<?xml version="1.0" encoding="UTF-8"?>
<java version="1.8.0_76-release" class="java.beans.XMLDecoder">
 <object class="com.jformdesigner.model.FormModel">
  <void property="contentType">
   <string>form/swing</string>
  </void>
  <void property="root">
   <object class="com.jformdesigner.model.FormRoot">
    <void method="add">
     <object class="com.jformdesigner.model.FormWindow">
      <string>javax.swing.JDialog</string>
      <object class="com.jformdesigner.model.FormLayoutManager">
       <class>java.awt.BorderLayout</class>
      </object>
      <void method="setProperty">
       <string>defaultCloseOperation</string>
       <int>2</int>
      </void>
      <void method="setProperty">
       <string>$sizePolicy</string>
       <int>0</int>
      </void>
      <void method="add">
       <object class="com.jformdesigner.model.FormContainer">
        <string>javax.swing.JScrollPane</string>
        <object class="com.jformdesigner.model.FormLayoutManager">
         <class>javax.swing.JScrollPane</class>
        </object>
        <void property="name">
         <string>panel7</string>
        </void>
        <void method="add">
         <object class="com.jformdesigner.model.FormContainer">
          <string>javax.swing.JPanel</string>
          <object class="com.jformdesigner.model.FormLayoutManager">
           <class>java.awt.BorderLayout</class>
          </object>
          <void property="name">
           <string>panel6</string>
          </void>
          <void method="add">
           <object class="com.jformdesigner.model.FormContainer">
            <string>javax.swing.JTabbedPane</string>
            <object class="com.jformdesigner.model.FormLayoutManager">
             <class>javax.swing.JTabbedPane</class>
            </object>
            <void method="setProperty">
             <string>preferredSize</string>
             <object class="java.awt.Dimension">
              <int>805</int>
              <int>800</int>
             </object>
            </void>
            <void method="setProperty">
             <string>maximumSize</string>
             <object class="java.awt.Dimension">
              <int>805</int>
              <int>800</int>
             </object>
            </void>
            <void property="name">
             <string>tabbedPane</string>
            </void>
            <void method="add">
             <object class="com.jformdesigner.model.FormContainer">
              <string>javax.swing.JScrollPane</string>
              <object class="com.jformdesigner.model.FormLayoutManager">
               <class>javax.swing.JScrollPane</class>
              </object>
              <void property="name">
               <string>panel22</string>
              </void>
              <void method="add">
               <object class="com.jformdesigner.model.FormContainer">
                <string>javax.swing.JPanel</string>
                <object class="com.jformdesigner.model.FormLayoutManager">
                 <class>java.awt.BorderLayout</class>
                </object>
                <void property="name">
                 <string>generalPanel</string>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>com.jformdesigner.designer.wrapper.VSpacer</string>
                  <void method="setProperty">
                   <string>preferredSize</string>
                   <object class="java.awt.Dimension">
                    <int>10</int>
                    <int>20</int>
                   </object>
                  </void>
                  <void property="name">
                   <string>vSpacer7</string>
                  </void>
                 </object>
                 <object class="com.jformdesigner.model.FormLayoutConstraints">
                  <class>java.lang.String</class>
                  <void method="setProperty">
                   <string>value</string>
                   <string>North</string>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormContainer">
                  <string>javax.swing.JPanel</string>
                  <object class="com.jformdesigner.model.FormLayoutManager">
                   <class>java.awt.GridBagLayout</class>
                   <void method="setProperty">
                    <string>$columnSpecs</string>
                    <string>0, 0, 0, 0, 0, 0, 0, 0, 0</string>
                   </void>
                   <void method="setProperty">
                    <string>$rowSpecs</string>
                    <string>0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0</string>
                   </void>
                   <void method="setProperty">
                    <string>$hGap</string>
                    <int>5</int>
                   </void>
                   <void method="setProperty">
                    <string>$vGap</string>
                    <int>15</int>
                   </void>
                   <void method="setProperty">
                    <string>$alignTop</string>
                    <boolean>true</boolean>
                   </void>
                   <void method="setProperty">
                    <string>$alignLeft</string>
                    <boolean>true</boolean>
                   </void>
                  </object>
                  <void method="setProperty">
                   <string>border</string>
                   <object class="com.jformdesigner.model.FormObject" field="NULL_VALUE"/>
                  </void>
                  <void property="name">
                   <string>jPanel10</string>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JCheckBox</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Use relative paths in sessions</string>
                    </void>
                    <void property="name">
                     <string>sessionPathsCB</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>sessionPathsCBActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>font</string>
                     <object class="java.awt.Font">
                      <string>Lucida Grande</string>
                      <int>2</int>
                      <int>12</int>
                     </object>
                    </void>
                    <void method="setProperty">
                     <string>text</string>
                     <string>(NAME, DATA_TYPE, and DATA_FILE).</string>
                    </void>
                    <void property="name">
                     <string>missingDataExplanation</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>3</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>4</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>5</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JCheckBox</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Show default track attributes</string>
                    </void>
                    <void method="setProperty">
                     <string>toolTipText</string>
                     <string>Display default track attributes (NAME, DATA_TYPE, and DATA_FILE) in the attribute panel.</string>
                    </void>
                    <void property="name">
                     <string>showDefaultTrackAttributesCB</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>showDefaultTrackAttributesCBActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>4</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>2</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JCheckBox</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Display all tracks in a single panel</string>
                    </void>
                    <void property="name">
                     <string>combinePanelsCB</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>combinePanelsCBActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>2</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>3</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JCheckBox</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Show attribute panel</string>
                    </void>
                    <void property="name">
                     <string>showAttributesDisplayCheckBox</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>showAttributesDisplayCheckBoxActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>3</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>2</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JCheckBox</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Zoom to features</string>
                    </void>
                    <void method="setProperty">
                     <string>toolTipText</string>
                     <string>This option controls the behavior of feature searches.  If true, the zoom level is changed as required to size the view to the feature size.  If false, the zoom level is unchanged.</string>
                    </void>
                    <void property="name">
                     <string>searchZoomCB</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>searchZoomCBActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>6</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>2</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Feature flanking region (bp or %): </string>
                    </void>
                    <void method="setProperty">
                     <string>toolTipText</string>
                     <string>Added before and after feature locus when zooming to a feature.  Also used when defining panel extents in gene/loci list views.  A negative number is interpreted as a percentage.</string>
                    </void>
                    <void property="name">
                     <string>label4</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>9</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>4</int>
                    </void>
                    <void method="setProperty">
                     <string>insets</string>
                     <object class="java.awt.Insets">
                      <int>0</int>
                      <int>10</int>
                      <int>0</int>
                      <int>0</int>
                     </object>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JTextField</string>
                    <void method="setProperty">
                     <string>toolTipText</string>
                     <string>Added before and after feature locus when zooming to a feature.  Also used when defining panel extents in gene/loci list views.  A negative number is interpreted as a percentage.</string>
                    </void>
                    <void property="name">
                     <string>geneListFlankingField</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.FocusListener</string>
                      <string>focusLost</string>
                      <string>geneListFlankingFieldFocusLost</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>geneListFlankingFieldActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>4</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>9</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>3</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>font</string>
                     <object class="java.awt.Font" id="Font0">
                      <string>Lucida Grande</string>
                      <int>2</int>
                      <int>12</int>
                     </object>
                    </void>
                    <void method="setProperty">
                     <string>text</string>
                     <string>&lt;html&gt;&lt;i&gt;&amp;lt; 0 is interpreted as a percentage.&lt;/b&gt;</string>
                    </void>
                    <void method="setProperty">
                     <string>verticalAlignment</string>
                     <int>1</int>
                    </void>
                    <void property="name">
                     <string>zoomToFeatureExplanation2</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>7</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>9</int>
                    </void>
                    <void method="setProperty">
                     <string>vAlign</string>
                     <int>0</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Sequence resolution threshold (bp/pixel):</string>
                    </void>
                    <void property="name">
                     <string>label6</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>11</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>4</int>
                    </void>
                    <void method="setProperty">
                     <string>insets</string>
                     <object class="java.awt.Insets">
                      <int>0</int>
                      <int>10</int>
                      <int>0</int>
                      <int>0</int>
                     </object>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JTextField</string>
                    <void property="name">
                     <string>seqResolutionThreshold</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.FocusListener</string>
                      <string>focusLost</string>
                      <string>seqResolutionThresholdFocusLost</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>seqResolutionThresholdActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>4</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>11</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>3</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Default font:</string>
                    </void>
                    <void method="setProperty">
                     <string>labelFor</string>
                     <object class="com.jformdesigner.model.FormReference">
                      <string>defaultFontField</string>
                     </object>
                    </void>
                    <void property="name">
                     <string>label10</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>12</int>
                    </void>
                    <void method="setProperty">
                     <string>insets</string>
                     <object class="java.awt.Insets">
                      <int>0</int>
                      <int>10</int>
                      <int>0</int>
                      <int>0</int>
                     </object>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JButton</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Change...</string>
                    </void>
                    <void property="name">
                     <string>fontChangeButton</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>fontChangeButtonActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>6</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>12</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JCheckBox</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Show region boundaries</string>
                    </void>
                    <void property="name">
                     <string>showRegionBoundariesCB</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>showRegionBoundariesCBActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>5</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>4</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Background color (click to change):</string>
                    </void>
                    <void property="name">
                     <string>label7</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>14</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>3</int>
                    </void>
                    <void method="setProperty">
                     <string>insets</string>
                     <object class="java.awt.Insets">
                      <int>0</int>
                      <int>10</int>
                      <int>0</int>
                      <int>0</int>
                     </object>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormContainer">
                    <string>javax.swing.JPanel</string>
                    <object class="com.jformdesigner.model.FormLayoutManager">
                     <class>com.jformdesigner.runtime.NullLayout</class>
                     <void method="setProperty">
                      <string>autoSize</string>
                      <boolean>false</boolean>
                     </void>
                    </object>
                    <void method="setProperty">
                     <string>preferredSize</string>
                     <object class="java.awt.Dimension">
                      <int>20</int>
                      <int>20</int>
                     </object>
                    </void>
                    <void method="setProperty">
                     <string>border</string>
                     <object class="javax.swing.border.BevelBorder">
                      <int>0</int>
                      <null/>
                      <null/>
                      <null/>
                      <null/>
                     </object>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.MouseListener</string>
                      <string>mouseClicked</string>
                      <string>backgroundColorPanelMouseClicked</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                    <void property="name">
                     <string>backgroundColorPanel</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>3</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>14</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>2</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JCheckBox</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Enable Google access</string>
                    </void>
                    <void property="name">
                     <string>enableGoogleCB</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>enableGoogleCBActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>7</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Enable loading from Google apis.</string>
                    </void>
                    <void method="setProperty">
                     <string>font</string>
                     <object class="java.awt.Font">
                      <string>Lucida Grande</string>
                      <int>2</int>
                      <int>13</int>
                     </object>
                    </void>
                    <void property="name">
                     <string>label33</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>3</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>7</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>5</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JCheckBox</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Save Google credentials</string>
                    </void>
                    <void property="name">
                     <string>saveGoogleCredentialsCB</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>saveGoogleCredentialsCBActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>8</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Save authorization credentials across sessions</string>
                    </void>
                    <void method="setProperty">
                     <string>font</string>
                     <object class="java.awt.Font">
                      <string>Lucida Grande</string>
                      <int>2</int>
                      <int>13</int>
                     </object>
                    </void>
                    <void property="name">
                     <string>label34</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>3</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>8</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>5</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Default visibility window (kilobases):</string>
                    </void>
                    <void method="setProperty">
                     <string>toolTipText</string>
                     <string>A value &gt; 0 will set a default threshold windows size in kilobases above which features from indexed files are not loaded.  The threshold (&quot;visibility window&quot;) can be overridden explicitly for individual tracks via the track menu.</string>
                    </void>
                    <void property="name">
                     <string>textField1</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>10</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>3</int>
                    </void>
                    <void method="setProperty">
                     <string>insets</string>
                     <object class="java.awt.Insets">
                      <int>0</int>
                      <int>10</int>
                      <int>0</int>
                      <int>0</int>
                     </object>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JTextField</string>
                    <void method="setProperty">
                     <string>toolTipText</string>
                     <string>A value &gt; 0 will set a default threshold windows size in kilobases above which features from indexed files are not loaded.  The threshold (&quot;visibility window&quot;) can be overridden explicitly for individual tracks via the track menu.</string>
                    </void>
                    <void property="name">
                     <string>featureVisibilityWindowField</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>featureVisibilityWindowFieldActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.FocusListener</string>
                      <string>focusLost</string>
                      <string>featureVisibilityWindowFieldFocusLost</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>4</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>10</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>3</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>font</string>
                     <object idref="Font0"/>
                    </void>
                    <void method="setProperty">
                     <string>text</string>
                     <string>&lt;html&gt;&lt;i&gt;&amp;lt; 0 disables visibility window.&lt;/b&gt;</string>
                    </void>
                    <void method="setProperty">
                     <string>verticalAlignment</string>
                     <int>1</int>
                    </void>
                    <void property="name">
                     <string>zoomToFeatureExplanation3</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>7</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>10</int>
                    </void>
                    <void method="setProperty">
                     <string>vAlign</string>
                     <int>0</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JTextField</string>
                    <void method="setProperty">
                     <string>editable</string>
                     <boolean>false</boolean>
                    </void>
                    <void property="name">
                     <string>defaultFontField</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>1</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>12</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>4</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JButton</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Reset to default</string>
                    </void>
                    <void property="name">
                     <string>resetFontButton</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>resetFontButtonActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>7</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>12</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JCheckBox</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Scale fonts</string>
                    </void>
                    <void property="name">
                     <string>scaleFontsCB</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>scaleFontsCBActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>13</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>2</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>&lt;html&gt;&lt;i&gt;Scale fonts for high resolution screens.  Requires restart.</string>
                    </void>
                    <void property="name">
                     <string>label8</string>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>2</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>13</int>
                    </void>
                    <void method="setProperty">
                     <string>gridwidth</string>
                     <int>7</int>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JButton</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Reset to default</string>
                    </void>
                    <void property="name">
                     <string>resetBackgroundButton</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>resetBackgroundButtonActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                   <object class="com.jformdesigner.model.FormLayoutConstraints">
                    <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                    <void method="setProperty">
                     <string>gridx</string>
                     <int>7</int>
                    </void>
                    <void method="setProperty">
                     <string>gridy</string>
                     <int>14</int>
                    </void>
                   </object>
                  </void>
                 </object>
                 <object class="com.jformdesigner.model.FormLayoutConstraints">
                  <class>java.lang.String</class>
                  <void method="setProperty">
                   <string>value</string>
                   <string>Center</string>
                  </void>
                 </object>
                </void>
               </object>
              </void>
             </object>
             <object class="com.jformdesigner.model.FormLayoutConstraints">
              <null/>
              <void method="setProperty">
               <string>title</string>
               <string>General</string>
              </void>
             </object>
            </void>
            <void method="add">
             <object class="com.jformdesigner.model.FormContainer">
              <string>javax.swing.JScrollPane</string>
              <object class="com.jformdesigner.model.FormLayoutManager">
               <class>javax.swing.JScrollPane</class>
              </object>
              <void property="name">
               <string>panel23</string>
              </void>
              <void method="add">
               <object class="com.jformdesigner.model.FormContainer">
                <string>javax.swing.JPanel</string>
                <object class="com.jformdesigner.model.FormLayoutManager">
                 <class>java.awt.GridBagLayout</class>
                 <void method="setProperty">
                  <string>$columnSpecs</string>
                  <string>0, 0, 0, 0, 0, 0, 0, 0</string>
                 </void>
                 <void method="setProperty">
                  <string>$rowSpecs</string>
                  <string>0, 0, 0, 0, 0, 0, 0, 0, 0, 0</string>
                 </void>
                 <void method="setProperty">
                  <string>$hGap</string>
                  <int>10</int>
                 </void>
                 <void method="setProperty">
                  <string>$vGap</string>
                  <int>15</int>
                 </void>
                 <void method="setProperty">
                  <string>$alignLeft</string>
                  <boolean>true</boolean>
                 </void>
                 <void method="setProperty">
                  <string>$alignTop</string>
                  <boolean>true</boolean>
                 </void>
                </object>
                <void method="setProperty">
                 <string>minimumSize</string>
                 <object class="java.awt.Dimension">
                  <int>700</int>
                  <int>407</int>
                 </object>
                </void>
                <void property="name">
                 <string>tracksPanel</string>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>com.jformdesigner.designer.wrapper.VSpacer</string>
                  <void property="name">
                   <string>vSpacer1</string>
                  </void>
                 </object>
                 <object class="com.jformdesigner.model.FormLayoutConstraints">
                  <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                  <void method="setProperty">
                   <string>gridx</string>
                   <int>1</int>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>javax.swing.JLabel</string>
                  <void method="setProperty">
                   <string>text</string>
                   <string>Default Track Height, Charts (Pixels)</string>
                  </void>
                  <void property="name">
                   <string>jLabel5</string>
                  </void>
                 </object>
                 <object class="com.jformdesigner.model.FormLayoutConstraints">
                  <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                  <void method="setProperty">
                   <string>gridwidth</string>
                   <int>2</int>
                  </void>
                  <void method="setProperty">
                   <string>gridx</string>
                   <int>2</int>
                  </void>
                  <void method="setProperty">
                   <string>gridy</string>
                   <int>1</int>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>javax.swing.JTextField</string>
                  <void method="setProperty">
                   <string>text</string>
                   <string>40</string>
                  </void>
                  <void method="setProperty">
                   <string>minimumSize</string>
                   <object class="java.awt.Dimension">
                    <int>60</int>
                    <int>28</int>
                   </object>
                  </void>
                  <void method="setProperty">
                   <string>toolTipText</string>
                   <string>Default height of chart tracks (barcharts, scatterplots, etc)</string>
                  </void>
                  <void property="name">
                   <string>defaultChartTrackHeightField</string>
                  </void>
                  <void method="addEvent">
                   <object class="com.jformdesigner.model.FormEvent">
                    <string>java.awt.event.ActionListener</string>
                    <string>actionPerformed</string>
                    <string>defaultChartTrackHeightFieldActionPerformed</string>
                    <boolean>true</boolean>
                   </object>
                  </void>
                  <void method="addEvent">
                   <object class="com.jformdesigner.model.FormEvent">
                    <string>java.awt.event.FocusListener</string>
                    <string>focusLost</string>
                    <string>defaultChartTrackHeightFieldFocusLost</string>
                    <boolean>true</boolean>
                   </object>
                  </void>
                 </object>
                 <object class="com.jformdesigner.model.FormLayoutConstraints">
                  <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                  <void method="setProperty">
                   <string>gridx</string>
                   <int>4</int>
                  </void>
                  <void method="setProperty">
                   <string>gridwidth</string>
                   <int>2</int>
                  </void>
                  <void method="setProperty">
                   <string>gridy</string>
                   <int>1</int>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>javax.swing.JLabel</string>
                  <void method="setProperty">
                   <string>text</string>
                   <string>Track Name Attribute</string>
                  </void>
                  <void method="setProperty">
                   <string>toolTipText</string>
                   <string>Name of an attribute to be used to label tracks.  If provided, tracks will be labeled with the corresponding attribute values from the sample information file</string>
                  </void>
                  <void property="name">
                   <string>trackNameAttributeLabel</string>
                  </void>
                 </object>
                 <object class="com.jformdesigner.model.FormLayoutConstraints">
                  <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                  <void method="setProperty">
                   <string>gridy</string>
                   <int>3</int>
                  </void>
                  <void method="setProperty">
                   <string>gridx</string>
                   <int>2</int>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>javax.swing.JTextField</string>
                  <void property="name">
                   <string>trackNameAttributeField</string>
                  </void>
                  <void method="addEvent">
                   <object class="com.jformdesigner.model.FormEvent">
                    <string>java.awt.event.ActionListener</string>
                    <string>actionPerformed</string>
                    <string>trackNameAttributeFieldActionPerformed</string>
                    <boolean>true</boolean>
                   </object>
                  </void>
                  <void method="addEvent">
                   <object class="com.jformdesigner.model.FormEvent">
                    <string>java.awt.event.FocusListener</string>
                    <string>focusLost</string>
                    <string>trackNameAttributeFieldFocusLost</string>
                    <boolean>true</boolean>
                   </object>
                  </void>
                 </object>
                 <object class="com.jformdesigner.model.FormLayoutConstraints">
                  <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                  <void method="setProperty">
                   <string>gridx</string>
                   <int>3</int>
                  </void>
                  <void method="setProperty">
                   <string>gridy</string>
                   <int>3</int>
                  </void>
                  <void method="setProperty">
                   <string>gridwidth</string>
                   <int>3</int>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>javax.swing.JLabel</string>
                  <void method="setProperty">
                   <string>text</string>
                   <string>Default Track Height, Other (Pixels)</string>
                  </void>
                  <void property="name">
                   <string>jLabel8</string>
                  </void>
                 </object>
                 <object class="com.jformdesigner.model.FormLayoutConstraints">
                  <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                  <void method="setProperty">
                   <string>gridy</string>
                   <int>2</int>
                  </void>
                  <void method="setProperty">
                   <string>gridwidth</string>
                   <int>2</int>
                  </void>
                  <void method="setProperty">
                   <string>gridx</string>
                   <int>2</int>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>javax.swing.JTextField</string>
                  <void method="setProperty">
                   <string>text</string>
                   <string>15</string>
                  </void>
                  <void method="setProperty">
                   <string>minimumSize</string>
                   <object class="java.awt.Dimension">
                    <int>60</int>
                    <int>28</int>
                   </object>
                  </void>
                  <void property="name">
                   <string>defaultTrackHeightField</string>
                  </void>
                  <void method="addEvent">
                   <object class="com.jformdesigner.model.FormEvent">
                    <string>java.awt.event.ActionListener</string>
                    <string>actionPerformed</string>
                    <string>defaultTrackHeightFieldActionPerformed</string>
                    <boolean>true</boolean>
                   </object>
                  </void>
                  <void method="addEvent">
                   <object class="com.jformdesigner.model.FormEvent">
                    <string>java.awt.event.FocusListener</string>
                    <string>focusLost</string>
                    <string>defaultTrackHeightFieldFocusLost</string>
                    <boolean>true</boolean>
                   </object>
                  </void>
                 </object>
                 <object class="com.jformdesigner.model.FormLayoutConstraints">
                  <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                  <void method="setProperty">
                   <string>gridx</string>
                   <int>4</int>
                  </void>
                  <void method="setProperty">
                   <string>gridy</string>
                   <int>2</int>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>com.jformdesigner.designer.wrapper.HSpacer</string>
                  <void property="name">
                   <string>hSpacer1</string>
                  </void>
                 </object>
                 <object class="com.jformdesigner.model.FormLayoutConstraints">
                  <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>javax.swing.JCheckBox</string>
                  <void method="setProperty">
                   <string>text</string>
                   <string>Expand Feature Tracks</string>
                  </void>
                  <void property="name">
                   <string>expandCB</string>
                  </void>
                  <void method="addEvent">
                   <object class="com.jformdesigner.model.FormEvent">
                    <string>java.awt.event.ActionListener</string>
                    <string>actionPerformed</string>
                    <string>expandCBActionPerformed</string>
                    <boolean>true</boolean>
                   </object>
                  </void>
                 </object>
                 <object class="com.jformdesigner.model.FormLayoutConstraints">
                  <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                  <void method="setProperty">
                   <string>gridy</string>
                   <int>5</int>
                  </void>
                  <void method="setProperty">
                   <string>gridwidth</string>
                   <int>2</int>
                  </void>
                  <void method="setProperty">
                   <string>gridx</string>
                   <int>2</int>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>javax.swing.JCheckBox</string>
                  <void method="setProperty">
                   <string>text</string>
                   <string>Normalize Coverage Data</string>
                  </void>
                  <void property="name">
                   <string>normalizeCoverageCB</string>
                  </void>
                  <void method="addEvent">
                   <object class="com.jformdesigner.model.FormEvent">
                    <string>java.awt.event.ActionListener</string>
                    <string>actionPerformed</string>
                    <string>normalizeCoverageCBActionPerformed</string>
                    <boolean>true</boolean>
                   </object>
                  </void>
                  <void method="addEvent">
                   <object class="com.jformdesigner.model.FormEvent">
                    <string>java.awt.event.FocusListener</string>
                    <string>focusLost</string>
                    <string>normalizeCoverageCBFocusLost</string>
                    <boolean>true</boolean>
                   </object>
                  </void>
                 </object>
                 <object class="com.jformdesigner.model.FormLayoutConstraints">
                  <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                  <void method="setProperty">
                   <string>gridy</string>
                   <int>6</int>
                  </void>
                  <void method="setProperty">
                   <string>gridwidth</string>
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                  <void property="name">
                   <string>jPanel11</string>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormContainer">
                    <string>javax.swing.JPanel</string>
                    <object class="com.jformdesigner.model.FormLayoutManager">
                     <class>java.awt.FlowLayout</class>
                     <void method="setProperty">
                      <string>alignment</string>
                      <int>0</int>
                     </void>
                    </object>
                    <void property="name">
                     <string>panel32</string>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JLabel</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>On initial load show:</string>
                      </void>
                      <void property="name">
                       <string>label39</string>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JCheckBox</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Alignment Track</string>
                      </void>
                      <void method="setProperty">
                       <string>horizontalAlignment</string>
                       <int>2</int>
                      </void>
                      <void property="name">
                       <string>showAlignmentTrackCB</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>showAlignmentTrackCBActionPerformed</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JCheckBox</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Coverage Track</string>
                      </void>
                      <void property="name">
                       <string>showCovTrackCB</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>showCovTrackCBActionPerformed</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JCheckBox</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Splice Junction Track</string>
                      </void>
                      <void property="name">
                       <string>showJunctionTrackCB</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>showJunctionTrackCBActionPerformed</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                   </object>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormContainer">
                  <string>javax.swing.JPanel</string>
                  <object class="com.jformdesigner.model.FormLayoutManager">
                   <class>javax.swing.BoxLayout</class>
                   <void method="setProperty">
                    <string>axis</string>
                    <int>1</int>
                   </void>
                  </object>
                  <void method="setProperty">
                   <string>border</string>
                   <object class="javax.swing.border.TitledBorder">
                    <string>Alignment Track Options</string>
                   </object>
                  </void>
                  <void property="name">
                   <string>jPanel12</string>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormContainer">
                    <string>javax.swing.JPanel</string>
                    <object class="com.jformdesigner.model.FormLayoutManager">
                     <class>java.awt.GridLayout</class>
                     <void method="setProperty">
                      <string>rows</string>
                      <int>7</int>
                     </void>
                    </object>
                    <void property="name">
                     <string>panel13</string>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormContainer">
                      <string>javax.swing.JPanel</string>
                      <object class="com.jformdesigner.model.FormLayoutManager">
                       <class>java.awt.FlowLayout</class>
                       <void method="setProperty">
                        <string>alignment</string>
                        <int>0</int>
                       </void>
                      </object>
                      <void property="name">
                       <string>panel31</string>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JLabel</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>Visibility range threshold (kb):</string>
                        </void>
                        <void method="setProperty">
                         <string>preferredSize</string>
                         <object class="java.awt.Dimension">
                          <int>250</int>
                          <int>16</int>
                         </object>
                        </void>
                        <void property="name">
                         <string>jLabel11</string>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JTextField</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>jTextField1</string>
                        </void>
                        <void method="setProperty">
                         <string>preferredSize</string>
                         <object class="java.awt.Dimension">
                          <int>80</int>
                          <int>28</int>
                         </object>
                        </void>
                        <void property="name">
                         <string>samMaxWindowSizeField</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.FocusListener</string>
                          <string>focusLost</string>
                          <string>samMaxWindowSizeFieldFocusLost</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>samMaxWindowSizeFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JLabel</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>&lt;html&gt;&lt;i&gt;Range at which alignments become visible</string>
                        </void>
                        <void property="name">
                         <string>jLabel12</string>
                        </void>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormContainer">
                      <string>javax.swing.JPanel</string>
                      <object class="com.jformdesigner.model.FormLayoutManager">
                       <class>java.awt.FlowLayout</class>
                       <void method="setProperty">
                        <string>alignment</string>
                        <int>0</int>
                       </void>
                       <void method="setProperty">
                        <string>hgap</string>
                        <int>0</int>
                       </void>
                      </object>
                      <void method="setProperty">
                       <string>border</string>
                       <object class="com.jformdesigner.model.FormObject" field="NULL_VALUE"/>
                      </void>
                      <void property="name">
                       <string>panel4</string>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JCheckBox</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>Downsample reads</string>
                        </void>
                        <void method="setProperty">
                         <string>horizontalAlignment</string>
                         <int>2</int>
                        </void>
                        <void property="name">
                         <string>downsampleReadsCB</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>downsampleReadsCBActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>com.jformdesigner.designer.wrapper.HSpacer</string>
                        <void property="name">
                         <string>hSpacer3</string>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JLabel</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>Max read count:</string>
                        </void>
                        <void property="name">
                         <string>label23</string>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JTextField</string>
                        <void method="setProperty">
                         <string>preferredSize</string>
                         <object class="java.awt.Dimension">
                          <int>100</int>
                          <int>28</int>
                         </object>
                        </void>
                        <void property="name">
                         <string>samDownsampleCountField</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>samDownsampleCountFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.FocusListener</string>
                          <string>focusLost</string>
                          <string>samDownsampleCountFieldFocusLost</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JLabel</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>per window size (bases):</string>
                        </void>
                        <void property="name">
                         <string>jLabel13</string>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JTextField</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>jTextField1</string>
                        </void>
                        <void method="setProperty">
                         <string>preferredSize</string>
                         <object class="java.awt.Dimension">
                          <int>100</int>
                          <int>28</int>
                         </object>
                        </void>
                        <void property="name">
                         <string>samSamplingWindowField</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>samSamplingWindowFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.FocusListener</string>
                          <string>focusLost</string>
                          <string>samSamplingWindowFieldFocusLost</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormContainer">
                      <string>javax.swing.JPanel</string>
                      <object class="com.jformdesigner.model.FormLayoutManager">
                       <class>java.awt.FlowLayout</class>
                       <void method="setProperty">
                        <string>alignment</string>
                        <int>0</int>
                       </void>
                       <void method="setProperty">
                        <string>hgap</string>
                        <int>0</int>
                       </void>
                      </object>
                      <void method="setProperty">
                       <string>border</string>
                       <object class="com.jformdesigner.model.FormObject" field="NULL_VALUE"/>
                      </void>
                      <void property="name">
                       <string>panel11</string>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JCheckBox</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>Shade mismatched bases by quality:</string>
                        </void>
                        <void property="name">
                         <string>samShadeMismatchedBaseCB</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>samShadeMismatchedBaseCBActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JTextField</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>0</string>
                        </void>
                        <void method="setProperty">
                         <string>preferredSize</string>
                         <object class="java.awt.Dimension">
                          <int>60</int>
                          <int>28</int>
                         </object>
                        </void>
                        <void property="name">
                         <string>samMinBaseQualityField</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>samMinBaseQualityFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.FocusListener</string>
                          <string>focusLost</string>
                          <string>samMinBaseQualityFieldFocusLost</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JLabel</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>to</string>
                        </void>
                        <void property="name">
                         <string>label2</string>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JTextField</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>0</string>
                        </void>
                        <void method="setProperty">
                         <string>preferredSize</string>
                         <object class="java.awt.Dimension">
                          <int>60</int>
                          <int>28</int>
                         </object>
                        </void>
                        <void property="name">
                         <string>samMaxBaseQualityField</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>samMaxBaseQualityFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.FocusListener</string>
                          <string>focusLost</string>
                          <string>samMaxBaseQualityFieldFocusLost</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormContainer">
                      <string>javax.swing.JPanel</string>
                      <object class="com.jformdesigner.model.FormLayoutManager">
                       <class>java.awt.FlowLayout</class>
                       <void method="setProperty">
                        <string>alignment</string>
                        <int>0</int>
                       </void>
                      </object>
                      <void property="name">
                       <string>panel12</string>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JLabel</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>Mapping quality threshold:</string>
                        </void>
                        <void property="name">
                         <string>jLabel15</string>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JTextField</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>0</string>
                        </void>
                        <void method="setProperty">
                         <string>preferredSize</string>
                         <object class="java.awt.Dimension">
                          <int>60</int>
                          <int>28</int>
                         </object>
                        </void>
                        <void property="name">
                         <string>mappingQualityThresholdField</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>mappingQualityThresholdFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.FocusListener</string>
                          <string>focusLost</string>
                          <string>mappingQualityThresholdFieldFocusLost</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormContainer">
                      <string>javax.swing.JPanel</string>
                      <object class="com.jformdesigner.model.FormLayoutManager">
                       <class>java.awt.FlowLayout</class>
                       <void method="setProperty">
                        <string>alignment</string>
                        <int>0</int>
                       </void>
                       <void method="setProperty">
                        <string>hgap</string>
                        <int>0</int>
                       </void>
                      </object>
                      <void method="setProperty">
                       <string>border</string>
                       <object class="com.jformdesigner.model.FormObject" field="NULL_VALUE"/>
                      </void>
                      <void property="name">
                       <string>panel10</string>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JCheckBox</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>Label indels &gt; </string>
                        </void>
                        <void property="name">
                         <string>samFlagIndelsCB</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>samFlagIndelsCBActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JTextField</string>
                        <void method="setProperty">
                         <string>preferredSize</string>
                         <object class="java.awt.Dimension">
                          <int>60</int>
                          <int>26</int>
                         </object>
                        </void>
                        <void property="name">
                         <string>samFlagIndelsThresholdField</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>samFlagIndelsThresholdFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.FocusListener</string>
                          <string>focusLost</string>
                          <string>samFlagIndelsThresholdFieldFocusLost</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>samFlagIndelsThresholdFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JLabel</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string> bases</string>
                        </void>
                        <void property="name">
                         <string>label31</string>
                        </void>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormContainer">
                      <string>javax.swing.JPanel</string>
                      <object class="com.jformdesigner.model.FormLayoutManager">
                       <class>java.awt.FlowLayout</class>
                       <void method="setProperty">
                        <string>alignment</string>
                        <int>0</int>
                       </void>
                       <void method="setProperty">
                        <string>hgap</string>
                        <int>0</int>
                       </void>
                      </object>
                      <void method="setProperty">
                       <string>border</string>
                       <object class="com.jformdesigner.model.FormObject" field="NULL_VALUE"/>
                      </void>
                      <void property="name">
                       <string>panel10clip</string>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JCheckBox</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>Flag clipping &gt; </string>
                        </void>
                        <void property="name">
                         <string>samFlagClippingCB</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>samFlagClippingCBActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JTextField</string>
                        <void method="setProperty">
                         <string>preferredSize</string>
                         <object class="java.awt.Dimension">
                          <int>60</int>
                          <int>26</int>
                         </object>
                        </void>
                        <void property="name">
                         <string>samFlagClippingThresholdField</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>samFlagClippingThresholdFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.FocusListener</string>
                          <string>focusLost</string>
                          <string>samFlagClippingThresholdFieldFocusLost</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>samFlagClippingThresholdFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JLabel</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string> bases</string>
                        </void>
                        <void property="name">
                         <string>label31clip</string>
                        </void>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormContainer">
                      <string>javax.swing.JPanel</string>
                      <object class="com.jformdesigner.model.FormLayoutManager">
                       <class>java.awt.FlowLayout</class>
                       <void method="setProperty">
                        <string>alignment</string>
                        <int>0</int>
                       </void>
                       <void method="setProperty">
                        <string>hgap</string>
                        <int>0</int>
                       </void>
                      </object>
                      <void property="name">
                       <string>panel9</string>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JCheckBox</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>Hide indels &lt; </string>
                        </void>
                        <void property="name">
                         <string>hideIndelsBasesCB</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>hideIndelsBasesCBActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JTextField</string>
                        <void method="setProperty">
                         <string>preferredSize</string>
                         <object class="java.awt.Dimension">
                          <int>60</int>
                          <int>26</int>
                         </object>
                        </void>
                        <void property="name">
                         <string>hideIndelsBasesField</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>hideIndelsBasesFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.FocusListener</string>
                          <string>focusLost</string>
                          <string>hideIndelsBasesFieldFocusLost</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JLabel</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string> bases</string>
                        </void>
                        <void property="name">
                         <string>label45</string>
                        </void>
                       </object>
                      </void>
                     </object>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormContainer">
                    <string>javax.swing.JPanel</string>
                    <object class="com.jformdesigner.model.FormLayoutManager">
                     <class>java.awt.GridLayout</class>
                     <void method="setProperty">
                      <string>columns</string>
                      <int>1</int>
                     </void>
                     <void method="setProperty">
                      <string>rows</string>
                      <int>4</int>
                     </void>
                    </object>
                    <void property="name">
                     <string>panel8</string>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JCheckBox</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Filter duplicate reads</string>
                      </void>
                      <void property="name">
                       <string>samFilterDuplicatesCB</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>samShowDuplicatesCBActionPerformed</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JCheckBox</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Flag unmapped pairs</string>
                      </void>
                      <void property="name">
                       <string>samFlagUnmappedPairCB</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>samFlagUnmappedPairCBActionPerformed</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JCheckBox</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Filter vendor failed reads</string>
                      </void>
                      <void property="name">
                       <string>filterFailedReadsCB</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>filterVendorFailedReadsCBActionPerformed</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JCheckBox</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Show soft-clipped bases</string>
                      </void>
                      <void property="name">
                       <string>showSoftClippedCB</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>showSoftClippedCBActionPerformed</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JCheckBox</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Filter secondary alignments</string>
                      </void>
                      <void property="name">
                       <string>filterSecondaryAlignmentsCB</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>filterSecondaryAlignmentsCBActionPerformed</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JCheckBox</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Quick consensus mode</string>
                      </void>
                      <void property="name">
                       <string>quickConsensusModeCB</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>quickConsensusModeCBActionPerformed</string>
                        <boolean>false</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JCheckBox</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Show center line</string>
                      </void>
                      <void property="name">
                       <string>showCenterLineCB</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>showCenterLineCBActionPerformed</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JCheckBox</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Filter supplementary alignments</string>
                      </void>
                      <void property="name">
                       <string>filterSupplementaryAlignmentsCB</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>filterSupplementaryAlignmentsCBActionPerformed</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormContainer">
                    <string>javax.swing.JPanel</string>
                    <object class="com.jformdesigner.model.FormLayoutManager">
                     <class>java.awt.FlowLayout</class>
                     <void method="setProperty">
                      <string>alignment</string>
                      <int>0</int>
                     </void>
                    </object>
                    <void property="name">
                     <string>panel31b</string>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JLabel</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Hidden SAM tags:</string>
                      </void>
                      <void method="setProperty">
                       <string>preferredSize</string>
                       <object class="java.awt.Dimension">
                        <int>120</int>
                        <int>16</int>
                       </object>
                      </void>
                      <void property="name">
                       <string>jLabel11b</string>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JTextField</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>jTextField1b</string>
                      </void>
                      <void method="setProperty">
                       <string>preferredSize</string>
                       <object class="java.awt.Dimension">
                        <int>250</int>
                        <int>28</int>
                       </object>
                      </void>
                      <void property="name">
                       <string>samHiddenTagsField</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.FocusListener</string>
                        <string>focusLost</string>
                        <string>samHiddenTagsFieldFocusLost</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>samHiddenTagsFieldActionPerformed</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                   </object>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>com.jformdesigner.designer.wrapper.VSpacer</string>
                  <void method="setProperty">
                   <string>preferredSize</string>
                   <object class="java.awt.Dimension">
                    <int>10</int>
                    <int>5</int>
                   </object>
                  </void>
                  <void property="name">
                   <string>vSpacer5</string>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormContainer">
                  <string>javax.swing.JPanel</string>
                  <object class="com.jformdesigner.model.FormLayoutManager">
                   <class>java.awt.FlowLayout</class>
                   <void method="setProperty">
                    <string>alignment</string>
                    <int>0</int>
                   </void>
                  </object>
                  <void method="setProperty">
                   <string>border</string>
                   <object class="javax.swing.border.TitledBorder">
                    <string>Coverage Track Options</string>
                   </object>
                  </void>
                  <void property="name">
                   <string>panel34</string>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormContainer">
                    <string>javax.swing.JPanel</string>
                    <object class="com.jformdesigner.model.FormLayoutManager">
                     <class>java.awt.FlowLayout</class>
                     <void method="setProperty">
                      <string>alignment</string>
                      <int>0</int>
                     </void>
                    </object>
                    <void property="name">
                     <string>panel5</string>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JLabel</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>Coverage allele-fraction threshold:</string>
                      </void>
                      <void property="name">
                       <string>jLabel26</string>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>javax.swing.JTextField</string>
                      <void method="setProperty">
                       <string>text</string>
                       <string>0</string>
                      </void>
                      <void method="setProperty">
                       <string>preferredSize</string>
                       <object class="java.awt.Dimension">
                        <int>60</int>
                        <int>28</int>
                       </object>
                      </void>
                      <void property="name">
                       <string>snpThresholdField</string>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.ActionListener</string>
                        <string>actionPerformed</string>
                        <string>snpThresholdFieldActionPerformed</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                      <void method="addEvent">
                       <object class="com.jformdesigner.model.FormEvent">
                        <string>java.awt.event.FocusListener</string>
                        <string>focusLost</string>
                        <string>snpThresholdFieldFocusLost</string>
                        <boolean>true</boolean>
                       </object>
                      </void>
                     </object>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormComponent">
                      <string>com.jformdesigner.designer.wrapper.HSpacer</string>
                      <void method="setProperty">
                       <string>preferredSize</string>
                       <object class="java.awt.Dimension">
                        <int>50</int>
                        <int>10</int>
                       </object>
                      </void>
                      <void property="name">
                       <string>hSpacer2</string>
                      </void>
                     </object>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JCheckBox</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Quality weight allele fraction</string>
                    </void>
                    <void property="name">
                     <string>useAlleleQualityCB</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>useAlleleQualityCBActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormContainer">
                  <string>javax.swing.JPanel</string>
                  <object class="com.jformdesigner.model.FormLayoutManager">
                   <class>java.awt.FlowLayout</class>
                   <void method="setProperty">
                    <string>alignment</string>
                    <int>0</int>
                   </void>
                  </object>
                  <void method="setProperty">
                   <string>border</string>
                   <object class="javax.swing.border.TitledBorder">
                    <string>Splice Junction Track Options</string>
                   </object>
                  </void>
                  <void property="name">
                   <string>panel3</string>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JCheckBox</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Show flanking regions</string>
                    </void>
                    <void property="name">
                     <string>showJunctionFlankingRegionsCB</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>showJunctionFlankingRegionsCBActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Min flanking width:</string>
                    </void>
                    <void property="name">
                     <string>label15</string>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JTextField</string>
                    <void method="setProperty">
                     <string>preferredSize</string>
                     <object class="java.awt.Dimension">
                      <int>80</int>
                      <int>28</int>
                     </object>
                    </void>
                    <void property="name">
                     <string>junctionFlankingTextField</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>junctionFlankingTextFieldActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.FocusListener</string>
                      <string>focusLost</string>
                      <string>junctionFlankingTextFieldFocusLost</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JLabel</string>
                    <void method="setProperty">
                     <string>text</string>
                     <string>Min junction coverage:</string>
                    </void>
                    <void property="name">
                     <string>label16</string>
                    </void>
                   </object>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormComponent">
                    <string>javax.swing.JTextField</string>
                    <void method="setProperty">
                     <string>preferredSize</string>
                     <object class="java.awt.Dimension">
                      <int>80</int>
                      <int>28</int>
                     </object>
                    </void>
                    <void property="name">
                     <string>junctionCoverageTextField</string>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.ActionListener</string>
                      <string>actionPerformed</string>
                      <string>junctionCoverageTextFieldActionPerformed</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                    <void method="addEvent">
                     <object class="com.jformdesigner.model.FormEvent">
                      <string>java.awt.event.FocusListener</string>
                      <string>focusLost</string>
                      <string>junctionCoverageTextFieldFocusLost</string>
                      <boolean>true</boolean>
                     </object>
                    </void>
                   </object>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormComponent">
                  <string>com.jformdesigner.designer.wrapper.VSpacer</string>
                  <void method="setProperty">
                   <string>preferredSize</string>
                   <object class="java.awt.Dimension">
                    <int>10</int>
                    <int>5</int>
                   </object>
                  </void>
                  <void property="name">
                   <string>vSpacer6</string>
                  </void>
                 </object>
                </void>
                <void method="add">
                 <object class="com.jformdesigner.model.FormContainer">
                  <string>javax.swing.JPanel</string>
                  <object class="com.jformdesigner.model.FormLayoutManager">
                   <class>java.awt.GridLayout</class>
                  </object>
                  <void method="setProperty">
                   <string>border</string>
                   <object class="javax.swing.border.TitledBorder">
                    <string>Insert Size Options</string>
                   </object>
                  </void>
                  <void method="setProperty">
                   <string>toolTipText</string>
                   <string>These options control the color coding of paired alignments by inferred insert size.  Base pair values set default values.  If &quot;compute&quot; is selected, values are computed from the actual size distribution of each library.</string>
                  </void>
                  <void property="name">
                   <string>panel2</string>
                  </void>
                  <void method="add">
                   <object class="com.jformdesigner.model.FormContainer">
                    <string>javax.swing.JPanel</string>
                    <object class="com.jformdesigner.model.FormLayoutManager">
                     <class>java.awt.GridLayout</class>
                    </object>
                    <void property="name">
                     <string>panel19</string>
                    </void>
                    <void method="add">
                     <object class="com.jformdesigner.model.FormContainer">
                      <string>javax.swing.JPanel</string>
                      <object class="com.jformdesigner.model.FormLayoutManager">
                       <class>java.awt.GridBagLayout</class>
                       <void method="setProperty">
                        <string>$columnSpecs</string>
                        <string>0, 0, 0</string>
                       </void>
                       <void method="setProperty">
                        <string>$rowSpecs</string>
                        <string>0, 0</string>
                       </void>
                       <void method="setProperty">
                        <string>$hGap</string>
                        <int>5</int>
                       </void>
                       <void method="setProperty">
                        <string>$vGap</string>
                        <int>5</int>
                       </void>
                       <void method="setProperty">
                        <string>$alignTop</string>
                        <boolean>true</boolean>
                       </void>
                       <void method="setProperty">
                        <string>$alignLeft</string>
                        <boolean>true</boolean>
                       </void>
                      </object>
                      <void property="name">
                       <string>panel16</string>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JLabel</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>Defaults </string>
                        </void>
                        <void property="name">
                         <string>label9</string>
                        </void>
                       </object>
                       <object class="com.jformdesigner.model.FormLayoutConstraints">
                        <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JLabel</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>Minimum (bp):</string>
                        </void>
                        <void property="name">
                         <string>jLabel20</string>
                        </void>
                       </object>
                       <object class="com.jformdesigner.model.FormLayoutConstraints">
                        <class>com.jformdesigner.runtime.GridBagConstraintsEx</class>
                        <void method="setProperty">
                         <string>gridx</string>
                         <int>1</int>
                        </void>
                       </object>
                      </void>
                      <void method="add">
                       <object class="com.jformdesigner.model.FormComponent">
                        <string>javax.swing.JTextField</string>
                        <void method="setProperty">
                         <string>text</string>
                         <string>0</string>
                        </void>
                        <void method="setProperty">
                         <string>preferredSize</string>
                         <object class="java.awt.Dimension">
                          <int>60</int>
                          <int>28</int>
                         </object>
                        </void>
                        <void method="setProperty">
                         <string>minimumSize</string>
                         <object class="java.awt.Dimension">
                          <int>60</int>
                          <int>28</int>
                         </object>
                        </void>
                        <void property="name">
                         <string>insertSizeMinThresholdField</string>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>insertSizeThresholdFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.FocusListener</string>
                          <string>focusLost</string>
                          <string>insertSizeThresholdFieldFocusLost</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.ActionListener</string>
                          <string>actionPerformed</string>
                          <string>insertSizeMinThresholdFieldActionPerformed</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
                        <void method="addEvent">
                         <object class="com.jformdesigner.model.FormEvent">
                          <string>java.awt.event.FocusListener</string>
                          <string>focusLost</string>
                          <string>insertSizeMinThresholdFieldFocusLost</string>
                          <boolean>true</boolean>
                         </object>
                        </void>
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    <void method="add">
     <object class="com.jformdesigner.model.FormNonVisual">
      <string>javax.swing.ButtonGroup</string>
      <void property="name">
       <string>buttonGroup1</string>
      </void>
     </object>
     <object class="com.jformdesigner.model.FormLayoutConstraints">
      <null/>
      <void method="setProperty">
       <string>location</string>
       <object class="java.awt.Point">
        <int>0</int>
        <int>620</int>
       </object>
      </void>
     </object>
    </void>
    <void method="add">
     <object class="com.jformdesigner.model.FormNonVisual">
      <string>javax.swing.ButtonGroup</string>
      <void property="name">
       <string>buttonGroup2</string>
      </void>
     </object>
     <object class="com.jformdesigner.model.FormLayoutConstraints">
      <null/>
      <void method="setProperty">
       <string>location</string>
       <object class="java.awt.Point">
        <int>0</int>
        <int>915</int>
       </object>
      </void>
     </object>
    </void>
   </object>
  </void>
 </object>
</java>
