metabolism and effects"
    #>  [54] "ErbB signaling pathway"
    #>  [55] "ErbB signaling pathway"
    #>  [56] "ErbB signaling pathway"
    #>  [57] "ErbB Signaling Pathway"
    #>  [58] "ErbB signaling pathway"
    #>  [59] "ErbB signaling pathway"
    #>  [60] "Association Between Physico-Chemical Features and Toxicity Associated Pathways"
    #>  [61] "LncRNA-mediated mechanisms of therapeutic resistance"
    #>  [62] "ErbB Signaling Pathway"
    #>  [63] "inflammation and cancer"
    #>  [64] "Netrin-UNC5B signaling Pathway"
    #>  [65] "ncRNAs involved in Wnt signaling in hepatocellular carcinoma"
    #>  [66] "Interactions between immune cells and microRNAs in tumor microenvironment"
    #>  [67] "H19 action Rb-E2F1 signaling and CDK-Beta-catenin activity"
    #>  [68] "TNF-alpha NF-kB Signaling Pathway"
    #>  [69] "TNF-alpha NF-kB Signaling Pathway"
    #>  [70] "TNF-alpha NF-kB Signaling Pathway"
    #>  [71] "TNF-alpha NF-kB Signaling Pathway"
    #>  [72] "Senescence and Autophagy in Cancer"
    #>  [73] "inflammation leading to cancer"
    #>  [74] "miR-509-3p alteration of YAP1/ECM axis"
    #>  [75] "Tamoxifen metabolism"
    #>  [76] "PDGFR-beta pathway"
    #>  [77] "RIOK1 and RIOK2 in EGFR- and PI3K-mediated tumorigenesis"
    #>  [78] "TP53 Network"
    #>  [79] "Photodynamic therapy-induced AP-1 survival signaling."
    #>  [80] "TP53 Network"
    #>  [81] "TGF-B Signaling in Thyroid Cells for Epithelial-Mesenchymal Transition"
    #>  [82] "Regulation of Apoptosis by Parathyroid Hormone-related Protein"
    #>  [83] "Photodynamic therapy-induced unfolded protein response"
    #>  [84] "Photodynamic therapy-induced HIF-1 survival signaling"
    #>  [85] "Photodynamic therapy-induced NF-kB survival signaling"
    #>  [86] "Photodynamic therapy-induced NFE2L2 (NRF2) survival signaling"
    #>  [87] "RAC1/PAK1/p38/MMP2 Pathway"
    #>  [88] "Hereditary leiomyomatosis and renal cell carcinoma pathway"
    #>  [89] "Amplification and Expansion of Oncogenic Pathways as Metastatic Traits"
    #>  [90] "Toll-like Receptor Signaling related to MyD88"
    #>  [91] "Inhibition of exosome biogenesis and secretion by Manumycin A in CRPC cells"
    #>  [92] "Extracellular vesicle-mediated signaling in recipient cells"
    #>  [93] "Mechanoregulation and pathology of YAP/TAZ via Hippo and non-Hippo mechanisms"
    #>  [94] "Extracellular vesicle-mediated signaling in recipient cells"
    #>  [95] "Aflatoxin B1 metabolism"
    #>  [96] "Tamoxifen metabolism"
    #>  [97] "Simplified Interaction Map Between LOXL4 and Oxidative Stress Pathway"
    #>  [98] "Tumor suppressor activity of SMARCB1"
    #>  [99] "Irinotecan Pathway"
    #> [100] "Overview of leukocyte-intrinsic Hippo pathway functions"
    #> [101] "Irinotecan Pathway"
    #> [102] "PI3K-Akt Signaling Pathway"
    #> [103] "PDGF Pathway"
    #> [104] "PDGF Pathway"
    #> [105] "aspirin and miRNAs"
    #> [106] "DNA IR-damage and cellular response via ATR"
    #> [107] "Pancreatic adenocarcinoma pathway"
    #> [108] "Signaling Pathways in Glioblastoma"
    #> [109] "Signaling Pathways in Glioblastoma"
    #> [110] "Overview of nanoparticle effects"
    #> [111] "Gastrin Signaling Pathway"
    #> [112] "Canonical wnt signaling"
    #> [113] "Corticotropin-releasing hormone signaling pathway"
    #> [114] "Corticotropin-releasing hormone"
    #> [115] "IL-18 signaling pathway"