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  ~ SOFTWARE COPYRIGHT NOTICE
  ~ This software and its documentation are the copyright of the Broad Institute, Inc. All rights are reserved.
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  ~ This software is licensed under the terms of the GNU Lesser General Public License (LGPL),
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<database version="alpha"
          host="genome-mysql.cse.ucsc.edu"
          path="hg18"
          port=""
          subprotocol="mysql"
          username="genome"
          name="UCSC"
          description="UCSC Genomic database">

    <!--We require explicit column names for the chromosome and position
     column names, since we query over those-->
    <table name="knownGene" format="ucscgene" description="Gene prediction track"
           chromoColName="chrom" posStartColName="txStart" posEndColName="txEnd"/>

    <table name="affyExonTissues" format="bed" description="Core PS"
           chromoColName="chrom" posStartColName="chromStart" posEndColName="chromEnd" startColIndex="2"
           endColIndex="13" binColName="bin"/>

    <table name="all_mrna" format="psl" description="Human mRNAs from GenBank"
           chromoColName="tName" posStartColName="tStart" posEndColName="tEnd" startColIndex="2" binColName="bin"/>

    <table name="snp126" format="bed" description="Polymorphism data from dbSNP"
           chromoColName="chrom" posStartColName="chromStart" posEndColName="chromEnd" startColIndex="2"
           endColIndex="7" binColName="bin"/>
</database>
	
