T-COFFEE, Version_11.00 (Version_11.00)
Cedric Notredame
CPU TIME:0 sec.
SCORE=500
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BAD AVG GOOD
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hmgb_chite : 31
hmgt_mouse : 31
hmgl_wheat : 32
hmgl_trybr : 33
1cms : 58
4pep : 58
4ape : 57
3app : 56
2apr : 57
1cms_1 : 36
cons : 50
hmgb_chite ad---kpkrplsay------m---------------lwlnsaresi------------------krenpdf-kvtevak-kggelwr------------------------------glk--dksewe----------------------
hmgt_mouse k-----pkrprsay------n---------------iyvsesfqea----------------------kdd-saqgklk-lvneawk------------------------------nlspeekqayi----------------------
hmgl_wheat dp--nkpkrapsaf------f---------------vfmgefreef------------------kqknpknksvaavgk-aagerwk------------------------------slsesekapyv----------------------
hmgl_trybr kkdsnapkramtsf------m---------------ffssdfrskh----------------------sdl-sivemsk-aagaawk------------------------------elgpeerkvye----------------------
1cms GE---VASVPLTNY------LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSS---TFQ-NLGKPLSIHYGTGS-MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFD--------GILGMAYP
4pep -----IGDEPLENY------LDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSS---TFE-ATSQELSITYGTGS-MTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFD--------GILGLAYP
4ape STG-SATTTPIDS-------LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIYTPSKST---TAKLLSGATWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTID--------GLLGLAFS
3app AASGVATNTPTA--------NDEEYITPVTIGG--TTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSA-----TGKELSGYTWSISYGDGSSASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNND--------GLLGLAFS
2apr AG---VGTVPMTDYG-----NDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTN-CGSGQTKYDPNQSS---TYQ-ADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFAS-GPND--------GLLGLGFD
1cms_1 YTG-SLHWVPVTVQQYWQFTVDSVTISGVVVACEG-GCQAILDTGTSKLVGPSS------------------------------------------------------DILNIQQAIGATQNQYGEFDIDCDNLSYMPTVVFEINGKMYP
cons .
hmgb_chite ------------------------aka--at------akqnyiralqeyer--ng-----------g
hmgt_mouse ------------------------qla--kd------drirydnemkswee--qm--a--------e
hmgl_wheat ------------------------aka--nk------lkgeynkaiaaynk--ge--s--------a
hmgl_trybr ------------------------ema--ek------dkerykrem---------------------
1cms SLASEY---SIPV--------F--DNMMNRH----LVAQDLFSVYM-DRNG--QESMLTLGAIDPSY
4pep SISASG---ATPV--------F--DNLWDQG----LVSQDLFSVYL-SSNDD-SGSVVLLGGIDSSY
4ape TLNTVSPTQQKTF--------F--DNA--KA----SLDSPVFTADL-GYH---APGTYNFGFIDTTA
3app SINTVQPQSQTTF--------F--DTV--KS----SLAQPLFAVAL-KHQ---QPGVYDFGFIDSSK
2apr TITTVRG--VKTP--------M--DNLISQG----LISRPIFGVYL-GKAKNGGGGEYIFGGYDSTK
1cms_1 LTPSAY---TS-QDQGFCTSGFQSENHSQKWILGDVFIREYYSVFD-RANN--LVGLA--KAI----
cons :