Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: relion
Upstream-Contact: scheres@mrc-lmb.cam.ac.uk
Source: https://github.com/3dem/relion.git

Files: *
Copyright: 2014-2020, Sjors Scheres at the MRC Laboratory of Molecular Biology
License: GPL-2+

Files: debian/*
Copyright: 2014-2020, Q-Leap Networks GmbH <info@q-leap.de>
License: GPL-2+

Files: src/CPlot2D.cpp
  src/CPlot2D.h
Copyright: 2014, AMZs.
License: GPL-2+

Files: src/Healpix_2.15a/arr.h
 src/Healpix_2.15a/cxxutils.cc
 src/Healpix_2.15a/cxxutils.h
 src/Healpix_2.15a/datatypes.h
 src/Healpix_2.15a/geom_utils.h
 src/Healpix_2.15a/healpix_base.cc
 src/Healpix_2.15a/healpix_base.h
 src/Healpix_2.15a/message_error.h
 src/Healpix_2.15a/openmp_support.h
 src/Healpix_2.15a/pointing.h
 src/Healpix_2.15a/vec3.h
Copyright: 2002-2007, Max-Planck-Society
  2003, 2006, Max-Planck-Society
  2003, Max-Planck-Society
  2003-2004, Max-Planck-Society
  2003-2006, Max-Planck-Society
  2004, Max-Planck-Society
  2005-2007, Max-Planck-Society
License: GPL-2+

Files: src/acc/cuda/cub/agent/*
 src/acc/cuda/cub/block/*
 src/acc/cuda/cub/cub.cuh
 src/acc/cuda/cub/device/*
 src/acc/cuda/cub/grid/*
 src/acc/cuda/cub/host/mutex.cuh
 src/acc/cuda/cub/iterator/*
 src/acc/cuda/cub/thread/*
 src/acc/cuda/cub/util*
 src/acc/cuda/cub/warp/*
 src/gpu-utils/cub/agent/*
 src/gpu-utils/cub/block/*
 src/gpu-utils/cub/cub.cuh
 src/gpu-utils/cub/device/*
 src/gpu-utils/cub/grid/*
 src/gpu-utils/cub/host/mutex.cuh
 src/gpu-utils/cub/iterator/*
 src/gpu-utils/cub/thread/*
 src/gpu-utils/cub/util*
 src/gpu-utils/cub/warp/*
Copyright: 2011, Duane Merrill.
  2011-2016, NVIDIA CORPORATION.
  2011-2017, NVIDIA CORPORATION.
License: BSD-3-clause

Files: src/jaz/d3x3/*
Copyright: 2006, Joachim Kopp
License: LGPL-2.1+

Files: src/jaz/lbfgs/copyright.txt
 src/jaz/lbfgs/lbfgs.c
 src/jaz/lbfgs/lbfgs.h
Copyright: 1990, Jorge Nocedal
  2007-2010, Naoaki Okazaki
License: Expat

Files: src/jaz/lbfgs/arithmetic_ansi.h
 src/jaz/lbfgs/arithmetic_sse_double.h
 src/jaz/lbfgs/arithmetic_sse_float.h
Copyright: 2007-2010, Naoaki Okazaki
License: Expat

Files: cmake/GetGitRevisionDescription.cmake
 cmake/GetGitRevisionDescription.cmake.in
Copyright: Iowa State University 2009-2010.
License: BSL-1.0

Files: cmake/FindTBB.cmake
Copyright: 2015, Justus Calvin
License: Expat

Files: src/funcs.cpp
Copyright: 1984, 1987, 1995, 2000, Stephen L. Moshier
License: GPL-2+

License: BSD-3-clause
 Redistribution and use in source and binary forms, with or without
 modification, are permitted provided that the following conditions are
 met:
 .
 1. Redistributions of source code must retain the above copyright
 notice, this list of conditions and the following disclaimer.
 2. Redistributions in binary form must reproduce the above
 copyright notice, this list of conditions and the following
 disclaimer in the documentation and/or other materials provided
 with the distribution.
 3. Neither the name of the copyright holder nor the names of its
 contributors may be used to endorse or promote products derived
 from this software without specific prior written permission.
 .
 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
 "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
 LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
 A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
 HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
 SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
 LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
 DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
 THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
 (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
 OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

License: BSL-1.0
 Boost Software License - Version 1.0 - August 17th, 2003
 .
 Permission is hereby granted, free of charge, to any person or organization
 obtaining a copy of the software and accompanying documentation covered by
 this license (the "Software") to use, reproduce, display, distribute,
 execute, and transmit the Software, and to prepare derivative works of the
 Software, and to permit third-parties to whom the Software is furnished to
 do so, all subject to the following:
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 The copyright notices in the Software and this entire statement, including
 the above license grant, this restriction and the following disclaimer,
 must be included in all copies of the Software, in whole or in part, and
 all derivative works of the Software, unless such copies or derivative
 works are solely in the form of machine-executable object code generated by
 a source language processor.
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 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 FITNESS FOR A PARTICULAR PURPOSE, TITLE AND NON-INFRINGEMENT. IN NO EVENT
 SHALL THE COPYRIGHT HOLDERS OR ANYONE DISTRIBUTING THE SOFTWARE BE LIABLE
 FOR ANY DAMAGES OR OTHER LIABILITY, WHETHER IN CONTRACT, TORT OR OTHERWISE,
 ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
 DEALINGS IN THE SOFTWARE.

License: Expat
 Copyright (c) 1998, 1999, 2000 Thai Open Source Software Center Ltd
 .
 Permission is hereby granted, free of charge, to any person obtaining
 a copy of this software and associated documentation files (the
 "Software"), to deal in the Software without restriction, including
 without limitation the rights to use, copy, modify, merge, publish,
 distribute, sublicense, and/or sell copies of the Software, and to
 permit persons to whom the Software is furnished to do so, subject to
 the following conditions:
 .
 The above copyright notice and this permission notice shall be included
 in all copies or substantial portions of the Software.
 .
 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
 EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
 MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
 IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
 CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
 TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
 SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

License: GPL-2+
 This program is free software: you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
 the Free Software Foundation, either version 2 of the License, or
 (at your option) any later version.
 .
 This program is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 GNU General Public License for more details.
 .
 You should have received a copy of the GNU General Public License
 along with this program.  If not, see <http://www.gnu.org/licenses/>.
 .
 On Debian systems, the full text of the GNU General Public
 License version 2 can be found in the file
 `/usr/share/common-licenses/GPL-2'.

License: LGPL-2.1+
  The full text of this license can be found in the file
  `/usr/share/common-licenses/LGPL-2.1` on your Debian system.
