Find Pathway Names By Xref — findPathwayNamesByXref • rWikiPathways
Description: Retrieve list of pathway names containing the query Xref by identifier and system code.

# Find Pathway Names By Xref

Source: `R/findPathwaysByXref.R`
`findPathwayNamesByXref.Rd`

Retrieve list of pathway names containing the query Xref by identifier and system code.

    findPathwayNamesByXref(identifier, systemCode)

## Arguments

identifier | (`character`) The official ID specified by a data source or system
systemCode | (`character`) The BridgeDb code associated with the data source or system, e.g., En (Ensembl), L (Entrez), Ch (HMDB), etc. See column two of https://github.com/bridgedb/BridgeDb/blob/master/org.bridgedb.bio/resources/org/bridgedb/bio/datasources.txt.

## Value

A `list` of lists

## Details

Note: there will be multiple listings of the same pathway if the Xref is present mutiple times.

## Examples

    {
    findPathwayNamesByXref('ENSG00000232810','En')
    }#>   [1] "Mammary gland development pathway - Embryonic development (Stage 1 of 4)"
    #>   [2] "miRNAs involvement in the immune response in sepsis"
    #>   [3] "miRNAs involvement in the immune response in sepsis"
    #>   [4] "Nuclear Receptors Meta-Pathway"
    #>   [5] "Interleukin-4 and Interleukin-13 signaling"
    #>   [6] "Interleukin-4 and Interleukin-13 signaling"
    #>   [7] "Protein alkylation leading to liver fibrosis"
    #>   [8] "Protein alkylation leading to liver fibrosis"
    #>   [9] "Interleukin-10 signaling"
    #>  [10] "Transcription factor regulation in adipogenesis"
    #>  [11] "Aryl Hydrocarbon Receptor Pathway"
    #>  [12] "Development and heterogeneity of the ILC family"
    #>  [13] "Development and heterogeneity of the ILC family"
    #>  [14] "EBV LMP1 signaling"
    #>  [15] "Fibrin Complement Receptor 3 Signaling Pathway"
    #>  [16] "Novel intracellular components of RIG-I-like receptor (RLR) pathway"
    #>  [17] "Oxidative Damage"
    #>  [18] "Lung fibrosis"
    #>  [19] "Spinal Cord Injury"
    #>  [20] "Spinal Cord Injury"
    #>  [21] "Spinal Cord Injury"
    #>  [22] "Spinal Cord Injury"
    #>  [23] "T-Cell antigen Receptor (TCR) pathway during Staphylococcus aureus infection"
    #>  [24] "Genes involved in male infertility"
    #>  [25] "Overview of nanoparticle effects"
    #>  [26] "NO/cGMP/PKG mediated Neuroprotection"
    #>  [27] "Non-genomic actions of 1,25 dihydroxyvitamin D3"
    #>  [28] "Hepatitis B infection"
    #>  [29] "Hepatitis B infection"
    #>  [30] "Alzheimers Disease"
    #>  [31] "Polycystic Kidney Disease Pathway"
    #>  [32] "Type II diabetes mellitus"
    #>  [33] "Viral Acute Myocarditis"
    #>  [34] "Resistin as a regulator of inflammation"
    #>  [35] "Cytokines and Inflammatory Response"
    #>  [36] "Cytokines and Inflammatory Response"
    #>  [37] "Cytokines and Inflammatory Response"
    #>  [38] "Cytokines and Inflammatory Response"
    #>  [39] "Cytokines and Inflammatory Response"
    #>  [40] "Cytokines and Inflammatory Response"
    #>  [41] "Cytokines and Inflammatory Response"
    #>  [42] "TNF signaling"
    #>  [43] "TNF signaling"
    #>  [44] "TNF signaling"
    #>  [45] "TNF signaling"
    #>  [46] "TNF signaling"
    #>  [47] "TNF signaling"
    #>  [48] "TNF signaling"
    #>  [49] "TNF signaling"
    #>  [50] "TNF signaling"
    #>  [51] "TNF signaling"
    #>  [52] "TNF signaling"
    #>  [53] "TNF signaling"
    #>  [54] "TNF signaling"
    #>  [55] "TNF signaling"
    #>  [56] "TNF signaling"
    #>  [57] "TNF signaling"
    #>  [58] "TNF signaling"
    #>  [59] "TNF signaling"
    #>  [60] "TNF signaling"
    #>  [61] "TNF signaling"
    #>  [62] "TNF signaling"
    #>  [63] "TNF signaling"
    #>  [64] "TNF signaling"
    #>  [65] "TNF signaling"
    #>  [66] "TNF signaling"
    #>  [67] "TNF signaling"
    #>  [68] "TNF signaling"
    #>  [69] "TNF signaling"
    #>  [70] "TNF signaling"
    #>  [71] "TNF signaling"
    #>  [72] "TNF signaling"
    #>  [73] "TNF signaling"
    #>  [74] "TNF signaling"
    #>  [75] "TNF signaling"
    #>  [76] "TNF signaling"
    #>  [77] "TNF signaling"
    #>  [78] "TNF signaling"
    #>  [79] "TNF signaling"
    #>  [80] "TNF signaling"
    #>  [81] "Transcriptional regulation of white adipocyte differentiation"
    #>  [82] "Nonalcoholic fatty liver disease"
    #>  [83] "Nonalcoholic fatty liver disease"
    #>  [84] "Nonalcoholic fatty liver disease"
    #>  [85] "Interleukin-4 and Interleukin-13 signaling"
    #>  [86] "Interleukin-4 and Interleukin-13 signaling"
    #>  [87] "Protein alkylation leading to liver fibrosis"
    #>  [88] "TNFR2 non-canonical NF-kB pathway"
    #>  [89] "TNFR2 non-canonical NF-kB pathway"
    #>  [90] "TNFR2 non-canonical NF-kB pathway"
    #>  [91] "TNFR2 non-canonical NF-kB pathway"
    #>  [92] "TNFR2 non-canonical NF-kB pathway"
    #>  [93] "TNFR2 non-canonical NF-kB pathway"
    #>  [94] "TNFR2 non-canonical NF-kB pathway"
    #>  [95] "TNFR2 non-canonical NF-kB pathway"
    #>  [96] "Signal transduction through IL1R"
    #>  [97] "Photodynamic therapy-induced AP-1 survival signaling."
    #>  [98] "Photodynamic therapy-induced AP-1 survival signaling."
    #>  [99] "Photodynamic therapy-induced AP-1 survival signaling."
    #> [100] "Cells and Molecules involved in local acute inflammatory response "
    #> [101] "Interleukin-10 signaling"
    #> [102] "LTF danger signal response pathway"
    #> [103] "TNF alpha Signaling Pathway"
    #> [104] "TNF alpha Signaling Pathway"
    #> [105] "TNF alpha Signaling Pathway"
    #> [106] "TNF alpha Signaling Pathway"
    #> [107] "TNF alpha Signaling Pathway"
    #> [108] "TNF alpha Signaling Pathway"
    #> [109] "TLR4 Signaling and Tolerance"
    #> [110] "TNF related weak inducer of apoptosis (TWEAK) Signaling Pathway"
    #> [111] "TNF related weak inducer of apoptosis (TWEAK) Signaling Pathway"
    #> [112] "TNF related weak inducer of apoptosis (TWEAK) Signaling Pathway"
    #> [113] "Toll-like Receptor Signaling Pathway"
    #> [114] "Adipogenesis"
    #> [115] "Apoptosis"
    #> [116] "Fas Ligand (FasL) pathway and Stress induction of Heat Shock Proteins (HSP) regulation"
    #> [117] "TGF-beta Receptor Signaling"
    #> [118] "TGF-beta Receptor Signaling"
    #> [119] "Regulation of toll-like receptor signaling pathway"
    #> [120] "Photodynamic therapy-induced NF-kB survival signaling"
    #> [121] "Photodynamic therapy-induced NF-kB survival signaling"
    #> [122] "Allograft Rejection"
    #> [123] "Matrix Metalloproteinases"
    #> [124] "Nanoparticle triggered regulated necrosis"
    #> [125] "Cardiac Hypertrophic Response"
    #> [126] "EV release from cardiac cells and their functional effects"
    #> [127] "Sudden Infant Death Syndrome (SIDS) Susceptibility Pathways"
    #> [128] "Selenium Micronutrient Network"
    #> [129] "Selenium Micronutrient Network"
    #> [130] "Vitamin B12 Metabolism"
    #> [131] "Vitamin B12 Metabolism"
    #> [132] "Folate Metabolism"
    #> [133] "Folate Metabolism"
    #> [134] "MAPK Signaling Pathway"
    #> [135] "Monoamine Transport"
    #> [136] "Aryl Hydrocarbon Receptor Netpath"
    #> [137] "Role of Altered Glycolysation of MUC1 in Tumour Microenvironment"
    #> [138] "Oligodendrocyte Specification and differentiation(including remyelination), leading to Myelin Components for CNS"
    #> [139] "Oligodendrocyte Specification and differentiation(including remyelination), leading to Myelin Components for CNS"
    #> [140] "Apoptosis-related network due to altered Notch3 in ovarian cancer"
    #> [141] "Vitamin D in inflammatory diseases"
    #> [142] "IL-18 signaling pathway"
    #> [143] "IL-18 signaling pathway"
    #> [144] "MicroRNAs in cardiomyocyte hypertrophy"
    #> [145] "Netrin-UNC5B signaling Pathway"
    #> [146] "TGF-beta Receptor Signaling"
    #> [147] "TGF-beta Receptor Signaling"
    #> [148] "Amyotrophic lateral sclerosis (ALS)"
    #> [149] "Amyotrophic lateral sclerosis (ALS)"