T-COFFEE, Version_11.00 (Version_11.00)
Cedric Notredame
CPU TIME:0 sec.
SCORE=294
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BAD AVG GOOD
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hmgl_trybr : 23
hmgt_mouse : 24
hmgb_chite : 25
hmgl_wheat : 26
1cms : 32
4pep : 31
4ape : 32
3app : 31
2apr : 33
1cms_1 : 17
cons : 29
hmgl_trybr kkds------na-----------------p-------------kramtsfm-----ffssd-------------------------------f----rskhs------d---------lsivemsk-aagaaw---------------ke
hmgt_mouse -----------k-----------------p-------------krprsayn-----iyvse-------------------------------s----fqeakd-dsaqg---------k-----lk-lvneaw---------------kn
hmgb_chite ---a------dk-----------------p-------------krplsaym-----lwlns-------------------------------a----resikr-enpdf---------k-vtevak-kggelw---------------rg
hmgl_wheat --dp------nk-----------------p-------------krapsaff-----vfmge-------------------------------f----reefkq-knpkn---------ksvaavgk-aagerw---------------ks
1cms -----GEVASVP-LTNYLDSQY-----FGKIYLG------TPPQEFTVLFDTGSSDFWVPSIY-----------------------------CKSNACKNHQR-FDPRK---------SS---TF-QNLGKPLSIHYGTGS-MQGILGYD
4pep -------IGDEP-LENYLDTEY-----FGTIGIG------TPAQDFTVIFDTGSSNLWVPSVY-----------------------------CSSLACSDHNQ-FNPDD---------SS---TF-EATSQELSITYGTGS-MTGILGYD
4ape ----STGSATTT-PIDSLDDAY-----ITPVQIG------TPAQTLNLDFDTGSSDLWVFSSE-----------------------------TTASEVDGQTI-YTPSK---------ST---TAKLLSGATWSISYGDGSSSSGDVYTD
3app ---AASGVATNT-PTAN-DEEY-----ITPVTIG--------GTTLNLNFDTGSADLWVFSTE-----------------------------LPASQQSGHSV-YNPS-----------A---TGKELSGYTWSISYGDGSSASGNVFTD
2apr ---AGVGTVPMT-DYGN-DIEY-----YGQVTIG------TPGKKFNLDFDTGSSDLWIASTL-----------------------------CTNCG-SGQTK-YDPNQ---------SS---TY-QADGRTWSISYGDGSSASGILAKD
1cms_1 ----YTGSLHWVPVTV----QQYWQFTVDSVTISGVVVACEGGCQA--ILDTGTSKLVGPSSDILNIQQAIGATQNQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQDQGFCTS---GFQ-SENHSQKWIL-------GDVF--
cons . . . .
hmgl_trybr ---------------lgpeerkvyeemaekd---ke----------r--------ykrem------------------------------------
hmgt_mouse ---------------lspeekqayiqlakdd---ri----------r--------ydnem-ks----------weeq--mae--------------
hmgb_chite ---------------lkd--kseweakaata---kq----------n--------yiral-qe----------yern--gg---------------
hmgl_wheat ---------------lsesekapyvakankl---kg----------e--------ynkai-aa----------ynkg--esa--------------
1cms TVTVSNIVDIQQTVGLSTQEPGDVFTYAEFD---GILGMAYPSLASEY---SIPVFDNMMNRHLVAQDLFSVYMDRN---GQE-SMLTLGAIDPSY
4pep TVQVGGISDTNQIFGLSETEPGSFLYYAPFD---GILGLAYPSISASG---ATPVFDNLWDQGLVSQDLFSVYLSSN---DDSGSVVLLGGIDSSY
4ape TVSVGGLTVTGQAVESAKKVSSSFTEDSTID---GLLGLAFSTLNTVSPTQQKTFFDN-AKAS-LDSPVFTADLGYH---AP--GTYNFGFIDTTA
3app SVTVGGVTAHGQAVQAAQQISAQFQQDTNND---GLLGLAFSSINTVQPQSQTTFFDT-VKSS-LAQPLFAVALKHQ---QP--GVYDFGFIDSSK
2apr NVNLGGLLIKGQTIELAKREAASFASGPN-D---GLLGLGFDTITTVRG--VKTPMDNLISQGLISRPIFGVYLGKAKNGGG--GEYIFGGYDSTK
1cms_1 -------------I------REY---YSVFDRANNLVGLA-------------------------------------------------KAI----
cons .