##maf version=1 scoring=maf_project.v10
# maf_project.v10 raw-tba.maf NC_007605
# tba.v12 ((NC_007605 NC_006146) NC_004367) NC_006146.NC_004367.sing.maf NC_007605.NC_004367.sing.maf NC_007605.NC_006146.sing.maf raw-tba.maf
##maf version=12 scoring=multiz
# maf_project.v10 /tmp/_tba_4218_left.maf1 NC_007605 /tmp/_tba_4218_A
# maf_project.v10 NC_007605.NC_006146.sing.maf NC_007605
# single_cov2.v11 single_cov2 NC_007605.NC_006146.orig.maf
# maf_project.v10 /dev/stdin NC_007605
#
# "blastz NC_007605 NC_006146 Y=3400 H=2000
#    A    C    G    T
#   91 -114  -31 -123
# -114  100 -125  -31
#  -31 -125  100 -114
# -123  -31 -114   91
# O = 400, E = 30, K = 3000, L = 3000, M = 50"
# maf_project.v10 /tmp/_tba_4218_H NC_007605 /tmp/_tba_4218_C
# maf_project.v10 /tmp/_tba_4218_D NC_004367 /tmp/_tba_4218_V
# maf_project.v10 NC_007605.NC_004367.sing.maf NC_007605
# single_cov2.v11 single_cov2 NC_007605.NC_004367.orig.maf
# maf_project.v10 /dev/stdin NC_007605
#
# "blastz NC_007605 NC_004367 Y=3400 H=2000
#    A    C    G    T
#   91 -114  -31 -123
# -114  100 -125  -31
#  -31 -125  100 -114
# -123  -31 -114   91
# O = 400, E = 30, K = 3000, L = 3000, M = 50"
# maf_project.v10 /tmp/_tba_4218_left.maf1 NC_006146 /tmp/_tba_4218_A
# maf_project.v10 /tmp/_tba_4218_L NC_006146 /tmp/_tba_4218_C
# maf_project.v10 /tmp/_tba_4218_D NC_004367 /tmp/_tba_4218_V
# maf_project.v10 NC_006146.NC_004367.sing.maf NC_006146
# single_cov2.v11 single_cov2 NC_006146.NC_004367.orig.maf
# maf_project.v10 /dev/stdin NC_006146
#
# "blastz NC_006146 NC_004367 Y=3400 H=2000
#    A    C    G    T
#   91 -114  -31 -123
# -114  100 -125  -31
#  -31 -125  100 -114
# -123  -31 -114   91
# O = 400, E = 30, K = 3000, L = 3000, M = 50"
# maf_project.v10 /tmp/_tba_4218_right.maf1 NC_004367 /tmp/_tba_4218_V
a score=0.0
s NC_007605.genome 0 57 + 171823 AGAATTCGTCTTGCTCTATTCACCCTTACTTTTCTTCTTGCCCGTTCTCTTTCTTAG

a score=49975.0
s NC_007605.genome  57 1850 + 171823 TATGAATCCAGTATGCCTGCCTGTAATTGTTGCGCCCTACCTCTTTTGGCTGGCGGCTATTGCCGCCTCGTGTTTCACGGCCTCAGTTAGTACCGTTGTGACCGCCACCGGCTTGGCCCTCTCACTTCTACTCTTGGCAGCAGTGGCCAGCTCATATGCCGCTGCACAAAGGAAACTGCTGACACCGGTGACAGTGCTTACTGCGGTTGTCACTTGTGAGTA---CACACGCACCATTTACAATGCATGATGTTCGTGAGATTGATCTGTCTCTAACAGTTCACTTCCTCTGCTTTTCTCCTCAGTCTTTGCAATTTGCCTAACATGGAGGATTGAGGACCCACCTTTTAATTCTCTTCTGTTTGCATTGCTGGCCGCAGCTGGCGGACTACAAGGCATTTACGGTTAGTG----------TGCCTCTG------TTA-TGAAATGCAGGTTTGACTTCATATGTATGCCTTGG---CATGACGTCAACT-------TTACTTTTATTTCAGTTCTGGTGATGCTTGTGCTCCTGATACTAGCGTACAGAAGGAGATGGCGCCGTTTGACTGTTTGTGGCGGCATCATGTTTTTGGCATGTGTACTTGTCCTCATCGTCGACGCTGTTTTGCAGCTGAGTCCCCTCCTTGGAGCTGTAACTGTGGTTTCCATGACGCTGCTGCTACTGGCTTTCGTCCTCTGGCTCTCTTCGCCAGGGGGCCTAGGTACTCTTGGTGCAGCCCTTTTAACATTGGCAGCAGGTAAGCCACA------------CGTGTGACATTGCTTGCCTTTTTGCCACATGTTTTCTGGACACAGGACTAACCATGCCATCTCTGATTATAGCTCTGGCACTGCTAGCGTCACTGATTTTGGGCACACTTAACTTGACTACAATGTTCCTTCTCATGCTCCTATGGACACTTGGTAAGTTTTCCCTTCC---------TTTAACTCATTACTTGTTCTTTTGTAATCGCAGCTCTAACTTGGCATCTCTTTTACAGTGGTTCTCCTGATTTGCTCTTCGTGCTCTTCATGTCCACTGAGCAAGATCCTTCTGGCACGACTGTTCCTATATGCTCTCGCACTCTTGTTGCTAGCCTCCGCGCTAATCGCTGGTGGCAGTATTTTGCAAACAAACTTCAAGAGTTTAAGCAGCACTGAATTTATACCCAGTGAGTATCTATTTGTTACTCCTGTTTAGTT-------------GAAGAAAACAAGCTATTGGATTGTAACACACATTTTACGCTTTGTTCCTTAGATTTGTTCTGCATGTTATTACTGATTGTCGCTGGCATACTCTTCATTCTTGCTATCCTGACCGAATGGGGCAGTGGAAATAGAACATACGGTCCAGTTTTTATGTGCCTCGGTGGCCTGCTCACCATGGTAGCCGGCGCTGTGTGGCTGACGGTGATGTCTAACACGCTTTTGTCTGCCTGGATTCTTACAGCAGGATTCCTGATTTTCCTCATTGGTAAGTGTG----------ACACCAACAGGTGTTGCCTTGTTATGTCACCGTTCTGACACATGACTTACATGGGTTTGGCTTTTGTAGGCTTTGCCCTCTTTGGGGTCATTAGATGCTGCCGCTACTGCTGCTACTACTGCCTTACACTGGAAAGTGAGGAGCGCCCACCGACCCCATATCGCAACACTGTATAAAGGTAAGTATTATTAAATTT----TAGAGACACTATCACGTGTAACTTGACGTGCAAGGATGGAAGAGAGGGGCAGGGAAACGCAAATGCCGGTTGCCCGGTATGGGGGCCCGTTTATTATGGTAAGGCTCTTCGGGCAAGATGGAGAGGCAAACATACAGGAGGAAAGGCTATATGAGCTACTCTCTGACCCACGCTCCGCGCTCGGCCTAGACCCGGGGCCCCTGATTG
s NC_006146.genome 139 1856 + 171096 TATGGCGCCTGGATGGCTGCCCGTGGTTTCTGCACCATATCTTTTCTGGCTGGCTGGAATTGCCGCTTCCTGCTTTTCAGCCTCCGTTAGTGCTCTTGTTGTTACTACCGGCCTTGCTCTCTCACTCTTGCTACTTGCGGCCCTGGTTAACTCATATGCCGCTCAGCGAAGGAAGGCCGTTACTAAGTTAACTATCCTCGTCGGCATTGTTACATGTAAGTATGTCACCCAGACAGAGAACAGTTGTGGAGGCTCGT--------TGCGCTTGCAACCATACGTTATCCTTGTGTATTCTTTCAGTTTTTGCCATTCTCCTGACATGGATTGTCCAGCCTAAACCGAGAGATGCCATTGTCTTTGCCTTATTGACCGGGGCCGCTGTACTACAGGCCATTTACAGTAAGTAGCAGCGTGCTTGGCTCGGGGGTGTTTACTGAGTAACAGGGTGCTCGACTCAGGGGTGTTCTGGGCACCTGAACACAGCTCACATGGTTTCTCTTTTCTCAGTCCTAGTTATGCTGCTCTTCTTGCTCCCCACATACCGGCGGAGATGGCGCAAGATGATTGTTTGCGTCGTTCTCCTGTTTTTGGCCTGTGCCGTGCTCCTCGTTGTCGATGCCATCTGGCAGCTGTCTCCCCTACTCGGATCCATGACAGTGGTAGCGCTGACACTCTTGCTTTTAGCATTCATCATCTGGCTCTCCTCACCTTGGGGCATAGGGGCCCTAGGAGCAGCGCTTCTAACGCTGGCGGCGGGTAAGACACAGTCCGCGGATGATGTTTGAGATGGGTTGT-----------GTGTTTTTCAGACTATGACCTAACTATGTCCTCTATG--TGCAGCCTTGGCTCTCCTGGGATCATTGGTCCTCGGGGAACTTAACCTGGCAACAATGTTCCTCATCATGTTCCTGTGGACTCTTGGTGAGTGCCCCCTTTTCCACGGGTTTGTGACTTTTAACATGTCTATATACAGAAGC----CTAACTATTTGTTTCTTCCACAGTCATTATTCT---------CCTGTGCTCAACATTCCCACAAACTATGTACCTCATGTCTCGGTGGCTGCTGTATGCTCTGTCCCTTTTATTGCTCGCCTCTGCGCTCTTGGCCGGTGGCAGCATTCTCCAAAC------CTGGGGCGGAGACAACACTGAGTTTTTCCCGAGTGAGTAGATGTTCATGA-GCCTGTACGGTGCGCGCCGAGCATAGAAAATTACCACCCATGGGAGAGTAACA--------ACCCCTGTTATTACAGGCTTGTTCTGCATGTTGCTGCTCATCGTTGCCGGCATTCTCTTCATCTTGGCTATCCTGACCGAGTGGGGCACTGGAAGTAAGACATACGGGCCGGTGTTCGTCTGTCTCAGTGGCCTCCTGACCATGGCAGCCGGCCTCGTTTGGGTGGTGCTGATGATCAAAGTTCTCTTGTCAGCATGGATTATAACTGCCGGGTGCTTCATCTTCTTCCTCGGTGAGTGTATGTTCTTTAAGCACAGACAGTCGT--CCAACAAATGGAAC------AACACATCACTAATGCTCACTCGTTAATTACAGGCTTTATCCTATTTGGGATCCTTAAGTTCTGCAGGCTCTGCTGTTTCTGCTGTCTCCGCCTGGAGTCGGGCGACCCCCAAGTAGCAACATATCAAAACAATGTTTAAAGGTAAGCATTATTAAATTTCCAATTGAGG---TCTTACGCATGACTGATTTTGAGATCATGGCGGGGCACAGCCGGGTGCCACAGGCAC------------ACGGGAGTCAGTTTCTTATGATCAGGCTATTTGGGACAGATGGTGAGGGGAACGTACAGGAGCAAAGGCTCTACGAGCTATTATCGAACCCCCGATCAGAACTCGGCCTGTCCACGGGCCCCCTCGTCT

a score=298001.0
s NC_007605.genome  1907 3766 + 171823 CTGAGAACCTGCTGCTAGTGGCGCTGCGTGGCACCAACAACGATCCCAGGCCTCAGCGTCAGGAGAGGGCCAGAGAACTGGCCCTCGTTGGCATTCTACTAGGAAACGGCGAGCAGGGTGAACACTTGGGCACGGAGAGTGCCCTGGAGGC------CTCAGGCAACAACTATGTGTATGCCTACGGACCAGACTGGATGGCAAGGCCTTCCACATGGTCCGCGGAAATCCAGCAATTCCTGCGACTCCTGGGCGCCACGTACGTGCTTCGCGTGGAGATGGGCAGGCAGTTTGGCTTCGAGGTGCATAGAAGCC-GGCCCTCCTTCCGTCAGTTCCAGGCCATCAATCACCTTGTCCTGTTTGACAACGCCCTTCGCAAGTACGA---------TTCCGGCCAGGTGGCGGCGGGCTTCCAGAGGG----CCCTTCTG--------GTGGCCGGGCCAGAGACCGCTGACACGAGGCCGGACCTCCGCAAGCTGAATGAGTGGGTGTTTGGTGGC---AGGGCTGCTGGTGGCAGACAGCTGGCCGACGAGCTAAAGATCGTGTCCGCGCTGCGA-GACACTTACTCGGGCCACTTGGTCCTTCAGCCCACGGAGACCCTTGACACATGGAAGGTGTTGAGCAGGGACACACGAACCGCTCATAGTTT------------------GGAGCACGGATTCATTCATGCCGCGGGGACCATCCAGGCCAACTGCCCACAGCTGTTTATGAGACGCCAGC--ACCCCGGCCTCTTTCCCTTCGTTAATGCAATAGCATCATCGCTGGGCTGGTAC--TACCAGACCGCCACCGGCCCCGGAGCAGATGCCAGGGCGGCGGC--------CCGGCGCCAACAGGCCTTTCAGACCAGGGCGGCGGCTGAATGCCATGCCAAAAGCGGGGTGCCGGTCGTGGCCGGCTTCTACAGGACCATCAACGCCACGCTCAAGGGAGGAGAGGGCCTACAGCCCACTATGTTTAACGGGGAGCTGGGGGCCATCAAGCACCAGGCACTTGACACTGTGAGGTATGACTACGGCCACTATCTCATAATGTTGGGGCCATTCCAGCCATGGAGCGGACTGACGGCCCCTCCGTGCCCCTACGCCGAAAGTTCATGGGCACAGGCGGCCGTGCAGACGGCCCTCGAGCTGTTCTCGGCCCTGTACCCGGCCCCGTGCATCTCGGG----CTACGCGC-GCCCCCCGGGCCCCAGTGCTGTGATCGAGCATCTGGGGTCCCTAGTTCCAAAGGGGGGTCTGCTGTTGTTTCTGTC-------TCACCTA-------CCGGATGATGTTAAGGACGGGCTCGGAGAAATGGGGCCGGCCAGGGCCACGGGACCTGGAATGCAGCAGTTTGTCAGCAGC--TACTTCCTCAACCCCGCCTGTTCCAACGTCTTCATTA----CAGTGAGGCAGCGAGGGGAGAAGATCAACGGCCGTACCGTCCTCCAAGCGCTCGGACGCGCATGCGATATGGCAGGCTGCCAGCACTATGTGCTGGGCTCCACGGTTCCCCTCGGTGGACTCAACTTTGTCAACGACCTGGCGTCCCCGGTTTCCACCGCCGAGATGATGGATGATTTCTCTCCCTTCTTCACCGTGGAGTTTCCCCCGATTCAAGAGGAGGGCGCAAGTTCTCCGGTACCCT----TAGATGTGG--ACGAGAGCATGGACATCTCTCCGTCTTAC---------GAGTTGCCCTGGCTCTCGCTGGAGTCATGCCTCACAAGCATCCTGTCACACCCCACCGTGGGAAGCAAGGAGCACTTGGTCAGGCACACGGACAGGGTCAGCGGAGGACGCGTGGCACAGCAGCCCGGGGTAGGTCCCCTGGACCTGCCGCTGGCGGACTACGCCTTCGTTGCCCACAGTCAGGTCTGGACCAGGCCCGGTGGGGCTCCTCCCTTGCCCTATCGTACC-----TGGGATC-----GAATGACAGAGAAGCTGCTTGTCTCCGCAAAACCCGGCGGAGAGAACGTTAAGGTTTCAGGTACCGTGATTACATTGGGAGAACAGGGGTACAAAGTGTCGTTGGATCTGAGGGAGGGAACCAGGCTGGCAATGGCTGAGGCGCTGCTGAACGCAGCATGTGCCCCAATCTTGGATC---CGGAAGACGTCTTGCTCACCCTGCATCTACACCTGGATCCGCGCCGGGCAGACAACTCGGCCGTGATGGAGGCTATGACGGCGGCGAGTGACTACGCGCGTGGCCTGGGCGTGAAGCTGACCTTTGGCTCGGCCTCCTGCCCC------------GAGACCGGCTCGTC---------CGCCTCCAACTTCATGACCGTGGTGGCCTCTGTCTCCGCCCCAGGGGAATTCTCGGGTCCTCTGATCACGCCAGTGCTTCAGAAGACGGGCAGTCTCCTGATTGCGGTGCGTTGCGGGGATGGCAAGATCCAGGGAGGGTCGCTGTTTGAGCAGCTCTTTAGCGACGTGGCCACGACCCCACGGGCACCCGAGGCGTTGTCTCTGAAGAATCTCTTCCGGGCAGTCCAGCAGCTGGTCAAGAGCGGCATCGTGCTGTCAGGGCATGACATCAGCGACGGGGGCCTGGTGACCTGCCTGGTGGAGATGGCCCTGGCCGGGCAGCGGGGAGTGACCATCACTATGCCGGTGGCCTCCGACTACCTCCCGGAGATGTTTGCAGAGCACCCCGGCCTGGTGTTTGAGGT------------GGAGGAGCGCAGCGTGGGTGAGGTGCTGCAGACCCTGCGCTCCATGAACATGTACCCGGCAGTCC---TCGGTCGAGTGGGCGAGCAAGGTCCAGATCAAATGTTTGAGGTGCAGCACGGCCCAGAGACGGTGTTGCGCCAGTCGCTGCGCCTGCTGCTGGGAACCTGGTCATCCTTTGCCAGCGAGCAGTACGAGTGCCTGCGACCAGATCGGATTAACCGGTCCATGCACGTGTCCGACTACGGCTATAACGAAGCACTGGCAGTCTCCCCGTTGA------CAGGAAAGAATCTCA-----GCCCACGCCGGTTGGTGACAGAGCCTGACCCACGATGTCAGGTGGCCGTGCTATGCGCCCCGGGCACCAGGGGCCATGAAAGCCTCCTGGCGGCCTTCACGAATGCCGGATGCCTGTGCCGACGGGTGTTCTTTCGCGAGGTTAGGGACAACACGTTCCTCGACAAGTACGTGGGTCTGGCCATCGGAGGAGTTCATGGGGCCAGGGACTCTGCCCTGGCAGGCCGTGCCACCGTGGCGCTGATTAATCGTTTCCCCGCCCTGCGTGACGCTATTCTAAAGTTCCTCAACAGGCCAGATACGTTCTCGGTGGCCTTGGGGGAGCTGGG-GGTGCAAGTTTTGGCTGGCCTGGGGGCCGTGGG--GT-CAACAGATAATCCACCCGCCCCTGGCGTGGAAGTTAATGTC-----------CAGAGATCACCTCTGATTCTGGCCCCCAACGCCTCTGGCATGTTTGAGTCCCGCTGGCTGAACATTAGCATCCCGGCGACCACCAGCTCTGTCATGCTGCGTGGCCTCCGGGGCTGCGTCCTGCCTTGTTGGGTGCAAGGCTCGTGCCTGGGCCTGCAATTTACTAACCTCGGGAT-GCCATATGTTTTGCAGAATGCCCACCAGAT----CGCCTGC-CACTTCCACAGCAATGGCACGGATGCCTGGCGCTTTGCTATGAATTATCCAAGAAACCCCACGGAGCAGGGCAACATTGCAGGGCTCTGTTCACGCGATGGTCGTCATCTGGCTCTCCTGTGTGACCCCTCACTTTGTACAGACTTTTGGCAATGGGAGCACATTCCCCCCGCCTTTGGGCACCCCACGGGGTGCTCCCCCTGGACACTTATGTTTCAAGCAGCTCACCTATGGTCACTCAGGCA
s NC_006146.genome  1995 3766 + 171096 CCGAGAACCTGCTGACAGTCGCGCTGCGGGGCGGCAACGATGACCCTAGGCCTCAGCGCCAAGAGAGGGCCCGAGAGTTGGCCCTCGTCGGCATTCTATTGGGCAACAGCGAGCAAGGAGAACGCCTCGGCACGGAGAGCGCCCTAAATGC------CTTGAGGAACAAGTATGTTTATGCCTACGGACCAGACTGGATGGCCAGACCCTCGACATGGTCCGCGGAAATCCAGCAGTTCCTGCGCCTCCTGGGCACAAAGTACGTGTTGCGCGTGGAGCTTGGCCGACAGTTTGGCTTTGAGGT-CACCGGAGCCAGGCCCTCCTTCCGACAGTTCCAGGCCATCAACCACATTGTCCTCTTTGACAACGTCCTGCGCAAGTACGA---------GCCGGGACAGGCGTCCGCGGGCTTCCAGAGGG----CTCTGTTG--------GTCCCCGGCCCCCCGACCGTGGACGTGAGGCCGGATCTGCGCACCGTCAACGAGTGGGTCTTTGGCGGT---GTGGCCGGCGGGGGCAGGCAGCTGGCCGACGAGCTGATGATAGTGTCGCCGCTGCGA-GACACCTACTCGGGGCACCTGGTTCTTCAGCCCACTGAGGCTCTGGACGTTTGGAGGGCGTCGAATAGGGAGAGGGAAGCAACACACAGTCT------------------GGAGCACGGCTTCGTCCACACGGCGGGGACCATCCAGCCCAACTGCCCTCAGCTGTTTATGAGACGGCAGC--ACCCTGGCCTTTTCCCCTTCGTTAGTGCAATAGCATCGTCGCTTGGTTGGTAC--TACCCGGCCCTCGCAGGCCCAAGCCCGGATGTCAGGGAAGACGC--------CAGGCGCCAGCAGGCCTTCCAGACCAAGGCGGTGGCGGAATGTCACGCCAGGAGCGGGGTGCCGGTTGTGGCCGGCTTCTACCGGACCGTCGACACCACTCTTAGAGGAGGAGAGGGCCTGACGCCCACCATGTTTACCGGGGAGCTGGGAGTCATCAGACACCAGGCGCTGGACACCGCGAGGTACGAGTACGGCCAGTACCTGGTCATGCTGGGGCCTTTCCATCCCTGGAGCAACCTCACCGCACCTCCGTGCCCCTACGCCGAGAGCGCGTTGGCCCAGGCTACCGTCCAGACCGCTCTGGAGCTCTTCTCCGGCCTCTATCCGGCACCGTGCGTCTCGAG----CCATGCGC-GCCCACCCGGCCCCTGCGCCCTGATCGAGCACCTGCGATCTCTGGTTCAGAAAGGGGGGCTGCTGCTGTTCCTGTC-------CCACCTG-------CCGGAGGATGTGAAGGGGGGGATAGGGGACCTGGGGACGGCGCAGGCCACGAGCCGGGGGATAAAGCAGTACGTCGAAACC--TACTTTCTCAATCCAAACTGCTCCAACGTGTTCCTGA----TTGTGAGGCAGCGGGGGGAGAAAATCAACGGCCGCGGCGTCCTACAGGCCCTGAAGCGTGCCTGTGAAGTGGCAGGGTGCCAATACTACGTGCTGGGCTCCACGGTCCCGCTCGGGGGGCTAAACTTCGTCAACGACCTGGCTTCCCCCGTATCCACCGCAGAGATGACGGATGACTTTGCCCCCTTCTTCAGCGTGGAATTTCCCTCCATCCCAGAGGGCGAAATGAAATCCCCCGTCCACT----CAGACACGG--AAGAGCGCATGGACGTCTCCCCCTCTCAC---------GAGTCTTCCTGGCTCTCGCTGAGCTCCTGCCTCACCAGCGTTCTGTCACACCCCAGCGTGGGGAGCAAAGAGCACCTGGTCAGACACACAGACAGGGTCTCTGGGGGCCGCGTGGCCCTTCAGCCCGGGGTGGGTCCCCTAGACCTGCCACTTGCCGATTACGCCTTTGTGGCCCACAGTCAGGTCTGGGTCAGGCCAGGCGGGGCACCCCCGCTGCCCTACCGGACC-----TGGGATC-----GCATGAACGAGAAGCTGCTGGTCTCGGCGAGGCCCACCGACGAGGCCCCCAAGGTCTCGGGTACCGTGATTACATTGGGAGAACAGGGGTACAAGGTCACGCTGGATCCGATAGAGGGCACCAAGCTGGCCATGGTCGAGGCGCTGATGAACGCGGCCTTTGCCCCGCTCGTGAATC---CGGAAGACGTCCTGCTCACTCTGAATCTCCACGCGGACCCGGGCCGCGTCGACAGCACCGCGGTCATGGACTTGATGACGGCGGCCAGCGACTACGCGCGTGACCTGGGCGTGAAGCTGACGTACGGCTCGGCCTCCTGCCCC------------GAGACGGGCTCGGC---------GGGAACCGGCTTCATGACGGTGGTGGTCACGGCCTCGGCACGCGGGGAATTCTCCGCTCCCCTGATCACGCCGGTACTGCAGAGATCAGGGAGCCTCCTACTCTCCGTGAGACGCGGGGATGGCAAGATCCAGGGCGGGTCGCTCTTTGAGCAGCTCTTCAGCGACGTGGCCACGGCCCCGCGGGCTCCCCAGGCCGACGCCATGAAGATTATCTTCCGGACGGTCCAGGGGCTGGTGAAAAGCGGCCTCGTGCTCTCGGGGCACGACGTCAGCGACGGGGGGCTGGTTACGTGTCTTGTGGAGATGGCACTGGCGGGCCAGCGGGGGGTGACCATCTCGGTGCCGGCAGCCGCCGACTACCTCCCCCAGCTATTCACCGAGCACCCGGGCCTGGTTTTTGAGGT------------CGAGGAGGGAAACATGACCGAGGTGATGCAGACCCTGCGGGCCCAGAACATATACCCCGCCGTCC---TGGGCCGGGTGGGCGAGGCGGGGGCAGATCAGATGTTTGAGGTGCAGCACGGCTCAGAGACGGTGTTCCGCCAGTCCCTGAGTCTGCTACTGAGCACCTGGTCCACCTTTGCCACCGAGCAGTACGAGTTTCTGCGCCCGGGGCGCCTCAACCGATCCATGCACGTGTCCGACTACGGCGAGAATGAAGCGCTGGCCATCTCGCCGTTAA------CAGGAAAGAATCTCG-----GCCTGCGCCGCCTGGTGACAGAGCCGGACCCTCGCTGTCGGGTGGCCGTGCTCTGTGCCCCGGGGACCAGGGGCCACGAGAGCCTCCTGGCGGCCTTCACTAACGCGGGGTGCCTGTGTCAGCGGGTATATTTCCGCGACGTCAGGGAGACCACGTTCTTTGACAAGTATGCGGGGCTGGCCGTTGGAGGCGTCCACGCGGCCAGGGACGCCCCCCTAGCCGGCCGTGCCACCGTGGCTCTGATTGATCGCTCACCCGCCCTGCGAGACGCCCTGCTGAAGTTCCTGGCCAGGCCCGAGACGTTTTCCCTGGGCCTGGGGGAGCTAGG-GGTGCAGGTCCTTGCCGGCCTCGGGGCTGTGGG--GT-CCACGGACCCAACGCCCGAGCCGGGGGTAGAAATTAATGTC-----------CAGAGATCACCCTTGATTCTGACAACAAATGCCTCGGGATTGTTTGAATCACGCTGGCTAAACTTCAGCGTGCCACACGACACCAAATCGGTCATGCTGCGTGGCATCCGGGGCTGCGTCCTGCCCTGCTGGATTCAGGGCTCACATCTGGGACTGGAATTCACTAATCCCGCTAT-GCCTTATGTTTTACAGAACTCTCACCAAAT----CGCCTGC-CACTTCCATAGTCATCGCACTGACCCCTGGCGCCACGCTGAGCATTATCCACGAAATCCCTCGGAGCGGAGCAACATCTCGGGGCTCTGCTCACCCGACGGCCGCCACCTGGCACTCCTGTGTGACCCGTCACTTTGCACAGACTTTTGGCAATGGGAGTACATTCCCTCCGCCTTTGCCCCCTACACGGGGTGCTCTCCATGGACTCTTATGTTTCAAGCAGCGCACCTCTGGTCGCTCAAGCG
s NC_004367.genome 11272 3796 - 149696 CTGAGTGGCTTTTAATGGTCGCCCTTCTCGGTGACCAGAGTGATCCTAGGCCCGTGCGACAACAGAGAGCTCGGGAATTGGCTCAAGTGGGAATTCTATTAGGAAACAGCGTTGAAAGTGAGGTTTTCACTACGGATAGCTCTATAATTGCGCCTGACACGGGTAACACTTTTTCCTGCACATATGGTCCTGACTGGCTTTCGAGGCCTACGACATGGTCTTCTGAACTTCAGCACATATTAGAAATTCTGGGTTTGGGTAAGGTTTTGCGAGTTGAACTCTGTCGACGGATTATTATCCCGGTAGGACAAAGAC-GGCCAAATCTCAATCATATTTCTGCCCTAAACCGAGTAGTGCTGTTTGACCGGCTTTTCAATAGATATGATGCATCTTTTCCCGG----------GCCGGCAATCAGAACGAACACGCTATTGCCAACAAATTCGCCGCAGCAAAGATCATCAA----AGGTCAGCCTTAT----------------GGTGTTTGGGGACATTAGAAATGACGGTGTGGGTTCCATGGCGGACGAGGTAAAATTGGTGTCAC----GCGATGACAATTATGCCGGCCCTACCATTCTTTATCCCACCTTGGATGCTGATGTCTGGAGATATTTTCTGAGGGA------ATCCTCTTACTCTTCTGATTCTGCTGCGGTAAAGGAAATGGGGTTTATGCACGTAGCCGGCTGTATTGAGACTCTTTGCCCGCAACTAATGGTTAAGCGTCAGCATATCTCGGCA--TTTCCTTTTGTGGAGCCGCGGGCAATTTGCTTGGGTTGGTATGATGTCAAGTCTCCTCCGGGACAGCA----ATCTCTTGGAAAGTGCAGTGAACGCGAGCGTATACTGACCGTCCA------AGTGGCGACCCGGAGTTTCTCCGGCCTCGGAACGCCAACGGTTGCCGGGTTTTACCGAGCCATGGATGCTGATGTTGTAAATGGATCTGGACTGCAGAATACTATGTTCTCCTGTCAGCTCGGATGTGTGTCAGGACAGGCTATGGAGTCTAGTCGTTACGGCTACGGACAATATGTGGTGATGCTTGGTAATTTTTCACCATCATTCACCGCGTTGGATCCGCCTGGCATGTTCGCAGATAGCGGTTGGGAGCAAAACTGTACACAGACGGCTTTAAATGTTTTTAAATCTCTGTACCCAGGACCGTGCATTTCTGGAAGCCGATGTCCAGCGCATCCAGCATCTGTGCTGGAAACA-----CTGTCTACTCTGATTGAAAAGGGTGGCCTCCTGATTTTCTTGTCCAGTCTTCCACCTAGCATAACCCAGCCTTTACTAAGG----------------GGAGATGCCTATGACGGAGAGAATTCGCTCATGTCTGACTACTACAAGCAATGTTTCCTATTCGCCTCGTGCACAAATCTGTTCCTGATCATTAATGAGGCATC-------GAAAGTTGGTGGTTTTACGCCTCTAAAGGCCCTTCGGCGTGCATGTCTATTGGCAGACTGCCCTCTCCACATTCTTGGTTCTACCGTTCCACTTGAGGGTATCAACTTTGTCGCTGATGTGGATAACCCAGTTCCTACTGAAGATTTTACAGATGATCACGCTCCTGTGTTTACCGT----CCCCCTCCTGTTACCGAATAAAAAGGCCATCAGACGACATCCTGGAGTAGCTACAGTAACCAAGGCAT--ACAATTCCCCCGATGGTGATGACATAGAATGGTCTATGCTTTGTCTAAATTCATGCCTGACTCAGGTTCTCTCTCATCCTACTGTTGGAAGCAAGGAACACATAGTTAGACACATGGATAGATGTTCAAACGGTTTAATTGCTTTGCAACCAGGTGTCGGACCACTTGACATACCTGTGGCTGATTACGGTTTCGTGGTCTCCAGC--AGCATATATGATGAAAAGCAG------TCCGATGTTTTACCGTACACAGCGTGGGATAATGCGGCGCGAATGAGACG----TGAACTCG----AGCCTGGGACTGCCCTTCCAACTGTGAAAGGGACGGTCATGGTATTGGGTGAACAGGGGTATAAAAGTATGCTTAGTCTGGATGCGGGAATTAAGCTGTCTATTGTGGAGTCAGTGACTAATGCTGCATTTGCTCC---CGTAAAACGAATTGAGGACCTCCTATTGACACTCTATCTACACTTGGACGAAATTGAAACAGATAAAAATGACCTTGGGAGACTACTAGCGCAAACCAGAGCCTATTGTAGGGAACTCGGCGTACGTCTGACCATAGGATCGGCTTCAAGTCCCCGAGATGCCCGGGAGATGGAATTCGCGTCGCAAGAGGCAACAAAATTTAGAACCGTGGTGTGTTCTGCGACAGCCCCTGCCCAATTTAGTGGCTATTTGTTGACGCCGGCCCTGCGAGGGGGCGGCACGGTCTTAATTCATGTAAGTGTGGAAGACGGCCCAACAATTGCCGGATCAATATTGGAACAGATTTTTGCTGGGAAGCCAAAGATTCCGACTATACCGCGGGTCTTACGCGTGAGGGAGCTTTTTCTGGCCATCAAAGAGTTAATGGCACTCGGCATGGTTGAATCCGGCCATGATGTCAGCGACGGCGGTGTATTGGTATGCGCAATTGAGATGGCCTTAGCGGGAAACAGGGGAATCAAAATATCGGTACCTGAGGATCAGGATATCATGGAGGAAATGTTTTCTGAGGCCCCAGGGGTGATCTTTGAGGTACACAGGGCCCACGCTGAGCGCGCCCTGA---AGGAACTGCAAGGCAGGCA-GCTTAGAGCAT-----------TCCAGATAGGTGCTGTAGGGGAAGAGGGACTCGACAAATTGATTGAAATTTACCACGGCCAGAAATTGCTTTTCCGGCAGTCAATCTCCTTAACTAGAGGTACCTGGTCTAGTTTTTCTATTGAGCAATACAACTTTCTTCGTCCTGAATCAGTCAATACCTCTATGTACGCCATGGACTACGG---TAACCCAGT--------TATTACCCTTAAACATCCCGAGGAAGAATTCTATACGCAACCACTTAACTTAGTCACCCACCCAGATCCTCGCTGCCGAGTAGCAGTGTTGTGCTGCCCGGGGACAAGCGGCAGCGACCCACTTATGGCCGCATTTACAAATGTAGGCTGCCCGTGTGTTCGCGTGCTGTTTCGGGAAGTGAAGTCTGAAGCATTCTTTGACCAATTTTCCGGCTTGGTAATAGGTGGCGCTTGCGGGGCTCAGGACGCACTCACGGTTTCCAGGGGCATCGTCATGACAATTACCAAAAAAAGCAAGCTACGCGATGCCCTGCTAAGATTTTTTCAAAGGAAAAATACATTTTCTCTGGCTGTAGGGGAAATAGGCTGTGCAA-TTTTCACCGGCTTGGGTATCGTCGGTAGTATCACCGACTATCCACAC---CCGGGC----ACACCAATATCACTCGAATCGGCAGAAGTTAC-------TTTGGCCCAAAACGTGTCAACCATGTATGAATCACGATGGCTCAGCTTTAGCATCCCGCCAACAACCAACGCCGTAATGTTACGTCGCCTGCGCGGTCTCATCTTGCCTTGCTGGATTCAGGGAACTTATTTGGGATT-CAACTTTCTAACTCCTGCATCTCCCTATATTTTGCAGGA-----ACGAGGTCTTACGGCGGCACATTTCCACGGATCGGGATCTCATCCATGGAACACTGCGCAGCATTATCCACGAAACCCGGCTGAAGCCAATAATGTAGCCGCGCTTTGCTCCGCGGATGGTAGACACCTGGCTATGTTATTTAACCCAAGCCTTTGTACACAGCTGTGGCACTGGCCACATATTCCCTTCCAAACAAGATCCCACTTGCTAGGCTCTCCGTGGCTTCTCGCATTTCAGGAAGCACACATTTGGGCTGTTAGTCA

a score=51978.0
s NC_007605.genome 5673 2358 + 171823 CGGTCGCCCCTCCGAGTGACCAGTCACCTTCCAGACTATGCATA-CACTGAATTTAGCCTGATATTGTCCCCCTAGCCCCGGGCCCAGCCCTCCTCAGAAAACTCTGCATGGAGAAGCTGGACGTGAACCTCCCCCCCAGACCTGTGTGCTGTATTTACAAACACTACAATAAACCCAATGTGCAAATGTGGTTTGTATGGCTACTTTGTGTTCCTAAAAAATGCAACAATAGAAGTGGAAACCCTCAGTCACGGGACATTAACCTCAACCACAAAATGGG----GGTTGGAGAAAGTAACCACATATACTGGAGATGATTCATGGGCTGGGGGTTCCCGGACAATACACCCATCTGGAGTTCAACCTAATTACATGGTAGATAAATTAAGAGTCCCTCCTCACCACTCGAAACTATGGCAGACATTCTATAAGATAACGAGGAGAGATGAGGTGAGGGCAGAGGACATTGGGCAGGTGTGGGCCACGGGGCAGCTGGCCATATCCCCCGCACTACAGAAGTGTAAGCAAAGTGAAGGG-------CTCGGAAGGCAGGCGGGGCCTAGCAATGTCACA-------GCTAAATGC----------CCACCAGG---------------GCACACACTCAAGCGGGGTCTCGGAGCTCCTAGGTCAGACCACGAAAGGTCAG--CCTGCAAGGTGGATGGC--------GTGTTTTCTGAGGTTATCCCCGCTACGTGCAGTGCTGGGTGATAGAGACCCTAGAATGTGTCGAAATGACCAAGCGTCCCCGCAGCGGGGCTCCCAACACGGGTTCCCAGAGAGGGT---AAAAGAGGGGGCCATAAAGC-CCAGGGTGTAAAACACCGACCGCGCCACCAGATGGCACACGTGGGGGAAATGAGGGTTAGCATAGGCAACCCCCGCCTACACACCAACTATAGCAAACCCCGCCCCGTCACGGTGACGTAGTCTG--TCTTGAGGAGATGTAGACTTGTAGACACTGCAAAACCTCAGGACCTACGCTGCCCTAGAGGTTTTGCTAGGGAGGAGACGTGTGTGGCTGTAGCCACCCGTCCCGGGTACAAGTCCCGGGTGGTGAGGACGGTGTCTGTGGTT-------GTCTTCCCAGACTCTGCTTTCTGCCGTCTTCGGTCAAGTACCAGCTGGTGGTCCGCATGTTTTGATCCAAACTTTTGTTTTAGGATTTATGCATCCATTATC-CCGCAGTTCCACCTAAACGGGGCTTAACGTTGCATCCCAGAAGATGCACGCTTAACCCCGCCTACAA-----CCGTGACGTAGC-------TGTTTACCAGCATGTATAGAGTTACGGTTCGCTACATCAAACAGGACAGCCGTTGCCCTAGTGGTTTCGGACACACCGCCAACGCTCAGTGCGG-----TGCTACCGACCCGAGGTCAAGTCCCGGG-GGAGGAGAAGAGAGGCTTCCCGCCTA-GAGCATTTGCAAGTCAGGATTCTCTAATCCCTCTGGGAGAAGGGTATTCGGCT--TGTCCGCTATTTTTTTGTGGCTAGTTTTGCACCCACAACAT-------------GTAAGGGCCC----------------------------GCTACCCCTACAACAC---------------------------AAAACAAACTAT----CTCCCCTAA--CCATCCTTTTGCCAATCAATT----------CTGTGACAGGGTTTC----------CTGGACACCCAGT-----CTTAGTTCAGGTAGACACCCAGTTATGCAGTGCCACCAATTCCAACCATTTTTAAAC----------------------CTCCTGGAATTCTATCATTAAACGGCATGCAGGAAAAGGACAAGCAGCGAAAATTCACGCCCCCTTGGGAGGTGGCGGCATATGCAAAGGATAGCACTCCCACTCTACTACTGGGTATCATATGCTGACTGTATA-TGCATGAGGATAGCATATGCTACCCGGATACAGATTAGGATAGCATATACTACCCAGATATAGATTAGGATAGCATATGCTACCCAGATATAGATTAGGATAGCCTATGCTACCCAGATATAAATTAGGATAGCATATACTACCCAGATATAGATTAGGATAGCATATGCTACCCAGATATAGATTAGGATAGCCTATGCTACCCAGATATAGATTAGGATAGCATATGCTACCCAGATATAGATTAGGATAGCATATGCTATCCAGAT--ATTTGGGTAGTATATGCTACCCAGATATAAATTAGGATAGCATATACTACCCTAATCTCTATTAGGATAGCATATGCTACCCGGATACAGATTAGGATAGCATATACTACCCAGATATAGATTAGGATAGCATATGCTACCCAGATATAGATTAGGATAGCCTATGCTACCCAGATATAAATTAGGATAGCATATACTACCCAGATATAGATTAGGATAGCATATGCTACCCAGATATAGATTAGGATAGCCTATGCTACCCAGATATAGATTAGGATAGCATATGCTATCCAGATATTTGGGTAGTATATGCTACCCA
s NC_006146.genome 5761 2308 + 171096 CAGCCACCCCTCTTCATAACCAGTCGCTTCAGTGACCCAAAACAGCGCAGACCATAGTCTGGG---------------CCAGTCCCAGCTCTTAACTTAAACTTCTGAGTTGAGAGGGGGGTTCACGAAATTAGCACAGAACACGTGTGCTGTATTTACAAACACTACAATAAAC----TGTATAGATATGGTTTGTGTGA----TTTGTGTTCCTAGAAACCCCAAT-----GAGTGGAAA-CCTCAGACACGCGACATTAACTTTAACCACAAGAGGGGTAGTAGTTGGAGAAAGTAACCAAATCTCCGGGAAGTCTCCAATTGCCTTCGGTTTCCTATG-ATTATACAAATCTAGAGTTACACCTCATTAC-------ACAAATCTCACG-CCCTCAAAACCCACAGAAACCCAAGCGGTCATTCTATAAGATAACGAGCGAAAATAAGGTGAGGCCTGCGGACATTGGGC---CCTGGATTAGAGGATAGGACTCGTTCGCCCCGG----GTAGGGGTCTGAGAAAAGCGAAAGGGAAATGCGCAGGCAAGTAGGTAACGGTTCGGGAAATCACAGCACGGGGCTGAATTCACGGTTCCTGACGCCAGGTGGGCAATATGTGATGAATCCCCCAAAATCACTTCTAGGGGAAGCGAAGTCTTACAA-------TCAGCACCGGGGCGGTGGAAAGCCACGGGAAGGAGTTTCT---GTTATCATCA-------------TAAATGGTAGAGACCCTAGGTTG----------------------CGCGGCGGGGTTTCTCACACAAGTCCCCCACAGGGATCCAGAAATAGGTGGACATAAAAAGCTAGGGAGTAGAACACCGTTCATACCACCAGATGGCGGGCGTGAGGAGAAAGGAGAT----ATTGTC-----------------------------ACCCCGCCCAGTCTCAGTGACGTAATTCGGACCTCAGGGATATTATGACACTGAGCTAGTG--AACACCCGGGACCTACGCTGCCCTAGCGGTTATGCTGGGGAGGAGATGAGTGTGACTTAAATCACCCGTCCCGGGTACAAGTCCCGGGTGGTGAAGACGGGGTCTGGTGCTGCTAAAAGTTTGGACAGTCCCCGGTTTCTGCTCTCTTCGGTTCAA-ACCAGCTGGTGGTCCGCCTGTTTTGTTGC-TGCTTTTGCTTTCAGTTTTGAAACCCTGTTATTATAGCGCTTGCACCT------GGTTC---------TCCCGG--------TGCTATTTTTGGCCAACAAGGCCGCCGTGACGTAGCATAACCTTGAGTTCTTTGATGTTCAAAA-------CCAGTGAAGCAGTTAGGACATTGGCTAGCCTAGAGGTTACGGACAGAGGG---GGGTGGTGTGCGGGTTCATCCGTCCGTGCCGAGTACAAGTCCCGGGAAGGGGAGAAGAGCGGC-TCCCGCCTATGTGCAATTG-AAGTCAGGATTCTCCACCCTCCCTGGCAACG------CCAGCCAATGTCCGCTCTTT-----TGTCTGTCCTTCTGCTCCCAACATCCATACTACACCCGCCAGGACCCCACAAGGTCCATCCCATATTATAACAAAGTCCCCTGTCCAACACTGCTACGTCAAGGGGTACCCGCTAGTGAAAACAGGCCAGAGAACTCTTGGAATTCCATACGCTTGACCTCCAATGTCCCTAAGCACCGCCACAAGACCCCTCAAAGACCACCAAACAACCAGCACCGGCTTAGTTCCAGTCGG----TAGTCATGCGGTGGCAC-----CCACCCATGTCTAAGTGGAGGGCTAGCAACAACAGACGTAGCTGCAATTCTATTATTCAACG----GCAGAAGAAGGGCAGCCTGCGAAACTTCACGCCCCCCGAGAAGGT------------------TAAGACCCCCAATATAGTA--GGATAGCATATGCTATCAAAAGGTTACACTAGGATAGCATATACTACCCTA--ACATATCAGGATAACATATGCTACCCA-----AAGCTAGGATAGTATACACTACCC--ACCTAAATTGGGATAGCATATGCTACCCAA--CTAAATTAGGATAGCATATGCTACCCAA--CTAAATTAGGATAGCATATGCTACCGA-----AAGCTAGGATAGTATACACTACCCAA--CTAAATTAGGAAAGCATATGCTACCGA-----AAGCTAGGATAGTATACACTACCCAACTAAATTAGGGTAGCATATGCTACCGA-----AAGCTAGGATAGTATACACTACCC--AACTAAATTAGGATAGCATATGCTACCC----ACAG-CTATGATAGTATACACTACCCAA--CTAAATTAGGATAGCATATGCTACGCA-----AAGCTAGGATAGCATATGCTACCCAGATCT--ATTAGGATAGTATATGCTACCCG-----CTATTAAGATAGCATATGCTATCCCAAC----TTTAGGACAGCATATACTACCCAGCTGT--ACTAGGATAGCATATGCTACCCCAATATTAAGATAGTATATGCTATCCA

a score=104194.0
s NC_007605.genome 8031 4022 + 171823 [encoded data, 4441 characters]
s NC_006146.genome 8175 4311 + 171096 [encoded data, 4441 characters]

a score=7050.0
s NC_007605.genome 12053 155 + 171823 CCCCGG---CCTCAGCAACC--------CTGCTGCTCCCCTCCTGCCA--CCCCAGCCTCCCCCCCTCCCCGTCCCCCTTCGCTCCTGTTCCTCCCCCGGTCCCCAGTAGGGCCGCCTGCCCCCCTGCACCCAGTACCTGCCCCTCTTGGCCACGCACCCCGGGCCAG
s NC_006146.genome 12486 160 + 171096 CCTCGGGCCCCTCTGGACTC--------CGGCTTCCCCATCCCAGCCGCTCCCCGGCCTCCTCTCCTCCCTGCCTTCCCTCCCTCTCTGTCCTCCCCGCCTCTCCCACGAGCCCATGTGTCCCCACAAGCCCAGAACCCGGCCCTCGAGGCCTCACAGCCCAGGCCAG
s NC_004367.genome 21135 155 - 149696 CCTCGGGCTCGCCTGGGACTTACAGCCGCGATGGCCCCAGTCTAACCG-------GTCTTCTCTCTCCCCTGCCCTATACCCATTCCCCACCTTCCCGCCGCTAAGACCAGGTCTCGTGATCCAAGGCGCCCGGGAGAAGGTACTGGAGG------AGCCCAGGTAAG

a score=88369.0
s NC_007605.genome 12208 1383 + 171823 GCCACCTTAGACCCGGCCAAGCCCCATCCCTGAAGACCCAGCGGCCATTCTCTCTGGTAACGAGCAGAGAAGAAGTAGAGGCCCGCGGCCATTGGGCCCAGATTGAGAGACCAGTCCAGGGGCCCGAGGTTGGAGCCAGCGGGCACC-CGAGGTCCCAGCACCCGGT-CCCTCCGGGGGGCAGAGACAGG--CAGGGCCCCCCGGCAGCTGGCCCCGAGGAGGCGCCCGGAGTGGGGCCGGTCGGCTGGGCTGGCCGAG-CCCGGGTCTGGGAGGTCTGGGGTGGCGAGCCTGCTGTCTCAGGAGGGGCCTGGCTCCGCCGGGTGGCCCTGGGGTAAGTCTGGGAGGCAGAGGGTCGGCCTAGGCCCGGGGAAGTGGAGGGGGATCGCCCGGGTCTCTGTTGGCAGAGTCCGGGCGATCCTCTGAGACCCTCCGGGCCC--GGACGGTCGCCCTCAGCCCCCCAGACAGACCCCAGGGTCTCCAGGCAGGGTCCGGCATCTTCAGGGGCAGCAGGCTCACCACCACAGGCCCCCCAGACCCGGGTCTCGGCCAGCCGAGCC-GACCGGCCCCGCGCCTGGCGCCTCCTCGGGGCCAGCCGCCGGGGTTGGTTCTGCCCCTCTCTCTGTCCTTCA-GAGGAACCAGGGACCTCGGGCACCCCAGAGCCCCTCGGGCCCGCCTCCAGGCGCCCTCCTGGTCTCCGCTCCCCTCTGAGCCCCGTTAAACCCAAAGAATGTCTGAGGGGAGCCACCCTCGGGGCCCAGGCCCCAGAGTCCAGAGGTC--AGGGGCACCTCAGGGTGCCTCCCCGGGTCCCAGGCCAGCCGGAGGGACCCCGGCAGCCCGGGCGGCCCCAGAGGCC-GGTTCCTCGCCCCTTCCCCGGGCTTCAGAGCCCAGGATGTCCCCCAGAAGGGACCCTAGGCGTCCCCTCTCCTCCCCTCCAGGCCCGAGCCTCTCCCTCGCGGAGAGGGGCCTCTTTGGGCCCTCAAGTCCAGCCCCACCGAGACCCGAGTGGCCCGGATCCCCCCACCGGCCCTTCTCTCTGTCCCCCTGCTCCTCTCCAACCTTCGCTCCA-CCCTAGACCCCAGCTTCTGGCCTCCCCGGGTCCACCAGGCCAGCCGGAGGGACCCCGGCAGCCCGGGCGAGTCGCCTTCCCTCTCCCCTGGCCTCTCCTTCCCGCCTCCC-ACCCGAGCCCCCTCAGCTTGCCTCCCCACCGGGTCCATCAGGCCGGCCGGAGGGACCCCGGCGGCCCGGTGT--CAGTCCCCCCTGCAGCCGCCCAGTCTCTGCCTCCAGGCAAGGGCGCCAGCTTTTCTC------CCCCCAGCCTGAGGCCCAGTCTCCTGTG--CACTGTCTGTA----------AAGTCCAGCCTCCCACGCCCGTCCACGGCTCCCGGGCCCAGC
s NC_006146.genome 12646 1400 + 171096 GCCACCTTAGACCCGGCCAGGCCCCATAACTAAAGACCCAGTGGCCATTCTCTCTGGTAACGAGCAGAGAGGAAGTAGAGGCCCGCGGCCATTGGGGCCAGCAAGCGAGACCAGCCCAGAGGCCCGAGGTTGGAGCCGGCGGGCGCCACCAGGTCCCAACACCCGGTCCCCTCTAGTGGACAGAGACAGGGTTAGAGCCCTCCGGCGGCCGGACCCGAGGAGGCGCCTGGGGCGAGGCTGGGTGGCTGGGCAGGCCGGGTCTCGGGTCTGGG-GGTCTGTGGTGGTGAGCCTGGTGCCTCTGGA-GGCCCTGGCCCCGCCCGGTGGCCTTGGGGTAGCTCTGGGAGTCAGAGAGTCGGCCTAGGCCCGGGG-AGTGGAGGGGGATCGCCCGGGTCTCTGCTGGCAGAGTCTGAGCGATCCTCCGAGA--CTCCGGGCCCCAAGGCGGCCGCCCTCAGTCCCCCAGACAGACCCCAGGGTCGCCAGGCGGGGTCCGGCCTCTCCTGGGGCAGCAGGCTCAACACCCCGGACCTCCCAGGCCCAAGACCCGGCCTGCCCGGCCTGCCCGGCCTCGCTCCGGGCGCCTCCTCGGGTTCAGCCGCT--GGCTGGCTCTGCCCCTCTCTCTGTCCTCCAGGGGGAACCAGGGGACC--GGCGCCCCAGAGCCCCTCGGGTCCGCCTCCAGGCGTCCTCCTGGTCTCCGCTCCCCTCTGAGCCCCGTTGAACCCAAAGAATGTCAGAGGGGAGCCGCCCTCGGGGCCCAGGGCCCCTAGTCCAGAGGACGGAGGAGCACCTCAGGGTGCCTCCCCGGGTCCCAGGCCAGCCGGAGGGACCCCGGCAGCCCGGGTGGCCCCAGAGGCCAAAGTCCTCACCCCTCTCCAGGGCTTCAGAGCCCAGAACGT-CCCGAGAAGGGACCCGAGCAGCCCCGTCCCCGCCCGCCC-GGCCAGAGACTCTCCCTCGCGGACAGGGGCCTCCCAGGGCCCTCCAGTCCAGACCCAGAGACGCCCAGGAGGCCCTGGT--CCCCAGCAGCCTCTCCCC---TCCCTCCTCCCCTCTTCCCCCTCCACCCCAGTCCCCCCCCCCCGCTTTCGGCCT-CTCGGGTCCACCAGGCCGGCCGGAGGGACCCCGGCAGCCCGGGAGAGCCGCCTTACCTCTCCCCTGGCCTGTCCTCCCCGCCTCCCTCCCCGGCCCCCCTCAGCTTGTCTCCCCACCGGGTCCATCAGGCCGGCCGGAGGGACCCCGGCGGCCCGGTGTGCCAGCGTCCCCCGCAGCCGCCCAGTCTCTGCCTCCAGGCAAGGGCGCCCGCCTCCCCCTCCTCTCTCCCTCCCCGAGGCCCCGGCTCCTGAGCTCACTGTCCCAAGTCCAGCCCCAGAACCAGCCTCCCAGGCCCGTCCACTCGCCCCGAGTCCAGC

a score=44740.0
s NC_007605.genome 13591 643 + 171823 CTCGTCCACCCCTCCCCACGGTGGACAGGCCCTCTGTCCACCCGGGCCA---------TCCCCGCCCCCCTGTGTCCACCCCAGTCCCGTCCAGGGGGGACTTTATGTGAC--CCTTGGGCCTGG-CTCCCCATAGACTCCCATGTAAGCCTGCCTCGAGTAGGTGCCTCCAGAGCCCCTTTTGCCCCCCTGGCGGCCCAGCCCGACCCCCGGGCGC--------CCCCAAA----CTTTGTCCAGATGTCCAGGGGTCCCCGAGGGTGAGGCCCAGCCCCCTCCCGCCCCTGTCCACTGCCCCGGTCCCCCCAGAAGCCCCCAAAAGT-------AGAGGCTCAGG-CCATGCGCGCCCTGTCACCAGGCCTGCCAAAGAGCCAGATCTAAGGCCGGGAGAGGCAGCCCCAAAGC--------------GGGTGCAGTAACAGGTAATCTCTGGTAGTGATTTGGACCCGAAATCTGACACTTTAGAGCTCTGGAGGACT----------TTAAAACTC---TAAAAATCAAAACTTTAGAGGCGA-ATGGGCGCCATTTTGTCCCCACGCGCGCATAATGGCGGACCTAGGCCTAAAACCCCCAGGAAGCGGGTCTATGGTTGGCTGCGC-TGCTGCTATCTTTAGAGGGGAAAAGAGGAAT---------------AAGCCCCCAGAC-AGGGGAG-----------TGGGCTTG-TTTGTGACTTCAC
s NC_006146.genome 14046 637 + 171096 CCCGTCCACCCTGTCCCCCGCAGGCCAGGCCCTCCGTCCTCCCTGGCCAC--------TCCCCACCCCTCCCCGGCCACCCCAGGCCCGTCCAGGGGGGACTTTAGGTGAC--CCTCGGGCCTGG-CTTACCATAGACTCCCATGTAAGCCTGCCTCGAGTAGGTGCCCTCTGAGCCCCCTTTG-CCCCCTGGCAGGCCAGCCCGACCCCCAGCCGC--------CCCCAAA----CCTCGCCCACACGTCCAGGGGTCCTCGAGGAAGAGGCCCAGTCCACTCAGCCCCGTGTCCACTGCCCAGTTCCCCCCAGGAGCCCCTAAAAGT-------AGGGACTCAGG-CCATGCGCGCCCAGTTGGCGGGCCTGTCAGACAGCCCTGTCTAGGGCCGGGAGAGGCAGCCCCGAGGC--------------GGGCACAGGAGCAGGCAGTCTCTGGTAGTGATTTGGACCCCAAATCTGACACTTTAGAGTTCTGGAGGACT----------TTAAAACTT---GAAAAATCTAAACTTTTGAGGCGATCTGGGCGCCATTTTGTCTCCGCGTGCGCATAATGGCGGCCCTGGA---------CCCAGGAAACGGGTCTATGGTTGGCTGCGC-CACGTCTATCTTTAGAGGGGAAAAGAGGAAT---------------CAGTCCCTAAAAGAGGGAAG-----------GGGGCTTGATTTTTAAATTTGG
s NC_004367.genome 23154 664 - 149696 CTAGTATCCCACTTTCCACCCTGTGTAGGCACCAAGTCTGCCTCAGCTCCAAGGGGTATCAGTGTCCCCCTAAGACC-CACCAGGACCACCC--TGGAGCCCCCAAGTCTCCACCTTGGGCCTAGTCTCCCCATAGACTCCCATAGAAGCCTGGCTAGAGTAGCAGTCTTCCTAGCC--------CCTCCAGGGGTCCCAGTAAGACATACAGGCGCGTGCCTCACCACAAAGTTTCCTTATGGACTCCCTCACTAAACACCACCAACAGGGACCAGGGGTCCCACTCCTTT----------CTGGTACCCC---AAGCGCCCAAAAGTTTTAGACAGTTCCTCGGGTCCCCAAGTGTCATTTTACCGGGGCTG------GGTCCCACACCAGTCCCAGGGAGGGTGTCAGGAGGCCGGCTACTGGGTTAGGGCACGGT---AGGGTGTCTCTGTGAGCCCTTCTGA----------GGCACTTTGTAG---TGAAAAATTGAGTTTAGTGTCCAAATTTACATAAAAATTC-AATGCTGAAGGCTAAAGGGCCGCCATTTTGTATCTGAGC-CGCCATGTTGCGAGC--------------TGCTGAAAG-----TCACAGTTGGCCTCACTCGTGGCTATCTTTAGCGTGGGAAACAGGAATTGGGCCTGTGCTGGGAGGGCCCCAGAACTGGGAGGACCACATCCGCTGGGCTCA-CCTAAGACGTCAC

a score=57245.0
s NC_007605.genome 14234 874 + 171823 CAAAGGTCAGGGCCCAAGGGGGTTCGCGTTGCTAGGCCACCTTCTCAGTCCAGCGCGTTTACGTAAGCCAGACAGCAGCCAATTGTCAGTTCTAGGGAGGGGGACCACTG-CCCCTGGTATAAAGTGGTCCTGCAGCTATTTCTGGTCGCATCAGAGCGCCAGGAGTCCACACAAATGTAAGA-GGGGGTCTTCTACCTCTCCCTAGCCCTCCGCCCCCTCCAAGGACTCGGGCCCAGTTTCTAACTTT-TCCCCTTCCCTCCC-------TCGTCTTGCCCTGCGCCCGGGGCCACCTTCATCACCGTCGCTGACTCCGCCATCCAAGCCTAGGGGAGACCGAAGTGAAGGCCCTGGACCAACCCGGCCCGGGCCCCCCGGTATCGGGCCAGAGGTAAGTGGACTTTAATTTTTTCTGCTAAGCCCAACACTCCACCACACCCAGGCACACACTACACACACCCACCCGTCTCAGGGTCCCCTCGGACAGCTCCTAAGAAGGCACCGGTCGCCCAGTCCTACCAGAGGGGGC---CAAGAACCCAGACGAGTCCGTAGAAGGGTCCTCGTCCAGCAAGAAGAGGAGGTGGTAAGCGGTTCACCTTCAGGGGTAAGTAACCTGACCTCTCCAGGGCTCACATAAAGGGAGGCTTAGTATACATGCTTCTTGCTTTTCACAGGAACCTGGGGGCTAGTCTGGGTGGGATTAGGCTGCCTCAAGTTGCATCAGCCAGGGCTTCATGCCCTCCTCAGTTCCCTAGTCCCCGGGCTTCAGGCCCCCTCCGTCCCCGTCCTCCAGAGACCCGGGCTTCAGGCCCTGCCTCTCCTGTTACCCTTTTAGAACCACAGCCTGGACACATGTGCCAGACGCCTTGGCCTCTAAGGC
s NC_006146.genome 14683 885 + 171096 TAAATGTCAGGGCCCAGGGGGGTTCGCGTTGCCAGGCCACCTTCTCAGTCCAGTGCGTTTACGTAAGCCGGACAGCAGCCAATTGCCAGTTCTAGGGAGGGGGACCACTGCCCCCTGGTATAAAGTGGCCCAGCAACTATTTCTGGCAGCATCAGAGCGCCAGAAGCCCACAGAGATGTAAGACAGGGGTCTTCTACCTCACTCTAGCCCTCCAGGCCCTCCGAGGCCCCAGGCCTAACTTCTAACTCTGTCCCCTTCCTTCCCTCGCCCATCGCCTTGCCCTGCGCCCGGGGCCACCTCCACCGTCATCGCCGGCTCCGCCATCCAAGCCTAGGGGAGACCCAAGCGAAGCCACCGGACCTTCCAGGCCCGGGCCCCCAGGTCTCGGGCCAGAGGTAAGTGGACTTTCATTTATTCCGCTCAGCCCACCACTCCACCACACCCAGGCACACACTACACACAGCCACCCATCTCAGGGCCCCTTCGGAGACCTCCTGAGAAGGCGCAGGCACAACAGCCCAACCGGCGGAGACCCACAAGGACCCACACGCGTCCGCAGGAGGGTCTTCCTTGAAGAAGAGGACGGGCCGGTAAGCGGTCCACCAGTAAGGGTAGGTAACTTCAC--CTCCAGGGCCCACATCATGGGAGGGCTAGTACACACGCTTCTTGCTCTTCACAGGAACCTGGGGTCTAGTCTGGGTGGGATCAGGCTAACCCAAGTCGCCTCAACCCGGGCTTCAGGCCCGCCTCAGTCCCCTCGCCCCTGGGCCTCAGGCCCTCCGCGTCCCCGTCCTCCAGAGTCACGGGCTACAGGCCCTGCCTCTCCCTCTACAGTCCCAGAGTCCCGGTCTGGACACATGAGCCAGGCGCCGGGGCCTTTCAGGC

a score=9208.0
s NC_007605.genome 15108 172 + 171823 CCTCGGGTCCCCCTGGACCC--CGGCCTCAGCAACCCTGCTGCTCCCCTCCTGCCACCCCAGCCTCCCCCCCTCCCCGTCCCCCTTCGCTCCTGATCCTCCCCCGGTCCCCAGTAGGGCCGCCTGCCCCCCTGCACCCAGTACCTGCCCCTCTTGGCCACGCACCCCGGGCCAG
s NC_006146.genome 15568 160 + 171096 CCTCGGGCCCCTCTGGACTC--CGGCTTCCCCATCCCAGCCGCT------------CCCCGGCCTCCTCTCCTCCCTGCCTTCCCTCCCTCTCTGTCCTCCCCGCCTCTCCCACGAGCCCATGTGTCCCCACAAGCCCAGAACCCGGCCCTCGAGGCCTCACAGCCCAGGCCAG
s NC_004367.genome 26959 155 - 149696 CCTCGGGCTCGCCTGGGACTTACAGCCGCGATGGCCCCAGT-CT------------AACCGGTCTTCTCTCTCCCCTGCCCTATACCCATTCCCCACCTTCCCGCCGCTAAGACCAGGTCTCGTGATCCAAGGCGCCCGGGAGAAGGTACTGGAGG------AGCCCAGGTAAG

a score=864887.0
s NC_007605.genome 15280 13728 + 171823 [encoded data, 13967 characters]
s NC_006146.genome 15728 13781 + 171096 [encoded data, 13967 characters]

a score=15372.0
s NC_007605.genome 29008 110 + 171823 CCCCTGTGTCCACCCCAGTCCCGTCCAGGGGGGACTTTATGTGAC--CCTTGGGCCTGG-CTCCCCATAGACTCCCATGTAAGCCTGCCTCGAGTAGGTGCCTCCAGAGCCCC
s NC_006146.genome 29509 110 + 171096 CCTCCCCGGCCACCCCAGGCCCGTCCAGGGGGGACTTTAGGTGAC--CCTCGGGCCTGG-CTTACCATAGACTCCCATGTAAGCCTGCCTCGAGTAGGTGCCCTCTGAGCCCC
s NC_004367.genome 20307 111 - 149696 CCCCCTAAGACCCACCAGGACCACCC--TGGAGCCCCCAAGTCTCCACCTTGGGCCTAGTCTCCCCATAGACTCCCATAGAAGCCTGGCTAGAGTAGCAGTCTTCCTAGCCCC

a score=8466.0
s NC_007605.genome 29118 131 + 171823 TTTTGCCCCCCTGGCGGCCCAGCCCGACCCCCGGGCGCCCCCAAACTTTGTCCAGATGTCCAGGGGTCCCCGAGGGTGAGGCCCAGCCCCCTCCCGCCCCTGTCCACTGCCCCGGTCCCCCCAGAAGCCCC
s NC_006146.genome 29619 130 + 171096 CTTTG-CCCCCTGGCAGGCCAGCCCGACCCCCAGCCGCCCCCAAACCTCGCCCACACGTCCAGGGGTCCTCGAGGAAGAGGCCCAGTCCACTCAGCCCCGTGTCCACTGCCCAGTTCCCCCCAGGAGCCCC

a score=0.0
s NC_007605.genome 29249 6131 + 171823 [encoded data, 6131 characters]

a score=38730.0
s NC_007605.genome 35380 1002 + 171823 -GATATTTTTGGGAATGGTGTTAACTTTCTCCCCTTGTATTTGCTATTCAATCAACCTGATTCCCCCTGCTCATACCTCCACTTACAACCAAGCCACTACGGCCACGTCCCCGGCCTCCCGCTCGGGTAAGTGCTTTTTCATTTT-TAGCCCCAGCCCCTCCTCTATAAGTTCTAGGCAAACCTCCAATCACCAGCCACCTTCCAATGTAGTCTCTTAGAGAGTGGCTGCTACGCATTAG----AGACCACTTTGAGCCACCCACAGTA-------ACCACCCAGCGCCAATCTGTCTACATAGAAGAAGAAGAGGATGAAGACTAAGTCACAGGCTTAG-CCAGGTGATTTGTGAATTTCAGTTTATTTACTTTCTTCCAATCAAGCTTTCCCAGCCTCCGCTTGTTAGGTCCTAGTTATGGGTTTT-------CCATGGGG-GACTTAGTATCCGTTCTATTAGATTAACGTGCAA-GACGCTAAACTTAACCAAGGTCAGCCAAGGGACGCGTGTTATC-CCAGGCTGCCC----ACCCTGAGGATTTCCCCCCAAAA-------------TCCTCCTACCCTCTCTTTATGCCATGTGTGTTGTTGGCTTGTGTTAGTGCTATGTAATGCGTTGCCGCCAGGTGGCAGCCTGT---TTATAGATGTGCAGTACCCCTTAATGTTAGGTCTGCTTTAGGGCTGCCAGGTGGCGCAATCTAGGATTAATTCACCTGTATCCCTTTCCCTCCACCCGCAGTAACCCAGCACTGGCGTGTGACGTGGTGTAAAGTTTTGCCTGAACCTGTGGTTGGGCAGGTACATGCCAACAACCTTCTAAGCACCCGCGCTTGTGTTTTGCTTTATCTGCCGCCATCATGCCTACATTCTATCTTGCGTTACA---TGGGGGACAAACATATCATCTAATTGTTGACACGGATAGTCTTGGAAACCCGTCACTCTCAGTAATTCCCTCGAATCCCTACCAGGAACAACTGTCAGACACTCCATTAATTCCACTAACAATCTTTGTTGGGGAAAACAC
s NC_006146.genome 29749 1026 + 171096 TGGTATTTCT-AAAACTTTCTTACCTTTCTCCCCTTGC-TTTGTTATCTAATGAACCTGAT--CCCCCGCTCACACCTCCATTCACAACCAAGCCACAAGGGCCACTTATCCAGCCAGGAGCAAGGGTAAGTGTTTTTCCATTTTGTAGCCCTAGCCCCACCTCT-TAAGTGCTAGTCATACCTCCAATCACCAGCCACCTTCCAATGTAGTCTTGGAGCGAGTGGCTGGCACGCTCTAGGCAAAGAACA--------AACCCACAACAAGTAACCACCACCTGCCGTCGAAGGGTCTACAT---AGAAGAGGAGGAAGAGATCTAAGTCACAGGCCCAGCCCAGGTGATTTGTGACTTCCAATTTATTGGCCTCATTTCAGTACAGCTTTCCCAGTCTTAGCATGTCAGATTCTGGTAATCAGCCTTATGTGTACCAAGGGGCAACCTAGTAGCCATTCTATCAAATTAACGAGCAAGGGGGCTAAAATTAAGCAAGGACAGCCAGAGGGCCGCTGCGCCCGCCGGGCTGGCCGGATACCCCGGAAATTGGCCGCAAAAAGGGCTGTAGAGGGTCACCCTTCCCTATCTGCAGCCCTTTTCTGCAGTT-TCCCCTTCCAGGGCTATTCCTAGTGTTGCCACGCGGTGGCAGCCTATGACGAATTGGGGTGCCGTCCCTCCCAGGGCTAGGTTTGCTGTAGGGCCGCCAGGTGGCGCAAACTGAGATTAATGACCCTGTATTCCTTTCCCTCCACCCGCAGTAACTCAGTGCTGGCGTGTGACATGCTGTAAAGTTTTGCCTGAACCTGTGTTGGGGCAGGTAGATACCAACAGCCTTTTAAGCACCCTCGCTTGTCTTTTGCTCTTTCTGCCGCCACCATGCCTACTTACTACGTTGCGGTTCAATCCGGGGGGC-AGTATATC--CTACATGTTGCCACTGATGAAAGAGGGCAACCGGTACTTTCCCTAACGTCAACGCTGTCCACCCAGG---CCCTGTCCGATCGACCCTTAATTCAACTCAAAATTATCGTGGGTGACGAAAA

a score=9451.0
s NC_007605.genome 36382 139 + 171823 GGGGGTGCCCCCACCACTCCCACCACCCCCCCCACCACCACCCCCACCACCCCCACCACCCCCACCACCCCCACCACCCCCACCACCTCCACCA---------CCTTCACCACCACCCCCGCCCCCACCACCCCCACCACCTCAGCGC
s NC_006146.genome 30775 127 + 171096 TGAGGGCCCGCAAACTGTACCCGGGGCACCCCCGCCACCACCTCCGCCACCC---CCTCTTCCACCACCTCCGCCACCC------CCTCTTCCA---------CCCCCTCCACCACCCCCTGTTCAACCTCCTCCACCA---GAACGC
s NC_004367.genome 69821 146 + 149696 GGGGGAGTCGTCACCCGGTGAACCCCTACCGCCTCTACCACCCCTACCGCCCCTGCCACCCCTACCGCCTCTGCCACCCCTACCGCCCCTGCCACGGCTAGCGCCTCTCCCACGGCTACCGCCTCTTCCACCCCTGCCTCCTCTGC--

a score=4367.0
s NC_007605.genome 36521 23 + 171823 AGGGATGCCTGGACACAAGAGCC
s NC_006146.genome 30902 23 + 171096 AGGGACGTGGGAACACAAGAACC
s NC_004367.genome 30564 23 - 149696 AAGGATGTAGGAACACAAGAACC

a score=3951.0
s NC_007605.genome 36544 444 + 171823 ATCACCTCTTGATAGGGATCCGCTAGGATATGACGTCGGGCATGGACCTCTAGCATCTGCTATGCGAATGCTTTGGATGGCTAATTATATTGTAAGACAATCACGGGGTGACCGGGGCCTTATTTTGCCACAAGGCCCACAAACAGCCCCTCAGGCCAGGTTGGTCCAGCCACATGTCCCCCCTCTACGCCCGACAGCACCCACCATTTTGTCACC----TCTGTCACAACCGAGGCTTACCC-CTCCACAACCACTCATGATGCCACCAAGGCCTACCCCTCCTACCCCTCTGCCACCTGCAAC-ACTAACGGTGCCACCAAGGCCTACCCGTCCTACCACTCTGCCACCCACACCACTACTCACGGTACTACAAAGGCCTACCGAACTTCAACCCACACCATCACCA------CCACGCATGCATCTCCCTGTCTTGCATGTGCCAGACCAATC
s NC_006146.genome 30925 402 + 171096 TGACCCCCGCGATAGGAACCCACTTGG---TGGCCCAGGGGGGAGCGCCGTTTCGTGGGCGGTTCGCATGCTCTGTATGTCCAATTTGATTGTACGCCAAGCACACGGTGTACGTGGCCTTCTAGCGACCCTAGGTCCACAGAGACGTAATC-----------------CCACACCTCCCCC-------CATGGCGTCACCCATCACGTTGTCACCAGGTTCTG--AGAAC---GTGTCACCCACTCCACCCCCAT---CAACACCACCGAGGGCCGCTCCTTCT----------TACCTACAACTACCCCAGGAACCCCAGACACTTA---ATCCTGGTA----ACCACACAGCCCACC-CTCA-GACACCATGGATGCCTCCCCCTTCTCACCACACACAGTCTCCGTGGGCTCCATGCAGGCCTCCTCCTCCTCAACACATGCCTCCCCCATC

a score=19857.0
s NC_007605.genome 36988 964 + 171823 AATGCACCC-----TCTTACTCATCAAAGCACCCCAAATGATCCAGATAGTCC----AGAACCACGGTCCCCGACTGTATTTTATAACATTCCACCTATGCCATTACCCCCCTCACA------ATTGCCACCACCAGCAGCACCAGCACAGCCACCTCCAGGGGTCATCAACGACCAACAATTACATCATCTACCCTCGGGGCCACCATGGTGGCCACCCATCTGCGACCCCCCGCAAC-CCTCTAAGACTCAA---GGCCAGAGCCGGGGAC-----AGAGCAGGGGGAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAAGGGCAAGTCCAGG----GACAAGCAAC-------------GCAAGCCCGGTGGACCTTGGAGACCAGAGCCAAACACCTCCAGTCCTAGCATGCCTGAACTAAGTCCAGT------CCTCGGTCTTCATCAGGGACAAGGGGCTGGGGACTCACCAACTCCTGGCCCATCCAATGCCGCCCCCGTTTGTAGAAATTCACACACGGC-------AACCCCTAA-----------CGTTTCACCAATACATGAACCGGAGTCCCATAATAGCCCAGAGGCTCCCATTCTCTTCCCCGATGATTGGTATCCTCCATCTATAGACCCCGCAGACT---------TAGACGAAAGTTGGGATTACATTTTTGAGACAACAGAATCTCCTAGCTCAGATGAAGATT---ATGTGGAGGGACCCAGTAAAAGACCTCGCCCCTCCATCCAGTAAAAACCCTTGCCCTCTCCAGCAACCAATGTATCCCAAATAAATGTTACTTCTTTTGCTCTTAACCATTGACACGCCTGTCATTCTATCAATTAAACAAGGGAAA-AAGGTTTAGCTATTCCACCAACACGACCCCAAGGAAGGCTTGCCAAAATTGGTGCCTTGCTCTCAGCACTTTGCCAGCAACTTATAGCATGGTAGGCAGCTCAACTCGGCCCGTCTTACTGCCCAGCCTACTCTCCACTCCCAGTCCATGTTCGCACTCCTATGCATTTC
s NC_006146.genome 31682 995 + 171096 CATGCACCTGAGGGTTCTCCTCTCCAACAAGCCCCACAG----CAGCTCACCCCTAGAAACCTACCACCACTCAGTTCACCTCTTAAAGTTCCAACTGTGCAATTGCCTCCCCTATGTACAACACTGCCCCCACCTGCGCCATCGG---AGCCAGCTCCGGGAATAGTCCGCACTGAGTTACAGCCCCCCGCGCCACCAGGGCCCGTATGGTGGCCGCCAGTT----ACCCGTTCCAAGGCCTCTAAACGCCGAAAGGGAAAAAGCCGGGCTCCCTCTAGAGC--GCAAAAGGGCAAGGGCAAAGGTAAGGGCAAGGCCAAAGCCAGGGCCAGGTTAGGCCAAGAGTCTACCCCACCACAGGCAGGTCCAGT--ACCGTC---ACCTCAGCC---TACTCCCAGTCCGAGTATGCCTGCACTAAGTCCAGCAATTCCCCTCGCCTCTAACCCTGTCCGGGCGCCCAATAGCTCACCAACCCCGGGCCCATCCGAAGCTCTCCCAGCACGTAGCAGGTTAGCCAGGGCCGTGGCAGGCCGCTCAGCTCAGCCACCCGAGTCCCCAGTACAGGAACCGCAGCCCTCTGATACTCCACCAACTCCCATGCTCTTCCCAGAAGACTGGTATCCTCCCACCATAGAACCCCCAGACCTTGAAGACATTGATGAAAACTGGGATGACATTTTTAATGTATCAGATTCTGAGCATTCTGATGAAAACCAAAATGCAGGAGGTCCCAGTAAGAGACCTCGCCCCTCCAACCAGTAAAAG-ATTCAATCTGTTCGGTTACCCATGTATCCAAAATAAATTTACCTCCTTTCTCTGTTAACAGTTAACCCGTCTGTCATTCTATTAGTTAAACGGGAAAAGCAAGAATTAGCTCCTCCTC---CACATCTCACTGAGAGCCCCGCCAAAATTGGCAAC---------------TACTCGCAGCTTGCA----GGTGGGCTGCATATTCCCGCCAG-CTTGCAGTTCACGCGCCTCT-CACCCACAAAACATCATCTCAC-CCCATGCACGTG

a score=5716.0
s NC_007605.genome 37952 271 + 171823 CTGCCCTCCCACTTT---TACCCCAGTCCCAACCCAAAACCACACACAACACATAGAATTGTTAGTTTAAACAGTTTATTG---------ATAGGTGGCTGCTTTTAGCCTAATTGTGTATTGCTCTCGTTGCCAAAACCTGTTGTAAGGGCCGGCACCCGCAACATGGGGAAAA----CATAACCGCCGCCATCCCATGGGGAGGGTAGAGGCGGTTGACATGTAGGTGAGTAGTGTAAGAAGCATGGCGAAGTAGACAGGTTACTTTTAGAGTGTAGTGTACAGG
s NC_006146.genome 32853 243 + 171096 CTTCCCTCCCAGTCTGTGTCCACCAGCACCATCCCAAAGTTACACACAACACACGGGACTGTTAGTTCAGCCAGTTTATTGCTACACAGTATGGAGGGC--CTTGCACCCCAGCATTTGACGCCGCTCGTTTCCAAATCTTGTCGCCAGGGTCAGCACCTGCAACAGGGAAACAAATTTCAGTGCCGCCGCTACCCCCGGGGGATGGTTAAAGCGGGCTAGGCGTAGG-GAGT--------------------------------------GAGGGTCATGTA---G

a score=0.0
s NC_007605.genome 38223 1047 + 171823 GCCGGGCGCAACAGTGCCACCAACCCGGGGTCTGAGCATTCCATGGGCAGCAGGGACACTGCACTACCGCCAGGTCCTGGGGCAGCCGGGGTTCCTGGCGCTCCGGGGGCAGCCGGGCGGCCGCCGGTGGGTCCGCTGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCCGCTGGGCACCGCTGCGCCGCCGCCAGGTCCTGGGGCAGCCGGGGTTCCTGGCGCTCCGGGGGCAGCCGGGCGGCCGCCGGTGGGTCCGCTGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCCGCTGGGCACCGCTGCGCCGCCGCCAGGTCCTGGGGCAGCCGGGGTTCCTGGCGCTCCGGGGGCAGCCGGGCGGCCGCCGGTGGGTCCGCTGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCCGCTGGGCACCGCTGCGCCGCCGCCAGGTCCTGGGGCAGCCGGGGTTCCTGGCGCTCCGGGGGCAGCCGGGCGGCCGCCGGTGGGTCCGCTGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCCGCTGGGCACCGCTGCGCCGCCGCCAGGTCCTGGGGCAGCCGGGGTTCCTGGCGCTCCGGGGGCAGCCGGGCGGCCGCCGGTGGGTCCGCTGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCCGCTGGGCACCGCTGCGCCGCCGCCAGGTCCTGGGGCAGCCGGGGTTCCTGGCGCTCCGGGGGCAGCCGGGCGGCCGCCGGTGGGTCCGCTGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCCGCTGGGCACCGCTGCGCCGCCGCCAGGTCCTGGGGCAGCCGGGGTTCCTGGCGCTCCGGGGGCAGCCGGGCGGCCGCCGGTGGGTCCGCTGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCCGCTGGGCACCGCTGCGCCGCCGCCAGGTCCTGGGGCAGCCGGGGTTCCTGGCGCTCCGGGGGCAGCCGGGCGGCCGCCGGTGGGTCCGCTGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCC

a score=27636.0
s NC_007605.genome 39270 450 + 171823 GCTGGGCACCGCTGCGCCGCCGCCAGGTCCTGGGGCAGCCGGGGTTCCTGGCGCTCCGGGGGCAGCCGGGCGGCCGCCGGTGGGTCCGCTGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCCGCTGGGCACCGCTGCGCCGCCGCCAGGTCCTGGGGCAGCCGGGGTTCCTGGCGCTCCGGGGGCAGCCGGGCGGCCGCCGGTGGGTCCGCTGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCCGCTGGGCACCGCTGCGCCGCCGCCAGGTCCTGGGGCAGCCGGGGTTCCTGGCGCTCCGGGGGCAGCCGGGCGGCCGCCGGTGGGTCCGCTGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCCGCTGGGCACCGCTGCGCCGCCGCCAGGTCCTGGGGCAGCCGGGGTTCCTGGCGCTCCGGGGGCAGCCGGGCGGCC
s NC_006146.genome 33096 427 + 171096 GCCGGGCACAGCAGTATCTTGGCTCGGCCCTGCGGC-------------------TCTGGGGCAGCCGGGTGGCCGCCGGCGGGTTCGCCGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCGGCTGGGCACCGCCGCGCCGCCGCTCGGTCCTGGGCCTCCGGGTGCTCCTGGTGCTCCGGGG-CAGCCGGGTGGCCGCCGGCGGGTCCGCCGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCGGCTGGGCACCGCTGCGCCGCCGCTCGGTCCTGGGGC--TCCGGGGTCCGGGTGCTCCGGGG-CAGCCGGGTGGCCGCCGGTGGGTCCGCCGGGCCGCTGCCCCGCTCCGGGTGGGGGGTGGCCCGCCTGGGCACCGCTGCGCCGCCGCTCGGTCCTGGGGCTCCGGGTGCACCTGAAAGGCAATGGGGGTCGGGAAGGGA

a score=10179.0
s NC_007605.genome 39720 675 + 171823 GCCGGTGGGTCCGCTGGGCCGCTGCCCCGCT-------CCGGG-------------TGGG------GGGTGGCC----CCGCTGGG---CACCGCTGC--------------GCCGCCGC-----CAGG--TCCTG--------GGGCAGCCGGGGTTCCTGGCGCTCCACTGCACCTGGAATGCA----GGGTGGGGG---------CGTGGTCCCCTGGACCCCAG---CCCCGCCGATCCCTCC----CCCAGGGCGTACCCGGCTTGCCTG-GTTCTGGGGCTCCTCTGG---------------GGGTCGCTGCATCCGCCGGTAGGGTTCGAATGGGCGTGGTCCGCTTGCTCTGCTGGCCCGGTACGCCTGGATTGCC----GGCTGGGGGCTGG--------GG--TCCCGGGACGCCCCCTCCCTGCTCCCACCCGGTTCCC-----TCCCCCAGGGCGTGCCCCGCTTGCCTG----GTCCTGGAGCT----CATCCGGGGATGCTGCATCCGCTAGTCCGACCTGGGTGGGTGCGGTCCGCTGGCCCCACCC----------TGGGGGTAG-CCGCCGGGTCTGCTGGTCCGGTGCACCTGGAAGGCAGGG------GGGGGGGCAGTGAGGGAGGGGCGTGGTCCTGGGACCCCGCGCCGACTGGCAGGGGGTCCCCATG-GCACAGGC--CTAGGGGTCC-AGGGGGCAGCCGCGGCCCAGCGCGCCCCG--TTCACGGGGGAGGACCGCGGCCGAGCCACCAGGGGCCC-GGCGGGGGTGGGGGGTGCGCTCCCAGGCCGGACCCTGGTG
s NC_006146.genome 33523 712 + 171096 GGGGCGTGGTCCCCGGGACCCCAGCACCCTC-------CCGGCCTCC----CTCCCTAGG------TTGTGCCC-GGCTTGCCTGG---CCCTGGTGCT----CCTCCGGGGGTCGCCGCGTTCGCTGG--TCCGG-----TTTGGGTGGGCGTGGTCCGCGGG--TTCGGTGCACCTGGAAGGCAACGGGGGTGGGGGAGGGAGGGGTGTGGTCCCCGGGACCCCAGGCCCCCACCCGGCTTCCTC----CCCGGGGTGTGCCCGGCCTACCCCCGTTCTGGAGCTCCTCCGGTCCGGTGGGTGT---GGTCCGCTGGGTCCGCTGGT-----CCGGGTGGGCGTGGTCCGATGGGTCCGCGGGTTTGGTGCACCTGGAAGGCAACGGGGGTGGGGGAGGGAGGGGTGTGG--TCCCCGGAA-----CCCCAGGCCCCCACCCGGCCTCC-----TCCCC-GGGGTGTGCCCGGCCTACCCC---CGTCCTGGAGCT----CCTCCGG------------------TCCG------GTGGGTGCGGTCCGCTGGGTCCGCTGG---TCCGGGTGGGCGTGGTCCGCTGGGTCCGCTGGTCCGGTGCACCTGGAAGGCAGGG------GGGGGGTCGGGGCAGGCGGG-CGTGGTCCCGGGGCCT-ATGCCGGCCGG-----GGGTCCCGTG-GCACGGGG--CCGGGGGTCCCGGGGGGCAGCCGCGACCCAGCGCGCCCCG--TTCACGGGGGAGGATCGCGGCCGGGCCTCCCGGAGCCCCGGCGAGGGTGGGGGGTGCGCCCCCAG-CCGGACCCTGGTG
s NC_004367.genome 32426 688 - 149696 --GGGGCGTTTTCCGGGTGCCCAGGCCTCCCGGGTTTTCCGGGTGCCCAGGCCTCCCGGGTTTTCCGGGTGCCCAGGCCTCCCGGGTTTTCCGGGTGCCCAGGCCTCCCGGGTTTTCCGGGTGCCCAGGCCTCCCGGGTTTTCCGGGTGCCCAGGCCTCCCGGGTTTTCCGGGTGCCCAGGCCTCC----------------------CGGGTTTTCCGGGTGCCCAG---GCCTCCCGGGTTTTCCGGGTGCCCAGGCCTCCCGGGTTTTCCGG-GTGCCCAGGCCTCCCGGGTTTTCCGGGTGCCCAGGCCTCCCGGGTTTTCCGGG------TGCCCAGGCCT--CCCGGGTTTTCCGGGTGCCCAGGCCTCCCGGGTTTTC-------CGGGTGCCCA--------GGCCTCCCGGGTT-----TTCCGGGTGCCCA---GGCCTCCCGGGTTTTCC----GGGTGCCCAGGCCTCCCGGGTTTTCCGGGTGCCCAGGCCTCCCGGGTT--------------TCCG---------GGTGC------CCAGGCCTCCCGGGTTTCCGGGTGCCCAGGC-CTCCCGGGTTTTCCG----GGTGC-CCAGGCCTCCCGGGTTTTCCGGGTGCCCAGGCCTCCCGGG---TTTTCCGGGTGCCC-AGGCCTCCCGG-----GTTTTCCGGGTGCCCAGGCCTCCCGGGTTTCCGGGTG----------CCCAGGCCTCCCGGGTTTTCCGG---------GTGCCCAGGCCTCCCGGCCCAT-ACCGCGGTCCAGAACCGC---------CCAGCTCCTGGAG

a score=80731.0
s NC_007605.genome 40395 870 + 171823 CCAGGCAGGGACCCCGCGC---CACCCGCTTCATGGGGGGGGAGGCCGCCGCAAGGACGCCGGGCC--GGCTGGGAGGTGTGCACCCCCCGAGCGTCT-GGACGACGCTGGCGAGCCGGGCCGGCTCGCCTTCTTTTATCCTCTT-----TTTGGGGT-----------CTCTGT--------GTAATACTTTAAGGT-TTGCTCAGGAGTG-----------GG------GGCTTCTTATT----------------------------GGTTAATTCAGGTGTGTCATTTTAG---CCCGTTGGGT--TTCATTAAGGT-----------GTGTCAC-CAGGTGGGTGGTACCTGGAGGTTATTCTATTGGGATAACGAGAGGAGGAGGGGCTAGAGGTCCGC----GAGATTTGGGGTAGGCGGAGCCTCAG-------GAGGGTCCCC---------------TCCATAGGGTTGAA-CCAGGAGGGGGAGGATTGGGCTCCGCCCCGATATACCTAGTGGGTGGAGCCTAGAGGTAGGT---ATCCATAGGGTTCCATTATCCTGGAGGTATCCTAAGCTCCGCCCCTATATACCAGGTGGGTGGAGCTAGGTAGGATTCAGCTAGGTTCCTACTGGGGTACCCCCCTACCCTACCTTAAGGTGCGCCACCCTTCCTCCTTCCGTTTTAATGGTAGAATAACCTATAGGTTATTAACCTAGTGGTGGAATAGGGTATTGCAGCTGGGTATATACCTATAGGTATATA---------------GAACCTAGAGGAAGGGAACCCTATAGTGTAATCCCTCCCCCCCCTACCCCCCCCTCCCTTACGGTTGCCTGAGCCCATCCCCCACCCCAGCACCCCGGGGTGACGTGGCACCCC-GCGTGCCTTACTGACTTGTCACCTTTGCACATTTGGTCAGCTGACCGATGCTCGCCACTTCCTGGGTCATGACCTGG---CCTGTGCCTTGTCCCGTGGAC-AATGTCCCT
s NC_006146.genome 34235 879 + 171096 CCAGGCAGGGACCTCGCGC---CGCCCGCTTCATGGGGGGGGAGGCCGCCGCAAGGACGCCGGGCC--GGCTGGGGGTTGTGCACCCCCCGAGCGTCT-GGACGACGCTGGCGACCCCGGCCAGCGCGCCTTCTTTTATTCACTT-----TTTGGGGG-----------CGCTGT--------GCAATACCTTAAGGT-TTGCTCAGGAGAG-----------GG------GGCTTCCTATT----------------------------GGTTAATTAAGGTGTGTCATTTTAG---CCCGTTGGGT--TACCTGCAGGT-----------GTGTCAC-CAGGTGGGTGGTACCTGGAGGTCATGCTATTGGGTTAACGTGAGAGGGAGGAGCTA-AGGTCCGC----GAGATTTGGGGTAGGCGGAGCTTCAG-------GAGGGTCCCC---------------TCCATAGGGTTAAA-CCAGGAGGGGGAGGTT----CTGCGCCCCGTTATACCTAGTGGGTGGAGCCTGGAGGTAGGT---ATCCATAGGGTTTCATTATCCTGGAGGTATCCTAAGCTCCGCCCCTATATACCAGGTGGGTGGAGCTAGGTAGGATTCAGCTAGGTTCCTACTGGGGTACCCCCCTATCCTACCTCGAGGTGCGCCACCCTTCCTCCCTTCGTTATAATGGTAGCATAACCTATAGGTTATTAACCTAGTGGAGGAATAGGGTACTACAGCTGGGTATATACCTATGGGTATATACCTATAGGTATATAGAAACCTAGAGGAAGGGAACCCTATAGTGTAATCCCTCCCCCCCCTACCCCCCC-TCCCTTACGGTTGCCTGAGCCCATCCCCCACCCCAGCACCCCGGGGTGACGTGGCACCCCTGCGTGCTTTTCGGGTGCATCACCTTTGCACATTTGGTCAGCTGACCGATGCTCGCCACGCCC-GGGTCATGACCTGT---CACTCGCCTTGTCCCGTGGAC-TCTGTCCCC
s NC_004367.genome 33122 896 - 149696 CCAGGCCAGGACCCCGCGCTTGTTCCCGGTTCATTCGGGGGGGGGCCGCGACCTGGA-ACCTGACCAGGGCCGAGCGGTCTA-GCCGCCTGGGCGTCCAGAACGCCGCTG--AACCCGGGCAGGCGCG-CTCCTTATATTCAGTTCTGTCCTTGGGTGTGTCCCATTCTCTCTATTCCTATTGGTTAAACCTTAAGGTCTCACTCAGCTGAGTTATTCCTTCTGGTTTCTCGTGTTCCTATTGGTTCCTACCTATAGGTCCCACCCTACAGGTTAATCCTCCTGGTTCAATCTGGGCTCCTATTGGTTAATACCTGTAGGTTGTGACCCACAGGGTTACTCAGGTGGGTAAT-CCTGGAGGTAATTGCATTAGGTGAACGGGAGGAGGGAG------GGGTTTGCAGCTGAAATTGAGAATGGGCGGAGCTAGGGACCTGCTGAAGCTCCGCCCTCTGGGTTGTAGTCCCATTGGGTTTAATTCAGTGGGGGGGGGGTTTGGGGTTCCCCCGATATACCTA------------------TAGGTTCCACCCACCGGGT---------------------TAAACCCCGCC----------------------------------CATTTTAATTCCAGCGGGATACCCCCCCTATTCCACTGCCGTTTATCCTATAGAATTTCCGCTGGGTTCCACAGGAGGGTACCCTTCGGTAGGTACCCCTACCGGTAGGTATTGGTACTACAGGCGGGTATATAT-----AATATATA--------TATAGGAGAACCTATAGGA--TTAACCTAGAAGAGATACCTAACCCCCCCCTAACCCCCCCCTTCCCAAATGTAGGTCACCCCATCCCCCACTC-------------TCCATTGGCCCCATTGCGTGCCTTTCACCTCTGTCATCATTACACATTCAG--GGCACACTCATTCCTCCGGCATTC-GGGGGTCAACCGGGGGACACGT-CCCCGTCTCGCGGACAACTGTCCCC

a score=50124.0
s NC_007605.genome 41265 1061 + 171823 CCAGCGTGGTGGCTGCCTTTGGGATGCATCACTTTGAGCCACTAAGCCCCCGTTGCTCGCCTTGCCTGCCTCACCATGACACACTAAGCCCCTGCTAATCCATGAGCCCCGCCTTTAGGAAGCACCACGTCCCGGGGACGGAAGGGGACTTGGGGTGATTTTCTATGTGGGGGTGGAAATATGAGCAAGAATAAGGACGGCTCCTTATTAACCTGATCAGCCCCGGAGTTGCCTGTTTCATCACTAACCCCGGGCCTGAAGAGGTTGACAAGAAGGGTCAAGGTTTCGTCTGTGTGTTGAAGGGCAGGGGCTGTTGGGTGCATCTGGAACGGCTTACCTCGGGTAACTGTTTGCCATTAAAAGGTTGGGGATTAGGTTTAGCCCCTTTAGCTGCCATTTCGAACCGGGGTGTGCAGATGCAGGTCTCCGG---GTGGGCAGGCAGTACGAGAT-GTCACGTTGTGTTGTCTTTC-CTCCCACCCCTGTCCTGGCTGT--GGCAAATGCGACCCTCAT-AGAGTTGTGTTTC-AGGTCTGTGTCCTGTTTTGCGGTGGGTTATTTCTTCCCTCAGTGTTTGCCAGCTTATTTCCCCAGTTTTCACGTACTGGGGCCTGTGGACACCTGAGGGAGCGGCCGTTGGTGGGTATGTGTTGGAATTGCTCCCACCCTCAATTTTCGCTTGCCTTCTTCCCTTGTTAACCTGATAGCATAGCCTCTAGGTTTCCTTGTAGGTCTGTTTGGGTTTGTTGGTTCACGTGGTGCTAACTTGAATTTTTTGGTTTTCTAGTTCCCTCTTAATTACATTTGTGCCAGATCTTGTAGAGCAAGATGGCCTATTCAACAAGGGAGATACTGTTAGCCCTGTGTATACGGGACAGTCGTGTGCATGGAAATGGTACCCTGCATCCTGTGTTGGAGCTAGCAGCAAGAGAAACACCTCTCCGCCTTTCGCCAGAGGACACTGTAGTTCTGCGTTATCATGTGTTGCTTGAGGAGATAATTGAACGAAATTCAGAGACATTTACAGAAACTTGGAACAGATTTATAACACACACCGAACATGTGGA
s NC_006146.genome 35114 1026 + 171096 CTGTTAGGGTGGCTGCCTTTGGCATGAATCACTTTGAGCCACTAAGCCCCCGTTGCTCGCCCCGCCTGCCTCACCGTGGCACACTAATCCCCTGCTAATCCATGTGCCCCGCCTTTAGGAAACACCGCGTCCCAGGGAGGGAAGAGGGCTCTGGGAGATATCCTAGGTTTGGACGGAAATATGAGTCAGAGCACGGCCGGCTCCTTATTAACCTGATCAGCCCCGGGGTTGCCTGTCTTAGCACTAACTCCGGGCCTGAAGAGGTTGACAAGAAGGGTCGAAGTCTCGCCGGTGTGTTTGGAGG-----GCTGTTTGGTGCAACTGAAGCTGCTCTCGGTTGGTAACCGCTTGACATTAAAGGGTTGGGGATTAATTTTAGCCCCTTAAGCTGCTATCTGAAAACGGGGTGTGCATACACCAGCCACCAGCCTGGGGTTCGGCCGCGCGTGTTAGTTGCTTGTTGATGCCTTTTGCCATCTTCCCCCTCCTAGAAATTAGGCGCCCGTGCCTCCCCTCAGAGCCATTCCCCTGGGTCTGTG-----------GGCAGCTGCCTTAGCCCCCCA----------------CTCCCCA------ACCTATTGGGGTAGGTA-ATTCTTGTGTG-GTGACTTT----GGGAGCGTGATGTAATTGTTCCCACCCTCAATTTTCGCTGGCCTTCTTCCCTCGTTAATTTGATAGCATGGCTGTTGGGTCTTACTGTGGGTCTGTTTGTGCAGGTGGCTTCATGTGGTGCTAACTTTCATCTTTTGGTTTTCTAGTTCTCGCCTAATTACACTTGTGCCAGATTTTGTAGATAAAGATGGCCTTTTCAACAAGAGATTTACTGTTAGCCCTGTGTATGCGGGACAGTCACGTTCATGGAAACGAGGGTCTGCATCCTGTGTTGGAGTTAGCATCAAGAGAATCACCCTCCAGCCTCTCTGCGGGGGACACTCTGGTTCTACGTGTCCATGTACTGCTTGAGCAAATAATTGAACAAAATGCGGGTGCCTTTTTAGAAGCCTTGGACAGATTTTTATCAAACACCGAAGAGTGGGA

a score=19917.0
s NC_007605.genome 42326 211 + 171823 TCTGGATTTTAACTCAGTATTTTTAGAGATATTTCACCGTGGAGACCCAAGCCTTGGGCGCGCGTTGGCCTGGATGGCCTGGTGC----ATGCATGCCTGCAGGACATTGTGTTGTAACCAGTCTACTCCTTACTATGTTGTGGACCTGTCAGTTCGTGGGATGTTAGAAGCCAGCGAAGGCCTGGATGGTTGGATTCATCAACAGGGCGGCTGG
s NC_006146.genome 36140 211 + 171096 TGTGGATTTTACCAGAGTGTTTCAAGAAATCTTCCACCGTGGAAATCCCACTCTGGGACGAGCGTTGGCCTGGCTGGCCTGGTGC----ATGCATGCCTGCAGGACGTTGTGTTGTAACAGGAATACTCCCTACTATGTTGTGGACCTGTCGGTTCGTGGGATGTTAGAAGCCAGCGAAGGCCTTGATGCTTGGATTCACCAGCAAGGCGGCTGG
s NC_004367.genome 35298 205 - 149696 TGAGAATTTTATATGGGGTGTTCAAGAAGAATTGTTTGGGGATGGCTGTAATTGGGGAAGGATTGTAGTTTGGCTAGCTTGGTGCTGTTTTATGTGCC-GCTGCACTCGGTGTTGTGAAGACTATAATCTGGTAGATGCTGT---------ATTTCGAGGTGTTTTAGAATCAACGGAGGGTATTGACGGTTGGATTCATTCTCATGGTGGCTGG

a score=3913.0
s NC_007605.genome 42537 151 + 171823 TCTACATTAATTGAAGACAACATTC--CTGGATCCAGAAGGTTTAGCTGGACTTTGTTTCTTGCTGGACTGACTTTGAGTCTGTTAGTTA-----TATGTAGTTATTTATTTATCTCCAGAGGAAGACACTAATCTATA---CATTTTCTCAGCACTTTAT
s NC_006146.genome 36351 153 + 171096 CCTTCTTTACTGAGGGGCAACCGTT--CAAACACCGGAAGCCCCATATTGACTGCATTTTTAGCTGGACTAACTTTAACTTTCGTAGTTG-----TGTGTAGCTATCTCTTTATCTCTGGAAGAAGACGCTGATTTATA-TGCCTGTATTCAGCACTTTAC
s NC_004367.genome 35516 156 - 149696 ATTTTTTGGCTTCTAGGC-ACGTTCAGCAGGAATCTGAA--CACATTTTGATTAGATTGTCAGTTTTTATGATGCTAACTACAGCCGTTGCTGTCTGTGCTG-TGTTTGGATATCTTTGCAAGTTGGC-CTAGTTTATACTTTTTGTTTTTAGAATGTTAC

a score=17140.0
s NC_007605.genome 42688 882 + 171823 ATGAATCAGGGTCATTGGGCCTGCGGGGAACTGAGCCAGTAGGATAT-----TAGGCAAGGGTGACACAGTGCCCATGCATTATAATTTAACCAAACAGTGGTCGTGAGTTTTAGGCCGGCCATGGGGGCTTACAAGAATAACATGCCAATGACCCGG-CCCCCACTTTTAAATTCTGTTGCAGCAGATAGCTGATACCCAATGTTATCTTTTGCGGCAGAAATTGAAAGTGCTGGCCATATCTACAATTGGGTGTCCTAGGTGGGATATACGCCTGTGGTGTTCTAACGGGAAGTGTGTAAGCACACACGTAATT-TGCAAGCGGTGCTTCACGCTCTTCGTTAAAATAACACAAGGACAAGATACTAAAGAAATAACTGAGGTGAGTGT-----------GGGAAGATGGGAATACTAT----GTGTTATGTTAACGGGTGAGA-----GCCTA-------TACTGCA---------GCCCAGACTCG----------------------GGGGGAGGAG--------GAAATGGTAAGAGTTATACTCTACTTATCTTTTTTGACACTACATTTAACTGTTATGTAACA---ATGTTTGCT--TATTTTCATGTTCAATAAACGCTATGTTAATGATGAAGAACCTGTGTTCTTTGGAAGTGGGCCCAATGGGGTAGTAGGTTTTGGGAGGGTGCCGTGCTAGATATTTCAACTGCCACAGACCCCATTTTGTCCCACCTGTTACCACATTCTAGGTCCTGCATCCAGTGGGCCAGGTGTCTCACCATGGCTCTTTCTAGGTGGATACCACAGTCCAGGCCCCCAAGGCTACCGTGCTAATTACCTCCTCATGTCCACCCCCACCCTGTGTTACTGTCGCCTGATTATCCTGGCTTAGCAGCCTCCAAGTTTTACAAGACGTCCCATTGCCCTGCCCTTGGTCCAAGTCTCGCCGGT---
s NC_006146.genome 36504 910 + 171096 ATAAGCTTGGGTCATTGGGCCTGTTGAAAAGTAAACCGGCAGGATAGATGAGTGGGTGAGGGTGCTACAGTGCCCACACCTTGTAACTGAACAATACAGTGGGTTTAGTCTTAAAGCCAACCACGGGGGCCTG-AAGCTTTAGAAACCAATGACCCGGGCCCCCACTTTTAAATTCTGCCACAGAAGATAGCTGATACTCGATGTTATCTTTTGCGGGGGAATTTCCAAGTGTTGGCCATACACACCAGGGG----CCTATTACTGAGACATGCCCGTGGTGTTCTGATGGACAGCGGGGAAGTGCACTTGTGCTTATGTAATCGGTGCTTCGCCCTCTCCATCATAATAACACGAGGATGAGAGGCTAAGGA--TAACTAAGGTGAGTGTAAGCTGTGGTTGGGAAGACGTGTATGTTTTTCCAGTGTGCCATTAAGGGGTGGGGTTGAGGCCTGCCTTGGTTAATGCATGGTGTTTTACATGCACTCTAAGGTGTGGGGTTTAGATGATTGGGGGCGGCGTATCTTTTGATTTGGTAAAAGTTAGCCCCTCCCCATCATCTT-GACACCACATTTACCTATCATCTTCCAGTTATGCTTGGTGTTACTGTTTTGTTCAATAAACACAGATTTTATAATACAATTGTTGTGTTTTCTGCATGGGG-----ATGGTG-GGTAGCTGCCTCGAGTGTGCCGTGCCGGTCACTGCTGCAGTTATGAGTCC----TTGCTTTGAATGTGGCCC-------GGGTGGGCAATGGCTGGCCCACGTGAAT-------GCTCTTTCT----------CATATCCCAA------AAAGCTCCCCGGCCATGCACCACATCAAAGCCCAGCCAAGTCCCCATT--TATGACTTAGCAAGTGGGGCTTTGCAGGACCCAAATTTTGCAAGCTCACCCCT---CCAGTCCACTGATAATCTCACACTGGTATG

a score=184455.0
s NC_007605.genome 43570 1821 + 171823 -TTTCAGCAGCCTGTTGTAGCCTGCCCCCAAGTTTCGCAGGTTTCCCCCATGCTTCCACCCGTTAACCCAATAGCATGACAG------------------CCAATCCA------------------ACACGAGGCAAGTTTTAAG--AGTTAAAAGC-----AACTACTGTTTATTTTCCAAAATGAGCTGGGTATAGTTGATGATCTGTAGGCGCAGCTCATCCCCACATTCCAGGTCCTTGATGGCCTCGTAGATGGCATCTTCGTCGACATTGACAGCCTTCTCATATACCGTGTCTCTGGGGCTGACCTTTATACAGAAGGCGTCCCCTACTAGGTCCACGGCCAGCTCGTAGGTGGGGCCTATGTTTTCACATAACAGTTTCAAGCAGGTCTCTGGGATGTGAAGGGAGGTGCCCTGGAGCAGGAGATGCATGATTAGGCGCCCTTTTCCATTTGTGCTGAAGATG------GGGCAGATGGTGCCACAAAAGTGTCCGGTGACCAGGTAAGCGTAGAGAAGGCTGGGTTGGGAAAGTCCAGCCTTTACTGCACTGGGAGAGCTGCTGAGCAGAGACACATAGAAGGTCTTGTTGGGTATTATCTTGTGGACATTGTTGAAGAAGGAGAGCTGGGTGGAGCTAAACTCCTGAGGCACATGAACCTGGGACCTATTGATGCAGATCTCGCAGTGAGACCCCAGAGTCAGGCTGTGGCCGAAGGGAGACAGGCGAAGGCAGCGCCCGGGGGAGAGAGTGCACAGTGACAGTGGGAGAAACACGGCCTCTGAGACATGTATGGGGGTGTTCATCTCACGCAGAAAATCTTTGCCCAGCTCAAAGTTGGCAGAGATTCCCCTGAAGAAGTCCCGTAGTGAAAAATGGGATCTGTCTACACCATGTCTGGTGTGCCGGGAACATATTGATCGGGCCACACTGCCAACCCTTTCCATTCTTCCCAGCTCTGAGCGAGATTTTCCACACCTGGACACCGACTTCACGCTATGCGCCGAGG-CCTTTGAGGCCGTGTAGTTTCTG--TGGTGCGGATGCATTAGGCGGCGCAATGCGGGATCTGCCGGTCGCTGTTGGCGTGCATTCACGGCATCT--GGGGTGACCGGGGCCATC-------------GGGTTTACTTTTCACACGTAGACCTGGGAAGTTTGATAGGACTGTACCAGGTCAAGGCCGTGGATGCGCAGGACCACGTCCAGTTCCTTAGTGACATCCACGAGGATTGTTTTGCCCACTCTGGCCACTTGTGTGGATTTAAATATGTACACAAGCGTAATTAACGAGTCACAGACCCCCTGTTCCAGATTCTGACCGGCTGCAAGCGCTGCCTTAAAGGCCTGGAAGCTGGGTG---------GGTAAATCTGACCAAACAGCACGCTCGGATTCGTGATGCTGTGGTTGATGGCACACAGGGGGTCGCAGAACAGGTGCTTGTGGAAGTCTTGCGGGGTGCACATCTGCAGCCAGGCCCTTAGCCTGGGGCATGGCACATCCAGCAGCGTGTTTTGGGTCTTGATGAGGAACACGATCCTGTCTAGGATTTTGATGTTGTTGCCGAACGAGTCAAGAATCAGGCTCTTGAAGCGGTCAAGGGTGTCCTTGGCGTCCGGGTGGGCCCCGAGGCTCTCGCAGAGTGGGCAGATGGTCCGTGAGGCATTCTTGTGCCTTAGTCCAAACATGGGGGCCAGGAGGCAGGGGCCCTGCGAATGGTCGCCAGCCTCCGGTCTGGTGATGGCCAGGGCCAACTCCGCCAGCTC-----ATCGCCGCTGTATTCCG------CGTTTAAACCGATAGCATGGTGGCCTGGCCCCCCGAGCAGGTCCGTCCCCTGCCACGTACCTAATAGTAGTCCACAGTAGTCGGCCTT
s NC_006146.genome 37414 1849 + 171096 ACTTAGCCAGTGGGTCTTAGCAGGCCCC-AAGCCCCGCGAAC--CCTCCCTGTTTCACCCCGTTATTCCAATAGAATGACAGATTGGCTTTCACAACCAGTCAATCCACCCCTGGCTACCCAACAAACACAGGACAGGTGTTAAG--GGTCCGAG--------ATTACTGTTTATTTTCTAAAATTAGCTGTGTGTAGTTGATGATCTGCAGTCTTAGTTCGTCCCCGCACTCTAGATCCTTAATGGCCTCGAAGATGGCGTCCTCATCGACGTTAACTGCCTTCTCGTGGACAGCGTCCCTGGGGCTGACTTTTACACAGAAGGAGTCCCCTATCAGATCCACGGCCAGTTCGTATGCGGGGCCAATGTTTTCACAGAGGAGTTTCAGGCAGGTCTCCGGGATGTGTAGGGAGGTGCCTTGGAGCAGAAGATGCATGTTCAGGCGTCCTCTCCCGGTGGTGCTGAATATG------GGGCACACAGTGCCACAGAAGTGGCCGGCGACCAGATAGGCATAGAGCAGGCCGGGCTGGGAGAGTCCTGCCTTCACGGCGCTGGGGGAGCTGCTAAGCAGGGACACATAGAAGGTCTTATTGGGGATGATCTTGTGGACGTTATTGAAGAAGGAGAGCTGGGTGGAGCTGAACTCCTGAGGCACGTGAACCTGGGATTTGTTGATGCAGACCTCACAGTGGGAGCCCAGAGTCAGGCTGTGGCCAAAGGGGGAGAGTCGAAGGCAGCGGCCCGGAGACAGTGTACAGAGAGACAGCGGTAGGAACACGGCCTCTGACACGTGGATGGGGGTGTTCATCTCACGCAGAAAATCTTTGCCCAACTCAAAGTTGGCAGAGATCCCCCTGAAGAATTCACGCAGCGTAAAACTGGACCCGTCT---CGGCGCCGTGTGTGCCTGGAACATCTGGAGCGGGCCACACTGCCGGCCCTTTCCATCTTTCCCAGCCCCAGATACGTTTTGCCGCTCCGTGCCACCGATCTCACGCTCCGACCCGAGG-CCTTCGAGGCCACGTAGTCTCTG--TGGTGCGGATGCATGGGGTGGTGGCATCTGGGATTAGCGGGCCTCTGCTGGCACACATCCCCTGCCTCC--GGGGTGACGGGTGCCATC-------------CGGGCTACTTTTCACACGTATACCTGGGATGTCTGATAAGACTGGACCAGGTTTAGGCCGTGGAGACGCAGGACCCCGTCCAGTTCCTTAGTGACATCCACGAGTATTGTTTTGCCCACTCTGGCCACTTGTGTGGATTTAAATATGTACACAAGCGTAATTAACGCGTCGCATACCCCCTGTTCTAGGTTCTGCCCGGCCGCGAGAGCTGCCTTAAAGGCCTGGAAGCTGGGTG---------GGTAAATCTGACCAAAGAGCACGCTCGGATCGGTGATGGCGTGGTTGATGGCACATAGGGGGTCGCAGAACAAGTGCTTGTGGAAGTCCTGCGGGGTGCACATCTGCAGCCAGGCCCTGAGCCTGGGGCAGCTCACGTCCAGCAGCGCGTTCTGGGTTTTGATGAGGAACACAATCCTGTCCAGGATTTTGATGTTGTTTCCAAAGGAGACCAGGATAAGGCTCTTGAAGCGGTCGAGGGTGGCCTTGGCATCCGGGTGGGCCCCCAGACTCTCGCAGAGGGGGCAGATGGTCCGTGAGCCGTTCTTGTGTCGCAACCCAAACATGGGGGCCAGCAGGCAGGGGCCCTGTGAATGGTCGCCGGCCTCCGGTCTGGGGAAGGCCAGGGCCATTTCCGCGAGCGC-----ATCCCCGCTGTATTCCG------CGTTTAAAACGATAGCATGGTGGCCGGGTCCTCCCAGCAGGTCCGTGTCTCTCCAGGTGCCCATCAGCAGGCCGCAGTAGTCGGCCTT
s NC_004367.genome 36183 1845 - 149696 ACCTACCCTGTAAACACTAGTTCAT-CCCAATTTCCGCGCCC--ATACCCTAGCCCCTGGCGTTTAACCTATAGAATTACGGTAAGGATATCAAATTAGGCC---CTA------------------ACAAATGACAAGATATAGATTAGTTAAAGCAGAACGATTTATTGACTTCTCTCTGATATGAGCTGAGTGTAGTTGATGATTTGTAATCTTAATTCATCGCTCCAGTCTAGGCCCTTGATTGCTTCATATATGGCGGATTCGTCGACACTGATAGTTTTTTCCTGCACGCCTTCTAGGGGCTCAAAATGTAGGCAGAATGTCTCTCCTATTAAATCCAGAGTTATGTTATAAGTAGGACAGATGTTGCCACTGAGGAGCTTAAGACACGTTTCAGATAGGTGAAGTGACGTTCCTGGAACCATTAAAAACATTGTTAG------TTTGCCCCGGGGGTTGAATGTAAAAACTGGGCATGCCTTCAAATCAAAATGCCCGGCCAGGATAAATGCATATAAAAGTGTTGGCTGCCTAATTCCAGCCTTAACCGCATCCGGTGAGTTACTGAGGAGGGACACATAGAATTGCTTGTGAGCAAGAACTTGGTGTACATTGTTGAAGAATGAAAGTTGAATTGAGCCAAGTTCCTGAGGGATGTCCAGTATAGCTCTCCCTGCACAAACATCACAGTGGGATCCCATGACTAGACTATGTCCGAAAGAGGAGAGTTTTAAGCACCTCCCCGGGGGTACCGATGCCAGTCTAAGAGGTACTGAAATAGATTTGGAAACACATATAGGGCGGTTTATCTCTCTTAAAAAATCCTTCCCCAATTCAAAATTTGTAGAGATGCCTGTAAAGAACCTGTCTAGTGTCAGCTGGGTGCCGAGT---C--TGTCCTGTG----------ATTTTGAT-GAGCCATTGTGTTCATTTCTTCTGTGACGGGAAACGGTGGAAACAATTGTTCTGGCCCTAATACCAGGCGCCCGAAATTTCCAAGGGTCTTTTTTGACGATTTTGTTAACGCCTCGTGTCGA---ATCGGGCCTGGCATACTGCGAATAAC-GTCCGCCATTCTTGCGTGTCAGTTGTGTGTAGGGGGCGAATTTAGGCATTGTATGTAGTGTGGGTGTTTAGACTTCAGACGTAAATCTGCGAGGTCTGGTACGTCTGTATAGTCTCTAAACCGTGACGCCTTAAAGCCGCATCCAGCTCTTTTGTGACATCTACAAGTATAGTTTTGTTTATTCTTGAAACTTGAGCTGATTTAAATATGTACGTAAGTGTAATTAGCTCATCACATACACGGTTTTCTAGGTGTTCACCATTGGCTAATGCCGCCCGAAATGCC-----GCAAGGTGTTCTCTTTTAGGAAGT----CCAAATAAAACCCCATGATCTGTTGTCTTATGATTGATGGCACACATTGGATCACAAAAGAGGTGTTTGTGAAAGTCTTGCGAGGAACATCGGGATAGCCAGGTTTTTAATCGGGGGCATGATACATCCAGAAATGTATGAGAATCTTTGAGTATAAAGGCAATTCGGTCTAGAATTTTTATGTTGTTCCCAAATGAAGCCACTATGCGTGCTTTTAGGCGGTCCAGGGCGGACTTGGCATCTGGATGTCCGGCCAGGATTTCACATAGTGGACATATTGTGCGGGATGCATTTTTCTTTTTTAGGCCAAACATAGGAGCGAGTAGGCTTGGTCCCTGTGAGGTGTCAACATTC-----CCGGGGGGTGTCCAATTCTTAAAACTTGAGAACAGGGAATTGACACTGTCTTTCATCTGCCCGTTAATGACAATGGAGTATCTGTCTGGTTTTTCCAGTAAGTCGGTTCCTTCCCATATGAAAGTTAAGAAATCACAGAAATCATGCTT

a score=8248.0
s NC_007605.genome 45391 180 + 171823 GGTTGTAATTTCAGGAGAGAGTCCTCCCTTTTCGGCCCTGAGAAATGGATGCTGAACTCGGTTTCTGGTAGGCAGGTGGCAGCACAGGGCGGTGTACAGGCCCCTGCCGACGTCCCCTGGGACATCCTGGGAATCTTTGCAGGTTCTGGGTCCAGGGAGGGTAAGAAAAGTGGGGGTGGT
s NC_006146.genome 39263 177 + 171096 GGACGCGACACCCTGGGAATTTCCTCCCTTCTCGGCCCTGAGGAACGGGTGTGGGCCCCGGACTCGAGACGGCAGGTGGCAGCAGAGGCCTGTGTACTGGGCTCGGCTGGCCTCCCCGGGAATCTCCTGCGATTCTTTGGATGTTCTGGGTCCCGGGAGGGTGAGAAA---GGGGGTGGT

a score=72292.0
s NC_007605.genome 45571 536 + 171823 TCTGGGCCACATGGACTTGAAGCAGAAGTTGGCCGGGGACTGGCCGGTGAGGATGGATTTCAGAAACTCCAATTTGTAGTAGCCGAGGTTGGCATTTCTAATCATGTCAGAAGAGGACACAGGGAGGAAGCACCGGCAAATGTAAAAGTGAAGCTGGATGTCAATGGCAAGAATCCTGGAGGGCATGAAGAGGGAATCCAACCCCCCGGCCATGGGGAAGTATTTTATCAGGATGTGTAAAAAGTCCATGCCTGTGATGAGGCTAGAGATCCAGGCTCGTGGGGCATTTAGACAGTAGTAGCAGAGCAGGGCATAGTCCTCAAAGAAGGCCACGGGGGCATCTGAGTGATTGACCAGGGTGTCGAGCAGATCACAAACTCGGCAGGTGCTGGCTGGAGAGAGGGACTCGTAGGTGTGGACGAGTGGTGGGTAGGCTATGCCTTCTTCCGCGTTGGCTGGAAGATAGGAGTGGGCCATCAAAAGGCCGACTGCCTCGAACTGGCTTTTCAGATTGTCCACGGT---CCAGGGCACAAAGT
s NC_006146.genome 39440 536 + 171096 TCTGGGCCACATGGACTTGAAGCAGAAGTTGGCCGGGGCCTGGCCCGTGAGGATGGATTTAAGGAACTCGAGTTTGTAGTAGCCCAGGTTGGCGTTGCGAATCATGTCTGAGGAGGACACGGGGAGAAAGCACCGGGAGATGTAAAAGTGGAGCTGGATGTCAATGGCCAGGATCCTGGAGGGCATGAAGAGGGACTCCAGCCCCCCCGCCATGGGGAAGTATTTCATCAGGATGTGTAAAAAGTCCACGCCCGTGATGAGGCTGGAGATCCAGGCTCTGGGGGCGTTGAGACAGTAGTAGCATAACAGGGCATAGTCCTCGAAGAAGGCAACGGGGGCCTCGGAGTGATTGACCAGGGTGTCCAGCAGATCGCAGACGCGGCAGGTGCTGGCTGGAGATAGGGACTCGTAGGTGTGGACTAGCGGGGGGTAGGCTACCCCTTCCTCCGCGTTGGCGGGGAGGTAGGAGTGGGTCTTGAGCATCCTTGCCGCCTCCGGCTGGCTTTTGAGATTGTCCACGGT---CCAGGGGACAAACT
s NC_004367.genome 38211 536 - 149696 TTTGGGCCACATGGATTTGAAGCAGAAGGTTGCAGGCCCCTGTCCCGTAAGAATGGCCCTTAAAAACTCGATTCGATAGTATCCTAGATTAGCACCATGAATCATCTGTGTAGTTGTGATTGGGAGGAAACACCTGTTCACAAAAAAGTGCAGTTGCACATCAACGGCTAACAGGCGGTGGGGCATGAATAAGGTGTCCAGACTGCCAGCCTCTGGAAAGTGAGCCATCAATAAGCGTGTAAAGTCCACTGCGGCGATGACTGTCGAGAGCCAAGCCCTTGGAGCTCTACTACAAACGTAGCATAGAAGGGCATAGTCTTCGAAGAAGGCTATGGATGGGTCCGTGTGGTTTACTAACGAGTCGAGTAGGTCACATATTCTACATGTACTTGCTGGAGACAGGGATTCATATGTGTGTGCCAGAACCTCGTTTTTGAGCCCCTCGTCCGTGGCTGTGGGGAGATACGAGTTGGCCA---GAAGTGAGGCCACACACGTCTGGCTTTCAGCTAGAGCCCCGGCTTGCCATGGAACAAACT

a score=12077.0
s NC_007605.genome 46107 239 + 171823 CCTCCATCTTTGGAGTTCTGCCCGCGATCTGTGCCACCTCTGTTACGCCACTCCTCGTGAGGGGGCAGCTGGACAGTCTTTTTCCGGTCAGGGGGTTTGGCTCGTTTGCGCTCGTGACTTTGTGAGCCATGACACATCTGGGTGGCAAGGTGAGGTCTTCTGGGTTTTTAATACCGGGGTCGGCACCAGTTTCTGGGACACCGCCACAAGGACAAGGTGGGCTAGCAAGTTCTCGAGTC
s NC_006146.genome 39976 233 + 171096 CCTCCATCTCTGGAGTTCCGCCAGCACCCCGGGTCCCTGCTATTAAGTCACTCCTAGTGAGTGGGTGGCCCGGCAGCCTTTGACCGGTCAGACGGGGCAACTCGCTCGCGCTTGTGACGCTGTGAGCCATGGCACATGTGGGCGGCGGGGTGGGGTCTCGTGGGTTTTTAATACCGGAGCCGGCGCCTGTTTCTGGGACACCGTCTGGAGGG------GGGCTGGCCATACCTGGAGTT

a score=113504.0
s NC_007605.genome 46346 817 + 171823 TACGAAGACTCCGGGG---GCAGTCTTTTGAGTTTCTCGCCTATGAT-CCACCCCAATCTCGCCCCCCTAATTGCGCCATCTGCCTACGCGAGGCTGAACCTCCTGAATCACTGCATCTTTCTTGAGGCGTTTAAAGAAGAGAATAGTGGCCAGGGCCTCGGT----GGGGTCCAGCGTGAGGTCTTATTTTTGAAA-AGGGATATTATAAAACAGGTCATTGCTCGGATTGTGGCAGCCGATAGCACCCTAGATCTAGTGAAT---CATGGCGAGCCCGGAAGAGAGGCTCCTAGACGAGCTCAATAACGTAATTGTGTCATTTCTGTGTGACTCTGGGTCTCTGGAAGTGGAGAGATGCTCCGGGGCGCATGTGTTCTCCAGGGGCAGCTCCCAACCCCTCTGCACCGTGAAGCTGCGCCACGGACAGATTTACCACCTGGAGTTTGTCTACAAGTTCCTGGCCTTTAAGCTGAAGAACTGCAACTACCCCTCCTCGCCCGTGTTTGTGATATCCAACAACGGCCTGGCCACCACCCTGAGGTGCTTTTTGCACGAGCCGTCGGGTCTCAGATCGGGCCAGAGCGGCCCTTGCCTGG---GTCTCTCAACGGATGTTGACCTACCAAAGAACTCCATCATTATGCTGGGCCAGGATGACTTCATTAAGTTCAAAAGCCCCCTGGTCTTCCCTGCTGAGCTTGATCTCCTGAAATCTATGGTGGTCTGCCGGGCCTACATCACGGAACACCGGACGACGATGCAGTTTCTGGTGTTTCAGGCCGCCAACGCCCAGAAGGCCTCGCGGGTCATGGATATGATTAGTGATATG
s NC_006146.genome 40209 816 + 171096 GACGGCGACCCGGGTG---GCAGTCTTTTGAGTTTCTCGCCTATGAT-CCGCCCAGATCTCGCGCCCCTGATTGCACCGTCCGCCTACGCGAGGCTGAACCTCCTGAATCACTGCCTCTTTCTGGAGGCGTTTAAGGAAGAGAATAGCGGTCGGGGCCTCGGT----GGGGTTCAACGAGAGGTCTTATTTTTGAAA--GGGACACTATAAAACAGGTCATTGCCCGGATTGTGGCTGCTGACAGCACCCTAGACCTAGTTAAT---CATGGTGAGCCCGGAAGAGAGGCTCCTAGACGAGCTCAATAACGTGATTGTGTCCTTTCTGTGTGACTCGGGGTCTCTGGAGGTGGAGAGATGCTCGGGGGCCCACGTGTTTTCCCGGGGGAGCTCTCAGCCCCTCTGCACAGTGAAGCTGCGCCACGGACAGATCTACCACCTGGAGTTTGTCTACAAGTTCCTGGCCTTCAAGCTGAAAAACTGCAACTACCCCTCCTCTCCGGTGTTTGTGATCTCCAACAACGGCCTGGCCACCACCCTGAGGTGCTTTCTACACGAGCCCTCGGGTCTCAGGTCCGGGCAGGCGGGCCCGTGCTTGG---GGCTGGCCACGGACGTGGACCTGCCCAAGAACTCCATCATCCTGCTGGGACAGGACGACTTCATTAAGTTTAAGAGTCCCCTGGTGTTCCCGGCCGAGCTTGACCTTTTGAAGTCCATGGTGGTCTGTAGGGCCTACATCACGGAGCACCGGACGACGATGCAGTTTTTGGTGTTTCAGGCCGCCAACGCCCAGAAGGCGTCGCGTGTCATGGACATGATTAGTGATATG
s NC_004367.genome 39013 827 - 149696 GGCGAGGACCTGAGTGTCCGTGATCTTATCAAATTTGAGTCCATGTTACCAACAAGTATTCG----CTTAATCGCGCCTACTCCATTTTCTAGGCTAAACCTTATAAATTATTGCTTGTTTTCCACTGTGTTTTCCCAGGAAAGCAACAG-CGAGGTTTTTGTACCGAATGTTCACCGTGATGTGTTATTTTTTAAAGAAGGATATTATTAAACAGATTATAGCACGGATTGTGGCTGCTGACAACGCTTTAGATCTAGCTGGTCAACATGCAGGACCGGGGGCAGAAGTTTATAGACGATCTTAATAACATCATCGTGTCCTTTTTGGGTGACTCTGAAACTTTGGAGGTGGAGCGATGTACGGACATGCATGCTCTTTCGAAGGGTAGTTCTCATCCTATCTGTGTGGTGAAACTCAGGCATGGAAAGATTTATCATCTTGAATTTGTCTACAAATTTTTAGCCTTTAAACTTAGGTGTGAAAAGTATCCCTCTTCCCCCGTTTTTGTAATTTCGAACAATGGGATGGCCGCAACTCTTAAGTGTTTTCTAGGTGAGCCTTCCGGTTTGAGGGAACAACAGGGTGGAACAAGTTTAGTTAAACTGGCTACAGATGTGGATCTGCCCAAGAATTACATGATTGTTATTGGGCAGGATGACTTTATCAAGTTTAAGTCTCCTTTTGTGTTTGCTCGAGATCTGCACACGCTGCGTTCCATGGTTGTATGTAGAGCGTATCTCACTGAGCAGAGGACAACCATTCAGTTTTTGGTGTTGCAAAGTGGAAACGAACACAAGACCTCCGGCGTTTTAGATATTATTCGGAAGATG

a score=36685.0
s NC_007605.genome 47163 725 + 171823 TCTCAGCAACTGTCTCGGTCTGGTCAAGTCGAGGATACGGGCGCCAGAGTCACAGGTGGAGGAGGTCCCAGGCCTGGCGTCACGCACTCGGGGTGTCTTGGGGACTCACACGTTAGGGGGCGCGGTGGTTGGGACTTGGATAACTTTTCAGAAGCTGAGACCGAAGACGAGGCGAGTTACGCTCCTTGGAGGGACAAAGACTCGTGGTCGGAATCCGAGGCGGCGCCGTGGAAGAAGGAACTCGTGAGGCACCCCATCCGCAGGCACCGGACACGCGAGACTCGCCGTATGCGCGGGAGCCATTCACGGGTGGAACACGTGCCCCCCGAGACCCGGGAGACGGTGGTGGGGGGAGCATGGCGTTATTCTTGG---CGCGCCACACCTTATCTGGCACGGGTGCTGGCTGTCACGGCCGTGGCCCTGCTCCTGATGTTTCTGAGGTGGACCTGACGTTGCAGGCCCTTGGGGAGCGG--GGGTTCTCCAGGCTCCTGGATCTGGGGCTGGCCTGCCTGGATCTGAGCTATGTGGAAATGAGGGAATTTGTGGTTTGGGGCAGGCCCCCAGCTTCTGAGGCGGCTGTGGCCTCTACGCCAGGCTCGCTTTTCCGAAGCCACTCGTCCGCCTACTGGTTGTCGGAGGTGGAGAGGCCCGGGGGCCTTGTCCGCTGGGCCAGGTCACAGACCAGCCCCTCATCCCTGACCCTCGCGCCCCATCTTGGCCCGTCC
s NC_006146.genome 41025 701 + 171096 TCTCAGCAGCTGGCCCTGTCTGGTCAGGGCGAAGAGCCGGGCGTCAGAGCCGTGGG---AGGAGGGCCTAGGACAGC------------------TTCCGAGGGCTCGCTCGGACGGGGGCGTGGCGGGTGGGCCGCGGGCGATTTTTCAGACGCCGAGACTGACGACGATAGGAGTCGCGCTCCCTGGAGGGACGAGGACT---GGTCGGGGTCGGAGGCGGCCTCGTGGAAGAAGGAACTCGTGAGGCGCCCCATCCGCGGGCACTGGGCGCGCGTGGCCAGGCGAAAGCGCTCTCGCCATTCCCGGGCGGAGCACGCGCCCGCGGAGGACCCGGCGACGGAGACGGCGGAGGCATGGCGTCCCTCCCTGTTTCGCGCCCCAACCTATCTGGCCCAGGGCCTGGCGGTGGTGGCCGTGGCTCTGTCTCTGCTGTTTCTGAGGTGGGCCTGATGTC-----CGCCTGGGGGGCACCCGAGTTTTCTAGGCTCCTAGATCTGGGGCTGGCCTGTCTGGACGTGAGCTTCGTGCAGATGCGGGAGTTTGTGGTCTGGGGCAGGCTTCCGGCCCCAGAGGAGGCCGCCGCTTCCCTCTCCGGCTCTCTCTTTAGAAGCCACTCGGCCGCCTACTGGCTGGCCGAGGCGGAGAGGCCCGGGGGGCTGGTCCGCTGGGCCCGGGCGCAGACCAGCCCCACATCCCTGACCCTCGCGCCTCACCTGGGCCCGTCC

a score=173997.0
s NC_007605.genome 47888 2217 + 171823 CTCTTGTCCCTTTCAGTGGT-------CACCGGTGGTGGGTGTGGAGCCGTGGCCTTTTGCAACGCCTTTTTCCTAGCTTATTTTTTGGTTGTGCGGTCTGTTTTCCCCGCGTTTTCCGATAGAATAGCTGCCTGGATCTGCGACCGGTCCCCTTTCTGCGAAAACACCCGGGCCGTGGCCAGGGGTTACCGAGGCCTCGTGAAGAGGTTCTTGGCATTCGTGTTTGAGCGTAGTAGCTATGACCCCCCCTTGTTGAGGCAAAACTCTAGGCCTGTGGAGCGCTGCTTTGCCATCAAGAATTATGTCCCGGGCCTGGACTCACAAAGCTGTGTGACGGTCCCGAGCTTCTCCCGCTGGGCCCAGTCTCACGCCAGCGAGCTCGATCCCCGGGAGATT----CGCGACAGAGTTACACCA---GCGACTGCACCTTCGTTCGTGGCTGATCATGCCTCGGCTCTATTGGCCTCCCTCCAGAAGAAGGCCTCCGACACCCCCTGTGGGAATCCCATTCAGTGGATGTGGTACCGCCTGTTGGTAAACTCGTGCCTGAGGAGTGCCCACTGTCTTCTGCCTATACCTGCCGTCTCTGAGGGGGGGAGAAAGACGGGCGGGGGCGTAGGGGAGGAGCTCGTGGGGGCCGGGGGGCCCTGC-------------------------------CTGAGCCGGGATGTTTTCGTGGCGATCGTAAGCCGCAATGTTCTCTCGTGTCTGCTGAACGTGCCTGCCGCGGGTCCCCGGGCCTACAAGTGTTTCAGATCCCACGCC---TCCAGACCGGTGTCTGGCCCGGATTACCCTCCCTTGGCCGTGTTTTGCATGGACTGCGGTTACTGCTTGAACTTTGGAAAGCAGACAGGTGTAGGAGGCAGGCTCAATT----CCTTTAGACCC---ACTCTCCAGTTTTATCCCCGTGACCAGAAGGAGAAGCATGTGCTGACCTGCCATGCCAGCGGCCGTGTGTACTGCTCCAACTGCGGCTCTGCGGCGGTGGGCTGCCAGAGGCTGGCTGAGCCACCGAGCGCCCGCTCGGGCTGG-------------CGGCCCCGAATCCGGGCAGTGCTGCCGCACAACGCGGCCTACGAGCTCGACC--GTGGCTCCCGCCTCTTGGATGCCATCATCCCCTGCTTGGGACCCGACCGCACTTGCATGCGGCCGGTGGTCCTGCGGGGGGTGACGGTCAGGCAGCTCCTGTATTTAACTTTGCGGACAGAGGCC-----------------------------------------------AGAGCCGTTTGCTCC---------ATCTGTCAGCAACG----------------------CCAAGC---TCCAGAGGA--CGCCCGCGAC-GAGCCTCACCTGTTCTCCTCCTGTTTAGAGGTAGAATTGCCACCTGGTGAGCGGTGTGCGGGCTGCCGTCTCTATCAGACGCGTTATGGCACGCCGGCTGCCCA----AGCCCACCCTCCAGGGGAGGCTGGAGGCGGATTTTCCAGACAGTCCCCTGCTTCCTAAATTTCAAGAGCTGAACCAGAATAATCTCCCCAATGATGTTTTTCGGGAGGCTCAAAGAAGTTACCTGGTATTTCTGACATCCCAGTTCTGCTACGAAGAGTACGTGCAGAGGACTTTTGGGGTGCCTCGGCGCCAACGCGCCATAGACAAGAGGCAGAGAGCCAGTGTGGCTGGGGCTGGTGCTCATGCACACCT---TGGCGGGTCATCCGCCACCCCCGTCCAGCAGGCTCAGGCCGCCGCATCCGCTGGGACCGGGGCCTTGGCATCATCAGCGCCGTCCACGGCCGTAGCCCAGTCCGCGACCCCCTCTGTTTCTTCATCTATTAGCAGCCTCCGGGCCGCGACTTCGGGGGCGACTGCCGCCGCCTCCGCCGC------CGCAGCCGTCGATACCGGGTCAGGTGGCGGGGGACAACCCCACGACACCGCCCCACGCGGGGCACGTAAGAAACAGTAGAGGGCACGAAACATGGTGTATGCAC-TTTATTAATAAA---CAATTACAGATACAAAAACTTGAGTCTCTCGAGGTCTGCGATGAGGCGGTGGGTGGAACGCTCCAGCTTGCGGCGAAGCTGGCTCACGAAGCGAGACAGTACTCGGCTAGCCTGACTAAGGGTGAGG-------CTATAACGCAGGTCCTGTTCCGGGGCGGCGGTGGATAGAGAGGAGGGGGATCCGGAGGGGACCACTAGGTCGCCGGAGGTCGACCCTCCTGTCACCACCTCCCTGATAATGTCTTCAATAGACAGAAATTGGGTGACCACTGAGGGAGTGTTCCACAGTA------------ATGTTGTCTGGTCGCTAGATGGCGCGGGTGAG
s NC_006146.genome 41726 2235 + 171096 CTGCTGGCTCTTTCAGCGCT-------CACCGGCGGGGGGTGCGGCGCTGTGGCCTTTTGCAACGCCTTCTTCCTCACCTACTTTTTGCTGGTGCGCTCTGTTTTCCCTGCGTTTTCTGAGAGAATAGCCGCCTGGATTTGCACCCGGTCCCCTTTCTGTGAAAACACCCGGGCCGTGGCCAGGGGCTACCGGGGCCTCGTGAAGAGGTTTCTGGCGTTCGTGTTTCAGCGCAGTAGCTGCGACCCCCCCTTGCTGAGGCAGAACCCGAGGCCCGTGGAGCGCTACTTTGCCATCAAGAATTATGTTCCCGGCCTCGACCCGCACAGCTGCGTGACGTTGCCGAGCTACTCCCTCTGGGCCCGGGCTCACGCCGGTGAGCTCGACCCTAGGGAGATT----CGCGACAGGGTGACCCCCTCTGCCGCCGCCCCTCCCTGTGTGGCCGATCACGCTTCGGCCCTGCTGGCCACACTCCAGAAGAAGGCCTCGGACACCCCCTGCGGGAATCCAATCCAGTGGATGTGGTACCGCCTGTTGGTGAACTCGTGTCTGCGAGGCGCCCGTTGTCTCCTGCCCGTCCCCGCCGTCCCCGAATGCGGGAGGAGGATGGGTGGTGGCGGGGAGGAGGAGC----GGGAGCCGGAGTGCCCTGCGAGGTTGCTGACTGGCCCGGGAGGTCAGTGTCTGAGCCGGGACGTCTTCGTGGCGGTCGTGAGCCGCAACGTCCTATCGTGTCTGCTGAACGTGCCCGCCGTGGGCCCCCTGGCCTACAAGTGTTTTAGGTCCCGCTCCCCCTCCCGCCCGGTCTGCGGCCCGGATCACCCTCCCCTGGCCGTGTTCTGCCTGGACTGCGGCTACTGCCTGAACTTTGGGAAGCAGACGGGGGGTGGGGGGGCGCTGAATT----CTTTCAAGCCC---ACTCTCCAGTTTTATCCCCGCGACCAGAAGGAGAAGCACGTGCTGACGTGCCACGCCAGCGGCCGCGTGTACTGCTCCAACTGCGGCTCGCCCGCGGTGGGCTGCCTGAGGCTGGCAGAGCCCCCCAGCGCCCGCTCGGGCTGG-------------CAGCCGCGGATCCGGGCGGTGCTGCCGCACAACGCGGCCTACGAGTTGGATC--GTGGCTCGCGCCTCCTGGACGCCATTGTCCCCTGCCTCGGCCCCTCCCGCACCTGCATGAGGCCGGTGGTCTTGCGGGGGGTGACGGTCAGGCAGCTCCTGTATTTAACTTTGCGGGCCGACGCT-----------------------------------------------AGGGCCGTCTGTCCC---------GGCTGTCAGCAGCGGC-------------------GCCAAGC---TCCGGAGGA--CTCCCGCGAC-GAGGCCCATCCTCTCTCCTCCTGTTTAGAGGTAGAATTGCCGCCGGGTGAGAGGTGCGAGGGCTGCCGTCTCTATCACGCGCGGTATGGCACGCCGGCTGCCCA----AGCCCACCCTCCAGGGGAGGCTGGAGGCGGATTTTCAGGACAGCCCCCTGCTTCCTAAATTTCAAGAGCTGCAGCAGGGCAATCTCCCCAACGACGTTTTCCGGGAGGCTCAGAGGAGCTACCTGGCCTTTCTGACGGCCCAGTCCTGCTACGAGGAGTACGTGCAGCGGACCTTTGGGGTGCCTCGGCGCCAGCGCGGCCTGGACAAGAGGCAGCGGGCCGGCGGTGCCGCCCAGGTTAGTCACTCTCACCCGGCCGGCGCGGCCTCGGCCGCCCAGGGCCAGCAGGCGCAGCCCGTGGCA------GGG---GGTGGCTTAGCGGGGGCAGCAGCGGCT---GCCTCTGCCCCGGCTGCGACCCCCGCCGTCTCCTCGTCCATCAGTAGCCTGCGGGCCGCCACATCTGGAGCGGCAGCCTCCTCG---------------GCGGCCGTTGACACCGGCTCCGGCGGCGGGGCCCAGCCCCAAGACACCTCCACGAGGGGCGCGCGCAAGAAGCAGTAGGAGACGCGGCACGCGGTGTATGCAC-TTTATTAATAAA---CAATTACAGATACAAAAACTTGAGTCTCTCCAGGTCTGTGATGAGCCGGTGGGTGGAACGCTCCAGTTTGTGGCGAAGCTGGGTCACGAAGCGAGTCAGGACGCGGCGAGCCTGGGCGAGCGTGAGG-------CTATAACGCATGTCCTGGTCGGGGGTTGCGGCGGACAGAGAGGAGTGGGCCGCAGAGGGGACCACCAGGTCTCCGGGCGTCGACCCCCCTGACACCACCTCCCTAATAATGTCTTCAATAGACAGGAACTGGGTGACAACTGAGGGAGTATTCCACAATA------------ATTCTGGTTGGTCGCTAGATGGCGTGGGAGAG
s NC_004367.genome 40552 2175 - 149696 CCGTTGGCTGTCTGCGCGCGCTCCACCCACTGGT--TGGCAATGGGGTTTCTGCTCTGTGCAATGTATTTCTGCTGGTTTATTTTTTAACTGTACGTGAGTTATTGCCGGCGTTTTCTGATGAAATCATGGCCTGGATTTACCTAACTTTTCCATACTGCGAGGGAACAAGGTCTGTTTCACGAGGTTACAGATCCCACATAAGGAAATTTTTTTGTGAAGCGTTACACAGGGCAAATTATGACCCCCCTCTTATCAAAATTGATGGGAAAACAGTGGAGAGATATTTTTCCTGGAAGAATCGTGTTCCCGGCTTAGACCAGTTTAGCTTCGTGCCTGTCCCGGCCATCAATGATTCGG--------------ATAGAAGTCGGACCTTGCCAGGCTATACTGCTATGGGAGGAGAT-----GAAGCTGCACAT------------GATGATGCT---GCCCTCCGCGCCT---TGCAGGGACATGCTTCAACTGTTTGTTGTGGTAACCCTGTACAGTGGATGTGGTTTAGGCTTCTGGCTGCATCCTGTTGCCGCTCTCGCCATTGTTTGCTGCCTGTGCCCATTG------------------GAACGGGTCGTGGCAAGGGGACGTGTAGTATTGGAGATGTGTGGGCCTGC------TCTAACGAAAACGCGGAACTA----CTGAGT---GATGTCTTTTCTGCAGTTGTGTCCCGTGCTACACTGTCTTGCATACTCGACATTCCACCAGTCGGTCCTTATGCTTTGAAGTGTTTTAGGGGCCTTT-----TGAAGCACAATGT---GCCCAGA-------------GCTTGTTTTTGTTTGGATTGTGGTTACTGCTTAAACTTTGGAAAGTCCACCCGG-------------TCATCTTCTACCTTTAAGCCCAGTAGTTATCACTTTTATCCACGTGACCAAAAGGAAAAACATACGCTAGTGTGCAACTCTAGTGGGCGTGTGTATTGTTCTAACTGTGGCTCTGCTGACCTTGGGTCTATTCCTCTTGTTGAGCCCCCTAGTG-------GGGAGGGTGTGTGGGGGGCTTGGCCAAGAATTAGGGCAGTACTGCCCCATAATGCGGCCTATGACTTCAGACAAATGGAT--CGACCTTTAGACGTTGTTGTCCCATGTCTGGGGGGCGCCCGCACTTGTGCCCGTCCAACGCTGGTCAGGGGAATGACTATAAGGCACCTCTTGTATTTAACGCTGC---CTGACTCCCTCGATAAGCCACGTTGTTTTGTGTGTGCACAAAAAACCTGGTCTAGAGAGGTGTCTGTCACAACACAAAGGCCTGACGGTGAATGCTCTGTAAAGGGTTTTGAAGATCAAGCGCTTCCAGACGAACAGGACGCGATAGATACCGAATCTATTTTCCCCTGTTTCAGAATAAAATCTCATCCCAGACTTTGGTGTGCCGGGTGCAGGTTGTTTACTGCCAGATATGG-ACGGCAGACGTCCACCTCGTCCGAATGTGCAAAGTAGGCTAGAGGCAGATTTTCCCAATCACCACTTACAAACCAAATTCATGGAATTGGTTCAAGGTAACCTTAGCGACAAGGAATACCGTGAGGCTCAAGCCGGATATCTGACATTCCTTATCGCCGAACATTGTTACGAAAACTACGTGCAGCGGATGCACGGTGTACTTCGAAGGCAA-GTGGCTCAGGCTAGACGCGG-----------------------------------------TGCAGCGTCAACTTCATCACATATC---------------------------------GGAAGTATAGCAAGTGCAGCCACGGGA------------------ACTGCCTCTAGTGTTCAGCCTTCTGCTAGTAGTGTTCCTGCCACCACACCGAGTCCTGCACGCACCATA-CCGCCCCCAGTCTCCCAGCCCCCAATAAC---TCTGTC--CGTGTCACAAGCATCCGGTACAGAC---GGTGGCGCGGGTGATACTGGTTCGAGACCAGGCCGTAGAAAGTAAAAAGTTTTATTAATAAAAGTTAATTACATATACAAAAACTTAAGTCTGTTTATGTTATTGACTAGGTCTTTACTGATCCGTCTGAGTTTCTCACGTAATTGTGCTATAAATGTTAGCAGCACATCTCTAGCCTGGCCTAGAGTGAGAGAGAATCCAAGATCGGTGGTGATATCTGTGCGGCGCAGTGCAC----------GGGATACCGGGGAAACTAGTGAATGT---GGGGATGAATTTGCGGAAAGTACGTTCCTAATAATTTCTTCTATGGTGAGAAAATTGGTTACCAGCGATGGAGTGTTCCACATTGTCAGGGTGTAGTTTTCTGAAAAGCCACTAGATGGTGATTGTGGG

a score=26783.0
s NC_007605.genome 50105 683 + 171823 GCCACGCTTTGCGAAAACGAAAGTGCTTGAAAAGGCGCGGGATAGCGTGCGCTACCGGATGGCGGGTAATACATGCTATCCTTACATTTTGGCATTTTGGGCAGCTGGGAGGCGGCGGATGGGGGTGCTTCTTTTCGCACGGTGTATGTTTGGGGACCCGCATGCCGGTACTGGGATAGGCGCACCTCGGGCCGCGCGCCAGGCTCCGAGCCGGAATGCATTGGGGGCAATGGGATTGCGGGGGATTGTTGCTGTCTGCTCCTGACAGGGAGAGACACGCGCGGCGGAGATGCAGCCGACGGCGGGGCCGCGGTGGGCTGCCCCCGAGGACGGGCGCCGGCCGCCAGCGCCCCCGTGGCCTTTGGCACGGGCCTGGCACCCACCGCTTTAATTGTGGGGGTGGGCAGGGCAGCTGCATCTTGGGGCCTTTGTGCTTGCGTTTTTTGGGGGCGCGGTGCCAATGCACCAACTGGGGTGTGCGCCGGGGCGGCCAAGCCGGACCCCAGGGCGGGTGCCTGGGGGATGGGAAAGCCG-GACGGCGCTTCTCCCGGG-TCGAACGCTGGAGTAGCGGAGGCTGCTGCGCCGGCGGCCACCACGGGCGCACGGGGTCGCAGCCCGACGGCCGTGGGGAGGCGGGTGGC---GGAGGGCCGAATCTCCGCGGCTTCTTCCCGGCCCCCCTGCTG
s NC_006146.genome 43961 683 + 171096 GCTTTATCACGCGAAAACGAAAGTGTTTGAAAAGGCGCGGGATAGTGTATGCTACCTGATGGCGGGTAATATATGCTATCCTCATATTTTTGGGATTTGCGCGGCGGGGAGGGGGCGGCCGAGGGCCCCGCTTTTTTAGCGATGTATGTTGGGGCGCCTGCATGCCGGGACTGGGGTGGTTCCACCTCGGGCCGCGCGCTCGGCGCCGAACCCGGATGCATTGGAGTCAATGGGAATGCAGGAGTTTGTTGCTGTTTGCTTTTGACAGGGAGAGGCACGCGCGGCTGCACTGCAGCCGGGGGCGGTGCCTTGGTGACCGTCTCCTCTGGCCGGGCGGCGGTGTCCATTGCCCCTGCGGGCCCCGGGGTGTGCCCACCGACCACCGCCAAACCGGTAGTGGGGGCTGGGGCCGTGGCAGCCGGGGGCTTCTGCACAGGTGGCTGATGGGGACGAGGTGCCAGACCCCCGCCCGGGGGGCGTGTGGGGCCGGGCACGGCGCCTTCCTCGAGGGGCTCCCGGGGTCTGGCAC--CCGTGCCATAGCCTCCCGTGGAATCCCACGCAGGAAGCGTGGCCTGTGCCGTGCTCGCG---ACCCCGGGCGTCCGGGGTTTCAGGCTGACGGGCGGAGGACGGTGGGGGGCTGCGGTGGACTGAACCTTTGCGTGTTCCTCCTGGCCCCCGGGCCG

a score=5815.0
s NC_007605.genome 50788 36 + 171823 TTTCTTCTCCCGTTGCATGATAGAATGGCCATAGGG
s NC_006146.genome 44644 36 + 171096 CTGCCTTTCCCGTTGCATGATAGAATGGCCATGGGG
s NC_004367.genome 43392 36 - 149696 TTTTTTCTCGCGTTGACCAATGGAATGGCTGTAGAG

a score=25390.0
s NC_007605.genome 50824 781 + 171823 TGGGTCCTGAGAGGAGGCTTGTGTGTCCTGGGGCTGGAGCCCAAAAGTCGTTAAAGATGCCGCTGATGGTGTGGGAGCTATGCCTCCCGTCGACTGGCCGGGCTTGTA-GGGGGCTGAGGGTGGATAACTGGGCTTCT-------------GTGAAGGCACCAACCCTGGAATCTGGATGGTATGTTTCTTCTGTGACCCCGAGGCAGTCGATGGTGTAGAGTGTGGAGACAATGTGTAGACGATGGGCCCTTGTTCAGAAGCCCAGGGACTTGAGGGGGGCTGTTGTGGTGCTGGTTGGGGAAGGAGCTCCAGGGAATCTTTGGGCCATGGCCTTGGGGAGCTTCCCGGAGACCGGTCTGGGCTCTCGGAAGCCCTCGTTTCGGCCCCGAAATAGGGCCTTGCCATCAATCGGGGGCCTGGGAGAGTGATGGGGGCGGCCAATCCCGGGGTAACTGTCACGTCCCGGGGGGAGGAGGTAGGAGACAGCCAGTCCCTGGGCCTGCCAGGGGCCACCTTCTCTAAGAG---GGGGCTCTGTGGGCTGGGAGGGCCAGAGGCCTCAGATTCAGCAGTAGTGCTCCCCTTTTCCCCCTGGTCCGTCTCCCCTCCTCCCAACTGCTGGAGCCGGTCGGAGGAGGCCGGGGTGTTATCTGCTGACTGAAACCCGTCCCCGCTGACCAGTCCGTGCCCCACCCTTGGGGGGAAACCGGAGAACAGCTCCTGGACGTTGCGTGGATTCGGGGGAAGCTGGTATCCAACCGGCAGTGGAGGATCTTCGTGCTCGTAGAAGGAGGGG
s NC_006146.genome 44680 766 + 171096 TGGAGCTGGAGAGGCGTCTCCCAAGCCCGGGCGCCTGGGTCCCAAAACGGACGATGATGCCGGTGTGGCGGCGGTGGCCGTGGCCCCCG----CTGGCCGGCCTGATGCGGTGGCCGCGGGCGG----CTGTGGTTGTCGGGGCCCGGCGGGCGGGGAACCCAGGCCGGGGATCTGGATGGTGTGTTTCT---GAGGCCCCGCTGCGGCTGGTGACGGAG---GTGGGTGTAGGTTATAGATGGCGGGTCCCCGCTGAGAAGCCCCTGGGCTCGCGATGGTACCTTGAGCGGCCGGCGCTGGGACAATCTCTTGAACCTCTCGTGGCCAGGGGCGCGGGGAGGCCCCGGGGGACTCGACCGCGGTGGCCGGACCCTTCTCTCCAGCTCGG---TGAGGCCCCACCGTCCCTCGAGAGTGAGGGAGAGAGGCCGGGGCCGGCTCCCTAGGGGCGGCTGAGGTGCCTCGTGGGGAGAGGGAGGGTGCCGGCCATTCTCCGGCTCGGCCGGTGACCGCC------GGGAGCCTTGGGCTTTGCGGGCTGGGTGGGACGGAGGCCTCGGAATCGGCGGCGGCGCTCCCCTCCTCATCTTCCTCCGTCTCCCCTCC--CGGACT-CTGGAACCGGACGGAGG---CTGGGGTGTTGTCGGCCGATTGGAACCCGTCCCCGCTCACCAGCCCATGCCCCACCCTCGGTGGAAAGCCGGAGAACAGCTCCTGGACGTTGCGGGGATTCGGGGGAGGCCGGTACCCAACGGGA---GGAGGGTCTTCGTGTTCGTAGAAGGAGGGG

a score=191190.0
s NC_007605.genome 51605 2159 + 171823 TTGAGTACATCGGTCGGCCATCGTGAGGCCCCGGCCGCGTTAAAGTAGAACTGCACGTCCGGCAGATTGTGCCGAT------------AGGTGAAACACTTCCAGATGATGTTTTTTCTGTTGGCCAGGATGGCCACGGTGGGGGGCCTGGC--------CTCCTTAGGTTTGGCGGCCCTGGCCTCGGTGAGAAGCTCGCGTAGCCACACGGCCTGGCGTGCAAAGATGGACATCTCTGGCTCGAAAGACTCGGAGTAGCCGTCCAGGTCCTGCAGAAAATTCAGCGAGATGGTCTCCACCAGGGACCGGAAGGGCTCAGAGTGCCCGTCGCAGTAGAGGAGGGGAGCAACGACCCTGACCTGTCCCAGGGTCTTCAGGTTAAACAGATATTGAGAGGAGACAAAGAGAGTTAGGGGCC-----GACCGAGGAAGGCCGCCGCCACGGCCGCCTCAAAAACGGAGAC------------GGGGATGGTGTCACCGGAGCCCCTCTTAGGACCGGTAATGGGAGTGCCATAAGGCATAAGATTTCTCAGGGCCCGGCCGGTAACGGTGCCGTAGGAAGACGG--GGTTTCGCGGGGGACCTCGAGTCCCTCCGCCCTGGGGAGCTCTTCTCCGCGTGTATAGGCCTGCTTCACAAAGTCGCGCAGGTAGTCCTGAAATGCGACCGGGCCCTC------CAGCGGGCGCAATGAGTGCCAGAGCTGCTGAAGGGCCTCGGGGGCGAAGCACCGGCGTGCGAGGAGCAGCATGCAGGCTCGGGCGCGGGCCGTACTTTGGTTGTGGACCAGGCCCAAGAACTCGGGGTGCGGCCAGAGGGCGGCTCGGGTATCCATCTCCTCCCAGGCGTCCTGGAAGAAGATGAAGCCGGTGGGTGGACCGGCGATGCGGTGGCGGGTGAGGCGGCGCGCGTCTTCCCCGTCGTT----GCTGCCGCGG--GT----GGTTGAGGGCATGCCCCCCCTCCCGGAGGCTGGACTCCTGACCAGCCTGTAGGTGAGGACCGAGTCCGACAGGAGGTCTCCCAAACCCCCATCTCTCGCTAGAGCCGAGACCAGGCCGAGTC--CTGCGTAG----------AACGATGGGGCGCCCAGGAAGGCGGCAGCGTAGGCCGGATGTGTGCCGACCAGCAGCGCCATCATCTCCCGTTGTTCCAATAGAATAACTTCCCGGT------CTGTGGCCGGGGCTGGATAAGGGGGGTGATTCCTAGAGGCGATGAGACTGGCGTGCGCTAAAAGTGTCATGGCCACAATGGGGTTGTCTGCCAGGTCTTCCATCAGGGCTTTGGGCGCAGAGACGTATTCCCGAAGCAGCTCCCCGGCGTTGGACTCCACGTCGGGCCAGGTGTCCCAGTAGGAGTCGGCGGCGGCGGCGCTGAGGCGGGCGGAAGCTACACTGGCCAGGGT----TCTTCTCCTCCTCTCTTGGTCATCCTGCGGGGGACCA---ATAGCTTGGG--GGCGTCCGGCTGGGGTCAGGGAAAAGGCCTCTGGGTTCTCCAGCACGGTGGGCATGACATATTCCAGAAAGTTGTGGTAGACGGGGATGTAGTTGAGCGGCTCCTGGGTGTCTGCGGAGACGTAGGCCGGGTTAAGGGGGTCGCAGGGAGACTCTGTTTCCAGCCAGAGGGTGCCGGCGTATTTCGCCGGCCCTGCCGCCGCCAGAAATTGTGCCCGCCGGGTCGGGGCTCCATTGCCCCATCCAG-----TTGGTGGTGCCGAAATCGTGATGAGGAGGGGCAGGT------TGTTGGTCAAGGGATGCTTAACGAAAACGGTAGGCTGGGCGGTCTCGTAAAAAGCCAGGAAACTCTGCTTGGCCGAGGCATAGCGCAGCAGCTTGTCCTTGA------GGAGGGCATACTGGG---AGCCAGCCGAGGCCCCAAGCGCCAGGCCCCTGGCAGCCTCCACCACGATCTT--GAGCTGGCGCGGGTCGGTGTGGCCCCTGGCCTGGGTGA------CCAGATCCTGCAGCGTTCCCTGCAGCTGGGACTCTTCCTGGGCCTCCTGGATGATGGCCTCCAGTCGGGAGAGGCGCCTTTTCCAGTCTGCGACGGTCTCCTTGCCCCCCGCGACCCGCTTGGGGTCCAACGTGGCCAGAGCCAACCTCAGCTCCTCCATGCCATCCATGGAGTTCTGGGCCATGCCCTCGACTTCCAGGAGCCGTGTTAGCTCATGAATTTCACCGTCAGCCGCAGCGGCTAGGTTCAGCCA
s NC_006146.genome 45446 2132 + 171096 TTGAGCACGTCGGTGGGCCAGCGCGAGGCCCCGGCCGGGTTGAAGTGGAACTGTAGGTCAGGCAGATTGTGCCGGT------------ATGTGAAGCACTTCCAGACGATGTTTTTTCTGTTGGCCAAGACGGCCACGGTGGGGGCCTGGGC--------CTCCTTGGGCTTGGCCGCCCTGGCCTCCGCGAGGAGCTCGCGCAGCCAGGCGGCCTGCCTCGCGAAGACGGACATCTCGGGCTCAAAGGACTCGGAGTAGCCTTCCAGGTCCTTCATAAAATCCAGGGAGACCGTCTCCGCCAGGGAGCGGAAGGGCTCTGAGCGCCCGTCGCAGTAGAGCAGCGGGGCCACGACCCTGACCTGGCCCAGAGTCTTCACGTTAAACAGATACTGGGAGGAGACGAAGAGAGTCAGGGGAC-----GGCCGAGGAAGGCCGCCGCCACGGCCGCCTCGAAGACGGAGAC------------GGGGATGGCGTCCCCCGAGCCCCTTTTGGGACCGGTGATGGGGGTTCCGTAGGGCATGAGATTTCTCAGCGCCCGGCCGGTGACCGTGCCGTAGGTGGACGG--GGTCTCTCTGGGGACCTCGACGCTCTCTGCCCGGGGCAGCTCCTCGCCCCGCGTGTAGGCCCGCCTGACAAAGTCGCGCACGTAGTCTTGGAAGGCGACGGGGCCCTC------CAGGGGACGCAGCGAGTGCCATAGCTGCTGCAGGGCCTCGGGGGCGAAGCACCGTCGCGCGAGCAGCAGCAGGCATGCCCGGGCCCTGGCCGTGCTCTGATTGTGGACCAGCCCCAGGAACTCCGGGTGGGGCCAGAGAGCGGCCCGAGTCTCTATCTCCTCCCAGGCTTCCTGGAGGAAAATGAAGCCGGAGGGAGGGCCGGTGAAGCGG------------CGGTGCGCGTC---CCCGACGTTTTGAGCCCCGGTGGCGGC----GGTCGAGCTCGAGCCCCTCTTCCTCTCGGCCGGGCTTCTGACCAGCCGGTAGGTGAGGACCGCGTCCGACAGCAGCTCCCCCAGGCCCCCGTCCCTCGCCAGGGCCGAGACCAGGCCGAGTC--CCGCGTAG----------AACGAGGGGGCCCCCAGGAAGGCGGCGGCGTAGGCCGGATGCGTGCCGACCAGCAGCGTCATTATCTCCCGTTGTTCCAAGAGAATGACTTCCCGGT------CTGTGGCCGGTGTAGGGAAGGGGGGGTGATTCCTGGAGGCGATCAGGGTGGCGTGCGCCAGCAGCGTCATGGCCACGATGGGGTTGTCGGCCAGGTCTTCCATCAGGGCCTTGGGGGCCGAGACGTACTCCCTGAGCAGTTCCCCGGCGTTGGCCTCCACGTCGGACCAGGAGTCCCAGTAAGAGTCGGCCGCGGCGGCTCCGAGGCGGGCGGAGGCCACGCTGGCCAGGGT----CCTCGCCTCCCGACCCCGG-------GCGG----------ATGGCTGG---------CCGGCCGGCGCGAGGGCAAAGGCCTCTGGGTTCTCCAGCACGGTGGGCATGACGTACTCCAGAAAGTTGTGGTAGACGGGGATGTAGTTGAGGGGCTCCTGGGTGTCCGACGAGACGTAGGCCGGGTTGAGGGGGTCGCACGGGGACTCGGTCTCCAGCCACAGGGTGCCCGCGTATTTCGCCGGCCCGGCCGCCGCCAGGAATTGCGCCCGTCGGACCGG-----CAGCGGCCCGGTCGGA---CTCGCGGGCGCC---CTGGGTGCGAGAAGGGGCCGGTCGCCGGTGTCGGTGAGGGGGCGCCTGACGAAGACGGTGGGCTGCGCCGTCTCGTAGAAGGCCAGGAAGCTCTGCTTGGCCGAGGCGTAGCGCACGAGCCTGTCCCTGA------GGAGGGCATACTGGGGAGAGCCCGCCGCCGCCCCGAGCGCCAGGCCCCTGGCCGCCTCCGCCACGATCTT--GAGCTGGCGCGGGTCGACGTGGCCCCTGGCCCGGGTGA------CGAGGTCCTGCAGAACGTCCTGCAGCCGGGACTCCTCCCGGGCCTCCTGGATGATGGCCTCCAGCCGGGCCAGGCGCCGTTTCCAGTCTGCGACGGTCTCCTTGCCACCCGCGACCCGCCTGGGGTCGACCGTGGCCAGGGCCAGCCTCAGCTCCTCCATGCCGTCCATGGAGTTCTGGGCCATGCTCTCGAGCTCCAGGAGCCTCTTCAGCTCGCCGATCTGGTCTTCGGCCGCCGCGGCCAGTTCCAGCCA
s NC_004367.genome 43981 2132 - 149696 TTGGGTAAATTTAGAGGCCATTGGAAGAATCCGTCTGCCTGAGGGTTAATGCTTAGATGGGGGATGTTACCTAGGTGCACATTTTTTGGAATAAAACACTTCCAAATCACGTTGTTCCGGTCTACCATCAAAGCCAGTGTAGGGTTTGGGGAAGAAAAGGCTTTTTTGTTTT-----------CTTCTGCCAAGTATTGCCGCAGCCATAAGGCCTGTCGCATGAAAACTGCCAACTCTGGTGGATGGGATTCTACATAGCCTTTTATGTGGCTAGCAAAATCACGCGACACGGCTTTTCCTATTGACTTGAAAGGCTCAATCTCCCTGTCGCAGTAAAGGAGTGGAGCTGCCACGCGCACCTGACCCAAATTCTTTAAGTTAAACAG----TGGGTTG-GAAATTGAGAGTAATGTGATCTTTGTTCCAAAAAAGGCAGCTCCCACAGCCAACTCAAACGCAGAGACTTCTGAATTAAATTGATTTATGTGTGAGGATCTACGGGCGGGTCCGGTAGTTGGTGCTCCATAGGAGACTAGACTGCGCACGGCTGAGCCCGTTACAGCGCCATAGG--GACTGCTAGTGTCTGGCAGCACTTTTATTTCTTCAACCTGTGGAAGGGTAGCCTCGTGTAAGTAGGCGTGTGAGACAAACATGGCCAGGAATTCCCCAAAATCCTCGTGGTGTCCTTTGCTTAGGGGACGCAGTGAGGCCCATAGCTGACAGAGTGCTTCGTGGGCGAAGCATTTCTGTGCCAACAGCAACAAACAGGCTCTCGCCCTTAAGGCATCTCTGTTGTGCACAAGGCCTAAAATCTCAGGCCGTCCCCAAAAGTACGATGTGTAATCAACCTCTTCCCAGTTTTCAGGAAAAAATATGAATCTGCC------ACCATCGGTGCCG----------GTCAGTG---GTTTTTGAGACCAATTTACGCTGCTGTGT--GCGTAGGGTGGAGGGTCGGCCA---------------GAGATTCTG----------GGGTTAGTACATAGTCTGACAG------------------GTTGATGGTCAGGTCAGAAATTGGACCACATATGCTGTGCAGTGCTTCCACAAAGGAATCAGCTGTTAAAGCGGCCTCAACAATCGCTGGACTTAGGCTAGCGACCAATGTTATCCACTCGCGTTGATTTAAGAAAATAACATTACGGTCCCATCCTTTGGCCTTTGGCGATAGATGGG--------CTACGCAAAGTGAAGCT-GCATGTGAAAACAGGGTCATAGATACCATTGGATTACCCGCCATAGACTCACACAATAACTCGGGCACCGATGTATATTCCTCCAGTAAACGTGTAGCATTGGTGCGAATGTCGGGCCAGGCTTCCCATACGGCATCTGCGGTTGCCACGTGGAGACGTGCGGAAACCACACTGGCAAGTGTGCAGTCGTCTCTGCCGGTGTATG-------TTGGGGAACCATTTATAGCTGGCGCTAGAGCTCGGCTA-----AGTGTAAAGGCTTTGGGGTCTGCTAACACGAATGGCACTGAATATTCCACAAAATTATAAAAAATGGGTATATAGTTAAGTGGCTCATGGGTTTCAGAGGTCACGTAGGCTGGATTTAAAGGGTCGCAGGGGGAAATAGTTTCTAGCCATAATACTCCTGCGTACTTACTAGGTCCGGAGGCTGAAAGAAATTGAACCC--TGGAGTAGGAGACCATTGAACCGGGTGAAGATGTTACCTGCGTC------------------GCCGCATCTACATTGTTGTCTAGAGGGAATGTGACAAAAATGGCTGGTTGGAGGGTCTCATAGAAAGATAGGAAATACTTCTTGGCTGTGGCATATCTGAGTAACCTGTTTCTAATTGTTTTTATCTCATCTAGGGATGAGC------GGTTCCCTATCTGCAGCTCTTTTGTTTTGTCTATAACTGTTTGAAGAATTTGCGTAATTAAAT--------TGGTTTGAGCCATATATGTCAAATTCTGTAGAGTGGCATTAAGATCAGTTTCCTCTTTCGCCTCAGAGACAATTTCTTCAATATTTTGTATACGACGGTTCCACTCTGACACAGTTTCCTTCCCACCAGTAACCCGATTGTGATTGAGAGTAGACACTGCCAATTTGAGTTCATCAATGCCATCCATATTGTTATTTGCTAGGCTTTCAAGTGCCAGAAGGGGTTCCAGACTCAAGACTTCACTTGTGGCTGCCGTGGCTAAATCCACCCA

a score=64849.0
s NC_007605.genome 53764 1141 + 171823 GGCACCCGCGCCCCCAGCTAAGGCCAGGGCTCCTTCGGAAAGACCCCGCACGGCCTCGCAGATGCCCCGGATCCACTTGGCGGCTGCCAGGGATTTCCGGTAGGGCCATGAGCCGTTCCCGGCCGCTGCCCGGGCCAGGGCGGCCTCGAGGGGAGCCTGGACAGGGGCTTTGGGCGGGGA------GGGAAGCAGGCTCCGGAGTTCATCGTCGGGGGCTTCGTCGCGTGACCTGGAGAGGACGGCCTCCAGAGCCGTGTGAAAGCCCCGCCGAGTGCTTGCCGCCATCTCGTGGGCCTTCGCCATCAGGGTCTGGCTCTCCCGGACCTGCTCTTCCAGCGCCCGGACCTCGGCCGCCTCGGCCTCGGTCAGCAGCTCCGAGAAGAAGTCCCCCGTGGCCTGGAGGAGATCGTCCCGCTCTCGCCTTGTCAGCAGCTGGGGCTTCTTAGGCCAGAGCGCCGAGTCCGAGGCCAGCCTGGGCGGGGCGGTTGCCTGGGGGATAGTTGGAGGAGGAGGCAGGTTAGCCTGGCCTGGGTCATTAGTGGCTTCGGGTAGCGTCCGATCCACGTACTCGCTCACGATGGCCGTCAGGGCAGCCTCGGCTGCTCGTCTTTTTTCCAGAAGCCCGGCCAGCCCCCGCTCGTACTCCGCGTAGGGGGCCTCCAGATCCGTGTTGACCACCGCTGATTTCATGTCCGGGGACTGCAGGGCCTGGCGCGTCTGCGCGAGGGCCGAACGGATGGCATCGGCCGCCGTCCTGGCGCGAAAGAGGGCCCCGGCCGCTTCCTCCGCTCCTCGCCCTCCTCCTCCTTCTTTGGCGGTAGCCGCGGGGGTGGCGGGCCAAGCGTCCAGTCTGGCCAGAGGGCCGGTCTCGATATCCGTGAACCAGCCGGGTTCCGCGGCCTCCATTCTCTCCGCCGCACCACCATCGTCCACGAGCAGGGATCGCAGTCTCTCCCTCCTCACCCTCGTTATTCCCAATAGCATAGCGGCAAGGATCTGTGTGAGGGAGTCCAAGATGTCCGTGTTTCTGGCTACTGC---------CGCCGCTGCTGCCGCGGCTGAG------TCCGTATTGTCTGGCAGCAGGGAGGCCAGCAGGGTGTTCCAGTCATCGGGCGAAGTGGGAGCGGGCTCTGGGCGTGCCCCCAGC
s NC_006146.genome 47578 1132 + 171096 GGTTGCGGGGCCCCCGGCCAGCGCCAGAGCTCCCTCGGCGAGACCCCTGACGGCCCCGCAGACGTCCCGGATCCACTCGGCGGCCGCCAGGGATCGCCGATAGGGCCACGAGCCGTCTCTGGCCGCGGCCCGGCCCAGCGCGGCGGCCAGGGTCTCGTGGATGGAGGACTTGGGCGTGGAAGAGGTGGGGAGCAGCGCCCGGAGCTCGTCGTCCGGGGCCTCCTCGCGCGCCCTGGCGAGTACGGCCTCCAGGGCCGTCTGAAAGCCCCGTCTAGCGCCCACCGCCGTCTCATGGGCTCGGGCTGCCAGAGCGCGGCTCTCGAGGACCCTCTCCTCCAGCGCCCGGACCTGGGCCGCCTCGGCCTCGGTCAGCAGCTCCGAGAAGAAGTCCCCCGTGGCCTGGAGGAGATCGTCCCGCTCCCTCTTGGTCAGGAGCTGCGATTTCTTTGGCCAGAGCGTGGGGTCAGAGGT---------------GGCTGGTGGCGGGAGGCTTGGCGGGGGAGGCACGGCGGGCCGGCTCGGGTCGTCCAGCGCCCCGGGCAGCGTGCGGTCCACGTACTCGCTCACGGCGGCCGACAGCGCGGCCTCGGCCGCCCGTCTCTTCTCTTGGAGTTCGGCCAGCCCCCGCTCGTACCCCTCGTAGGGGGCCTCCAGATCCGTGTTGACCGTCGCCGACTTGGCATCCGGGGACTGGAGGGCCTGGCGCGCCTGGGTGAGCGCCGCGCGGAGGGCCCCCGCCGCCGTCCTGGCGCGAAAGAGGGCCCCGGCC---TCCTCCGCCCCTCGCCCTCCACC---------GTCGGAGGTGCTGGCGGTGGTGGGCCAGGCGTCCAGTCTGGCCAGCGGGCCGGCCTCGAGTTCCGCGAACCACCCGGGCTCCGCGGCCTCCATTCTCTCGACC---CCGCCGCCGTCCCCGAGCAACGCTCGCAGTCTCTCCCTTTTCACCCGCGTTATTTCCGATAGCATGGCGGCCAGGATCCGCGTGAGGGTCTCCAGCACCTCCGCGTTCCTGGCCGCCGCATCCGCCTTCGCCGTTGCCGCCTCGACCTTGGAATCATCCGGGGCCTCGGGGGTCAGGGAGGCCAGAAGGGTGTTCCAGTCGTCGGGTGCCGTGGGGGCGGGCTCCGGGCGGGTGCCCAGC

a score=177717.0
s NC_007605.genome 54905 2356 + 171823 GCCTTCCTAATTCTGGCCCAGGCCTCATTCGCCTC--TCGCGCTCGCCGCTCCTGCCTCTCCTTGTCTTCCTGTTCTCGGAGCTTCTCCTTTTCCTTGCGCCCGGTCTCCATAAGCTGCCGCAGCTTCTTCTCATACTGTCGCTTGAGCTCTTTGTTGGGGGCAGTGTCCAGAAAGGCCTCGAGCTGTTCCTCGGTGGCGGGCTTAAAGCCTTCGGCC---TCCAGGCGCCAGGCCTGCACCTCCTTCTGTCTGAGCTGATCGTTGTTGTTATTCTTCAATTTCTGCAGGTAACTTAGGAAGCGTTTCTTGAGCTT--CCCTGGGATGAGCGTTTGGGAGA----GCTGA----TTCTGCAGCCCAGAGAGTAGTCTCAGGGCATCCTCTGGAGCCTGACCTGTGATCGTCGCATCATAGACCGCCAGTAGACCTGGGAGCAGATTCACCGCCGCGGCCGTCTCCTTTAAGGTGCTGTGAGTAGCAAAATTCTGCAAGGCCACTAGGCGCGCTGGCTCCAGCGTCAGCCGGTTGCCCATCTCGAATGTGTGCAGGGCCTCTGAGACCATGGGGTCCAGGATGCGGTCAATGCCATCCTGCACCTCAGGGTCAAGGACCGGCAAGTCACGATAGAGGTGGTCTATGCTCTCCTCGAAGGAGGCAATGTAGTTATCGATGGTGTAGAAGGTGATGGATTTCAGGATGTTCATCAGGTACTTTTTGGAGCGAACAATCTGCTGTATAGTGTCACGTAGGCGGATGTACGTGGGGTTCTTTGCGGCCCCGACTATCGACCCTGCATTTGCGATGTACTTTTCTATGACGGGGATGGTGAGGGCCGC--------------GGTGTCGG-CCAGCGGTGGCGTGGCTTCGGGGTTGTCGTGGTTG----GCGGGTGTCGCAGAG--------GGAGAGGCGGGAGAGATG-----------GGGGCGCCT----------GGGGCCGAGGC-----------CACACCGGCCAGGCCCAACATTGCCTCGATGTCGTCCAGGATGGTGCGGAG---GCGCTTTTCGTTTTCTCTGGTGGTCTCGAGCTCCTTCTGTTTTTTCGCGACTGTCTCAAACTCTGGAAGGGGGGCAATGCTGGGGTCGTCCTCCTCAACTCGCTCCAGGGGCCAGGGGATACCGCTCATATCACTAAGGGCGGTGCCCAGGTAGAGGAGCTCGCGATAGTCCCATTCAATGGACGTGTACCGGATGTTTAGGAGAGGCAGGGAGGCGATGATCTGGCATGTGTGCCGCAGGTGTGTCAGGAGGTCGTCAAAATCCATCACTGTTGGGAGGCTTGGGTCCTCAAGGTAGGAGAGATAATCGGAGGCCGCCGAGGCCACCTTGTCCCTGATGTCCGCCGTACACCTGCGCACGTGCAGGGCC-GCATTCTTGGACCGGACGGCCACGTTGTGGACAAAGGGGGG---------CACTGAGGCGGCGGGAGGGGCCCCATACTCTATCGCTGTCAACAGCGCCAAAAAGCGGACGTCCTCCTCATCTACCCCAGCCTG--TTGTCTGGCCACGGCCGTTCGGGC-------GGCCTCCGCCAGGGATAGGAGGCGCTTCCAGCTTTCGTCGTCCAGGACCAAGGGGACGTCCACGT-----GCGGGCCCCTGTAGAT-----------GGAATTATCCTCGGGTTCTCCTCCTCCTTCCCCC------GCCTCCTGATCTCCGCCCGAG-----------AGCAGGTCGGTCAGGCGTCTGCGGGCCGCCTCCAGGTCAAATTTTCCATCGTCGCTCTCGGCCAGCTGGGGAATTTCAGCCAGCATCTTAGCACCGGCATCTACAC---GGACCGCGTCCTTCGTGGCCAGGGACGGCAGGCAGGCCTCCAGCTTTGCGGCCAGGTGCTTATGGAACTCTCCCGCTCTTCCCTTGTTTTCTGATAGCATGTTTGCGAGGTTTTGGATGTTAAGTTCGGAAGTGAGCAGTTGCTCCAGGTCCAGCGTGGGGACCTGCAGATGTCCCGAC--------CAGTCCTTTAAGAA------TTCCAGCAGATTTAGCACAGACGATCGGTCCCTACTCCTTATTAGCCCCTGCTCGAGGACCACTGTCACAAGAAGATAGTCTATCATGCTCAAGGCATCTGCCTCTGGCACTTCCCGGTTAGAGGCCGGGTCGTAGACGATGGCCTGTTCCTGGTAGGTATGTCCGG--CTATTCTCGCAATGTTGCTCTCGAGGGGCACAAAGTCC--ATCTCAGGAGTCTCTATGTCAAAGGTGGTCTGATAGTAT---------TGGCTCCTGGCGGTGTCCAGTGTGATGGGGGACGTGGGGGCACTGGAT-------------------CC------CGATTCCAGGCTGTTGGAGAACACTTCATCTTCGAACATGTCTTCATCCTCTGTGGTGGGGATA--TCGGAGGCTAAGTCGCTCTCCGCTTCTTCAGAGTCGGACATGGATAGGAAAGGCTCCTCTAGGTCAGACA
s NC_006146.genome 48710 2365 + 171096 GCCTTCTGAATCCTGGCCCATGCTTCGCCGGCCTC--CCTCGCCCGCCGCTCCGTCCGCTCTCTGGCCTCCCGCTCGCGCAGCAGCTCCTTCTCCTTGCGCCCGGCCTCCAGCAGCCGCCGCAGCTTCTTCTCGTACTGCCGCTTCAGCTCTTTGTTGGGGGCGGTGTCCAGAAAGGCCTTCAGCTGCTCCTCGGAGGCGGGCGCGAAGCCGTCGGCC---TCCAGGCGCCAGGCCTGCGCCTCTTTCTGTCTCAGCTGATCGTTGTTGTCATTCTTCAATTTTTGCAGGTAACTCAGAAAGCGTTTCTTGAGCTT--CCCGGGGATGAGCGTCTGGGAGA----GCTGA----TTCTGCAGACCGGCTAGGAGCCGCAGGGCGTTCTCCGGGGCGCGGCCCGAGACCGTCGCGTCGTAGACAGCCAGGAGACCCGGGAGCAGATTCACCGCAGCGGCCGTCTCCCTCAAGGTGCTGTGAGTAGCGAAATTCTGCAAAGCCACCAGGCGCACGGGTTCCAGGGTCAGCCTGTTGCCCGTCTCGAAGGTGTGCAGGGCCTCGGAGACCATGGGGTCCAGGATACGGTCGATGCCCTCCTGCACCTCCGGGTCCAGGGCCGGTAGCCCCCTGTAGAGGTGGTCTATGCTCTCCTCGAAGGAGGAGATGTAGTTGTCGACGGTGTAGAAGGTGATGGATTTTAGGATGTTCATCAGGTACTTCTTGGAGCGCACGATCTGCTGGATGGTGTCGCGCAGGCGGATGTAGGTGGGGTTCTTGGCGGCCCCCACGATGGACCCGGCGTTGGCGATGTACTTCTCCATGACCGGGATGGTGAGGGCCGC--------------GGTGTCGG-CCAGGGGCGGCGTGGCATCTGGATCG------------------------------------------GCGGGTGATCCG-----------GGGGCTCCTCT-------GGGGGCGGAGGC-----------CACGCCGGCCAGGCCCAGCATGGCCTCGATGTCCTCCAGGATGACGCGGAG---GCGCTTCTCGTTCTCTTTGGTGGCCTCGAGCTCTTTCTGCTTTTCGGCGACCGTCTCGAACTCGGGCAGGGGGGCTATGGCGGCGTCGTCCTCCTCCACCCTCTCCAGGGGCCACGGAATGCCGGTCATGTCGCCTAGGGCGGTGCCCAGGTAGAGCAGCTCGCGGTAGTCCCGCTCGATGCTCGCGTGCCGGATGTTGAGGTCCGACAGGGAGGCAATGATCTGGCACGTGTGCCGCAGGCGGGTCAGGAGGTCGTCAAAGTCCATCACCGTCGGGAGGCTGGGGTCCTCCAGGTAGGAGAGGTAGTCGGAGGCCGCCGAGGCCACTCGGTCCCGGACGTCCGCCGTGTACTTGCGCACGTGCAAGGCCCGCGGTTTTGGACCGGCCG-CCACATTGTGCACGAAGGGGGG---------CACCACCGAAGCAGAAGGGGCCCCGTACTCTATCGCCGTTAGCAGGGCCAGGAAGCGGACGTCCTCTTCGTCCACGGCGGCCCCGCTTGTCCGGCCACG--CGGACCGGC-------GACCTCCGCCAGGGACATGAGGCGCCGCCAGCGCTCGTCGTCCAGGACCAGGGGGGCGTTTGCACTTGCGGCGGGCTCGGGTAGGCCCGGGGGGTGAGTGGTCAACCCCTTCCTCTTCCATCCGTTCTTCCTTGACGGACTCTCGTCCTTCGTCGGGGCCAAGGGGCGCAGGAGATCTGTCAGGCGCCGCCGGGCCTTGTCCAGGTCAAACTTGCCATCCGCGGCCTCGGCCAGCCTGGGGATCTTGGCCAGCAGTCCCGCCGCCGCATCCACGC---GGCTCGCGTCCTCGGCCGCCAGGGACGGCAGGCAGGCCGCAAGCTTCGCGGCCAGATGCATGTGGAATTCGCTCGCTCTTCCCTTGTTTTCTGATAGCATGGCGGCGAGGTTTTGGACGTTGAGCTCAGAGGTCAGGAGCCGCTCCAGGTCCCGGGTGGGCACCTGCAGGTTTCCAGAC--------CAGTCCTTTAGGAA------CTCCAGCAGATTCAGGGCGGCTGAGCGTGACCGGCTCCTGATGAGACCCTGCTCCAAGACCACCGTCACCAGCAGATGGTCTATCGTGCTCAGGGCGTC--CCTCCGGCACTTCCCTGTTAGAGGCCGGGTCATAGACGAGGGCCCGGTCGGGGTACGTGTGTCCGG--CAATCTTTTGAATGTTGCGCTCGAGCGGGCTAAAGTCC--ATCTCGGGCGTGGCCATGTCAAAGGTGGTTTGATAGTAG---------CGGCTCCTGGCGGTGTCCAGGCTGGTGGGGGATG-AGAGGCGTTGGCCATTGTCCTCCTCCGTGAGGTC------CGAATCC-GGCCGTTGGAGAACACATCATCCTC---------CTCCTCCTCGCTGGTGGGGATA--TCGGAGGCAAAGTCCATGTC---TTCTTCAGATTCTGACATGGATAGGAAAGGCTCCTCTACGTCAGACA
s NC_004367.genome 47236 2371 - 149696 GCCCGTTGAATGTTTGTCCAAGCCGTTTCAGCATCGGCCGTGATTTTCTCCATGGCTG--CCTTGGCTTCTTGTGCATCCCGCCTTTGTTTTTCTTTTCTCTTTGCCTCTAAAGATGCATGGAATTTCTTTCCATATGTTTTCTTGAGTTTGTCGGATGGAGCTGTTGCTAATAAGGTATTGACTTCTTCCATAGATGAAGGGTCAAAGGCATCTGCCCTTCTCAGCCACTCGGTCTCCTTTTGTTTCT---CCAATTGACTTTCTGTTTCGTTTTTCATTTTTTGCAGGAGTGCGAAAAGCCGCCTCTTGATCTTTCCCCTAAGAACAGCCCTCGACACATTTCGCTGAACACCTCTCAAGA--GATCAGAAGCCTTAAG--------TGGATTTTGACCGCATCGAACTGCATCGTAAGCCGCGAGGACACTTGGGAGAAGATTGACGGCTGACACATTTTCTTTGCGGGTACTGTTTGTCGCATAGTTTTGAAGGGCGGCGAGTCTGGCGGGTTCCAGACTTACCCTGTTACCGGTCTCAAACATTCTAATTGCTTCATCTATCATGGGTGGGAGGGCTTCATCTATCGCATCTTGAATTTCAGGGTCTAAACGTGGCAGGCCTTTTTTGAGGTGGGATAAGTTTTCCTCTATTGAAGCTATAAAGTTATCGACAGTGTGAAAAGAAATCGACTCTAGAATTGAAAGCAGATATTCCCTGGAGTGAACAATTTGCTGGATTCTGTCCCTAAGACTTATATAACGGGGGTTCTCATTGGCGCCCACTATTGCTCCGGCGTTGGCAATGTAGCGTTCCATCACTTGTATAGTCATGGCCGCTGCCTGGCCAGTTGGTTGTTGGTCCGGTGGTGAGCCATCATCTTGATTA--GAGATTGTGCCTTCGGTGCCTCCAGGCGCTTCTTGTACCTCCGGCTGATCTACATTATCAGATGAGGCATTACTGGAAGAGGGCGGCGGAGGAAGGGGAATAGGAATTCCAGCCATGCCCATCATGGCTTGTATATCATCCAGGATTATGACGAGCCTGCGCTGATCTTCATTTGTTTTGGACT---GGTCAGCCTGCTTTTTCCTAACCGTATCAAACTCTGGTATAATTGTGATTCCGGGTTCATCCTCCTCCACGCGTGACATGGACCATGGAAGACCACTGATGCTACTCATGGCCGTTCCTAGATACAAAAGCTGGTTGATATCTTCCTGGATATTTGGATATTCTAAATTTAGGGTTGGAACAGCTTGTAGGGTTTTAGCTGCGTTTTTCGTGGCCATCAGTAGGTCGTCAAACTCAAGAGCTATTGGCCTCTCAGGATTGTCTAGATAATCAAGGTAGTCAGAGGCCGCCGCGGCGGCCTTCCTGTTGGCGTCTTGTATGTATCTTTTAACGTAGCGGGATAGTATTTTTGCCTTTTCAG-CTACATTGTGAATGAAAGGGGGTGGTAATGATACCAGTTCACCAGAA------CCAGTTTCCAAAACGGTGAGCATACCCAGGAATACCACATATTCCTCATCAACCGTTGCATG--CTGTGCTTCTATAGCTCCCCTGGCCCGTATAGATTGCTGTT--GGATGATGGACCATGTCTGTGT-----GTCGATGGCTAGGAGTGTGTCTCTAC------CGGTTTCTGACGAAG-------------------------GATCTTGCACCCTGTCCA--------AACTTGGATCCGACGCCA--------------ACGCGGTTATTTTGGC----TCTGGCAGCTGCTATGTCATATTTCCCATTGGTTGCCTCTAGTTCATAGGAAATGTCTTCGAGAAACTTAATCACTGCCTGAGTTCTTGGAACCGTTTCT---GTAATGAGTGAGGGAATACAGGCTTCAAGTTTGGCCGATAGATGCCCGCGTAGCTCTGCTGTTTGCAGCGCGTTTTCTGATAGAGCAGCGGCGATGTTTTCCAGATGTAAGTCCGTATTCAGCAGAGTTTCTAGATCTTTATAAGGGATGAAAAGCTTCTTAGCCAGGGATAACAAATGTGAAAGTAATGGCTTTGCTGCAGATTCATTGCGTTTTA--------------CAATTACACCTTGTTCTATAACAGTAGTAATAAGAATGTGGTCTATCGTTAACAGGGCTTCGGCTTCGGGAACTTCCCTGTAGGATATTGGGTCATACACAATGGCTT--TACTTGTTGCTTTGTGCGAGTCTATAATTTTGATTGAATCTTCTAAGGGGCTAAAGTCCAAATCCCAGGTGCCATCA--TCAAACGTAGTCTGGTAGTAGTTTGTTCGCTGACTCTT-----TATAAAGCTTGGTGA-------AATTGCAGCGTGT-------------------TCTATAGACGATTCCGTGTCTTCTGATGCACTGTCATGATT-----------------------TCGAAATAGCCCGTCCATTGAATCCAGTTC---TTCATCAGAATCAGACATCGAAAGAAAAGGTTCATCTGCATCTGATA

a score=1919.0
s NC_007605.genome 57261 31 + 171823 GGTAGCGGACGAGGCCAGAACCCCCAGATGC
s NC_006146.genome 51075 31 + 171096 GGTAGCGTACGAGGCCGGATCCCACGGAGGC

a score=-2196.0
s NC_007605.genome 57292 71 + 171823 ATCATCCCCAAAGGAGGGCTGCTGCCCGAAGGGAGGTGATGGGGATATCTCCGTTCCAGCCCTGTCAGCGG
s NC_006146.genome 51106 44 + 171096 ATCTTCTCCC---GATGACTGCCGCTGGACAGAAGGCAGTGGGGAT------------------------G
s NC_004367.genome 49607 37 - 149696 ACACTCTTGT---TATGGCT--TGTTTGGGAGGAGG-GGTGTG----------------------------

a score=5233.0
s NC_007605.genome 57363 423 + 171823 CCGGGGGATGGTTTTTTTCTGGTTCGAGTGTCGTGGCTGATGGTGG-----GAGCTGCTG----------AGCAGGAGGAGGAGCCGGGGTAGCTGATGGCAGGGGCTGCTG------------------------CTGAGGAG---------------GAAGAGGAGAAGGAGCCCGGGCGGCTGATGGCGGGGGCTGCTGCTGAGGAAGAAGTGGAGAAGGAGCC-GGGGCGGCTGATGGCGTGG----GCTGCT-------GCTGAGGAA---------------GAAGTGGAGAAGGAGCCGGGGCGGCTGATTGCGGGGGCTGCTGCTGAGTTGGAG---GAGGAGAAAGAGTCGTGGTGGTGGGGGCTGCTGCTGCAGTCG----GGGAAGGGGATGGGGTGGTCAGAG----GGATTTTTGGGTTC--GAGGGAGCT---------GCCTGTGGCAGAGGGATGGGTATTTGCAAAGGGAGGCGAGGAGATGGAGTGACTGAAGGAGCGATAGTTGAGA
s NC_006146.genome 51150 501 + 171096 TTGAGGAAGGAATTTGTTCTGGCTCGGAGGTCTCCACTGGTGGAGGCTGAGGAGTCGCTGTAGCTGTCGGAGTGGGCTGTGGAGCCGGGGAGGCTGCTCGAGGAAGCTGTGGAGCATGGGAGGTTGCTTGGGGGGGCTGAGGAGTTGGAGTAGCCGCTTGAGGGGGCTGAGGAGTTGGAGTAGCCGCTTGAGGGGGCTG---------AGGAGTTGGAGTAGCCGCTTGAGGGGGCTGAGGAGTTGGAGTAGCCGCTTGAGGGGGCTGAGGAGTTGGAGTAGCCGCTTGAGGGGGCTGAGGAGTTGGAGTAGCCGCTTGAGGGGGCTGAGG---AGTTGGAGTGCGCGGGACTAGAGGTGTGGAGATGGGCGGGACTAGAGGTGTGGAGATGGGCGGGGGCTGCGGCGTCGGGAGTTGGGAAGTTGTGGGGTCTGGCGGGGGTTTGGGAGTTGGGCTGTG----AGGGATGGGGATTACTGGAGATGGGTGGGGAGGCGGCGCGGCCGAAGGGG---------GGA

a score=12740.0
s NC_007605.genome 57786 217 + 171823 CTGGCGCGGGGTGGGGTGTCGGGGAGGCGGGTGGTGATTGGTGAGGGATGGGGATTACTGGAGGGGGAAGGCGAGCTG---CTGAAGGGGGGCGATGGGGCGGAACGTGGGTGCGTGGCAGCTGATCATCCTCTGTGTCAGTGG---TGGAGGACAGAGGGAGGCGGCGGCCGGAGGTGGGCTTCTTGTGGGGGCTATCTTTGCCCAATCCCTTTTTCCTCTT
s NC_006146.genome 51651 199 + 171096 CTGAGGCCGGTTG---CGTCGGGACAGCCGGCTGAGGTTG---AGGGACGGTGACTACCGGAGCAGGGAGGCGAGTAAGAACTGAAGGGGGGCGACGGGGCGGGG---------------GCTGATCGTCCTCCGTGTCGGTGG---TGGAGGACATGGGGAGGCGGCGCCCCGAGGTGGGCTTCTTGTGCGGGCTGTCCTTACCAGGCCCCTTTTTCCTTTT
s NC_004367.genome 49644 204 - 149696 CTGGGGAGGAGGGGTGGGCTGGGGAGGAGGGGTGGGCTGG---GGAGGAGGGGTGGGCTGGGGAGGAGGGGTGGGCTGGG-GAGGAGGGGTGGGCTGGGGAGGAGTAGGAGTCAG-----CCTAATTTCCATTTCTGACTCCGAATCTGAAGAAGATAAA----------CCATAAATGCGTTTCTTATTAGGAACATCTTTCCCCTTAGTCTTTTTCCTTTT

a score=14003.0
s NC_007605.genome 58003 431 + 171823 GGGAGTCTGAGGCGCTGCGCCGCTCGACGCCCTTGGTGGCGTGGAGGGAGCGGGGACCCCGGGGGTGTGACCTAGGCCGGGGATGGGGATGAAGAGGGGAGGGCTGGAGGCCGGGGCCGCGGAGGCCGGGGCCGCGGAGGCCGGGGCCGCGGAGGCCGGGGCCGCGGAGGCCGGGGCCGCGGAGGCCGGGGCCGCAGAGGCCGGGGCCGCAGAGGCCGGGGCCGCAGAGGCCGGAGACGACGGCGGGGAGTTGGTCTTTGCAGGACTATACCTGGCGGCAGGGAATGAGTCGGATGTGAAAGATCGAGAGGGCAGTGGCCTGAGGTTATACGGTATTATTCGCCGTTCAAACGGTAGCATGACGGGAGGGCTGCTATCAGCACCGGGCGTCCCCGCCGCCTCCCCATCACTGGACACAAGCTCGGGCCCCA
s NC_006146.genome 51850 350 + 171096 AGGGGTCTGAGGCGCCAAGCCACCCGTTCCCCGGGGCGGCGTGGAGGGGGG------CTCGGGGCCTGGCCCGAGCCCGGGGATGGGGATGAAGAGGGGAGGGCTGGAGGCTGCGTCGGCGGGGGCCT------------CCGAGGCACCGACGGGCGGCCCCGGTGCGGTCTG---CGCGCCAACTGG------------------------------------------------CGCCGACGGGGAG---GTCTCCG---------GCATGCGGGCCGGGCGCGTTTCGGACGAGAGAGAGCGAGAGGGCAGCGGCCTGAGGTTATACGGTATTATTTGCCGTTGAAACGGTAGCATGACGGGAGGGCTGCGGTCGGGGGCCGGCGAGGCCATCTGTTCCCCGTCGCTGGACACCAGCTCGGGCCCCA

a score=102903.0
s NC_007605.genome 58434 688 + 171823 CCAGGTCAAAGCCGCTGCCGTTGGCCTCATAAAAGTCATACACGCCATAGTGTTCCAGCATAAAGATGCGGGGGTCCTCTGTCTCAAAGGCCTCGGGTAGAAAATAGAGATGCACGCAAGTGTACTGGGCCCCTGGTGCCCCCACGTACTGCAGGATGTCGTGCGCATAGGTGCTGACTCTGACATGGGCGGGGGTGCCCGGGGCCGCATCCTTCTGGCAGTGGGGGTCAAACAAGTAGAAGGAGCCATCTGTCTCGATGATGATGGCCCCCGCGTAGATGTCGCAGATGTAGAGGATGAACTGGGCCACCCCGTTGTAACTGCCGTGCAGGACCTCGGCCAGGGACTGAACAACTGCCGAGTTTGCGATCTGGGCAGGGAATAGGACGAGGCCAAAGATCTCCGCCGAGCGGTATATGTGCACGCGCCCACCGCCC---CTCAGGACCACGGAGCTGGGCACGTCCGTCAACTGGGCCATCTCGTGCCCCTTGAGGATGCCGCTCTGGCGCATGAGGGCATCCAGCCGCGCCCCCTCGTCCAGGACCTCGTCCAGCTCAGGGCGGGAGGTCAGGGGGCGGCCGGCCAGGAAGCTCTTGACCAGGTAGAGGACGCAGTTGCTGACGCACTGGATGCCGGCAAAGCGGCCAAACTTGCAGTGGGCCTGGTTGCACGAGGCCGTGCCTAGGAT
s NC_006146.genome 52200 688 + 171096 CCAGGTCGAAGCCGCTGCCGTTGGCCTCGTAAAAGTCGTACACGCCGTAGTGCTCCAGCATAAAGACCCGAGGGTCCTCCATCTCGAAGGCCTCGGGCAGAAAGTAGAGGTGGACGCACGTGTACTGGGCCCCGGGCGCCCCCACGTACTGGAGGATGTCATGCGCGTAGGTGCTGACCCTGACGTGGGCCGGGGTGCCCGGGGCGGCGTCCTTTTGGCAGTGGGGGTCGAAGAGGTAGAAGGAGCCGTCCGTCTCGATGATGATGGCCCCCGCGTAGATGTCGCATATGTAGAGGATGAACTGGGCCACCCCGTTGTAGCCGCCGTGCAGGACCTCGGCCAGGGACTGGACGACGGCCGAGTTGGAGATCTGGGCGGGAAAGAGGACGAGGCCGAAGATCTCCGCCGAGCGGTAGATGTTCACGCGCCCGCCGGCC---CTCAGCGTCACCGAGCTGGGCACGTCCGTCAGCTGGGCCATCTCGTGCCCCCTGAGGATGCCGCTCTGGCGCATGAGGGCGTCCAGCCTCGCCCCCTCGTCCAGGACATCGTCCAGCTCCGGGCGGGAGGTCAGGGGGCGGCCGGCCAGAAAGCTCTTGACCAGGTACAGGACGCAGTTGCTGACGCACTGGATGCCGGCGAAGCGGCCGAACTTGCAGTGGGACTGGTTGCACGAGGCCGTGCCCAGGAT
s NC_004367.genome 50090 691 - 149696 CTAGGTTAAAGTTGTGGCCGTTACCATGCTCAAAGTTATAGATGCCATAATGCTCCAACATAAACTTTCGTGAATCATCAAGCATGAATTCTTCTGGCACAAAATACAGAAAAACACAAGTATACTCTACCCCAGGACCCCCGACGTATTGTAGGATGTCATGAGCATAACGACTAGTTAAAACCTGAGCTGGGCTACCGGGTTGGGCATTTTTGGGGCAGTGAGGATCAAACAGGAAAAATGAGCCATCTGGCTCCACAATAATCGCCCCAGCTAGGGTACTGCAAATGTATATGATAAATTGTGCAACCCCGTTGTAATTTTCATGTAGAATTTCTGCCAGAGAGCGCACAAATGGCGTATCAGTTATCTGTGCTGGAAACAGTACCAGACCAAATATTTCGGGCGAGCGGAAGATATTAGTCTGACCCACGGGTGGATCAAGTGTAATCGCACTCGGCACATCTGTTAATTGAGCCATTTGCCGCCCCCTAAGCACCCCGCTTTGTCTCATTAGACTATCCAGGCGTGTCCCGGCATCCAGTACATCATCCAGTTCTTTTTTGGCAATCAATGGATGCCCTGCCAGAAAACTCTTTAACAGGTACACCACACAATTGCTGACACATTGAATTCCCGCGTATCGGCCAAACTTTGGATTTGATTGATTGCTGGTTGCGGTGCCAATAAT

a score=37560.0
s NC_007605.genome 59122 959 + 171823 GCGGAGGGCCGAGCCTCCACTCCCGCCCCCGGGGGCATTCACATCCATGGTCCTGATTCCGCGCACGGGGCC---------------GGTTCCCCGGGTGCGCTGGCTTTGCCCCCAGTCG---CCGTTAC---TCATCTTCGGCGGTGGGGCGGGGAGGACGCCTTGTCGCCCCCCTTCTGGTCCGGGGTCTTACGCGGCTGGCGGCGGCAGCCGCCGAGAGATAAGGGGGGTACGTGTG------------TGCCTCCGCCTCTCCTCTGTCTGGGCCGCCGCCGCCGCTTGCCCGCCTTGAAGGAGAGGG--GGTAGTC----------CGCGGACTGCGTCTGCGGGGGCAGGAGGTCTCAACCTT----CTGGGCTCGGGCCGCGGTGT-CGATATCCGATGGCCTTTCCCTGTCTTCCTCGTATGCTCCTTCTCCTCCTCCTCCCGGCACGCCCCTGAG---ATCTGCCTCCCCTCCCTCTCCCTCGTCCTGGTCGGAAAAGTCTGAGGAGGAGAAGGAGAATGGGGAGGAGTCCAAAACGGCACGCCACCTGCCGTGGGGCGGTGGTGACAGGTCCCGGCTGGCCCGGCGCTTGCTCGCGTTCCTGCCGTTACCCAGGAGAATGGCCGCGAGTTTTTTGGCGGGGAGGATGCGGAATGGCGGGGGCGTTTGTCCCACGGGTGAGGGGGAATCGTCGGTTAGGGCCGGCACGAGGTGGTGGGTCTGGACCCGGGCCGTGCGAGCAAAGGCGGCGAGAACCGAGGGGCTTCTGGGGGTGACTGTGATCTGTTCCGGATTTAGGTCCATGGCGGGTGTGTATGTTTTAATAGGGGTGGTCTCTGGCGCGGCAGGATGATGGTCGAGGACGTCCACCAGGGCCTTGCAGATGCTCTTGCCTAGATACAGGATGTCGTCCATGCTGAGGGGAGGTGGGGTGTCTGCTCCCCCCTGCGGAAGCCGCCTGGGTGCGGGGATGAAGACAGGTGGTGGGCGGGCGTCTCGCCGG
s NC_006146.genome 52888 953 + 171096 GCGGAGGGCCGAGCCGCCGCCGCCCCCGCCCGGGGGCTCCAGGTCCGTGGTCCTCG---CGCGCCCCGAGCCCCGCATGGTCTGCGTGGCCCCCCGGGGGCGCTGGCCTCGTCCGCCGCCTATCCCGTTACCGTTCATGGCCCTCCGCGGGGCGGGGCGGGCGTCTCGAGGCCCCTCTTCTGGCCCTGGGCCTCACGCGGCTGGCCGCGGCCGCCGCCGAGAGGTAAGGGGGGCGGGTGGGGAACACCGCCACCGCCTCCTCCTCCCCTCCGTCTAGTCCGGAGGCG------GCCCGGCCCGGGGGAGCGCGACGGTTGCCTCCTCTGTGGCGGCGACTGCG---GCGGTGGCCGGAAGGCTCGGCCTCGGCCCCGGCCTTGGGGGGCGGCGTGCCAAACTCCGCGGGCCTTCCCTCTCTTTCTCC----CTCCTCCTCGTCTTCCTCCTT-CACGTCCCAGAGCTCGTCGTCTTCCCACCTCTCCTCCTCTCCCTGGCCGGA---GTCCGAGCCCGAGGAGGC---------------------------CCGGCGGCCGCGGGGCGGCG-TGA--GGTCTTGGCTGGCCCGGCGCTTGCTCGCGTTCCTGCCGTTAGCCAGGAGAATGACCGCGAGTCTCTCGGCCGAGAGGATCCGAAAGGGCGGTGGTGTCTGCCCGGGAGGCGCGGGTGCCTCGTCGGTCAGGGCCGGGGGTGCGGTCTGGCTCTGGCTGCGGGCCGCGCGTGTGAAGGCCGCGAGGACCGAGGGGCTTCTGGGGGTGACGGTGATCTGTTCAGGATTCAGGTCCACGGCGGGCGTATATGTTTTAATAGGGGTGGTCTCCGGGTCGGCAGGAT------CGCGGGGCTCAGTCAGCGCCCGACAGACGCTCTTGCCCAGGTAGAGGATGTCGTCCGCGCCTAGCGGGGGCACGTTCCCCGT---CCTCTCCGGGAGCCGCGGCTGCGCCGGGGCGAAGACGGGCGGCGGGCGGAGGTCTCGCCGG

a score=235478.0
s NC_007605.genome 60081 2789 + 171823 ACTATGGCCTCGGCACGCTCGGCGTCGATGGCGGGTGGCTGGAACAGGCGGGCGAATGTGTAATCCCGGAACCGGTAGGCGACGCTGCGCCTGAGGGCGCCCGTCAGGCTGTATCCCAGCTCCAGGGCGTGCTCCACCCGCTCGTTGAGCTCCTCGAGATCCGGACGCAGGGGCTCGCTGGTGTGGGC--------CCAGAGGGGGTGATCCGCGATGCCCCGGCTCTCCCTGAGGGCCGGCACCAGGAGGCGCCTTCTGAGGGTGGCCGTGTCGGCCGTGGCCAGG-----GCCCACCTGGCGGCGGCGTCCCGGCACACATCCTGGATGCCCTCCACGACGCTCTTTAGCGTCTGGAGGTCCGTGGAGTAGTGGCGGGGGGAGGATGAAACGCTCTTTTCCTTCACCGCTACCACCGCCTCCTCCTCCTCTTCCGTCGCCAGAGGGATCTGCACCCTCCCGGTCTCTGCGTCGTACAGGAGCGGGCGGGAGCACAGCCTCCAAGCTGCCCCCGTCAAGCGCGAGATGTCCTCCGAGAGGGTCTCACCCGAGACCAGAAAGCGGCGGGTGGCCAGGCCCAACGACTCCGCCGTCGTGCTGTATCTCAGGGTGAAGAGGAGTGAAAAGAGGGAGGTGGGCCAGGCAAGCGGTGGTGCTTCCGCCGCCCGC------TCTGAA---GCTGAGATAGTCTCGGAGATGATGCCTGAGACCTCTCGGACGGCGTCCATGATCCTAAGGACTGCGTCGTGGGACGACAGCCCCCAGGGGCCCCCGCCCTCTTCGTCTTCTGC---------ACCCTCGGCTCCTGCGTCCCCGGCCTTGCCTTCCCCCTCT--------------AAGTTGAGGGGGCGCAGTCCGACCGCCT----GG---GGGGACTCCCCAGGCATCGGAGGGGCCCCGTCATAGATCTCCCAGACGGTGGCGTATATGAGCTCGAGAGGACGGCGGGCCC-----GGGTCAGCTCGGGGGAAGGGAGGGCCAGGTCGCTGCCGAAGGAGACCAGCCAGCGCAGGGCGGCCAGAGAGCGGGTTTTGGGCAGCTCGTTGGAGAGGACCCGGCGAAGGGCGGGCCAGATTTGGAACTCGATGAAGGCGGCCGGGAAGAAGGGGCTGTGGACATAGGCCGGATCCGCGCGCGCCGTTTGGCCGGCCCTCAGGGACCGGCAGTATGCCTCGAC----------GTCTG-----TCCGCGGGGCCGCCGCCACCG---------CTGCCGTCCACTGCCTTCTTCCCTG-------------CTCGCCGGGGAGTAGGGGGGGCTTACAGGGGAGGGCCGGAGCCGGGGCCGGGGCCTGCCACAGGCGGCTGTAGCGGACCCATAGCAGAGACCTGAGGAGTTCGGATGAAAGGTCCCCCGCCACCTGCTCATACTCGGCCGCGGGAGGGGGGACGATGAAGATGCGCAGAGGGGTTACGGCGTCCCAAGGGTCCGCCGCCGCCCCCACACCCACAGCCGTCGCGGCGGGGGCGGCGGCGGGCGTAGAGGGGCCGCTGGTGCGCCGGGCTCGTCTGTCCACGGCCTCGGCCTCCGCCCGCAGGTAGGCCGCCCGGGCCACACGGGCGAAGCGGCTCGTGGGGCTCGCGGTGGGCAGCAGTCGGAAAAAGTGCAGGGCAAAGCCCGATAGACTCTCTAGGAGGGCGGCGGTGGCCTCGAGCCACCTCCACCGCGAGCGGGACACCCGGGGCACAGAGGCCAGCATCATGGCGTAGTCCCCCGCCACGGTCTCGTTGAGCCCGGCCGAGAGCAGAACCGTGGCCACCTGCTCGATGGCGGCTGGAGAGAAGGATGCCCGGCTCCCCGCCGCCTCCTGCACACGAGCGGCCAGGGCCTCCATCTCTGCCGCCATCCCGGCCAGGAAGGCCTCGATGACCGAGTCTGGGACGCCGTAAGTCTGGTCCCAGAGCAGGGCCTCGTACACATAGTCGTAAAAGAGGGCCCCTGAGGGCTCCAAAAGCCGGAGCCGGGCGGCGTCAAAGGCCAGGACGGGCACAGCCGCGAC-GGGGGGCGTTTGTCCCCCGCTGGCCTCCGCGTACACGCCCAGGATCTCTACCGCCCGCCGCCGGGCCAGGGGCAGCGAGGCCACCACGCTGGAAAGTGACTCGGGGCGGTGAAAGAGACCACCACCGCTT------------TCTTCACCCTCTCCCCCGCCGGC-------CCCGCCCCCACTGT-----GCTCCACCAGCTCCACGGCCATGGCCTTGATGTCCGCGGCCGTGGGCTG------ACCCTGCCCTGCAGCCG-CCCAGGGGTAGCGGTTGGTCTCCGCGTATACGGTGACCAGCCATCTCCCCAGCGTCGTTTTCGCCGCGTTAAAAGCGTAGAATGACAGCCCCTCCCGCGGGAAGGCGTCCCACCGGGCCAGATAAGTGTCGGCCACCAGCTCTTCCACGAAGGCAAAGGTGGCCGTTGGGCCAGAG---ACCGCGAGCACCTCCCCGCTGCCCTCTTCGATGATGCGCCGGTACGCGGCCGCCAGGGCCCGGGTCTCTGCGATGAGCCGAGAGCCGTCCAGCGGATCGTCGGTGGC--CGGAGAGGCTGTCGTGGG-GGGCAGTGAGGATGCCAGCACGTCCAGGGCCGCCTCCAGATGGCCGAGGCCGAAGCTGCGCCTGGAAAAGGAGGCCGCCCGGAGTAGGTAGTAGGCGTGGTGGCGGAGGACCGCCGCCGGGTAAGCGTGGCCGCTCATGAGGGTGAGAGTATTTAAAAAATCGCGCACCAGCACCGGCTGGGCCAAATCCCCCAGTCCAAAGATCCCCAGCTCCAGAGGCATCAGCGCGCGCAGGCGGGCAGCGGGGTCGTCCCCAGACAGCAGCAACTGACGCGTCACGCGGGCGAGCCC
s NC_006146.genome 53841 2780 + 171096 ACGAGGGCCTCGGCCCGCGCGGCGTCCATAGCGGGGGGCTGGAAGAGTCGGGCGAAGGTGTGGTCCCGGAGGCGGTAGGCGACGCTGGCCCTCAGCGCCCCCGTTAGGGCGTAGCCCAGGTCCAGGGCCCGCTCCACGCGCTCGTTGAGCTCCTCGAGGTCCGGACGCAGGGGCTCACGGGCGTTTTC--------CCACAGGGGGTGGTCTGCGATCCCCCGGCTTTCCCTCAGGGCCGGCACCAGGTGGCGCCTCCGGAGGGCGGCCATGTCGGCGGTGGTCAGG-----GCCCACCTGGCCGCCGCGTCCCGGCACACGTCCTGGACGCCCTCCACCACGCCCTTGAGCGTCTGCAGGTCCGTGGAGTAGTAGCGG------------------------CCCCCCGTGCCCTCCTCCTCGTCCTCCTCTT---TCGCCAGGGGGATCTGCACCTGCCCGGTCTCCGCATCGTACAGGATGGGGCGGGAGCAGAGCCTCTGGGCGGCCCCGGTCAGGCGGGAAACGTCCTCCGAGAGGGTCTCGCCTGAGACCAGGAAGCGACGTGTGGCCAGGCTCAGGCCTTCCGCCGTCGTGCTGTATCTCAGGGTGAAGAGCAGGGAAAAGAGTGAGGTGGGCCAGACGATGGGTGGTGCCGCCTCCTCGCGCCGCTCCTCCGCG---GTGGAGAGGGTCTCGGAGATTACGCCCGAGACCTCGCGAACCGCGTCCATGATCCTCAGGATGGCGTCGTGGGAGGAGACTCCCCAGGGCCCCGCTCCCTCCTCCTCTTCTTCTTCGTTGCCCCTCTCGCCTCCTTCCGTCCCTTCGCCGCCTTCCCCCTCCTCCTCTTGGGGAGAGGACCGCGGGGGCGCCATCCGGCCGCCTCTCTGGTCCGGTGGCTCCCCGGGCATTGGAGGGGCCCCGTCGTAGACCTCCCAGACGGTGGCGTAAATGAGCTCGAGGGGACGGCGGGCCC-----GGGTCAGGGCGGCCGAGGGGAGACTCAGGTCGCTGCCGAAGGAGACCAGCCAGCGCAGGGCCGCCAGGGAGCGCGCCTTGGGCAGCTCGTTGGAGAGGACCCGGCGGAGGGCGGGCCAAATCTGGAACTCGATGAAGGCGGCCGGGAAAAATGGGCTGCGGGCGTAAGCGGGGTCCGCTCGCGCCGTCTGGCCGGCCTTCAGGGACCGGCAGTAGGCCTCGAC----------GTCTG-----CCCGCGGGGCGACCGCCGCCG---------CCGCTA-CCGCTGCCCCCGTACCCGGGGTGGCCGGAAGCCCCCCGGGCGGGATGGGGG------CGGGCGGGATGGGGGTCGGGGCCGGGGCCTGCCACAGGCGGCCGTATCGGACCCACAGCAGGGACCTGAGGAGTTCAGAGGACAGAACCCTGGCCACCTGCTCGTACTCGGCCTCCGGTGGGGGCACGATAAAGATGCGCAGGGGGGTGACCGCGTCCCAGG------------------------CTGCGGCCGCGGCGGG--------CGAGCGT-------------------------CTCCTGTCGGCCGCCTCTGCCTCCGCCCTCAGGTACGTCGCCCGGGCGGCCCGGGCGAAGCGGCTCGTGGGGCTCGCGGTGGGCAGCAGCCGGAAAAAGTGCAGGGCGAAGCCTGACAGGCTCTCGAGTAGGGCCGCGGTCGCCTCCAGCCCCCGCCACCGCGCGCGGGACGCCCGGGGCACCGAGGCCAGCATCACGGCGTAGTCGCCCGCCGCGGCCTCGTTGAGACCCGCCGACAGCAGTACCGTGGCCACCCGCTCGATGGCCGCGGGCGAGAACGAGGCCCGGCCGCCAGCTGCCTCCTGCACGCGAGCGGCCAGGGCCTCCAGCTCCGCCGCCACGCCGGCCAGGAAGGCCTCGATGACCGAGTCCGGGGTGCCGTAGGTCTGGTCCCAGAGCAGGGCCTCGTACACGTAGTCGTAGAAGAGGGCCCCCGAGGGGTGCAGCAGCCGGAGCCAGGCGGCGTTGAAGGCCAGCACGGGCACGGCCGCCGC-CGGGGGGCTCTGCCCGCCGCTGGCCTCCGCGTACACGCCCAAGATCTCCACCGCCCGGCGGCGGGCCAGGGGCAGCGAGGCCACCACGCTGGCCAGCGACTCGGGGCGGTGGAAGAGGCCGTCCCGGCCTGGGTGGGCGGAATGTTCGCCCCCTTCCCCTCCTCCTCCTACTCCCCCTCCCCCTGCTCCCCGCTCCACCAGCTCCACGGCCATGGCCTTGATGTCCGCGGCCGTGGGCTGCTGCGTGCCCCCCGCCATCGCCG-CCCAGGGGTAGCGGTTGGTCTCGGCGTAGACGGTGACCAGCCAGCGTCCCAGAGTCGTTTTTGCCTCGTTAAAAGCGTAGAATGACAGCCCCTCCCGCGGGAAGGCGTCCCACCGGGCCAAGTAGGTGTCGGCCACCAGCTCCTCCACGAAGGCGAAGGTGGCCGCGGGCCCCGAG---ACCGAGAGCACCTCCCCGCGGCCGTCCTTGAGGATGCGCCGATACTCGGCCGCCAGGGCCCGGGTCTCGCGGACGAGCCGCGAGCCGTCCAGCGGGTCCGCGGGGGCGGAGGCGGGGCCGTCCTCGGCGGGGAGCGAGGAGGCCAGGACGTCCAGCGCCGCCTCGAGGTGGCCCAGGCCGTAGCTGCGCCGCGAGAAGGAGGCCGCCCGGAGCAGGTAGTAGGCGTGGTGGCGGAGCACCGCCGCCGGGTAAGCGTGGCCGCTCGCGAGGGTGAGAGTATTTAAAAAATCGCGCACCAGCACCTGCTGGGCCAGATCTCCAAGTCCGAAGATCCCCAGCTCCAGCGGCATCAGCGCGCGCAGTCGGGCCGCGGGGTCGTCGCCGGCCATCAGCAGCTGACGCGTCACGCGGGCCAGGCC
s NC_004367.genome 51461 2507 - 149696 ACGATATCTTCTGCCTGCTCTACAGTAATGTGTGGCGGGAGAAAAAGCCGTTCAAAATACTTATCCCGCAGATGATAAGCAGCACATGTTCCTAGAGCTGCAGTCAGGGCGTGACCTATGGCTACCGCTTTTCGAACGGACTCGTCTATTTCCTCTAGATTGGGTCGAA--GGTTCCCTGCCGTAGGACAAGACTGCCAAATTGGATGAGTTATAACTCCCATAGCTTCTCGAAGTGCGGGGATCA---TTCGTCTTCGAAGAGT-----TGTGAACTGGGAACAAAGTTCTGCCCAGCGGCTAACCGTGTCCCTGCATTTATCTTGTATGGCTCCCAC---------TAGCGTACGCAA---TGTGGA--AATAGTGG------------------------TGCTGAATGA-------------TTTATTGTCGGATGTAATGGGGATCTGGACCTGTTCTGATTCTGCATCGTATTCAATGGGACATGAACACAGAGCGGCTGCAGCACGGGTTATTGGGATGATATCTCTAGTGAGGTCCTGACCAGTGGTGATAAATCTTTGTGTGGATATCTTCATGGTCTCCGACAGGCTACTATATCTGAGTGTAAAGAGAAGGGAAAATAGGCTAGTTGGGAAGGTCACATCCGGTACCACA---------------TCTGAAATCGCCAAGAGGGTTTCA---------------------TGGGCAGCATCCAAAATACGGATGATTGAATCAGGTGAG---------------------------------------------------------CTAACATCTCTGTCGGCATCTTCATCCTCT------------------------------------------------------GAGTGCCCAGGCATGGCTGGAGCGCCATCATAAATTTCCAACATTGCGGCATACATGAGGGCCAGGGGCCTACGTGCCCTTAAGAGTTCAGCTTGG-----------GTTGCGTCTGGACCAAACGCCACCAGCCATCGCAGTAAAGCCTGACTGCGGATTCTAGGAAGCTCATTAGACAATATAAGCCGCAGAGTGGGTATAAGTTGGAATTTGATGAATGCAGCTGGGAAAAATGGACTGATGGCATAAGTGGCATCAGCCTGACTAGTCTGTCCCGCTTTAAGGGAGCGACAGTATTCCTCCACCGCATCTTTGGTCGGATACTTCTGTGTGGTGGCCTCTGTGGGTATGGTTTCTGGGATCAGCTGCCTT-GTACCGG---------------------------TGGGAGGCTTATCTGGAGG----------AGGGCT--CACCTGCCAAAGGCGACTGTACCTGATCCACATGAATGAGCGCATAAGATCAGATGTCATAGCGGCGGCTACTTCCTCATACTCTAAGGTTGGGGGTGATACCAGGAATATCCTAAGTGGGGAAACATTGTTCCACTCGTTGGGT----------------GTGTGGCCATGGCGGG---------AAATGT-----------------------------CCTCAGCTGCCAGAGCTTCAGCCTGTAGGTAAATGGACCTCGCTTCACGAGCGAAGCGGCTGGTTGGACTAGCTGATGTCAGGAGGTCAAAGAAGTGAAGGGCGAATGTTGCAAGTTTTTCCAGTAGTTCTAAGGTTTCCTCTAATCCTACCCACCTACGGCGTGCGCCTTGGGGTGCAGATGATAGGAGTGTTGTGTATGTGCGGGCGGCTTCCTCATTCAAACCGTGAGAAAGTAAAACATCAAGCGTCGCCTCTATAGAGGCGACTGAAAAGTA---CTGCTTGGAAGCTGCTGACTGCACATGCGTAGCCAGGCTTTCAAGTTCCACCAAGGAGCCGGCCAGAAATTTTGTTACAGCGTCTTCCGGAACTCCGTATGATTGATCCCAGAGTAACGCCTCGAAGATGTAGTCATAAAAAAGAACGCCGGTTGGGCCTAGAGTAGATAGGCAGTCCGCGTCGAAGGCCAATACAGGCACAACATCTGCACTTGGTGGTGTTCCACCCGATTG-CTCTGCATAGACACCTACAATTTCGGCCGCTCTACGGCGGGCTATCGGAAGGGAAGCAATAACATTCGATAAAGATTCCGGCCGTCTAAAGAGACGGCCGCCG---------------TGCT---------------------------------------------GCTCCACCAGTTCCCTAGCTAAAACATGAATGTCTTTGACAGT-------------CACCTTGATACCGTTGTCCCACGGGTATCTATTTGTTTCCATATACACTATAGTAAGCCACCGTTCCAACACACTACT---ATTGTTAAAATTAGGAAATTTCAAGCCCTCTCTTGGGAGCGAATCCCAGTAGTTTATATAGGCATCTGCTACCAACTCTTCTACACAAGCGCATGTCGCCACTGGTCCAGGATGCACATTGAGGGGCTCCCGGGA------TTCCATGGCTAGCCGGTATTCAGAAATCACACCTCTTATTCCACTTATCAGTTTGTGGCCATCTAATGGGTCATCAGTGTCGGTGGA---------------AGGCAATGAAGTTTCCAAGACTCGAAGGGCCTCTTCCAGATCTTTTACAGTGAAGCGCTGGTTTGAGAAAGAGGCCGCCCGGAGTAAAAAGTAAACATGGTGCCTTAAAATTGAAGCGATGTAGCCATTGCCGCTCAGGGACAGGAGAGTATTTAAAAATTCTCGTACTAGTGTGTACGAGGTTAAGTCTCCTAGTCCGAATACACCAAATTCTAGAGGCATCAAGGCCCGAATTCTGGCTGTGTGGTCATTGTTGGCGGCCTGTAACTGCGCCGTAACCTTTACCAGTCC

a score=7828.0
s NC_007605.genome 62870 129 + 171823 CCCGTCCACCTCTGCCAGGGGTGGCTGGGCGTCTGCCCCTCCGCTACCGCCGCTGCTGTCACTCTCCATAGCGGACGCCATGAAGGTCCAGGGGTCCGTCGATCGCCGCCGTCTGCAACGCCGAATCGC
s NC_006146.genome 56621 126 + 171096 CCCGTCCACCTCCGTCAGGGGCGGCCGGGCGCCGAGCCCGCCGCCGGTCTCCTCGCCGGCG---TCCATAGTGGCAGCCATGAAGGTCCAGGGGTCCGTCGATCGCCGCCGTCTGCAACGCCGGATCGC

a score=766137.0
s NC_007605.genome 62999 6928 + 171823 [encoded data, 7157 characters]
s NC_006146.genome 56747 6903 + 171096 [encoded data, 7157 characters]
s NC_004367.genome 54268 6753 - 149696 [encoded data, 7157 characters]

a score=2468.0
s NC_007605.genome 69927 86 + 171823 TTCTTGGGGGACTTGAGTTAGCTGTCTTTCCTCTTATTACATTGGGCTAACGGGAGGAAATGA--ACCCAGGGGTG--GCAGTGGATGGG
s NC_006146.genome 63650 86 + 171096 TACTTGGGGG----GAGTGTTCTGACCTTCCCATCATTATCTTGTGTTAACGCGTGGGGATGGGCACCCGGGGGTGATGAACTAGGTGGG

a score=0.0
s NC_007605.genome 70013 343 + 171823 GTCATTTATGGGCAAAACTCACAGGACATGTTTGGGGAGTTAGCATTGGCGTCGGGAAACACAGCTCTGGCAGTTATAACCGCACCAGCTAACAGGACATGTTTGGGGGAGTTGGCATTGGCGTCAGGAGACACGGCTCTGTCAGTTATCACCGTACCATGAGTGCCATGTGTGTCCAGTGCCTAATCACCGTTCCTCATTTTGTGTGCCTCCTCAAATGTTCCAGAAGTCGGCCACAGGGGAGGTGGCTGAATTAGGGCCTTTTCCCTCATTCCCCCATGAGACCCACGTGGCAGGCCTAGGGGCTACATTCGCCTCCCACGTTTCCCTTCGCGTGAGGCAT

a score=4762.0
s NC_007605.genome 70356  97 + 171823 CCGATATGACTGAATTTTCGCAGTCTCTTTTCCCTCTTCCCTTGTTATTCCCATAGAATTACAGTGAGGTTACACAGGTGGAG---ATTCAGTTTAACCA
s NC_006146.genome 64159 100 + 171096 CCAGTGTGGCTGAATTCTCGCGTGCCTCCCCCTTTCTTCTCTCGTTATACCCATAGCATGACAGTAAGGTTACACAGGAGAAGTGGATTAAGGTTAACCA

a score=87063.0
s NC_007605.genome 70453 830 + 171823 TTTATTGATTTAATCCAGGAACAAAAAACAGTCCTAGTGACCCAGTGCCCGGAGAGAGAATGGCCCTGACAAGTCGGCTGCATGATGCACTTCGGCAGTCACGTGTGTGAGTCTCCACGGCCTCTGTCAAAAGGGAGCTTAGCGTGCCAGGGTTGTAATTCTTGATGTAGTGGCCCAGGAATTCAACT-TCATCGTGTCTCCGTCTGCAGTTGGCGTTAATGTAGGCTGGGGCTACTGCCGCATATGCTGCCAAGAGACAGAGGGGCTGCTTCACATATGAGCTGCTCAGGGTCTCCACCACCTTGTTTTGACGGGCCGTGGCACAGGTGATGTAGAAGAGTTGCTTCACAAAGTTGTAGTCTCGCGTGTTAGGAAGGAAGCAGGGTGCCAGCTCTTTGAGCTTGGTCAGGATCACCTTGCTAAGACTCATGGCGCAGGCCAGGAGGATGTCTTCCGCGGGAGCTAGGGGCAGGTCGCCGTGGTAGGTGATCTCCTGGAGCCAAAAGATGGTCTCTTCTAGCATGGCCACCAGGGTGCAGAGCCCCGCGTTCTGGATCGCCTGCATGCGTGCATCCAGCCATGTGTCCTTGTTGGTTGACTTGGTGAAAAACTCACGTAGTGTCTTGTAGCTCCTGCGCAGCTCGTGTC--TGGGTTGCACTTTCTGCCAGGCTCCAATCTCTGGATGGGCGGCCACCGCCAGCATCGACTGTAGGAACGGGTCTTGGATGGGCTCTAGGGTCAGAGAGGCCAGGGGGCTGGGCAAGGTGACAAATGTAATCTTGGAGACAGGCTTAACCAGACTCATGTCAAACCACGGTTTGTTCGGCAGG
s NC_006146.genome 64259 830 + 171096 TTTATTGATTCAATCCAGGAACGAAAAACAGCCCCAGGGATCCCGTGCCCGGGGAGAGGACGGCCCTGACCAGCCGGCCGCAGCAGGCGCTGCGGCAATCGCGGGTGTGAGTCTCCACTGCCTCCGTCAGGAGGGAGCTCAATGTGCCGGGGTTGTAATTCTTGATGTAGTGGCCCAGGAACTCAACC-TCTTCGTATCTCCGTCTGCAGTGAGCGTTGATGTAGGCCGGGGCCACGGCGGCGTACGCTGCCAGGAGACAGAGGGGCTGTTTCACGTACGTGCCGCTCAGGGTCTCCACCACCTTGTTGTGGCGGACCGTGGCACAGGTGATGTAGAAGAGCTGTTTCACAAAGTTGTAGTCTCGGGTGTTGGGCAGGAAGCAGGGGGCCAGCTCCTTGAGCTTTGTCAAGATGACCTTGCTGAGGTTCATGGCGCAGGCCAGGAGGATGTCTTCCGCCGGGGCCAGGGGCACGTCGCCGTGGTAGGTGGTCTCCTGTAGCCAAAAGATTGTCTCCTCCAGCATGGCCACCAGTGTGCAGAGCCCTGCGTTCTGGATGGCCTGCATGCGAGCGTCCAGCCAGGTGTCCTTGTTCGTGGACTTGGTGAAGAACTCGCGTAGTGTTCTGTAGCTCCTGCGCAGCTCGTGTT--TGGGCTGCACCTTCTGCCAGGCTCCAATGTCCGGATGGGCGGCCACGGCCAGCATGGACTGAAGAAAGGGGTCGTGGATGGGCTCCAGGGTTAGAGAAGCCAGAGGGCTCGGCAGTGTGACAAAGGTGATTTTGTCAAGGGGCTTCACCAAGTTCACATCAAACCACGGTTTGTTGGGAAGG
s NC_004367.genome 61517 826 - 149696 TTTATTCGTCAACACCGGGAATAAAGAAAAGTCCAAGGGATGCACTATTGGGGTTAAGGATTGCTCTTGTTGTACTGCTACAAGTAATACTGAGACAGGAGGACGCGTGTTTCTCAACAGCTTGAGTGAGAGCAGAATTCAGGAGACCGGGCGTGAATTTCTCAATGTAACAGCCGAGAATGTCAATTAGCCTTGTGTTTTT-TACACACCTGGCATTAATAAACCCGGGAACAACGACGGCGTAGGCAGCAATGAGTCCAAGTGGCTGTTTTACAAGCGTACTGCATGCCTTTCTAACAGCGTGATGGTGCCTTACTGTTGCGCATGTTAGATAATGCATGTTCTTCACAAAATTGTAGTCAGTCGTGCATGGCAGAAAACAGGGAGCCAGTTCCCTCAACTTCACAAGTAGAGTTTTACATAAGGGCTCAACCGGTGCCAATATAATGTCCTCGGCTGGTGC--GAAATAATCCTCGGTTTCACACAA-CAACTTAAGCCACACAATAATCTCCTCCAACATGCCTGTCAGGGCACATAGTCCTGAATTATAGACAGTCTGCCGGCGAGCGTCTATCCATACCTCTTTGTTAGTAGACTCGCGCATAAACTTTTGCAATTCATCAAAGTTCC--CTTTGATGGTTTTCATCGGCTGCACCTTTTGGTAGATGCTTGTGTCAGGAGATGCTGCCATACTTATGACTGCATGAACAAATGGGCCCGGTACGGGTTCTGGGGTTAGGCTTTCAAGAGGCGATGGTAAAATTACAAAACTAAGTCTGGAAACGGGGGCCATTAGACGCCGATCAAACACAGGTTT-CTGTAAAGG

a score=40841.0
s NC_007605.genome 71283 800 + 171823 GGCCTCTGGCTGCGTTCTTGCCTCGCCTGCTTCCTTGTGCTCCTGCCGGCCCCTCGAGATTCTGACCGGGGACCTCTGGTTGCTCTGTTGCTTCGGGGAGCTCTTGGAGACCTCGGTGCTCTAGGCACCCTGGGGGCCCTTGGGGCTCTGGGCGCTCTTG---CTC-----------------CCGGGGGC---------------------AGGTG----------------------TCGGCGCTTGCCATAACTTTCATCGGTGCAGCCATGGACCTCTCCGCGTCGCCTTTTGTGGCCTCTGGTGTAAGAGGAGTTGCCAGTCTCCTCCTTCTCGTCCTCGTCCCTGCACAGGGGTGAGCGATGCAATGTGACTGTCTTGTCCTGTAGGTCCCACTTCTTTCTGGGAATCACAAACGATGCCGAGGTAGGGGTTATGACCACGCTGGAGGGCCGTGCAGGTAT----------GGCGTGGGCC-----GGAGTTGGATCTTCATCCTCCTCCTCT---GAGGATGAAATCTCTCCATCTGTGGAGTGTTCTTCGCTGCCCTCCATAGGGTCCAGATCGCAGTCTGTGTTGGTGTCTGAGACCGCTTCGAGTTCCAGAATGTGGCTCTCTGCAGAGGGGAGACAAAAGGTGGAGACTGCCTTGAGCACCTCTGTCTCAGGCACCGGATGCCCCCGGCTCCACGGCCCCGGCCACTGGCCGGTGTAGCTTCTTACCTGCGGGATCCTCGTTGGAGGAAAT---GCTGCTAGTTCGGGAGAGTCTCTGAGAAGGAACCATCTTGTCTGTCTCTACGACGGGCTAGCTGGGATGTAGTGCTGTCTTGACTGGCCTCAGCCCTATTTATGATTCTGGAGGCGGGC
s NC_006146.genome 65089 880 + 171096 GGGCGCTGGCCGCTATCTTGCCTCCCCGGCTTCCTCGAGCTCTTGGCAGCGCCTCCGGATGTCGGCCGGGGACCCCTGGGTGTTCTTTCCCGTCTGGGAGCCCTGGGTGCCCTTGGTGCTCTTGGAGCTCTTGGAGCTCTTGGAGCTCTTGGAGCTCTTGGGGCTCTTGGAGCCCTAGGCGCTCTGGGGGCCCTGGGAGCCCGGGCGTCCAGAGGTGACCTCGCTTCCCGTGAACGACGCCGGCGCTTGCCATAACTTTCATCCGTGCGGCTGTGGACCTGGCTGCGCTGCCTCTTGCGGCCTCTCGAGTATGGTGAGGGTCCGGCCTCCTCCCCATCCTCATCATCTCTGCAGAGAGGCGAGCGATGCAGCGTGACTGTCTTGTTCTGTAGGTCCCACTTCTTCCTGGGAATCACAAAGGATGCAGAGGAGGTGGGCACGACCACGCTGGCGGGCTGTGCGGGTGCTGAGCTGGCCGGCGTGGGGCTGGTTGGTGTGGGGTCTTCATCCTCCTCCTCCTCAGAGGAAGAGATCTCCCCGTCCGTGGAGTCTACCTCACCCTCCTCCATGGGGTCCATTTCGCAGTCTGACGCGGCGTCAGAGACCTCTTCGAGTTCCAGGATGCGGCTCTCTGGTG-GGAGAGAGAAAAGG-GGAGACGGCTTTGAGCACTC--GTCTCAGGCACCGGGCACCCCCGGCTCCCCGGCCCCGGTCACTGGACGGTGCGGCCTCTTACCTGCGGCGGTCTCGTTAGAGGAGGCCTCGCTGCTAGTCTGAGAGAGATTCTGTGAGGGAATCATCGTGTCTGTGTCTCTGATGGGCCAGTGGTGATGTGGTGCCGTCCCAGTCGGACTCAGCCCTATTTATCATTCTGTGGGTGGGC

a score=360787.0
s NC_007605.genome 72083 3079 + 171823 ACGCTGATGGAGAAATGGGCGGTCGGTTGATTGGCCCCACAGCGACCGGCGAAGCACTGACTCATGAAGGTGACCGTGATGGCCTGTGATGTGTAGTAGAGTACCAGAAACACCCTCACATTCTTGGAGCTGGCCCTGTGGGTATGC------CTCAGGCACGCAAAGTTCCTGCCCCGGGCATGGCACACCTGAACTAAGTTTGGCCCGGTTTGCTCAAACGTGACATGGAGAAACTGGGGGAATTTGTCTTCTGGCACAGCTGTTGCCAGGGTGCTCATGAGCGAGGGCCAGATGCAGGAGCTGACCCAGGCGACGAGATCCAGGCCCAGATGTCCCTCTATCATGGCGCAGACATTCTCCACGGTGGGGGGCAGGGTCTCGCGGGTCCTCTGGATTAGATAGTCACGCCCATCATCCGCGATGTGGTAGCAGAAGGTTTTGGGGGCCGGCCAGCCCACGTGCAGTGAGTGATGTAAGAGGTTTTGAATGTTGAGGGCATTCTTAACATAGCTGTGCTTGTCTTCCTCTTCCGGATGACAGACAAAGAGGCGCAGCTGCCGGCTAAGACCACCGCCCCTGTCCACCTTGTAGGTATGCGGCAGCCGGATGCACCGCCCGGCGTGATACACGCCGCTGTCAAAAAGCGGGGCCCCAATCTCTTTGATCTTGTGACGCATGCGGCGCAGGCAGGCCGTTAGGCCCATGAGCTTCTGCAGCACAGACACAAACCCTTGTACTGCGCTTGTTCCCACAATAGCATGGCCTCTAGGTAGGGGGGTGATGACGCGAAAGCCCAGTTTTCCCGTGCATATGCAAAAGGGGAGCACATCTTCCATATTATCCGGGTCGGCGGGTGGACAAGCTGATTTGAAAAAATAGACTGGGTGGGCCCTGGACACTGGACCCAGGCGGCGCATGAGGCGCAGTACCTCACGCCGCACGGTCCGGCACAGGTCATAGATTTCCTCCAGCGACCAGGGGGCCCCCTTGATCTTTAGATCCAGGTCCAAGACCAGGTTGCAGACCGGAAGCCGGGGATTAAAGTATTCATGCCGGGAGACAAAGAGCTGCTCGCTCAGGCTGTTCTGTGAATAGTACACTGGGGTGTAGGAGAGGGCCCTGGTGAGACACGTGTCTGGGAGGCGGCAGTTGGTCGGGGTGGAGACG-ACCTCCGCCAGGTGGGATGAGAAGGGGTCAGCGGCTGTCATTACAAAGTAGTGCCTGTCTGCAAAATGGCAGAGGAAGACCGG-TAGCCGCTGCACCCTTCGAAGGACGGTGGGTGGGAGGAATTGTTCCTT---------------GGGATTCCACTGGCCCCGGCAGGTGGCCTGGCCGGCCAAGCATAGAAACCCTTGAAGCGTGGGGGGGTATGTGGGACCCTCATCCGCGTGCCAGCGCGCGAGCTCCACCAGCTCCCGGGCCACGTCCACACTGAGCCCGGCCCAGGCCCGCATGAGTCCGTCATCGGGGTCGGGGTCCCACGTGTA-----TGGGGCCG-GGGGCTCCATGCGGATTTTCAGCTGCTGGACACGCACATGCTCAGCCAGGTAAGTCTCCCGGGTGAAGTAGGTGCGCATGTGCTCCGCAAAGCCCCTGTCCAGGAGCGAGG---GGAGCACGACGCCCCCCGAAGGCAGACACCCAATTTCTCCCATGCTCGTTAACTGAGAGTATCGCTTAAAGGTTCCCTCGTTGAAGCACTGTGCGTGGGCCAAATAGACGTAGCGCACGAGATCGG---CCGAGGCCAGGGGAAGGCGCCCCCTGTAGGCGTCTATCGTCCTTGCCACAGCGCGGATCTCTCGCGAGTCCCGCCGCAGTTTCTCGTGTGCAAAGTGGGCAAAAGCCTCGGTCTGCTCCGCCCATGCCGAGGAGCCAAAGACCTCCCCCAGCTCGGCCAGGGACGTGACGGCGGCCAGGCTCTGACC-AGACTCGGAAG--TAAATAGCTCCGTGAGGTGCGCCAGGGTCTCAA------TCGTACAAGGAATGCCCCAAAAATAGTAAGCAGCCGTGACTAGCACGAACTGGGCCTCGTGGGAGCCAAAGGTGCTAATGAACCACCTGGCCGAGATGTTAACGCGGTAGATGCGGCGCAGACAGCCCACGATCTTGGGACGCAGCCA--------CGCCACGCGGCCTCTGGCATCCCCCTGTGGCTGTTTCTTAGCGCTCAGTGTGAGCAGTTCCACGAGGGGCGTGAGCGAGCGCAGGGCCCCCGCGCGATCTAGGTAGGTGGATAGACGGT-CCGCGGTGAGCGGCGTGAGGCCGCGCAGGAAGGGGAAGGCCTCCTCCGCCGGCAGGTGCAGCGTCAGAACCAGGCCGCAGCGGCTCTGTGA---GGTCAGCCGCTTCTTGGGCAGGTGAAGCTGCAG---------TTCCACGAGA-GAACCCGCCACGTGGTGGAGGGGCGAGGCGTTGTGGCACAAACAAAACAGGCGGAAGCCCTCGTCAGGCCGCGAGAGGATGGCATCGAGGATGGCCTCCGCAATGTCAGTGTTTGAGGCCACAAGGGCCTTGATGACGACGGGGGCGGACATTATTTAAGACCGGGAG-GCCCCAACGGCGGGCTAAACAGAACG--ATGGCCTTCTATCTCCCAGACTGGTCGTGCTGCGGGCTCTGGCTCTTTGGCCGGCCCAGGAATAGATACAGCCAGCTCCCTGAGGAGCCGGAGACCTTTGAGTGCCCGGACCGCTGGCGAGCCGAGATAGATCTGGGCCTGCCCCCTGGTGTGCAGGTGGGAGATTTGCTAAGAAATGAGCAGACGATGGGCTCACTGAGACAGGTTTATTTGCTCGCTGTTCAAGCCAATAGCATCACGGATCACCTGAAGCGCTTTGACGCCGTCCGCGTCCCTGAGAGCTGTCGTGGGGTGGTGGAGGCCCAGGTGGCCAAGCTTGAGGCCGTGCGCTCAGTCATCTGGAATACCATGATCTCTCTGGCTGTAAGCGGCATCGAGATGGACGAGAATGGGCTCAAGGCCCTGCTGGACAAACAGGCTGGCGACAGCCTGGCCCTGATGGAGATGGAGAAGGTGGCCACGGCGCTCAAGATGGACGAGACCGGTGCCTGGGCGCAAGAGATCTCGGCCGTTGTCTCATCGGTGAC
s NC_006146.genome 65969 3079 + 171096 ACGCTGATGGAGAAATGGGCGGTCGGTTGATTTGCCCCACAGCGACCGGCGAAGCACTGACTCATAAAGGTGACCGTGATGGCCTGGGGCGTGTAATACAGGACCAGAAACACCCTCACATTCTTGGAGCTGGTCCTGTGGTTATGC------CTCAGGCACGCAAAGTTCCTGCCCCGGCCATGGCACACCTGAACTAAATTTGGCCCCGTTTGCTCAAACGTGACATGGAGGAACTGGGGGAATTTGTCCTCGGGCACAGCTGTTGCCAGGGTGCTCATGACCGAGGGCCAGACGCAGGAGCTGACCCAGGCGACGAGATCCAGGCCCAGCTGCCCCTCTATCGCGGCGCAGGCATTCTCCACGGTGGGGGGCAGGGTCTCGCGGGTCCTCCTGATCAGATAGTCGCGGCCATCGTCGGAGACGTGGTAGCAGAAGGTTTTGGGAGCTGGCCAGCCCACGTGCAGGGAGTGATGCAGCAGGTTTTGAATGTTGAGGGCGTTCTCCACATAGCTGCGCTTGTCCTCCTCTTCCGGGTGACAGACAAAGAGCCGCAGCTGCCTGCCGAGGGCGCCGCCCCTGTCCACCTTGTAGGTATGCGGCAGCCGGATGCACCGGCCGGCGTGATACACGCCGCTGTCAAACAGGGGGGCCCCGATGTCTTTGATCTTGTGGCGCAGGCGGCGCAGGCAGGCCGTGAGACCCATAAGTTTCTGAAGCACGCAGACGAACCCCTGCACAGCGCTCGTTCCCACGATAGCATGGCCTCTGGGTAGGGGGGTGATGACCCGGAAGCCCAGCTTCCCCGTGCAGATGCAGAAGGGGAGCACGTCTTCCATGTTCTCGGAGTCAGGGGGTGGGCATGCCGATTTGAAAAAATAGACGGGGTGCGACCTGGACACCGGGCCCAGGCGGCGCATGAGGCGGAGTAACTCGCGCCTCACCGTCAGGCAGAGGTCATAGATCTCCTCCAGCGTCCAGGGCGCCCCCCGGGTCTTGAGATCCAGATCCAGGACCAGGTTGCAGACCGGGAGCCTGGGATTGAAGTACTCGTGCCGGGAGACAAAGAGCTGCTCGCCCAGGCTGTTCTGGGAAAAGTAGGATGGGGTGTAGGAGATGGCCCGGGTGAGCCGCGTGTCCGGGAGCCGACAGTCGGCCGGGACGGAGACC-ACCTCTGCCAGACGGGCCGAGAAGGGGTCGGCGGCCACCATCACAAAGTATCGCCTGTCCGCGAAATGGCAGAGGAAGACCGG-GAGCCGCTGGCCGCTCCTGAGCGCGGCGTCCGGGAGGAACTGCTCCTT---------------GGGATTCCACTGGCCGTGGCCGGTCGCCTGGCCGGCCAGGCACAGGAAGCCACGGAGGCTGGGGGGATAGGCGGGCCCCTCCTCCGCGTGCCAGCTTGCGAGCTCCGCCAGCTCCCGGGCCACGTCCGCGCTGAGCCCGGCCCAGGCCCGGGCGAGCCCATCCTCGGGGTCCGGGTCCCACGAGTA-----CGGGGAGG-GGGGCTCGGTGCGGATGTTCAGCTTCTGGACGCGCACGTGCTCGGACAGGTAAGTCTCGCGGGTGAAGTAGGTGCGCATGTGCTCCGCGAAGCCCCGGTCCAGGAGCGAGG---GGAGCACGACGCCCCCCACTGGCAGGCGCCCTATCTCCCCCACGCTCGTTATCCGAGAGTATCGCTTGAAGGTAGCCTCGTTGAAACACTGCGCGTGGGCCAGATAGACGTAGCGCACGAGGTCGG---CCGAGGCCAGTGGAAGGCGCCCCCTGTAGGCATCTATCGTCCTAGCCACCGCGCGGATCTCGCGCGAGTCCCGCCGCAGCTTTTCGCGCGCGAAGCGGGCAAAGGCCTCGGTCCGCTCCGCCCAGACGGAGGAGCCAAAGACCTCCCCCAGCTCGGCCAGGGACGTGACGGCGGCCAGGCTCTGCCC-CGCCTCGGAAG--TAAACAGCTCCGTGAGGTGCGTCAGCGTCTCAA------TCGTGCAAGGAATGCCCCAAAAATAGTAAGCGGCCGAGACCAGCACGAACTGGGCCTCGTGGGAGCCGAAGGTGCTCAGGAACCACCGGGCAGAGACGTTGACCCTATAGATGCTGCGCAGGCAGCCCACGATCTTGGGGCGCAGCCA--------CGCCACACGGCCCCTGGCGTCCCCCTGCGGCTGCTTCTTGGCGCTCAGTGTGAGCAGCTCCACGAGCGGCGCGAGCAAGCGCAGAGCCCCCGCGCGATCCAGGTGGGCGGCCAGCCGGT-CCGCGGTGAGCGGCGCCACGCCACGCAGGAAAGGGGCTGCCTCCTCCCCGGGCAGGCGCAGCGTCAGGACGCGGGCGCAGCGGCTCCGGGA---GGTCAGACGCTTCTTGGGGAGGTGAAGCTGCAG---------TTCCACGAGA-GATCCCGCCACGCGGTGGAGGGGCGGGGCGTTGTGACATAAACAAAACAGGCGGAAGCCCTCCTCGGGCCGCGAGAGGATGGCGTCGAGGACGGCCTCCGCCGTGTCAGTGTTGGTGGCAACCAGGGCCTTGATGACGACGGGGGTGGACATTATTTAAGACGGGGAGCGCGCCTATGG-GGGGTAAACAGAACG--ATGGCCTTCTACCTCCCCGACTGGACCTGCTGCGGGCTATGGCTCTTTGGCCGCCCCAGGGACAGATACCACCAGCTCCCCGAGGACCCGGAGACCTTTGAGTGCCCGGACCGCTGGCGAGCCGAGATCGATCTGGGCCTGCCCCCGGGCGTGCAGGTGGGCGATCTGCTGAGAAATGAGCAGACGATGGGCTCGCTGAGACAGGTTTATCTGCTCGCCGTTCAAGCCAATAGCATCACGGATCACCTGAAGCGCTTTGACGCCGTCCGCGTCCCCGAGAGCTGTCGCGGGGTGGTGGAGGCCCAGGTGGCCAAGCTTCAGGCGGTGCGCTCTGTCATCTGGAACACCATGATCTCTCTGGCCGTGAGCGGCATCGAGATGGACGAGAGCGGGCTCAAGGCCCTGCTGGACAAGCAGGCTGGCGACAGCCTGGCCCTGATGGAGATGGAGAAGGTGGCCACCGCGCTCAAAATGGACGAGACCGGGGCCTGGGCCCAGGAGATCTCCGCCGTTGTCTCATCGGTCAC
s NC_004367.genome 63008 3068 - 149696 ACATTAGTTGAAAAATGGGCGACTGGGCGATTTGAGCCGCACCTGCCAGAAAAACACTGACTCATGAAGGTCACAGTGGTTACCCCGGAGGTGTGGTGCAACACCAGAAATATGCGCACACT------GCTGGCTATGTTGCGATGCTGGTATCTCAGACATTTGAAGTTTTTTCCGCGGGGGTGGCATACCCGGACTATATTGGCCGCTGTTTGTTCGAATGTTACACGCTGAAATTGGGCCAACCTATTGTCTTGGATGGTTGACGTCAGGGTCGTGTATATTGTGGGCCATACCTTCGCTTCCACCCATTGGGACAGTGTTAGGCCCGTACTGGTTTCTATTTTTTCTGCAAAATTCAAGGAAGGGGCTGGAAGGGCATCTTTGACTTTCTTTGTGATAAAGCCTTGCCCTTGGTCTGAAATATGGTAACAAAAGTGAATTGGCCGCGGCCACCCAACGTGCAATGAGTGATGTAGTAGATTTTGTACGTTCAAAGCATTTTCTACATAATACCTCTTGTCATTTACCTTGGGATGGCAGACGAAAAGGCGAAGCTGCCTTGTTAGAACACCACTCTTGTCAACCTTATATGTGTGGGGAAGTCTTATGCATCGTCCTTGGCTGTATATGCCAGCATCAAAAAATGATTCCATGCTGGAT---AGTTTATGCTTCAACTTCCGCACGCGTGGTGATAGACTGACCAGTTTGCTTAAAACTGCAACAAGACCCTGCATCCCTCGCGTTCCAATAATTGAATAACCTCTAGGTAGGGGTGTAATAACCCGCAAGCCTAGTTTCTCGCGGCAAATGCAGAATGGCAGGATGTCTGCCATATTTTCACAATCTGGAGGTGGGCAGGCTGATTTGAAAAAGTAGACGGGGTGGTCTGATTCTACTGGACCTATACGCGAAAGCATTTGCAGTGAAGCGTGGCGTACAGCGAGGCATAACTGGTAGATATCTGTAACACTCCA---CATTTCCACAATCTTCACATCCATGTCCAATACCAAATTACAGACCGGGAGCCTATGGTTAAAGTACTCATGACGAGAGACCAAAGACTGCTCCGCCAGTGTATTCTGTGTATAGTAGTAAGGCTCATAGGTCAGGGATCGAGTTAGCATAATGTCAGGTATGTTGCAGTTTTCTGGTATGGCGATGTGTTTTCTCCAAAACTGACTA-ATGTTGTCAGCAGCTACTGTCATGAAGTAATGATGTTCTAAAAATTGACATCTAAATACCGGCCAGCAGC-------------GTGTTGTCGTTGTTAGGGTTTTAACCTCTACAAGGTCATCACGTGGGTCCGGCACTCCGGGGCTAGTTTTCTGGGAGGCTAAACTGAGCATCCCGTGGAGATTGGGGCCATGGTGTGGTGTTTCAC---GGTTCCAGTTGGCTAGTTCCATTAAGATCGCCATTACATCCCTACTGAGTCCAGACCAGGCAACAAGTAGCCCGTCGCATGGGTCTGTATCCCATGTGTAAACACTGGGGTGGCAGAGCTT------GACTTTAAGGAGCTTGATTTTAACGTGTTTTTCAAGGTAGCTTTTTTTGTTAAAGTAAGTCCTCATGTATTCACTGAATTTTGAATCTAACATTCTGGTAAGTAGCCCATTAACCCCCAACGCTGAGCTC---AAGTGTGGTGCGCTCGTTAAGACAGAATAGCGTTCAAAAGTGACTCGGTTAAAGCATTGAGCATGTGCAGTGTAAACATACTCTACAAGGCCAGTATCCGAA---AGTGGCAGTTGACCGCGGTACTTATTGATCATGGCTCTTACCCGGCACATTTCCATGGTATCCTTATTGAGCTTTTTTCTTGTAAACGCGGGAAAGTAATCAAGATCCCTAGTCCATTGAGATGTGCCAAAGATCTGGCTAAGTTCCGCGCATGATGTGACCGCCGCTAGACTCTGACCTTGATCCGGGTGGACAAAGAGTTCTGTTAACTGTATTAGTGTTTCCACAGAGGCCTCGCTAGGA------TGAAAATAATAAGCAGTAGTAACCAGGACAAAGGTAGCTTCCCTGCTGCCGAATGTGCTTATGAACCAGCGTGCGGAAGCATTAGTGCGATACATCCGCCTGAGAGCGGATGTAATTTTTGCTCTAAGCCAACAAATGGCGCCGTACAG--------GTCACGTTGGGGATTTTTGTTGCCG---AGTGTCAAAAGTTCTACCAGGGGCTTAAGGGACCTAAGGGCTTTTGTCCTATCGAGGTA-GCGACGGGCTGATGCCGTGTCCATGGGCTTTGTGCCACGTAGAAAGAGCAGGGCTTCTTGGCGCGGTAGCCTTAGTGGGAGAATCTCGCTGCATCG---CTGGGACTTGGTCACTCTTTTGGTCGGCAGACAAAGCCGGAGGCTAACCTCTTCAGGGAGATGAGACTGTCTTTCTATAGA-------GGCATCATGACAGATACAAAATAATGTCGCGCAGTCATTGGGGCGCGAGAGGATAATATCCATCACAACTTCCGCCGTATCCGCATTCGTGCTGAATAGCGCACGGATGACTTCACCGGTTGCCATTATTTAAGAAGTCTAA-ACGTGTATAG-AGCTAGCAAATAACGATATGGCATCCGGATTC---------ACCTGCTGCGGGTTGTGGCTCTTTGGAAGACACAACAACTCGTACAGTAGGATCATAGACAATGTTGAGGATTTTGAGTGCCCTGACCGATGGCGGGCAGAAATAGACCTCGGATTACCACCTGGTGTGCAGATAGGTGACCTTCTTCGCAACAACCAGAGTATGAACACGTTACGGCAAGTTTATTTGCTAGCTGTGCAATCCAACAGCATCACCGATCATCTAAACAGGTTTGATGCAGTGAGCGTGCCGGAGAGTTGTAAGGGGGTAGTGAATGCTCAAATCACTAAGCTGCAGGCTGTGAGGTCTGTTATATGGAACATGATGATCTCATTGGCTGTGAGTGGTCTGGCCGTCGAGGAGGAAGGATTCAAGGCTCTCCTAGACAAGCAGGCTGGAGATAGTCTGGCACTTATGGAAATGGAAAAGATGGCTACGGCACTAAAGACGGACGATACAGGCGCTTGGGCCCAAGAATTGTCCACATTTTTGGCATCTATGGC

a score=9124.0
s NC_007605.genome 75162 173 + 171823 CGCCCCCTCAGCCTCGGCCCCTTTCATCAACTCCGCCTTTGAGCCCGAGGTGCCCACCCCCGTCCTTGCACCGCCTCCCGTGGTGCGGCAGCCGGAGCACTCTGGGCCCACGGAGCTCG--------------CGTTAACGTAGCAACCAGACTCCACACCAAATAAACATTTTATTGGTAAAACAA
s NC_006146.genome 69048 187 + 171096 CGCCCCCGCGGCCACCGGCGCATTTCTAAACCCCACCCACGAGTCTGAGATTCCCGCCACCGTCCTCGCCCCGCCACCCGTGGTGCGGCAGCCCGAGCGCTCGGGCCCCGCCGAACTCGTCGTCGAGCCCTCTCGTTAACGTAGCTACCAAACGCAACACCTAATAAACATTTTATTGTTGAAACAA

a score=174114.0
s NC_007605.genome 75335 1946 + 171823 GGGATATGAAGGTGTCATTGACCCGAGGATCCAAACCCCCTCCCCTGTCT---CCCCTCGAGCGCCTCGCTCAGCCCACTATCACCCATGGCCAGGCTCGGCACCTCCTCGAAGGTGCAGCTGGCCCACCTAAAGAGAGATCTGGGGCCAAGGACCCCCGCGTCACTGTGGGGGCTGTAGAAGGAGGTGAGGTGGTGCTTGTGAAGGTAAACAAGCTGACAGAAGCGCCGGTACTTGTTAAGGAACACGGTCTGGTCACTAAAGTTGGTCAGGCTGACGTCCACCCCACCCCGGCGCCACCTGCAGGGCTTCACTAGAATACCCTGCATGGCCAGGCCCGACCTGCCAAAGATTGTCGGCCTGTGGTGAGGGATAGAAGGGGGGGGCACGGTGAGTGTCACTGAGACGGTCTGATGGGGGAAGAGGGCCAGGTCCTTTGGCAAAGAGACGTCCAGGCCCACGTCCCCGGGGTACTGGGGGTGGTTGATGGGACCCTTGTCCTCCTC-----CATCTG-GGGGGTGGCATATCTGAAGGCAGCCAGGTGGATTTTGAGCTCCGATGGACGCAGCGTGGAGTTGTAGCGCCGCTGATTCTGGAGGATTAGCCGGAGTTCCCCCGTGTAGCCGGGATCGATGATGCCAACATGAGACGTGACCGGACGGGAGGTGCTGCCCCACAGCATGAGCCCATGACCCTCGGGTGGGCGGGCATAGAGGCCTAGGTCCACAGTTGTGGTCTTCATCGGGCGCAGCAGGATGGTGGTCTTGTTGACCAAGGTGAGCCGCCCTACACTAGCCTGCTGGAGCAACAGCTTGTCATTCTGGAAGGCGTAGCGTATGTGTGGACAGGCCTCCATGGTGATGATCT-AACAGACAGGGACGGCGGC-----------GCTATATATAAGAGCCCAAGACCCGGCTCT-----CTTTACTGCGAAATGGGG--AAGGTCCTAAGAAAGCCGTTTGCAAAGGC------TGTGCCACTGCTCTTCCTCGCCGCCA-------------CCTGGCTTCTGACCGGGGTGCTGCCGGCCGGCGCTTCCAG-TCCCACAAACGCGGCGGCGGCTTCCCTGACTGAAGCCCAGGACCAG--TTCTACTCCTACACATGTAATGCGGACACATTCTCGCCTTCTTTGACCAGCTTTGCCTCCATCTGGGCACTTCTGACGCTTGTCTTAGTCATTATAGCCTCAGCCATCTACCTGATGTACGTCTGCTTTAACAAGTTTGTGAACACGCTGCTGACGGATTAGAT----GGGGATATTTAAAAGGGGCAGCAATCTCGGCTGTTTGTACTTCTTCTCTG--CTCGTTAAA-----CCAATAGCATGTCAGCTCCACGCAAAGTCAGATTGCCTTCTGTTAAGG---CTGTTGACATGAGCATGGAAGACATGGCCGCCCGCCTGGCTCGCCTGGAGTCTGAGAATAAGGCTCTGAAGCAACAGGTCCTCAGAGGGGGTGCCTGTGCCTCGTCTACCTCTGTTCCTTCTGCTCCAGTGCCTCC-------------GCCTGAGCCG--CTTACAGCTCGACAGCGAGAGGTAATGATTACGCAGGCCACGGGCCGTTTGGCGTCTCAGGCTATGAAGAAGATTGAAGACAAGGTTCGGAAATCTGTTGACGGTGTAACTACCCGCAATGAAATGGAAAATATATTGCAAAATCTGACCCTCCGCATTCAAGTATCTATG-TTGGGTGCAAAAGGCCAACCCAGCCCTGGTGAGGGAACACGACCACGAGAATCAAACGACCCCAACGCCACCCGACGTGC------CCGCTCCCGCTCCCGGGGACGTG---AAGCAAAGAAAGTGCAAATTTCTGATTAATAAATTTTTATTGACTTTATACATAGGTCTCGG---CGTCATCATATGGTGGGGTGGTGTAGGTAT---------GGGATGTAGACAAGTTACGCCTAAAGGCGCAGTCCGCCATGACCAGCAGCAGCAGAAGGGTCAGCACAGCCAGAGAGGCCCACTGCAGTACTA
s NC_006146.genome 69235 1957 + 171096 GGGATACGAGGGTGTCATTGTCCCGAGGAGCCAAACCCCCGCTGCTCTCTCCCCCCCTCTAGCGCCGCCCGTAGCCCGTTTCCCCCCAGGGCCAGGTCCGGGTCCTCCTCGAAGATGCAGCTGGCCCACCTAAAGAGGGTTCTGGGGCCCAGTACTCTCGCGTCGCTGTGGGGACTGTAGAAGGAGGTCAGGTGGTGTTTGTGGAGGTAGACGAGCTGGCAGAAGCGCCGGTACTTGTTGAGGAACACGGTCTGCTCGCCAAAGTTGGTCAGGCTGACGCTGACCCCACCTCTGCGCCACCTGCACGGCTTAACCAGGATGCCCTGCATGGCCAGGCCCGACCTGCCAAAGATCGTCGGCCTGTGGTGAGGAATGGGGGGTGGGGGCATTGACAGGGTCACGGAGACCGTCTGGTGGGGGAAGATGGCCAGGTCCTGGGGCAGCGAGACGTCCAGGCCCACGTCCCCGGGGTACTGGGGGCGGCTAATGGGCCCGCGGTCCTCCTC-----CAGCTG-GGGGGTGGCATATCTGAAGGCTGCCAGGTGGATCTTCAGCTCCGAGGGGCGCAGCGTGGAGTTGTAGCGGCGTTGGTTCTGAAGGATGAGCCTGAGTTCCCCCGTGTAGCCGGGATCGATGATGCCCACGTGGGACGTGATGGGCCGCGAAGTGCTGCCCCACAGCATGAGCCCGTGGCCCTCGGGAGGTCGGGCGTAGAGGCCCAGGTCCACGGCCGTGGTCCTCATCGGGCGCAGCAGGATGGTGGTTTTGTTGACCAGGGTGAGCCGCCCCGCGCTGGCCTGCTGGAAGAGGAGCTTGTCATTCTGGAAGGCGTAGCGTATGCGTGGACTGGCCTCCATGGTGATGAGCTAAACAGAGAGGGACGGCCGT-----------GCTATATATAAGAGCCTCAGACCCGACCGT-----CCGCACTGAGAAATGGGG--AAGGACCGAGGGAACCCGTTTGCTAAGGC------TGTGCCACTGATCTTTGCCGCCTTCG-------------CCTGGCTCCTGGCCGGGGCGCTGGTGGCCGGCGAGGCCGG-TCCCACACCCACCCCCGCAGCGCCGGGTGCCGAGGGCCGCGAGCGT--TTCTACTCCTACCAGTGTAACGCGGACACGTTCTCTCCCTCCCTGACCAGCTTCGCGTCCATCTGGGCGCTTCTGACGCTGGTCTTAGTCATTGTGGCCTCCGCCATCTACCTAATGTACGTCTGCTTTAACAAGTTTGTGAATACGCTGCTGACTGATTAGAC---GGGGGATATTTAAAAGGGCTCGCATTCTTGGCCGCCTGTACTTCTTCTCTG--CTCGTTAAA-----CCAATAGCATGTCGGCCCCTCGCAAGACAAGAGTGCCTTCTGGCAAGGGGATGGCTGAAATGAGCGTGGAGGACATGGCTGCCCGGCTGGCTCGTCTTGAGTCTGAGAATAAGGCCCTGAAGCAGCAGGTGCGCAGGGGGGGAACCTGTGCCTCCACGGCCTCTGCTGCCTCCGCCCCATTGCCCCC-------------ACCAGAGCCG--CTCACACCCCGCCAGCGGGAGGTGATGATCACTCAGGCCACGGGCCGCCTGGTGTCTCTGGCGATGCAAAAGATCGAAGACAAGGTGCGGAAAGCCGTGGACGGCGTGAATACCCGCCCGGAGATGGAAGACATTCTGAAAAATCTGACCGTTCGCCTTCAAGTCTCTATG-TCTGGGGCCAAGGGCCAAGCGGGCCCGAGTGAGGGAACACGACCGCGAGAAGCCGCGGACCCCGCCGCCTCCCGACGTGC------CCGCTCCCGATCCCGAGGACGCG---AAGTCAAGAAAGTGCAAATTTCTGATTAATAAATCTTTATTGACTCTAAACAGCGGTTTCAAATTCATCATCATATGGGGGGTGGGTGTAGGTAT---------GGATTCTGGACGAGCTGCGTCGGAAGGCACAGTCCGATATGACCAGTAACAGCAGAAGAGTCAGTACACCCAGAGAGGCCCATTGCAGCACTA
s NC_004367.genome 66462 1953 - 149696 GAGGCACCCAGGCATCATTCACCGGAGGAACCAAAGCCTTTGTTACTTCT-ATCTCTGCCAGTCCGTGGCGCAGATTTTTGCAA--------TAAATCGGCTTCCTCCCTAAAGATACATTTAGCCCAAGTAAACAGAAACTGAGACCCCAGGCAGCGGGTATCACACAATGGATTAAAAAATGATGTAAGATGTTCCTTGTGTAGATAGACTAGTTGACAGCAACGGTCTCCTTCATTCAGAAAAACTGTTTCTGCGCTATAATTAGTAATACAGACATCTGCTCCGTCCCTGCGCCACTTGGTCACTCTAACAATTAACCCCTTACAGGCGAGACCTGACCTGCCAAATATCATGGATCTGAAATGGGGAATCTTAGGAGGTGATCCAGACAGCCGTATCGTAATTGTTTGTTGCGGGAAGATGCCAACAAAACTCGGACATGAGACATCAAGTCCCACGTCCTTTTCATACTGGGGCTGATTAATAA------TGCTCCCCTTAGGCACATCTGTTGGTGTGTGGTACTTGAAAGCCGCTAGGTGGACGGTCAGTTCACCGGGCCTCAAGGTGGAATTAACGCTGCGTTTGTTGTGTAAGATGAGTTTGAGCATCCCAGTATAGCCAGGATCAATAATTCCGGTGTGGGGTGTTACGGGTCTGGTTGTAACACCCCACAAAACTAACCCGTGGTTTTCCGGAGGCTTGGCATAGAGACCCAAGTCTAGAATACATGTCTTGAATGGTCTCACCAATATTGCAGTTTTGTTAACTAACGTAAGGCGAGTTG---TGGCTGGCAGAATCAAGAACTTGTCACTTGAAAACGCATAGTTAACGCAAGGTTGCGCTGACATGATTACG---T-CAAGGACACGATCTGTGGCTGAAACTAGGTGGCATATATTAGAG----GGACCCGGTCGCATAAATCTTACCAAGCCTTGAAGTTAAGGACTAAGAATGGCGACTCACTGGTGCCTCGCTTGTGCCGTCTTGTATTCTCTCCTTGGGAGTACAATGGGCACTAACTCTACACCGACATCCCTTCTGCCTTTATTGGAGGATCTAACACACGACACACCACCTCCA--GACAAACAGCCACTCCCTATCTTTTATTCATACATGTGTAACGCTGATACATTCTCACCGTCGCTCACAAGCGTTTCCTCAATTTGGGCCATGATGTCAGTTACCTTGGTTATTATAGCCTCCACCCTCTATTTGATGTACGTCTGCTTTAACAAGTTCGTGACTACGATGCTGAATGACTAAGTCCGATAGCCTATTTAACGAGGTGGGTGACAGCGATGTTCAGCATTCCGGCCATGGCCTCATCTAAGAAGTCCAAGGGTACAGCAG-----------------------------AAGG----------CATGTCCATGGAAGAACTCGTGACCCGTCTGACCAGACTGGAAATGGAAAACAAGACTCTAAAAAATCAAGT--GAAGAGCAAGTCTCAGAGC-------------GCTGACCCAATACAATCACCACCAGGCGGCGGCAGAACCCGAGAAGTCCTAACGGCCCGCCAAAAACAAGTTCTGATAACTCAAGCTATCAGCCGCCTGTCTTCACAAGCCATGCAAAAAATTGAACAGCGTGTCGTGGCAGAAATGGAAGATGTGCGCACCCGAGATGAGGCTGAACAAAAGATACAGTCACTGACTATACGAATACAAGTGTCTATGAGCTGCAGCAAATGTGGCACTGGCCCATCATCTACCAACCCAAACCCACGCAGCCAA----CTCACAGTCCAAACCCGTACTAGGCACCGTTCAAAGTCACGAGGCCGAGATTAAATCACATCAATGCGAGTCACGCA--AATAAACTTTATTTCAATTTAAACCTCAGTATCAG---AGTCATAATTCGTATTGGTAACATACGTGTACTTATGTAGGTATCTAGATGGGAGGCG---AACTGTGCAGTCTACCAACACTATGACTAGAAGTAGTGCAAATACTGACAACGCGGACCACTGGAGTAATA

a score=31227.0
s NC_007605.genome 77281 1044 + 171823 GCATGGAGAGGTTTGAGAATCTGGGCTGGGACGTTGGCGGGACTGGCACGGTGGCTTGGGCTGTGGTAACCGGTGGGCTCGTAAAAGTCCAGCGGGGCCGCAGTTTGCTAGAAGTGCTGGGAGGTAGATAGGTGGTCGCATTGTATCTCGGTCTTGGCGTAGTTGAATCACCGCCGTAATCTGTGGTGGGCTCTGTACTTGTCCGGGCTCCATGTCCTGTGGTGTGCTTTCCACCGGTGGTAGAATTGGCCTTTCCACCTGTTGAGGTGACCGTGGGAACCGCCGTCTTTTGGCCACTGGGGGCCTGGGGCGACGTTGCATTTTGGGGGGGCGTGCCTTTGGTGACATTAACCTCCCCCGGTTTTGTGGATGTGGAACTGTTTCCAGGGCCTGACGCTTGGCTGGTGGTGCCTGGGCGGGGTGCTGGCGAACTGGTGGACACATGATGTGTGCTGATAGAGGCTGGTGTCACCTGTGTTATATTTTCACCACCTGTTGGGTGAGCGGAGGTTAGTAAAGGCATATGTGACGTTGAATTGTCAC-TGGTG--------------GAGGGGCTGAGTGTCTCTGGGTTTGAACTGGGTCTCAGTGACATGGAAGAGGTTGAACTTGAAGTTATGTTATGTTGGCCTGTGGTAACAGCACTGGTTGCATTTTTTGGTTGGCTGGTAACTACTGGGGTGGGACTTGTTCCTCCTAAGGTGTGGTTGGTGGCATTTGCCTGTGGACTTGTTTCTCCCACAGTAGGGCCGGTGGCATTTGGGGTTGGGGTAGTCACTGCTGAGGTGGGGCTTGTTTTTCCCAAGGTGGGGCTGGTGGCATTTGGGGTTGGGGTAGTCACTGCTGAGGTGGGGCTTGTTTTTCCCAAGGTGGGGCTGGTGGCATTTGGGGTTGGGGTAGTCACTGCTGAGGTAGGACTTGTTTTTCCCAAGGTGGGGCTGGTGGCATTTGGGGTTGGGGTAGTCACTGCTGGGGTGGGGCTGGTGGCATTTGGG------------GTTGGGGTAGTCACTGCTGGGGTGGGGCTGGTGGCATTTGGGGTTGGGGTAG
s NC_006146.genome 71192  921 + 171096 GCATGGAGAGATTGGAGCCCTCGGGCTTAATTGTGGGTGGGACCGGCACTGTGGCTTGGGTGGTGGTAGCCGGTGGGCCAGTAGAAGTCCAGCGGGGCCGTAGCGTGCTAGAATTGGTGGGAGGTGGAGGGGTGGTTGCGTTGTA------TACTGTTGTGGCTGAGTTTCCACC---ACCCGTGGGCAGTTGTGTGCTTCCTCCGCTTCCAGGT------------------TCGGTGGTAACATTGGCCTTTCCACCTGCTGGGGTGCCAGTGGGAACCGTCGTCTCCTGACTGCTGGTGGCCGAGGGCGACGTTGCATTTTGGGCAGGTAGGATGGTGGTGACCTTAGTTGCCCCCGGCTCTGGGGATGTGGAACTGTTTCCAGGGCCTGCCGTTTGGCCGGTGGTGCCTGGGGGAGGCGTTGGAGAAGCGGTGGACACATGATTCGTGTTGGGAGCTTCTGGTGTAGTCTCTGTTATATTTTTGCTGCCTGTTTCATGAGTAGACGTGAGCGGTGGGGTGACTGAGGTTGAATTGACCCTTGGTGTATAGTTGGTTCTTGGTGGGCTTGTTAATCCTGAGCCAGGACTGGAGCTAGGTCCTATAGAAGATGGATAAGGTGTATT--TGTTATGACGGACGG-------------GGTTTCA---------------GTGACGCCTGGAGTGGGACTAATGGACGCTGGCTTGGGGCTGGTGGCGTT------AGGGCTTGTGGCTCCCGATGGGGGACTGGTTGCCACTGATGTAGAGCCGGAGACCACTGTGGTG-----------------GGTGA----GGTGTCGTTAGGGGT---GGTGGACACTG------------------------AGGTGGGGCTGGTGGCGTTAGGGGT---GGTGGACACTG------------------------AGGTGGGGCTGGTGGCGTTAGGGGT---GGTGGACA---CTGAGGTGGGGCTGGTGACATTAGGGGATGTCATACCAGTTGGCGTGGTCAAC------GTGGGGTCTTCGGGTTGTCTGGTTGGAGCAG

a score=0.0
s NC_007605.genome 78325 225 + 171823 TCACTGGTGAGGTGGAGCTGGTCATGTCGGGGGCCTTACTTTCTGTGCCGTTGTCCCATGGAGATGGACTTGGTGTCACCGGTGATGCGCCTGACGTTGTGCCGGCTGGTGTTGGGCTGGTGACATCCGCGGTGGATACAGTGGGGCCTGTGCTTGCAGGTGCGGTGAGGTTGGTAGGCACGTGAGTAGAGCTGGGTAGACCTGTCGTTGTATTGGGATCAGCAA

a score=12552.0
s NC_007605.genome 78550 562 + 171823 ATCCAGTTGTATTCAAGGTAGGGGAGGTGGTGGTGCTCTCGGGTGCCTTGGAGAATATAACCTTGTGGGTTGTTGTGGTGGCATTGGTAGCCGTTCGTGTGATAATGAGTGTCTTGGGGGCCGTGCCAAGACCCGAGACAGTAATGTCAAATGTCCGATTGCTCGCAAATGCACCAGAAATATTTTCACAACCCGAAGGT-----GTCCCCGAGGTG-AGAGTCCATTTGCACTTAAAGTCAGTTTCAGTGTTGTTTGGCCAGGCCCAAAAGGCAGTCACTGTAACATTTGGCGAGTTTGCGTCCTCAGAAGTGACCATTGGCACTGAATAGGTAGCATTGTCACCCACATATGTGATGTCTGTGGTGTTTGTCGGCATGTCCTGTGAAGCTGGAATCTCATCAGAGAACACAATGTTGGACTGAATGCAGTAATCTCCCCCGCTCGCCTTCGGTCCATTCCCAGAGTAAAACACGTACAGGATACTGTTATTGCCAAGAAATCGTGACACTGGACGTGGTGTCAGACGCAGGCTGTATGCATACCCTGTACCAGGTATTGGGGTGGC
s NC_006146.genome 72113 538 + 171096 A--------------AGTTACCGGA-------------TCAGGCGCCTTTGTAAAAGTGACCTGGTAGGCAACAGCGGTGACATTTGTGGCTGCACGTGAAATAATTAGTGTTTTCGAGGTTATGTTGTCCACCTCCACAGTGAGTTCAAATGTCCGATTAGACAAAAATTGGCCGGCCATTCTCTCGCAGCCTACTGGCTGCTGGTTGTTTGTGTGTAGCATCCATTTGCACTTGAAGTCCTTAGACGTGTCATTTGCCCAGGCCCAGAAGGCAGTCACCGTGACATTTGGTGCAGTGTTGTTCTCCAGTGGCGCCATCTGTAGTTGATACGTGGCATTTTGTCCAGTGTATAACACCACTTGAGTTTGCGCCGGCATGTCCTGAATAGTGGGCAGTTTGTCAGAGAACATAATTGGCGCCTTAAGGCAGAAGTC-CCCATGCTCAGAGTCTGG--ATCCTCAGTATACATAATATAGAGTGTACTTTCATTGCCTAGAAAACGTGGCACGGGGCGCGGCATTAAAGTCAGGTTGTATACGTAGCCGCCAATGGGCGCCGGCGTGGT

a score=26286.0
s NC_007605.genome 79112 793 + 171823 CACGGGACTCGTTGATGTGAGAATTCCGCCGCTGGGAACATGGCTCTCGTATCCACTGCAGGTGATGTTAAATTTGTTGTCTCCGGGCAGAACTTGTGAAATTTCGCCATCCTCCATAATACACTCAATATCTATCTCATTACCGAGCATTTCTGTTTTTACGCTGAAATTCGAGTCTTGAGCTGACGTTGGCAAACTTAAGGGTAGCGTGACATCCAGCCC-----CTGTGCCCTCACTACTGCCGTTATATTGGTAGAATTACAGTTATCC---CACTTTATGTATGGCACTGTT--TCTGGTATCAGGTAC-ACGGGGTTTTGCATTTCTGCATGGTGGCACCACATGGTTCCAAACACATCTTGAAAGTAGACATCTACAGATTCC-----AGGC--TTACTTGTTGCTCCTCTCCGGTGGTGACGTTAATTGGAAGCTTCTTAGACCGC--ATAGTTAGAGCCAATTCTCCTGCACCAAGGAGCTCCAGTAGAAAGAGATTGGTGGCATTTTCTGAGCCACCAAATGCACCTCGAGGTTGGTAGACAGCCTTCGTATGGGGTGTCAGCTG---GCCAAAGTCAAGATCAAGTTGATGCTTTTTGCCCCCGACATCGAAATTGATAGTTACATTGACATCTGCCGTGCAAACATTGCATGTGGGGTAAAATGGGAATTCCGGAATCTCAACATTGAAAAAACCAGGATCTTCACCCGTGAGATGGATCAGGCTCTGGATGGTGTACTGACACACAAGCAAGGCTGCCTCCAT--------TGTCTCGGCAC----CGATTTCTAGGCAGCATCCTCTTTAATAG
s NC_006146.genome 72651 790 + 171096 GCTGGGGCTTGCCGGGGTTAGAACCCCGGCACTCGCAAAATGAGGCTTGTCTCCATCGCATTTAATTGCAAAGTTGTTGTTTCCCGGCAAAACTGGTGAAATGGGATCTCCCTCATTCCGGCACAGCATGTCAATCCCCTCGCTTGTCATTTCCATATGTAGAGAAAATTTGGTCGCCAGAGGCATTGTTGGCAAGCTTATGGGAACTGATATGTCCATTCC-----CTGTGCCCTTACCACAGCTGTTATATTGGTAGAATTACAGTGGTTC---CACACAACAGGGGGCATCTTC--TTTGGTATAAGATAG-ACGGGTTCTTTCATTTGAACTCGCTGGCACCACAAAATGTCAAATGCGTCCAGGAAATAAATGTATAGAGCTTCC-----ATGC--TAACGTGCTCCTCATCCC---TACTGACATTAATTGGAAATATGATGGAACGC--ATTGTCAAAGCCATGGTACGAGCACCGAGCAACTCAAGGGAGAAGAGACTAGTAACATTTTCGATGCCACCACTGGCATGGAGTGGTTGGTAAATGTTTTGGGTAATAGGGGTGATCGG---TCCAAAATAGAGATCCAGATGCCTATTAGCTTCACCAACCTTGAAGACGATAGAGATGTTTACATCGGCAGTGCAGACCTCACACTTGGGATAAAAGGGGAACTGCAGCATCTCTATATTGAAAAATCCAGGATCTTCACCAGCAAAGTGGAAAACACTCTGGAGGGTGTATTGACATAACAGAAAAGCCGCTTCCAT--------TGTTTCAGTGC----AGATTCGCAAACAGCCCCTTCTTTAATAG
s NC_004367.genome 69619 802 - 149696 CATTGGGCTTATTGGTGTGAGTATACCACCACTCGCGAAGTTTGGCTTGTCCCCCGAGCAAGTGATAAAAAAGGTATTGCTTCCTGGTGCAATTGGTGA---TAAGTAGTTTTCCAAGTCGCAAGTTTCGTGCATACCGTTCCCGCCGAGTTCCAATCTAATTTGAAAAGAGGATTCTTCCGGT----TCGGCATCCATTGTGATATTGAC-CGTCCAATCCATTGTCTGACCGGTCACCTGCGCTGTTGATGAACTTGCGTTGCAGTCATTTTCGTATGCAATACTCGGCGGGATTAAATTGGGATAGAGAACTATTGGGTCCGTAATGTTAACCAAGTGGCATC---------TAGTTACATCCATAAAGTC----TGTAAATCTTACCAGAAATGCAGTTACCGGTTTGTTGCCTT---CACTCCCGCTTACCGGTGACTGGTT--AACGTCTATAGTAATGGCCATAAGCCCCCCACCTAGGAGCTCCATGACAAACAATCTATCTGCCCCATCCTTTCCACCTGTCACATGTACAGGAGTATAGATGCTTTTGTTCTGGTTCACCAACAGTGAGCCAAAGGCAACCTCGACCGTTTCTGTTTCAGTCCCAGATCCAATAATGAATGTCACATTGAGTTTTGGGTCACACGCCCGGCAGTGAGGATAGAAAGGAAAATTTGGCAACTCCACATTTAAAAATCCAGTCTCATCAGATGGTAGATTCACAACACTGTAGTAAACATAGCTACATAGCAATAGTGCGGTCTCCATATTTCACATGAATCAGTACTTTTCAATTAAGAGGTTGCACAGTCTTTAATAG

a score=37762.0
s NC_007605.genome 79905 1370 + 171823 GTACAAGGGGGGTGCGGTGTTGGTGAGTCACACTTTTGTTGCAGAC-AAAATGGACAAGGACAGGCCGGGTCCCCCGGCCCTGGATGACAACATGGAAGAA---GAAGTCCCATCTACCTCGGTTGTGCAGGAACAGGTATCGGCGGGAGATTGGGAAAATGTCCTCATAGAGTTATCAGATAGCAGCTCAGAAAAGGAAGCAGA---------AGATGCCCACCTGGAGCCGGCCCAGAAGGGTACGAAGAGAAAGCGGGTC---GATCATGATGCCGGTGGGTCAGCTCCAGCACGACCCATGCTCCCACCCCAGCCGGATCTCCCTGGGCGAGAAGCCATTCTCCGCAGGTTTCCACTAGATC------TAAGAACACTTCTTCAAGCGATTGGAGCCGCGGCTACGGTGAGCATCCCTATGGCCTAAGTGTGTGATGTGTGTTTTTACCCATCACACAACAACA-AGGTAAGTAATTTGTTGCCGTTGGTTTCAGCGCATCGACACACGAGCCATAGACCAGTTTTTCGGATCCCAGATTTCAAATACCGAGATGTACATAATGTATGCCATGGCCATTCGACAGGCCATTAGAGATCGTCGGAGAAATCCAGCTTCTCGTAGAGATCAGGCCAAATGGAGACTGCAAACCCTGGCCGCCGGATGGCCTATGGGTTACCAGGCATACAGCAGCTGGATGTACAGCTACACCGATCACCAGACGACTCCCACATTCGTACATCTCCAGGCGACACTTGGGTGCACAGGTGGCCGTAGGTGTCACGTGACCTTTTCCGCCGGCACCTTTAAGCTGCCGCGATGTACCCCCGGGGATCGCCAGTGGTTGTATGTTCAGAGCTCCGTGGGTAACATTGTACAGAGCTGTAATCCCCGCTACAGTATTTTCTTTGACTATATGGCTATACACAGGAGCCTCACGAAAATCTGGGAGGAAGTTTTAACACCTGACCAGCGTGTTTCATTTATGGAATTCCTAGGATTTTTGCAGAGAACGGATTTGTCCTATATCAAGAGCTTTGTCAGCGATGCCCTGGGCACCACTAGTATCCAAACACCGTGGATCGATGACAATCCT------------AGCACGGAGACGGCACAGGCTTGGAATGCCGGCTTTCTCCGGGGTCGTGCGTATGGGATAGACTTGCTTAGAACTGAAGGGGAACATGTCGAAGGTGCTACCGGTGAAACGCGAGAAGAAAGTGAGGACACGGAGAGCGATGGAGATGATGAAGATCTTCCTTGTATAGTGTCCAGAGGTGGACCTAAGGTCAA------ACGACCCCCTATATTTATAAGACGTCTGCACAGGTTGCTGCTGATGAGAGCGGGCAAACGAACAGAACAGGGCAAG-GAGGTACTGGAAAAGGCCCGTGGG
s NC_006146.genome 73441 1388 + 171096 GCACCGAAGGGGTGCGGTGTTGGTGAGTCATGCTTTTGTTGCAGACAAAAATGGAGGAAGAAAGGCCGGGCCCCTTGGCACCGGATGACAACATGGAAGAAGAGGAGGTTCCATCCACCTCCGGTGTCCAAGTACAGGCGTCAGGTATGGATAAGGACATTGTCGTCATACCTGATTCTGAAAGTAGCTCGGGGGAGGAAGGAGAGAGGTTACCAGATTCACCACCGCCACCACCACAGAAGGGGAAGAAGAGAAAACGGAGAAGGAGCGATGACGCCAGTGGCACAACACCGAGCCAGCCACCTTGTGTCCCCCAGCTGGAGCTTGGGGTGGTAGAAGACTTT---GGTGGG---CCACAACATCAAACTTTAGGAAAGCTCCTTCATGCTGTCAGTGCCACGACTTTGGTGAGCAACC--ACCGCCTTGTTGTGTGATGCGTGTTTTCACCCATCGCTCAACAAGGCACGCGTGTGATTTGTTGCCATTAATTTCAGCATCCCAACACGCGAGCCATACGCCTGTTTTTTGGATCCAGTATTCTGACTACCCAGAGGTTCCTGGCTTATGCCATGGCTGTCCGACAGGGCGTTAGAGATCGTCAGGCAATTCAAGCTACGATTAAATGTCAGAACTCCTGGAAACTGACCACCACGGCCTCACGCTGGAGAATGGGTTACCGGAAGCACAGCAGCTGGATGTACAGCTATTCGGATGATGTGCGGCGCCCTATAAGAATTGCTATTTGTGTAACATTTGCATGTGAAGAAGGCGAGAGGTGGAACGTGTCCTACTCAGCAGGCACCTTCAAACCGGTGCGGGCAAGCAATTATGATATGGTGTGGCTAACCACACACCGGTGTGTTGGTGAGCTAGTGGAACTCTGTGATCCTATCTATCATCCTTTCTTTGGCTATCTGTGCATTTTCCGCTGCCTGAAATTCATCTGGGAAAATGTGTTGTTGCCCGAGCAACGCGTGCCATTTATGCAGTTCCTAGGCTTTCTACAAAAGACGGATAACATCTACATGAAGCGGTTTGTTCAGGAAGGCCTGCTCACCTCCAACATACAAACGCCGTGGCTGAGTGAAGACCCCGAGGGAGCAGTGGACAGGGGGTGGACACAAGC------------CTTAATAAGGGGGCGTGTGTTAGGTTTAAGTGGTCTTGGTCCCGCGGCAGAGCCCGACAAAGATGCTACTGGTGAAACGCAGCAAGAAGCTGAGGACATGGAGAGTGATGATGAGGATGAGA---TTCCTCGTATTGTGTCTCGGGAAGAAACCAAGAGAAAAGATGCACGCCCCCCTCAATTTCTAACACGCACGCACAGGCTAATTCTTGAGAGAACAGGGGGGCTTAC-GCTCAGGGCCAGAAAGGCCCTGGAGGGACCCAGTGAG

a score=0.0
s NC_007605.genome 81275 265 + 171823 AGCACTTATGGCACACCTAGGCCGCCTGTTCCGAAACCAAGACCAGAGGTCCCACAAAGCGACGAGACAGCTACCAGTCACGGGTCGGCGCAAGTCCCAGAACCCCCAACCATTCACCTAGCAGCTCAGGGAATGGCATACCCATTACATGAACAACACGGCATGGCCCCGTGTCCGGTAGCACAGGCCCCACCTACGCCCTTGCCCCCTGTATCTCCAGGGGATCAACTCCCAGGTGTTTTTAGCGACGGGCGAGTGGCGTGTG

a score=2800.0
s NC_007605.genome 81540 105 + 171823 CACCAGTACCCGCCCCGGCTGGGCCTATTGTCCGGCCCTGGGAGCCATCCCTGACACAGGCTGCGGGGCAGGCCTTTGCACCCGTTAGACCACAACACATGCCAG
s NC_006146.genome 75244 102 + 171096 CACCAG---CCCCCCCCACTGGGCATTTTGTTAGGCCCTGGGAGGCAGCACCGTCACAGGTTCCCAAAGTAGCCCCGGCTACACATATGCCAGATCCCATGGCAG

a score=0.0
s NC_007605.genome 81645 667 + 171823 TAGAACCCGTCCCTGTCCCGACAGTGGCACTTGAGCGACCAGTTTACCCCAAGCCAGTTCGTCCGGCACCTCCTAAGATTGCTATGCAGGGCCCCGGGGAAACTTCTGGCATTAGACGCGCGCGGGAGCGTTGGAGGCCCGCACCTTGGACGCCAAATCCACCCCGTTCTCCCAGTCAGATGTCCGTGCGTGACCGTCTGGCTCGTTTGCGTGCTGAGGCACAGGTCAAACAGGCTAGTGTTGAGGTGCAGCCCCCCCAGTTGACCCAAGTATCCCCTCAGCAACCAATGGAGGGGCCGTTGGTACCAGAGCAGCAGATGTTCCCTGGTGCCCCCTTTAGCCAGGTTGCTGATGTGGTCCGGGCACCTGGGGTACCGGCGATGCAGCCACAGTACTTTGACCTCCCCTTAATTCAACCCATTAGCCAGGGGGCACCCGTGGCCCCGTTGAGGGCTAGTATGGGCCCGGTACCTCCGGTACCGGCAACACAGCCACAGTATTTTGACATCCCCTTAACTGAACCCATTAACCAGGGGGCATCCGCGGCCCATTTTCTCCCTCAGCAACCGATGGAGGGGCCGTTGGTACCTGAGCAGTGGATGTTCCCAGGTGCCGCCCTGAGCCAGAGTGTTAGGCCAGGGGTAGCGCAGTCACAATATTTTGACCT

a score=111743.0
s NC_007605.genome 82312 5406 + 171823 [encoded data, 5593 characters]
s NC_006146.genome 75938 5298 + 171096 [encoded data, 5593 characters]

a score=0.0
s NC_007605.genome 87718 249 + 171823 TTCATCGTCAGTGTCACAGCCAAATAAGCCACATCGGAAACATCAAGACGGCTTTCAACGTTCAGGCCGACGTCAAAAACGAGCCGCGCCTCCCACCGTGAGTCCTTCGGATACTGGGCCTCCTGCCGTGGGGCCTCCTGCCGCGGGGCCTCCTGCCGCGGGGCCTCCTGCCGCGGGGCCTCCTGCCGCGGGGCCTCCTGCCGCGGGGCCTCCTGCCGCGGGGCCTCGCATACTGGCGCCTCTTTCCGC

a score=5213.0
s NC_007605.genome 87967 364 + 171823 TGGGCCTCCTGCCGCGGGGCCTCACATAGTGACGCCT---CCTTCCGCCCGGCCTCGTATAATGGCGCCTCCCGTCGTACGTATGTTTATGAGGGAGCGACAGCTCCCCCAGTCCACCGGCCGTAAACCTCAGTGCTTCTGGGAAATGCGGGCTGGTCGTGA----AATTACACAAATGCAACAAGAACCAAGTTCACACCTGCAGTCCGCCACTCAGCCTACAACGCCTCGCCCATCATGGGCCCCATCAGTCTGCGCCCTCTCGGTGATGGATGCTGGTAAGGCCCAGCCCATAGAAAGTTCACACTTGAGTTCCATGTCGCCCACACAGCCGATATCGCACGAAGAACAACCCCGGTATGAGGATCCT
s NC_006146.genome 81374 337 + 171096 TGGAGCTCCTGCTTCGACGCAACACGAGAAGCAACCCAAGTCCTCCGCCC---------------CACCCTCCAAATTCCGTGAATTACTGAGGGAACGACTGATGGAGCGGCCATTTGGGCCAAAGCCAAAGAGCTTTTGGGAAATGCGGGCAAGTCGTGATGGTAGTGGCA-------AACAACCACCAGCTTCACGCCGGGGGCCAAC-------TCTACAACGTCCTACGC-----GGCTCCCATCCGTCTTTGTGCTCCCCTCGGTGCCCACCACGAGACCTCGGGCCTCGGAAGAGTCTCGCAAGCACCCATTGTCTGCCAAGCGGCCGACACTACATTCAGAGCAGCTCACGTATGAGGATTCT

a score=0.0
s NC_007605.genome 88331 56 + 171823 GACGCTCCTCTGGATTTAAGTTTACATCCAGACGTTGCTGCTCAACCAGCTCCCCA

a score=17553.0
s NC_007605.genome 88387 787 + 171823 GGCTCCATACCAGGGATACCAGGAGCCGC--------------CGGCCCCC-CAGGCTCCATACCAGGGATACCAGGAGCC------GCCGCCCCCCCAGGCTCCATACCAGGGATACCAGGAGCCGCCGGCCCACG-------GGCTCCAATCAT--------------------CTTCATATCCAGGATATGCGGGTCCCTGGACCCCAAGGTCTCAACATCCATGTTATAGGCACCCCTGGGCACCATGGTCTCAAGATCCTGTGCATGGGC--------ACACCCAGGGTCCATGGG-------ATCCCAGGGCACCACATCTCCCACCTCAGTGGGATGGATCTGC------AGGACATGGCCAGGATCAGGTCTCCCAGTTCCCAC-----ATCTGCAATCGGAGACAGGCCCACCACGTCTTCAACTTTCATTGGTGCCACTGGTCTCATCCTCTGCACCATCATGGTCATCTCCCCAGCCCCGAGCCCCCATACGCCCCATTCCAACAAGATTCCCCCCTCCCCCTATGCCGTTACAAGATAGCATGGCCGTGGGGTGTGACT-CATCAGGTACAGCATGCCCAAGCATGCCCTTTGCCAGTGATTACAGTCAAGGTGCATTTACCCCACTGGACATTAATG-CCACCACGCCAAAAAGGCCTCGAGTAGAAGA-----AAGTTCTCACGGACCTGCCCGGTGTTCCCAAGCTACTGCTGAAGCACAGG------AGATTCTCAGTGACAATTCTGAGATCTCCGTGTTCCCAAAGGACGCGAAGCAGACTGACTACGATGCATCCACTGAAAGTGAGCTAGATTAAGGGG---ATCCAAG-----------------GTGACCCCTGTTAG---CTATTTGATCTTTG
s NC_006146.genome 82364 882 + 171096 GATTCCATACTTGGGATACAGGGAGTCGCAGCCACAACAGCCCCAGCCCCCACCAGCTCCATATCCGGGTTACGGAGCACCACGGATGCAGCCATCGCGGGCTCCACACCCGGGTTACAGGGAGATACAGCCCCAGGCCCCATTGGCTCCATACATGCATCCACGGGTTTCAGTTGCTCAATATCCAGGTGACTCAGGTCCCTGGGGTTTACGGGCTCAATATCAAAGATATAGGCACTCGTGGGCATATTGGTCTCAATATCCAGGTTATGGGCCTCCTTTAACCCCCTGGGCCCAACGGCCTCCATATCCAAGTTATCCATGTTCACAGCCTACTTGGGCTCCATATCCCAGGCCAGCACATACCCATCCTTTACAACCACAGCCCGTACCACCGACCCCCGAGCAAACACAGGCCCAACAGTTGCCCTATTCACA-----GACCCCAGATTCAGCTGCAGCACTGCCATTGTTATCTACACCTCGTGAAGCCCCTTTGCGCCCCATTCCGACAAGACTCCCAACTCCTTCTACCCCGTTACAAGATAGCATGACCACGGG-TGCAACTGCACCGGGTACTTCGCACCCGAACGTAATTTTTGCCAGTAACCTCAGTCAAGGGGCCTTTACACAAGTGGGCACCGAGGGCCAACAT-CAAAAAAGGCCTCGTTTGGAAGGCTCTCATTTCCACACAAACTTAGACA--------AAGCCGCCGGGGAAACCCAGGCCGCTGAGGTTATTAGTGAGGGCTCTGACGTTTCTAAAGGCCAAAAGGACACCCAGCATACAGACTATGATGCATCTACAGAAAGTGATATAGAGTAAAAATTTCATCCGAATACCCAGCCCTGTGTCTGGGACCCCCTCTAGTCTCAATCTTTTCTATG

a score=73740.0
s NC_007605.genome 89174 892 + 171823 ACTGACACATAAACATGGTTTAAGGAATGAACACTCATGGTGTGAGACTGGAACTGTACTAAATTTGCTGACATATGTACAATGAGAGCCAAAAATTTGATAAACCTTAAAAGTCCCCCCATCTAATGATGTCCAGTTCCCTTCTCCCA---CCCTGTACACCCCGACCCAAAGGGACTCAATGGCATTCAGATTTCTAGTTACCACAGGTAGAATATCGGGCGTTGGCCCATAAAAATAAGTGCATGGATATAGCTCTGCACAGGCTTGGAAACACCCATTCCAGGTGTGCTTCTTTTTGGTGAAATAAAAACAGCATCCTTTATATGAAAATGTGTATTCTCTGGTGTTGCAGTATGTACAGTTAGCTTTGGTATAGTTTTGGGGTACC-----TGAAATGTGTGCAGGGTGGGTGTCCAATGTGGCAGTTTTACCTCTTTGTCCCCATACTCCTGCTCGGCCGTCTT------GTTAAAGTT----AACCGGCGG--TGGAGGATCCACCGGCCAGACCTCTACATTTGGTTTGGGTACCCAGGTGATGGCCGCGGCTGCCACCCGCCCTCCTCCTCTTACCCTGGGTGGCAAAAAGTATGCCAGGAGTAGAACAATAACAAGTGCGATGGC-------------GGTAAACAATGGCACCCTCAC-----CTGCTTAAATGAAACCATGGCAACCACTTCAAA-GAGAGCCGACAGGAAGATATTTATTAATATTCCATTAGTAAACGAGGCGTGAAGCA-GGCGTGGTTTCAATAACGGGAGTTAGAAATTTAAGAGATCCTCGTGTAAAACATCTGGTGTCCGGGGGATAATGGAGTCAACATCCAGGCTTGGGCACATCTGCTTCAACAGGAGGCGCAGCCTGTCATTTTCAGATGATTTGGCAGCAGCCACCT--GCG--GACAAAAA
s NC_006146.genome 83246 891 + 171096 ACTAACACATAAACAGGGCTTATGAAATGAACACTCGTGATGAGAAACTGGAACTTTACTAGATTTACTGACATAAGTACAATGAGAGCCAAAGATCTGATAAACTTGATAATTGCCCCCATCTAATGATGTCCAGTTCCCCTCTCCTA---CCTTGTACACTCCAACCCAAAGAGACTCTGAAGCTTTTAAATTTCCAGTTACCACAGGAAGGATGTTGGCCGTTGGCCCATAAAAATAAGTGCACTCATATAGCTCAGCACAGGCCTTAAAACATCCATCCCAGGGATGCTTCTGTGGGGTGAAATAAAAGCAGCGCTTGCTAAATGAGAATGTGTACTTTTGAGTGTTGCAATATGTGCAGTTAGGTTTGGTGTAATTCTCAGGTACC-----TTGAATGTGTGCAGGGTGGGTTTCCAATGTGGAAGGTCTATCTCTGGCTTTCCATACTCCTGCTCGGCTGTCTT------GTTAAAGTC----AATTGGTGG--CGGGGGCTCTGCGGGCCAGACCTCCACCTTTGGGTTGGCCACCCAGGTGATGGCTGCGGCCGCCACCTG---TCCTCCTCTCACCCTGGGTGGCAAATAGTATGCCAGGAGGAGAACAATAACAAGGGCCAGGGC-------------GGTAAACAGAGGCACCCTCAC-----CTGCTTAAATGAAACCATGGCAACAAGTTCAAA-GCATTCCAACAGGAAGTCATTTATTAATATTCCATTAGTAAACGGGGCGTGATGCA-AGCGGGGTTTCGATGGAAGAGGGTAAAATTATATAAGATCTTCATGGATAATGTCTGGTGTCCGGGGGATAATGGAGTCAACATCCAGGCTTGGACACATCTGCTTCATCAGGATGCGTAGCCGTTCATTTTCCGATGATTTGGAGGCGGCTACCT--GTGTGGAAAAAAA
s NC_004367.genome 73143 870 - 149696 ACTGGCGCATAAGCATTGTTTGTGAAAGTTACACTCATAGTGGGATGATGGGCCTTTGGCCTTATTCCAGATATAAGTACAATGTGAACCATAAATATCATCAACCAGGCAATTATCCTCAGTGAGCGACTTCCAAAGGGCGGATTTCGAGTCCCTGTAAATCCCAACCCATAAAGACTCCCCATTCTTTAAATTCTTCTGAACTATAGGTGAAGTATTTGCATTGGGCCCATAAAAAAATGTGCAATTGTGCAGTTGGGCACAAACAGAGAAACAATGTTCCCATGTGTATGTTTGCTGTGTAAAATAAAAGCATAGATTTTTAAATGAAAACGTTGTGACCCTGGTGTTGCAAAATATACAATCTGGCTT--CTCAAATCTGG---ACCCAAAGCTAAATGTTTTAGGCTTTACAGTCCAGTGTGGCATATCTATATGGGGGCTTTCATTCATCGGTTTAATCATAGTTGATACATTGAAGTCCAAAAACTTGTAATTTGGGAGATCTACAGAAGGTTGCTCCACCCATG----------TTAGATATTGCATGCG-----------------TCCAATAAATCTGTGACTCATATAATAGGCCGAT------ACAATGACCAAAGCCAGCACACACACCGAAATAAGTAGCCAGGCAAACCTACACGCGTTTTTCCTTATAGTCGCCATAACACAAACAACAGACATGATCCG--AGTAAG--ATTTATTAATATT------GTAAA--------AAAGCATAGCATGATTT------AATGAGTTAAATGGTTCAGTGGT--TCGTGGTATCCGGCAGACGTTGAAGGTACTATGGACTCCACATCAAGGGTAGGACACATTTGACGAATTAACACCCGAAGTCTATTATTTTCTTCTGTTTTCGCGGCAGCAACCTAAATG--AAAAAGAA

a score=744.0
s NC_007605.genome 90066 59 + 171823 T-CAGGCGTTTAGATGGGGCATTTATGTTTGGGA---------------------CGCTAGCCGCCTGGGCATTCGTGTTA
s NC_006146.genome 84137 81 + 171096 TGCATGTGTTTAGCTTGGAAATTTATGCACGGGGGGGAGATATCTGCCACCCGCTCATTCACCACTTGAACAGTCTTGTTT

a score=16331.0
s NC_007605.genome 90125 148 + 171823 GTATATACTGACCTCACGGT-----AGTGCTGCAGCAGTTGCTTAAACTTGGCCCGGCATTTTCTGGAAGCCACCCGATTCTTGTATCGCTTTATTTCTAGTTCAGAATCGCATTCCTCCAGCT------GCGAGCAAGGGAATGCGTTACTACAAGTG
s NC_006146.genome 84218 145 + 171096 CATTGTACCTACCTCACGGT-----AGTGCTGCAGAAGATTCTTGAACCTGGCTCGGCATTTTCTGGAAGCCACCCGGTTCTTGTAACGCTTTATTTCAAGTTCAGAGCCACACTCGTCCAGCT------ACAAGCAAGGGA-CACATT--TACAAATG
s NC_004367.genome 74217 159 - 149696 GCAAAAACAGAACTCACAGTGCGAAAGTGCTCGAGCTGATTTCTAAACTTTGCTCGGCATCGCCGGGAAGCCAGGCGGTTTCTGTATCGTTTTCTCTCTTGGTCAGTCTTACATTCTTCCAGCTTAAAAAAATAACAAGCAAACATTATACCATAAGTG

a score=39103.0
s NC_007605.genome 90273 816 + 171823 GTGCCTAGTCAGTTG-----------------------AAAC-------------AAGCCCCACCATCC----------GCTGCC--------------GCCCCTCCA--------------TGAGCCCCACCGTCC------------------------------GCTGCCGCC--------------CCTCCTTGAGCCC------CTCCTTACCGATTCTGGCTGTTGTGGTTTCCGTGTGCGTCGTGCCGGGGCAGCCACTGGTGCAGGCTGTGGAACACCAATGTCTGCTAGCTGTTGTCCTTGGTTAGCCCCGGGGCAAGCAAACACCACTGCTGCTGCTGTTTGAACAGTAGAATTGTCTCCAGGTTGAGGTGCTTCTCCCCCGGCTTGGTTAGTCTGTTGATTCTGGGTTATGTCGGAGACTGGGAACAGCTGAGGTGCTGCATAAGCTTGATAAGCATTCTCAGGAGCAGGCTGAGGGGCAGAAAACCACGACCCAGTCGGAGCGGTTGAAACATGATAGGCAGTTAGCTG---GCCTTGTGGCAGAGGCTCTGGCAGCACCGGCCACAGCACACAAGGCAAAGGAGC---------TTGCGATGGCCCTCCCAGGTCCTGATAGACTCTGGTAGCTTGGTCAAAAGCTTGTACAAAAGGCACCTGGTATGG---GTCAGGTGTAAATTTTACATCTTCAGAAGTCGAGTTTGGGTCCATCATCTTCAGCAAAGATAGCAAAGGTGGCCGGCAAGGTGCAATGTTTAGTGAGTTACCTGTCTAACATCTCCCCTTT-AAAGCCAAGGCACCAGCCTCCTCTGTGATGTCATGGTTTGGGACGTGCTAAATTTAGGTGTGTCTATGAGGTACATTAGCAATGCCTGTGGCTCATGCATAGTTTCTAAAAGAGGAGGAGGCAGTTTTCAGAAGTGTCTAAAATAAGCT
s NC_006146.genome 84363 949 + 171096 TGTCCTGCCCAGCTGCCCCTCAAGCCCAGCTGCCCCTCAAGCCCAGCTGCCCCTCAAGCCCAGCTGCCCCTCAAGCCCAGCTGCCCCTCAAGCCCAGCTGCCCCTCAAGCCCAGTTGCCCCTCAAGCCCAGCTGCCCCTCAAGGCCCAGCTGCCCCTCAAAGCCCAGGCTGCCCCCTCAAAGCCCAGCTGCCCCTTCAAGCCCAGCTGCCCCCCTACCGATTCTGGCTGTGGTGTTTTCCTCGGACGTCGTGCCGGTACAGGCGCCGTGGCAGGTGGTTGGGCATCCACCTCCACCAATGGCTGGCCTTCATCAGCTTCCGGGCAGGCACATGCCGCTTCTGCTCTCGTTACAGCAGTAGAATTGTCTCCAGGTTGTGGTGCTTCTCCCCCGGCTTGGTGAAACTGTTGAATCTGGGTCAAGTCTGGGACTTGGAGCAGCTGAGGTGCTGCATATGTCGGATAAAGATTCTCAGGATTAGTCTGAAAAGCAGGAAACCACTGCCCAGTAGGAGCGGCTGAAAGGTGATAAGCAGTGGGCTGCTGAACATGTGGCAGTGGCTCCGACAGCACCGGCCAAAGCACACAAGGCAGACTAGTAGTAGGCTGTTGCGATGGTCCACCCAGGTCCTGATAGACTCTAGTAGCCGTTTCAAAGGCCTGTTGGAACGGCACCTGGTATGGTGCGTCAGCTGTATATTTCACATCTTCAGGAGGCAAGCTGGGGTCCATCGCGAGAGGCAGAGATAGGAAAGATGACCAGCAAGTTGCAAT----AGTTAGCTACCTTTGTGACAGCTCCTCTTTTAAAGCCAAGGCACCAGCCTCCCCAGTGATGTCATGGTTTGGGACGTGCCAAAATTAGGTGTGACTAGAAGGAACATTAGCAATGCCTGTGGCTCATGCATAGTTTCTAAAAGAGGAGG---TAGTTTTCAGAAGTTCCTAAAATAAGCT

a score=31277.0
s NC_007605.genome 91089 279 + 171823 GGTGTCAAAAATAGACAGCCCAGTTGAAATATGCATGGCATGCAGCAGACATTCATCATTTAGAAATGTATCCAAGATTTCATTAAGTTCGGGGGTCAGGGGGGAGTCCAGATTCAAATCCTCTGTCATGGACTCTAGTGTTGTGGTCAGTTCGTCCAAATGGCCACGAGGGGGC-----------GGGTGGCTCAGGTCCATC-------------TGTCCACATATGGCTGCTTCCTCCTTCTGGGGAATAACA-GTGTCAGCCATCTCCCTTAGGGCCTTCACGGCCTGACTGGTTTCTTC
s NC_006146.genome 85312 279 + 171096 GGTGTCAAAAATAGACAACCCTGTTGAAAGATGCATGGCATGTAGCAGACACTCATCATTTAGAAATGTATCTAAGATTTCATTAAGTTCGGGGGTCAGGGGGGAATCCAAGTTTAAATCCTCTGTCATGGTCTCTAAGGTGGTGGCCAGTTCGTCCAATTGACCACAAGGGGGC-----------GTGTGGTCAAGAGCCATA-------------TGTCCACGTTGTGCAGCCCCTTCCTTCTGGGGAATGGCAAGTGTCA-CCATTTCCCTCAGGGCCTTCACGGCCTGGCTGGTCTCCTC
s NC_004367.genome 75186 279 - 149696 GGAGTCAAAAATGGATAGCCCGGTGGCCAGGTGCATGGAATGCAACAGGCAGTCATCTAATAGAAATGTATCCAGCATTTCACTGATGTCCTGCGGCAGTGGGGAACTTAGGGGGATTTCATCAGGCACCGTTTCCAAAACCTTTGACAGTACATCTAAATGGCCACTAGGTGGCTGACAAGTGTTGTGTTGGCTGGTCCCATCATCCAAACTCGGATTTCCATGTCCAGCCGCTTCT-------------------G------CCAACTCCCTGAGGGCACAAACGGCACGCTCGGTTTCATC

a score=3149.0
s NC_007605.genome 91368 147 + 171823 ATCAGGGTCCTCCAACAGATGACTTGCCTCGGGGGTTACTGCGGGG-GCCGGGTCAAGTGG-CTGGGGCACCGGGGCTGGCGTTAGGGATCCGACCGGTTCATGGACAGGTCCTGTGGGGGTGGGAGCCAAAGAGGCAGGCAGGGGCCG
s NC_006146.genome 85591 147 + 171096 GTCGGGATCCTCCACGCCGGTCCCGGCTTCTGGCGTCTCCACCGGGCATCTGGTCACACGGTCGGGGGCACGTGGGGTGGCAGGAGGCAGCCGCCCGCCTCGGAAGCTGGCACCG--GGGCAAAGGGCCAGAGAGGCAGACAGGGGCTG

a score=9045.0
s NC_007605.genome 91515 36 + 171823 GTTGGCCCACGGGGATCCGGGTGGATGGAAGGGCCT
s NC_006146.genome 85738 36 + 171096 GTTGGCCCACGGGGACCCTGGTGGATGAAAGGGCCT
s NC_004367.genome 75621 36 - 149696 GTTAGCCCATGGGGACCCGGGTGGATGAAAGGGCCT

a score=28495.0
s NC_007605.genome 91551 580 + 171823 GATCCTCTTTGGCTGACACACCTCTCGCCCCTCGAACACGTCAGATATGGCACTGCCCGCTTCCGGCTTTGGCAGGAACATACCTTCCCGGCTATCCCTGAGGCCCTTCTTCCTTTTAACGGGAGGAAGAAAGGTGGGCTTTGAGGGGTGGGGGAATATGGGTCTCTCATCGCTCTCTTGGTGGACCGCTGCTATCCAAGGCTGTTCAGGTTCCGCCGC-------GTTGGAAGGACATGGAGTTTGACCACGGTTGGGCCTGGATGTCCGGCGCGACTTTGGGGCCCGCAGGCGCGGGGCCTCGGCCCTGGCCTCTTCCCGCTCGCTCTGCTCGGTGTCACTGTTGCCCGAGTCACTGCTGCTGGAACTGCTGTCACCGCAGTCGGCGCTTTGGGCACCGGGCTTCAGGGGCATGGTCGGGCTCGGGAGACTTTCGAGTTCATCTGTAAAAGCATGAAACTGTCCGGACTCCGAGTAGCGGGCCTCGGTGTGAGAGGCACCCCCATCATTCCCCATGAGCTCCTCGTCCATCCTGTCGGCTCCGGACACGAGGATAGGAGTTTCCACTGCCTTGGACTTGGTTGAC
s NC_006146.genome 85774 571 + 171096 GATTCTCTTTGGCTGGCGTGTCTCTCGTCCATCGGCCATGTCAGGCGTGACACTGTCCGTTTCTGTGCTAGGTAGGAACATACCCCCCCGGCCATCCCAGAGGCCCTTCTTCCTTTTAACGGGAGGAAGAAAGGTGGGCTTCGAAGGGTGAGGGAAGATGGGTCTCTCATCAGCCTCGTGG------GTCAACATCT----CTTCTCGGGCCACGCTGGAACTAGGGTGAGAGAGCCGCGGGGCTTTACCCTGG---GGCCTGGATGGCCTGCGGGACTTTGCCCCCCCCAAGCGAGGCGCCTCCGTCCCAACCTCCTCCCGGTCACTCTGGTCAGTGTCGCTGTTGCCAGTGTCGCTGCCACTGGAGCCGCTGTCTCCG---TCGGCTCCTCCAGCTTCTGGATCAAGGGGCATGTCTAGGCCAGGGGGGCTCTCGAGCTCATCCGTGAAATCATGAAACGGTCCGCTTTCTGCGTGGTAGGCCTCGGAGTGAGAGGCCCCTGCATCATCCCTAATGAGCTCCTCCTCCAGTCCCTCGGAGCCAGACACCAGAATCGGAGTGTCCACCGCCTTGGGCTTGGTTGAC

a score=236879.0
s NC_007605.genome 92131 2358 + 171823 AGCAGGCACGCGGGAAGCACGCCGCTCACGTAGCTCCTCTGTCCGGCGTGGCTGGAGTAGGAGGCCCGGGGCAGTGTCTTAATCAGAGCCCTGACATCCTTAACATCGTCCGTCAGATGGCCTGTCTTGGACGAGACCATAGTCTGGAACATCTCCTCGAGGACGGGATAGGTGAACACCCACTTGCAAAAGGCCTTGAACTTGGAGCTTAGGAGGCCTTCCTTCTCCATCCTGTTCAGGTGTTCCACTACCTGCTTGCCGGAGGCCATGATGGCCGCGCGGTCCACGCCCAGCACCTTGCTGTAGGTGTAGGCCCGCACCCGACTGTGTTTTAGGAGCTTGTACATAGCGGTGCCTATGGTGGCAGGAATCATCACCCGGTTGCTGGGGGCCTGGATGAAGAATCTGTCAGTGACCACTATCAGGTGGTCTAACACGTAGCGCATCACTATAGGGCACGCGATGGAACATGCGTCGTTGCCGGCATTCTCAGCCCGTCTTCTTACCCTGTTGTTTCGGAGAATGGCCCAAAAATTGCAGATGTTGAGCGTGGCCATTAGCCCGCCCCATTCTCGCCCGTGGGCCTTGGCCTCATTTATAAATGCCTTGCATATTTTGTAGGATCTCAGAGTAATCTCCACACTCCCGGCTGTAAATTCCTTGTTGAGGACGTTGCAGTAGTCAGAGACCAGAGAGCCCAGCTGCTTTTTGATTTCAGGAGTTAGCCTCAGAAAGTCTTCCAAGCCATCCTTTTTAGGCCTCATGGCTAGTAGTAACAGAGGAAATGCCCGACCATTAAAATCT------TTCCTCCATGAGCTTTACCTGAAACACTATCCCGAAGTGGGGGATGTGGTGCATCTACTGAACACCAT------------CGGGGTCGACTGCGACCTCCCACCTAGCCACCCACTCCTG-ACAGCCCAGAGGGGGCTGTTCCTGGCAAGAGTCTTGCAGGCTGTACAGCAGCACAAGCTGCTGGAAGACACCATCGTCCCCAAGATCTTAAAGAAGCTGGCTTATTTCTTAGAGCTGCTAAGCTACTACTCCCCCAAGGATGAACAGCGTGACATCGCCGAGGTTCTTGACCACCTCAAGACGAATCGGGACCTGGGGCTGGACGACAGACTCTGGGCCCTGATTAGGAAACTGCGCCAAGACAGACACCATGCCTCTGTAAATGTCCTCATGCCAGGAAGCGACTACACAGCCGTGTCGCTGCAGTACTACGACGGCATCTCCATAGGTATG--AGGAAGGTAATCGC--GGATGTCTGCCGCAGTGGCTATGCCTCCATGCCCTCCATGACGGCCACGCACAACCTCTCCCACCAGCTCTTGATGGCGTCCGGGCCCAGTGAGGAACCGTGCGCCTGGCGCGGGTTCTTTAACCAGGTCCTCCTCTGGACTGTGGCCCTCTGCAAGTTTCGCAGATGCATTTACTATAACTACATTCAGGGATCTATAGCCACCATCTCCCAGCTTCTGCACCTCGAGATCAAGGCCCTCTGCAGCTGGATAATATCCCAGGATGGCATGCGCCTCTTTCAACACAGCAGGCCTCTCCTCACCCTCTGGGAGAGCGTGGCCGCAAATCAGGAGGTCACGGATGCCATTACCCTGCCTGACTGCGCTGAATACATAGACCTACTAAAGCACACAAAACAT------GTCTTAGAAAACTGTTCTGCCATGCAATACAAATA--AATTTCTCTTACCTGCGTCTGTTTGTGTAGTGAGGTGTTGTGTCCTGTATGGTATTCTACTTTAAAA-AGGCCGGCTGACATGGATTACTGGTCTTTTATGAGCCA-TTGGCATGGGCGGGACAATC----GCAATATAAAACCCTGACCATCACATGGG-GCATTAGGCGACTCTGCATCAGCATCGCTTAAGTATGA-GTGGGCAGC-----AGAGAGGCTCGGTTATTTTGGTTCCTGA-----ACATCTGGCTGGGGCATTAACTAAGCTTATGAGCGATTTTATCACAGGACAAGATGTCACTCTTTCTGGAGGAAATATTGCAGTCAAAATTCGCGATGCTATAAACC----AGACCCCCGGGGGTGGTGATGTAGCTATACTTTCTTCCCTGTTTGCTTTATGGAATGCCCTCCCA--------ACATCTGGTAGACAATCCTCCAGGGACGATTTAATCCCAGCCGCCGTGCAGGCCTTAACCACGGCCCACAACTTATGTCTGGGTGTTATTCCAGGTGAGACCTCACACAAGGACACACCCGAGTCATTGCTCCGGGCTATCGTGACGGGTCTCCA-AAAATTGTGGGTGGATTCGTGCGGATGTCCAGAGTGCCTACAATGTCTTAAGGGATTGAAGGCAATTAAGCCCGGCCTTTATGAAATCCCTAGGATAATACCACACAC
s NC_006146.genome 86345 2356 + 171096 AGCAGGCACGTGGGCAGCACGGCGCTCACGTAGCTCCTCTGTCCGGCATGGCTGGAGTAGGAGGCCCTGGGCAGGGTCTTGATCAGGGCCCTCACATCCTTCACGTCATCCGTCAGCTGGCCGGTCTTGGATGAGACCATTGTCTGGAACATTTCATCGAGAACTGGATATGTGAACACCCACTTGCAAAAGGCCTTGAACTTGGAGCTTAGGAGGCCTTCCTTCTCCATCCTCATCATGTGTTCAACCACCTGCCTACCGGAGGCCATGATGGCCGCCCGGTCCACGCCTAGCACCTTGCTGTAGGTGTAGGCACGCACCCGACAGTGTTTCAGGAGCTTATACATGGCTGTGCCTATGGTGGCAGGGATCATCACCCTGTTGCTGGGGGCCTGGATGAAAAATCTGTCTGTGAGCACAATCAGGTGATCTAGCACATACCGCATCACAATGGGGCACGCGATGGAGCAAGCATCGCTACCGGCATTCTCGGCCCGTCTCCTCACCCTGTTGTTTCGGAGGATGGACCAGAAATTGCAGATGTTGAGCGTGGCCATGAGCCCGCCCCATTCTCGCCCGTGGGCCTTGGCATCATTTATAAATGCCTTGCATATTTTGTAGGATCTCAGAGTAATCTCCACGCTCCCGGCTGTAAATTCCTTGTTCAGGACGTTACAGTAGTCAGAAATCAGAGAGACCAGCTGCTTTTTTATCTCGGGAGTCAGTTTCAGGAAGTCTTCTAGGCCGTCCTTTTTAGGCCTCATGGC---TAGTAACAGAGGAAACATCAGGCCGTTAAAATCC------TTCCTCCACGAGCTCTACCTGAAGCACTATCCAGAGGTCGGCGATGTTGTACATCTTCTCAACACCAT------------CGGGGTCGACTGCGACCTCCCACCAGGCCACCCACTGCTC-ACGGCCCACAGGGGGTTGTTTTTGGCCAGGGTCCTACAGGCTGTGCAGCAGCACAGACTGCTGGAAGACGCCATCATCCCCAAGATCCTAAAGAAGCTGGCATATTTTCTGGAGCTGCTGAGCTACTACTCCCCCAAGGATGAGCAGCGAGCCATAGCCGAAGTCCTGGACCACCTCAACATGAGCCGGGACATGGGACTGGATGACAAGCTGTGGGCCCTGATCAGAACCCTGCGCCAGGAGAGGCACCACGCTTCTGTGAATGTGGTTCTGCCTGAGAGCGACTACACGGCCCTGTCCCTGCAGTACTACGAGGGCATCTCTCTGGGCATG--AGGAAGGTCGTTGC--AGATATCTGCCGAAGCGGCTATGCCTCCATGCCCTCCATGACGGCCATTCACAACCTCTCACACCAGTTGCTAATGGCCTCAGGTCCGAGCGAGGAACCCTGTGCCTGGCGCGGTTTCTTTAACCAGGTTGTTCTCTGGACAGTGGCACTCTCCAAGTTTCACAGATGCCTGTACTACAACTACATTCATGGCTCCATAGCCACCCTCTCCCAGCTGCTGCACCTTGAAATCAAGGCCCTCTGTGGCTGGATTATCTCCCAGGAGGGGATGCGCATCTTTCACCGCAACAGGCCGCTCCTCACCCTCTGGGAGAGTGTCGCCGCCGACCAGGAGGTCACAGACGCCATTCCCCTGCCTGACTGCTCTGAATACATCGACCTCCTGAAGCACACCAAACAC------GTCCTAGAGAATTGCCCCCCCATGCCATATCCATAATAAAGTCTCTTACCT---TCTGTTTGTCTAGTCTGGTGTTGTGTCCTCGATGGTATGCTATGACAAAATAGGCTGGCTGACATGGGCTATTGGGCTTTTATGAGCCA-TTGTCAGGGGCGGGACAATC----GCAATATAAAACCCAGACCATCACATGGGAGCTTTAGGCGACTCTGCATCAACATCGCTTCAGGATGA-GTGGGCAAC-----AGGAAGGCTCGGTTATTTTGGTTCCTGA-----ACATCTGGCCCGGGAGGTGTCTCAGCTATTGAGCGATTTTATCTCTGATCATGATGACGCTCTTACTGGCAGAAATATTGCAGGCAAAATCCGGCGTGTGCTGGGTC----GGGCCTCTGGGGACCATAATCTGCCTCTTCTCTCCTCCCTGTTTGCCTTATGGAATGCTCTCCCA--------GGCTCTATTAGGCAAGCTGCCAGGGAAAGGCTGATATTACCAGGCGTGCAGGCCCTGACCACGGCCTATGGCTTGTGCCGGGGGGTCATTCCGGAAGAGACATCTCCCAGTGATACACCCGAAACTTTGCTTCAGGCTGTTGTGACAGGTCTGCA-AAAATTGTGGTTGGATTCCTGCGGCTGTCCAGAGTGCCAGCGGTGTGTTAGGGGCTTAGGGGCCCTGACTCCCGGGCTCTTTGAACTACCTAAGATCATCCCTCACAC
s NC_004367.genome 76234 2335 - 149696 AGAAGGCACAGTGGGAGGATGGTACTGGTATGGCCTCTGAGACAGGCGTGGCTTGCGTATGAAGCCCTAGGTAAACCTTTAATTAGGGACTTTACCTCCATAAAATTATCAGTCAGCTTTCCCGTCTTCGAGGATACCATGCACTGAAACATATCATCCAAGTTTGGATAGGTGAACACCCACTGACAGTAAGCTTTAAACTTAGACTTTACTGCACCATCCTTAAACAGGGCAAGGAGGTGATCTACTACATTCTTCCCGGTACGTAGTATGGCTGCCCTGTCCACACCCAAAACTTTGCTGTAGGTATAACTCTTAGCCCTAACGTGTCTTAAAAGTTTGTACACCGCCGTACCAGCAGTAGCTGGAATCAAAACACGGTTACTGGGTGCCTGAATGAAAAACCTATCAGTCATCACTATAAGATGATCTAAGGCATATCTCAGAATGATGGCACAAGCGACCGAACAAACATCTCCCCCAGAGTTTTCCGTCCGACGTCTCACGCGATTGTTTCTCACAATAGCCCACAAATTACAGACGTTCAGTGTAGCGACAAGTCCGCCTAGTTCCTGCCCCCTGCTTCTGGCCTCCCCTATAAAGGTCTGACAAGTCCTGTAGGTCCTCTGTACTATTGCAGCATCTGATGCGCATAATTCCCCGTCAAGAACCTTGCAGTAGTCAGTCAGTAGTGAAGATACATTCGTCCTAGTGGCGCCCGATATCTTCACAAAGTCTTCCAACCCATCTCTCTTCGGCTTCATTG----TAACTATGGAAAAAAACCATGAGCGT--GAGTCCCACAAGTTCTTTCATAACCTGTTTTTAAAGCACTATCCAGATACCATGGATGTCATCCACCTAATTAACACTGTGCCAACAAAGCCCGGTGTTAAATGGAGCGATTCCCCTA--TGTGCATTATTCAACGTGCCACTA--------TTCTGGCCAAGACCCTACAGGTTGTACACCAACATAAACTTTCTGAGGAGACGGCAATACCAAAGATATTGGAAAAGCTAAAATGCTTCCTAAAGCTGCTGCATCATTATTCAGACCCGTATGAACAAAAGTTTATCAGGGAAACTCTGGATCACATTTCAGTTAGTCGTGATATGTTTCTTGAGTGTAACCTGTGGACCCTGGTGCGACACCTGTCCAAGATTCATCACCCGTCTAGTGTAAATGTTGAAGTAACCCACCCAGACCGGGCAGCCTGGGCCCTGCAGTACTTTGATGGC--CTGGATAGTTCTGTTCGATGCGCTGTCGCCTCTACGTTTACCGAA--GGCTACAACTCTATGCCATCTCTAACCGCTGTTGTAAATCTAGCCCAGGTTATCTTGGAAGCGTCAGCCCCATCTCATGAACCCTGCACCTGGACCAGCTTTTTTAACCAGGTAGTAATCTGGACCCTGGCACTGGATAAATTTCACAACTGCTTTTACAATAGACATATAGAGGGCTCAATAGCCTCCCTGTCTCAGCTTTTGCACATTGAACTTAAGTCCCTCTGCCACTGGATGCTCTCTGTTAACGGATTGTCCATCTTTTGTCACCGGAGACCCCTTCTTACCTTATGGGAGAGCGTGGCAGCCACCAAAGATATAACTGACATAATCCCACTGCCCGATGCAACTGAAATCCTGCACCTATTGAGACATACTAGAAACCTTATAGCTTTTGGTAATTAGTTCAATAAACCTTACCT-TGGCAATGTCCCGTTCCG---TATCCTTG-------------TGTGTCTTCTACTGTTTT---------AA-----CGGGTGATAAGAGCTG-TGACTCCTTATGAGACATTTGGGATGGGTGTGTCACTTTTAAACTATATAACAACTCAAC---AACATGCC-TCTT----CACCTATGGA-CATCATCGCTCAAAGATGACAAGCGCTACCACTAAACAAGTTTCTAGCCTTTTGACCCAGGATGGGGAGATTATACCCAAGTGGTTACTCAACTACCCAA----------ACGAGCCAAAATGG----GTCAAGGGCACTACTTTAGCAATGAGGATTATGGATTCCCTGACCCAGCAAGGCCTCAAAGAGGCAC-ATGGTCCTGTATTTTCTTACCTGTTTACTTTATGGAATCTATTACCACATGGTGCACGTCAGTTAAGCAAA-----GAAAAAGAGTTAATACGCCCAGCCGTACAGGCACTCAGTACAGCCATAGAATTGTTTGAGGAGCTATTCCCTGAAGAGTCTACCATGACCGATCCTGGCATGGTCATGCGCAGGGTCGT----ACAAGCCTTAATTGAATTGTGGGATGATGTGTGCGGCTGTCCTGAGTGTATGCACGTGACTAGAGGTCTGACCCACCTAAAACCGGGTTTGTTTCAAATACCACGCACCATACCACACAC

a score=15775.0
s NC_007605.genome 94489 331 + 171823 TAAGCAGTGTAGTCCTGTCAATCTCCTGAACATGTTGGTCCACAAGCTTGTGGCTTTACGTGGTCATGTGCAGCTTGCATACGACGCCCGTGTCCTGACGCCTGACTTTCACGAAATCCCTGACCTCGATGACTCCGATGCTGTTTTCGCACGCACCTTATTGGCAGCCTTATTTCACCTCAATATGTTCTTTATTCTCAAAGATTACATAACACAAGACTCCATGAGCTTGAAGCAGGCCCTCAGTGGTCATTGGATGTCTGCCACGGGCAACCCCCTGCCTGCAGCACCGGAAACCCTGCGAGACTACTTGGAAGCTTTCCGAAATTCG
s NC_006146.genome 88701 331 + 171096 TAAGAAATGTAATCCTGTTAATCTTCTGAACACACTGGTACACAAAGCCGTGGCTTTGGGTGGTCAGGTGAAACATGATTATGACCCACGGGGCTTAACCCCAGGCTTGGACGAAATCCCTGACCTCGATGACTCGGATGGTGTCCTCGCACGCACCTTACTGGCGGCCTTGTTTCACCTCTCTCTGTTTTTTATTCTCAGAGATTATGTAACAGGAGACTCCCAGCACCTGAAGCAGGCCCTTGGTGGCCAATGGCTAGCAGAAACCGGGGACACTCTACCGGTGGACCCACAAACACTTAGAGACTACATTGAACAGTACCGCAAAGTG

a score=8514.0
s NC_007605.genome 94820 140 + 171823 GATAATCACTTTTATCTCCCGACGACAGGGCCTTTA---AACACCTTCCAATTTCCCGAAGAGCTTCTGGGGCGCGTTGTTGTTATTGATTCCTCTTTGTGTGCCGCCAGTCACGTTCAGGACGTTATCACCCATGGTGTTGG
s NC_006146.genome 89032 140 + 171096 GATAATCACTTTTATTTCCCCACGCCGGGGCCTTTG---AACCCTTTCCACTTTCCTGAAACTCTGCTGGGGCGCATTTTGGTGACCGAGCCCAACGTGTGTGCCGCGAAGCACGTTGTCGCGTTGGTTAAACAGGGAGGCGG
s NC_004367.genome 78906 143 - 149696 GACAATCCGATTCATCACTTAAGACCAGAGCTTTTGCCCGTCCCTTTACATCGTCATGAAAAATTGAGGCGCCGCATTGAGGTGGTTGATCCTAGTTTATCCCTGGCATCTCATATTGTGTCATTAATCCACCAAGGAACCAG

a score=34487.0
s NC_007605.genome 94960 1040 + 171823 GGCGGGTGTTCCTCGTCCTCGGTTTTCGGCCCTGCCTCCGGCCCCATCCCGCGAGCCCCAGCAGACATGCTCTCAGTTAACGAGCAGAGGGAATGAAAGCTCACGGCGAAACTTGGGCCAGCCCGGGGGGACCTCCCCTGCTGTTCCCCCAGTTTGCCCCATCGTTTCCCTGACGGCCTCAGGGGCCAAGCAAAACCGCGGGGGCATGGGATCCTTGCACTTAGCCAAGCCTGAGGAAACCTCCCCCGCCGTCTCCCCAGTATGCCCCATCGCTTCCCCAGCGGCCTCCAGGTCCAAGCAGCACTGCGGGGTCACTGGATCCTCACAGGCCGCACCCAGCTTTTCTTCCGTTGCCCCAGTAGCATCTCTGTCTGGTGACCTTGAAGAGGAAGAGGAGGGGTCCCGAGAATCCCCATCCCTACCGTCCAGCAAAAAGGGGGACGAGGAATTTGAGGCCTGGCTTGAGGCTCAGGACGCAAATCTTGAGGATGTTCAGCGGGAGTTTTCCGGGCTGCGAGTAATTGGTGATGAGGACGAGGATGGTTCGGAGGATGGG---GAATTTTCAGACCTGGATCTGTCTGACAGCGACCATGAAGGGGATGAGGGTGGGGGGGCTGTTGGAGGGGGCAGGAGTCTGCACTCCCTGTATTCACTGAGCGTCGTCTAATAAAGATGTCT-ATTGATCTCTTTTAGTGTGAATCATGTCTGACGAGGGGCCAGGTACAGGACCTGGAAATGGCCTAGGAGAGAAGGG---AGAC---ACATCTGGACCAGA---------AGGCTCCGGCGGCAGTGGACCTCAAAGAAGAGGGGGTGATAACCATGGACGAGGACGGGGAAGAGGACGAGGACGAGGAGGCGGAAG---ACCAGGAGCCCCGGG---------------CGGCTCAGGATCAGGGCCAAGACATAGAGATGGTGTCCGGAGACCCCAAAAACGTCCAAGTTGCATTGGCTGCAAAGGGACCCACGGTGGAACAGGAGCAGGAGCAGGAGCGGGAGGGGCAGGAGCAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAGCAGGAGGA
s NC_006146.genome 89172  933 + 171096 GGGAGGTGTTCCTCGACCGATGCTACCGGCACTGCCCCAGGTGGCACCCCCGGAGACCGGGCGGCCATGCTCTCATGCAACGCGCAGGGGAATGGAGAGCTCACAGCGGAACTTGGGCCCGCCACTGGGGACTTCCCCAGATGTTTCCCCAATTTGTCCCGCCGCTTCCCCGGCACCCTCCGAGCCC---CAACGTCCCGG------------------------CAAGCCTG----GACTTTCGCTGC--------------------------------------------------------------------------------CCACATCCTTCTCTTGTCCCGTTGCCCCTGTAGCATCGTTGCTGGGTGACTACGAGGAGGCTGCAGTGGAGTCCTCGGACTCCCGGTCCCTACCATCCAGCGATGGGGGGATGGAGGAGTTTGAGGCCTGGTTGGAGGCCCAAGAGGCTAACTTCGACGAGGTGCAGCGGGAGTTTTCTGGGTTGCGGGTAACCGGTGAGGAGGCAGATGATGGTTCCTACGATGAGGGTGAATTTTCAGACTTGGATCTGTCTGACAGCGACCACGAGGGGGATGATGATGAGGGGGATGCCGATGGGGGTGGGAGTCTTCGCTCCCTGTATTCCCTGAGCGCCATCTAATAAACATCTCTAATTGCTCTGTTCTAGTGTGAATCATGTCCGACGGAAGG---------GGCCCGGGGAACGGCCTGGGATACACGGGTCCGGGCCTTGAATCCAGACCAGGTGGTGCATCGGGCTCCGGCAGTGGCGGAAATCGAGGACGAGGGGCCCATGGCCGTGGACGAGGACGAGGCAGAGGACGGGGGCGTGGAGGTGGAGGAGTACTAGGCGAAACTGGAGAATTTGGTGGCCACGGTTCTGAATCCGAGACAAGACATGGCAATGGCCACCGTGA---CAAAAAACGCCGGAGCTGCGTTGGCTGCAAA---------GGTGGCACTGGAG--GAAGCAGTGCCGGT-------GGTGCTGGAGGG---AACTCAAGAGGAGGTGGTGGAGCAGGAGTG

a score=0.0
s NC_007605.genome 96000 49 + 171823 GGGGCAGGAGGGGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGAGGGG

a score=242.0
s NC_007605.genome 96049 26 + 171823 CAGGAGCAGGAGGAGGGGCAGGAGGG---
s NC_004367.genome 79705 24 - 149696 CAATAGCCGGA-----GGCAGTAGGGGCG

a score=0.0
s NC_007605.genome 96075 198 + 171823 GCAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAGCA

a score=3733.0
s NC_007605.genome 96273 132 + 171823 GGAGGGGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGGGCAG--GAGCAGGAGGGGCAGGAGCAGGAGGGGCAGGAGCAGGA------
s NC_006146.genome 90105 138 + 171096 GGTTCGGGAAGAGGTGCAGGGGGAAGCGGTGGAGCAGGAGGTGGTGCTGGAGGGAGCCTAGGAGGCGGTGCAGGGG--GGAGCAGTGGAGGCAGCGGAGCAGGAGGCAGTGGAGCAGGAGGCAGCGGAGCAGGAGGCAGC

a score=0.0
s NC_007605.genome 96405 112 + 171823 GGGGCAGGAGGGGCAGGAGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAG

a score=237.0
s NC_007605.genome 96517 119 + 171823 GGGCAGGAGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAGCAGGA---GGGGCAGGAGCAGGA
s NC_004367.genome  2582 121 + 149696 GGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGG-

a score=3614.0
s NC_007605.genome 96636 119 + 171823 GGTGGAGGCCGGGGTCGAGGAGGCAGTGGAGGCCGGGGTCGAGGAGGTAGTGGAGGCCGGGGTCGAGGAGGTAGTGGAGGCCGCCG--GGGTAGAGGACGTGAAAGAGCCAGGGGGGGAAG
s NC_006146.genome 90243 113 + 171096 GGAGCAGGAGGCAGCCGAGGTAGAGGCCGCGGCAGGG---GAGGTAGTGCAGGGGGCAGAGGGGGAAGAG---GAGGAGGCGGTGG--AGGAGGCAGCCGAGGGAGAGGCCGAGGTAGAGG
s NC_004367.genome  2703 110 + 149696 GGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGGGGCGCGGTAGAGAACACAAA-----------

a score=0.0
s NC_007605.genome 96755 34 + 171823 TCGTGAAAGAGCCAGGGGGAGAGGTCGTGGACGT

a score=2365.0
s NC_007605.genome 96789 39 + 171823 GGAGAAAAGAGGCCCAGGAGTCCCAGTAGTCAGTCATCA
s NC_006146.genome 90423 39 + 171096 GGTGAAAAAAGACCGAGGAGTCCCAGTGGACGTTCATCA

a score=10526.0
s NC_007605.genome 96828 703 + 171823 TCATCCGGGTCTCCACCGCGCAGGCCCCCTCCAGGTAGAAGGCCATTTTTCCAC---------------------------CCTGTAGGGGA------------AGCCGATTATTTTGAATACCACCAAGAAGGT---------------GGCCCAGATGGTGAGCCTGACGTGCCCCCGGGAGCGATAGAGCAGGGCCCCGCAGATGACCCAGGAGAAGGCCCAAG-CACTGGACCCCGGGGTCAGGGTGATGGAGGCAGGCGCAAAAAAGGAGGGTGGTTTGGAAAGCATCGTGGTCAAGG------AGGTTCCAACCCGAAATTTGAGAACATTGCAGAAGGTTTAAGAGCTCTCCTGGCTAGGAGTCACGTAGAAAGGACTACCGACGAAGGAACTTGGGTCGCCGGTGTGTTCGTATATGGAGGTAGTAAGACC----------TCCCTTTACAACCTAAGGCGAGGAACTGCCCTTGCTATTCCACAATGT-CGTCTTACACCATTGAGTCGTCTCCCCTTTGGAATGGCCCCTGGACCCGGCCCACAACCTGGCCCGCTAAGGGAGTCCATTGTCTGTTATTTCATGGTCTTTTTACAAACTCATATATTTGCTGAGGTTTTGAAGGATGCGATTAAGGACCTTGTTATGACAAAGCCCGCTCCTACCTGCAATATCAGGGTGACTGTGTGCAGCTTTGACGATGGAGTAGA------------TTTGCCTCCCTGGTTTCCACCTATGGT------------GGAAGGGGCTGCCGCGGAGGGTGATGACG
s NC_006146.genome 90462 775 + 171096 TC---CCAGTCTTCATCACGTAGTTCTTCATCAAGTCG---TTCATCTTCCAATGGTTCTGACTCAAGTGACTTTCCAGGGTTTCCAGGGCACAGGCCACTTCCAACTTCTTTTCCTGGATCCCCACTAGGTGGTTACAGGGGAACTGATGGAACTGATGGTGGTGATGAACAACCTCCCGGAGCGGTGGAGCAGGGCCCGGGAGAAGACCCGGGAGAAGGCCCCAGTCGCCAAACCACGACCTC-TGGTGGCCGAGGCAGTGGTAAAAAGGGAGGGTGGTTTGGGAGGCGCCGCGGCGAGGGTGGCAGAGGTTTCAA---GAAGTTTGAAAACATGGCAAAAAATCTCAAGGTGCTTCTAGCCAGATGTCAGGCTGAGCGGACGAACACAACCGGTAACTGGCCATTTGGAGTTTTTGTATATGG---CCCTAAAACT----------TCCTGTTACAACCTGAGGCGATGTATTGCCTGTTGTATACCAGAGTGC-CGCCTTACGCCTCTAGGACGGCTGCCATTTGGCTATGCACCCGAGCCTGGCCCTCAACCTGGGCCCATGAGAGAGTCTACAGATTGCTACTTCATCGTATTTTTACAAACTATGATATTTGCCGAATGTGTTAAGGATGCCCTTCGAGACTACATTATGACCAAGCCACTTCCGACCTCTTCTGTTCAGGTTACAGTTATAACATTTGAGGACCCCGTGATGCTTCCTGTCTTTTTCCCTCCACACCTTCCAGCTGCGGCAGTGGCAGCGGAGGGAGGTGAGGGTGCCGAGGGAGATGACG
s NC_004367.genome 79875 640 - 149696 ---------TCTCCGT-------GCCATCACAGGGATGAA-CCCCCTTCACGGT---------------------------CCCCCAGTCCACAGCCCACCGTAAGCGAACAATCCCAACAATCACCTAGACAGC----------------------------------AAAGTCCACAAGGAAC----------ATCTCAGGGGAGTACC-------AGGCCTCAGGTGCCAGGTGGCG----C-TACTACTAGGAAACGGGGTGGAGTAAGGGGTCAGCCGGCCAAGTGCCATGG------------------------CAAGTATACGACCACCGCCGAAGGGCTTACAGCCCTACTAAACCGCAGACATTCTCCTAGAACCAGTAACGAGGGTCGGTGGATGAACGGTGTA-------ATGG---CCGTCAACTTAAGCAAGTGGCCCCTATATTCCCTACGCCG-CGCATTGGCCCTTGCGGCCAACGAAGTACGCATCAGCCCTCTTTTTCGATTGCCCTATGGGAGTGCCTTTGGTCCCGGCCCACAACCTGGCCCCATATTGGAGTCCAGTACATGGGGCTTTTTAGTCTTTACTCAAACTAGTCTCTTTGCGGATGATATAGCAGATGCTATAAGGGACTATTGCACTACTCACCCCGGACCAACTCGCAACACTCAAGTAGTTTTAATGAACTTTGAAGGGAGTGGAGT------------CCCCCTTCCCATGTTTTTCCCTCCGGG------------TGAGGAGACTGAAGAGCAGAGGGAAGGTG

a score=6127.0
s NC_007605.genome 97531 84 + 171823 GAGATGACGGAGATGAAGGAGGTGATGGA---------GATGAGGGTGAGGAAGGGCAGGAGTGATGTAACTTGTTAGGAGACGCCCTCAATC
s NC_006146.genome 91237 93 + 171096 GAGATGAAGGAGGTGAGGGAGGTGACGGAAATGAAGGAGATGAGGGTGCGGCGGGGCAGGAGTGATGTAACTTATTAGGAGACGCCCTCAATC

a score=176411.0
s NC_007605.genome 97615 1315 + 171823 GTATTAAAAGCCGTGTATTCCCCCGCACTAAAGAATAAATCCCCAGTAGACATCATGCGTGCTGTTGGTGTATTTCTGGC-CATCTGTCTTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTG----GGCATACCCATGTTGTCACGTCACTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTACCTGGTGAGCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAATGGGAGCAACCAGCTGGTCATCAGCCGCTGCGCAAACGGACTCAACGTGGTCTCCTTCTTTATCTCCATCCTGAAGCGAAGCAGCTCCGCCCTCACGGGCCATCTCCGTGAGTTGTTAACCACCCTGGAGACTCTTTACGGTTCATTCTCAGTGGAAGACCTGTTTGGTGCCAACTTAAACAGATACGCATGGCATCGC---GGGGGCTAGACCTCTGGCTGGATGAGCACGTGTGGAAGAGGAAACAGGAGA----TTGGTGTGAAAGGAGAAAATCTGCTTCTCCCCGACTTATGGCTAGATTTCCTACAACTCAGCCCCATCTTCCAGCGCAAGCTTGCTGCCGTTATTGCCTGTGTCCGACGCCTGCGGACTCAGGCCACCGTCTACCCAGAGGAGGACATGTGCATGGCCTGGGCCCGCTTTTGCGACCCCTCTGATATTAAGGTGGTTATTTTGGGCCAGGACCCCTATCACGGGGGTCAAGCAAACGGCCTGGCATTCAGCGTCGCATACGGCTTTCCAGTTCCCCCCAGCCTGAGGAACATCTACGCGGAGCTGCACCGGAGCCTGCCGGAGTTTTCTCCCCCAGATCACGGCTGTCTAGACGCGTGGGCCTCCCAGGGGGTGTTGCTACTCAACACCATCCTGACCGTGCAAAAGGGCAAGCCCGGCTCGCACGCAGACATTGGCTGGGCGTGGTTTACTGACCACGTAATTTCATTGCTCTCTGAGCGGTTAAAAGCGTGCGTGTTTATGCTGTGGGGTGCGAAGGCGGGAGACAAAGCTTCACTAATCAACTCCAAGAAGCATCTGGTTCTGACCTCTCAGCATCCCTCTCCCCTGGCCCAGAACAGCACCCGAAAGAGTGCCCAGCAGAAGTTCCTGGGCAACAACCACTTTGTCCTCGCTAACAACTTTTTGCGTGAGAAGGGGCTCGGTGAGATAGATTGGAGGCTGTAGAGGGGTCATCACTATGGCCATGTTTCTGAAGTCGCGTGGGGTCCGGTCTTGCAGGGACCGGCGCCTCTTGTCGGACGAGGAGGAAGAGACTTCACAGA
s NC_006146.genome 91330 1310 + 171096 GTATTAAAAGCCATGTATTCCCCCGCACTAAAGAATAAACCCCC--TTGCCATCATGCGTGCTGTTAGTGGGTTTCTGTC-CGTCTTTCTCGCTGTCATTTTTGTCCTCCCCACGTGGGGCAACTG----GGCCTACCCATGTTGTCATGTCACTCAGCTCCGCGCTGAACACCTCCTTGCGCTGGAAAACATCAGCGACATTTACCTGGTGAGCAATAAGACCTGTGATGGCTTCAGCCTGGCCTCCTTAAATTCAGCAAAGAACGGGACAAGTCAGCTGGTCATTAGCCGCTGTGGAAACGGACTCAACGTGGTCTCCTTCTTCATCGCCGTCCTGCAGCGCAGCAGTTCCGCCCTCACAGTTCAGCTCCGTGAATTGTTAAACACCCTCGAGAGTATCTACGCCTCCTTCTCGGTCGAAGACCTGTTTGGGGCCAACTTAAACAGATACGCATGGCGTCAC---GCGGGCTAGACCTGTGGCTGGAGGAACATGTGTGGAAGAGGAAACAGGAGA----ATGGTGTCAAAGGTGAAAATCTGCTCCTCCCCGACCCATGGCTTGATTTCCTGCAGCTCAGCCCCATCTTCCAGCGCAAGTTGGCAGCCGTCATCGCATGCGTCCGGCGCCTGCGGACTCGGACCATCATCTACCCAGAAGAGGACATGTGCATGGCCTGGGCTCGCTTTTGCGACCCCTCCGATATTAAGGTGGTTATTTTAGGCCAGGACCCCTACCACGGAGGACAAGCAAACGGCCTGGCATTCAGCGTAGCATATGGCTTCCCGGTCCCCCCCAGCCTGAGGAACATTTATGCGGAGCTGCACCGGAGTCTGCCGGAGTTCTCTCCCCCGGATCACGGCTGCCTGGACGCGTGGGCCTCCCAGGGAGTATTGCTGCTCAACACCATCCTCACTGTGCAAAAGGGCAAGCCTGGCTCACACGCTGACATTGGCTGGGCGTGGTTTACTGACCACGTAATCTCATTGCTCTCTGAGCGGTTAAAAGCGTGCGTGTTTATGCTGTGGGGTGCGAAGGCAGGAGATAAAGCCTCACTGATCAACTCCAAGAAGCATCTGGTTCTGACCTCGCAGCACCCCTCTCCCCTGGCTCAGAACAGCACCCGCAAGAGCGCACAGCAGAAGTTTGTGGGCAACAACCACTTTGTCCTCGCCAACAACTTCTTGCGCGAGAAGGGTCTCGGTGAGATAGATTGGAGACTGTAGCGG---CGCCGGGATGGCCATGTTTCTAAAGTCTCGCGGTGGGAGGTCCAGAAGGGCCCAGCGGCTCCTATCAGAGGACGAGGAGGACACCTCCCTGG
s NC_004367.genome 80774 1284 - 149696 GTATTTAAAGCTGTCTGTTAAAATGCCT-----AATAAACACTGACAATGCATCATGCACTCTGTTG-------TCTGTTGTGCACGTGTTGCC-TCGTTTTCGT-GTCCCACGGCGCGTCAAATGTCCCGGCTATGCCGTGCTGTCACGTCGATCACTTACGTGAGGAGCATAGTCTACCTTTGAGGAACATAAGTGACATATACCTGGTGAGCAATAAAACATGTGATGGATTCAGTCTAGCCACTTTAAATTCTGTCAAGCAGGGCAAGAACCAGGTGGTAATTACCAGATGCGCTAATGGGTTTAACGTGGTCGCTTTTCTACGCGCACTGTTACAGCGTCCCGAGGAATCTCTCCCAAGTAAGCTTAAGGAACTACTGGCGGCTCTGGCTGCACTACATCTGTCTTTCTCTGTAGAAGATCTCCTCTCCGTGGATTTGTATAAATACAGATGGAGTATCAGGAGGGGCTCGATGCGTGGTTAGAAGCAAATGTCTGGA----GCCGCAGGAGGCCACATGCAATACATGGAGAACACCTGTTGCTTCCAGATCCATGGCTAGATTTTTTGTCCCTGACTCCAATCTTACGGAGAAAACTTCAAGCTGTCATTAACTCTGTGCGCAGGCTTCGCCAGCAAGTAACTATTTACCCAGATGAGGACATGTGCATGTCATGGGCACGCTTCTGTGACCCGTATGAAGTGAGGGTCATTATTCTAGGACAGGATCCTTATCACGGTGGACAGGCAAACGGCCTAGCCTTTAGCGTAGCCTACGGATTTCCCATACCACCTAGCCTGCGAAACGTATATGCGGAACTTGAAAGAAGCATTCCAGAGTTTAAAGCTCCGGACCACGGGTGTCTTGAAGCCTGGGCCTCCCAAGGTGTTTTGTTGTTGAATACAGTTCTGACTGTAGAGAAGAGTAAGCCTGGCTCACACTCTGACATAGGCTGGACGTGGTTCACAGACCACGTCATTACGCTTCTCTCAAACAATTTAAAAGCCTGCGTCTTTATGCTCTGGGGTTCAAGGGCAGGTGATAAGGCTTCAATTATAGATACTAGAAAGCATCTGGTCCTGTCCTCGCAGCATCCATCTCCACTGGCACAAAACAGTACCAGGCGGGGGACACAGCAAAAGTTTATCGGAAACAATCATTTTGTAGAGGCAAACACATTCCTACGACAGAAGGGTCTTGGAGAGATTGACTGGCGCTTGTAG------CCTGCCCATGGCGATGTTTCTACGGTCT----------------GCGAGAATACGCGCCTC-TGCCG--CGGGGAGAATGAATACGCGCAGA

a score=21179.0
s NC_007605.genome 98930 471 + 171823 GCAGCAGCTACACTCTGGGGTCTCAGGCCTCCCAGTCTATCCAGGA------------GGAGGACGTGAGTGACACTGATGAGTCTGACTACTCAGATGAAGACGAGGAGATTGATTTGGAGGAAGAGTACCCCAGTGACGAAGACCCATCTGAGGGCAGTGATAGCGACCCCTCGTGGCATCCTTCAGATTCAGACGAGTCTGACTACAGCGAGAGCGACGAGGA---TGAAGCAACCCCCGGCTCTCAGGCCTCACGATCTTCAAGAGTCTCGC---CATCTACCCAACAGTCTTCAGGTCTGACACCCACGCCTTCGTTCTCCCGACCACGCACCCGGGCACCTCCGAGGCCGCCGGCTCCCGCGCCGGTCAGGGGACGGGCCTCAGCACCTCCCAGGCCACCAGCCCCAGTTCAGCAATCCACCAAAGACA-----------------------------------------AGGGT---------CCCCATAGACCTACGCGACCTGTACTTAGAGGCCCAGCTCCACGCCGCC
s NC_006146.genome 92640 537 + 171096 GCAGCGGCTACACCCTGGGGTCTCAGACCTCTCAGTCAACCCAGGATGAAGATGAGGAGGAAGACCTGAGCGAGACAGAGGAGTCTGAGTACACAGACGATGATGAGGAGATTGACTTGGAGGATGAATATTCCAGCAACGAAGACCAGTCGGAGGGCAGTGACAGCGACCCCTCGTGGCGTCCTTCGGATTCAGAAGAATCCGACTACAGTGAGAGCGACGAGGAAGGTGAAGGGGCCTCTGCCTCTCAGGCTTCCCTGTCTTCCAGGGCCTCGCAATCCTCCACCACACCCACTTCGAGCACTACAACCACCCCATCCTTTTCTCGGCCACGAGCCCAGGTACCTGCTAGGCCACCACCCCCCGTGCTGTCCAGACAGAGAGGACCGGCACCTCCAAGGCCACCGGCTCCGGCCCAG--ACCAAACAGCGACCCCCGGCACCTGCGAGGCCGCCCGCCCCTGCGCCTGTTAAGCAGCGTGCTCCGACCCCTCCTAAACCCCCGAGACTTACGCTCAAAGTCCCACCCCCCCGCCGCC

a score=731809.0
s NC_007605.genome 99401 5101 + 171823 [encoded data, 5229 characters]
s NC_006146.genome 93177 5103 + 171096 [encoded data, 5229 characters]
s NC_004367.genome 82466 5102 - 149696 [encoded data, 5229 characters]

a score=119801.0
s NC_007605.genome 104502 2141 + 171823 CTGAGAACAGTCATCAGTAAATCTGTCTCTCGCGTGATTTCCATAGGAATGGTGTAGCCGGGGTGGAGGGCCGATATCACATCAAGCAGAAAGGCCATAATCTCTCGAAAGTAGGCGGTGGGGCTGAGACCATGCTCAGTGGCCGTCTGGCAGGGGGCCGGGCGCGCTCCGTCCTTGTCCAGGAGACACACGTGGCTTCCAGAGAGGCGCAGCC---CAGCCCTCCGCAGCCGCTGAAGCCAGGCTCGCGGAAGAGCCCAAAACCTGTTTCGGCGCCGCCCGGGGGCCAGTCTCCGGGTCAGGTCGCGGACCAGGGTCAACAGGTGGTCGTGGGATGGCGGGGCCTTGTCTGCCTCGGGTCTCG---CCGCTAGTTGGTCCAGGGTCCAGGAGAAGGCTTCGTGCCAAACCAAAAAGGGCCCCGAGTGCTCCCTACATCCACCCACGTAAAGATCCCCCTGAAAGATGGCCATCAGTAGGCACCCGGGCCCGCGTCGAGCCTTCACCCGAA-----TGTGTCTGCGGGCCACGGTGGCCTCTCCACCCATCACATCCCGGTCGAGCCGGCT---GGCATCCTCCGAGTCTTTCACGCCTTGCAGGAAAGCCTAGGAGATACAGCAACAGAAAGCTATTAGCCGGTGGTTCCCCCACCATCATTCTTCCTGTTAACGGGAAGAATAAGAGTTGGGCAAACCCCGGGGGCCGCGCTCTCCCACCCAGCCCCGCTTCTCACCTGTGCTAGTGGCTCCTCTGAAGGATGGGCGGAGGTTGGTGCCACAAAGCCCAGGATGAACTCGTCTGCATAAGCCCAGGTCAGTCCTAGGTCAGCGGCCGCGTGTAGGAGAACCCGGGTGACGGCGGTGTAGAGGCCCCCGAGTGCCCGTCGCGTGTCTGAGGTGCCATAGCGGTGAAGGGCCCGCAGCCAGGTTTGCGCGTCCCGCGCCTGCCCTCCGCCATCAGGCGTTCCCACGGGGGCGCCCCTGGCAGAGAGGTGGCAGCGGGCCAATTCGTAGAGCCACCAAGTGGCATCAGCCTCAAGGATGGCTGTGGCCTCCGCGCGCCCGACCACCGTCGTCTCGTCCTCCCCCCCTCCCTCGCCGCCTTCCCGCGTGCAAACGTGGCGAGGGTTAATCTCCTTTCGGGTCGGGGGCCAGATTTGTTGTAGGAGCAGCG--AGCCG-----------CGTCGTTGCCCTGACCGCGCGTCGAGGCCCAGGAGGGCGTCTGCCAGGGGCGTCCCAGAGACTCCCAGGTTCAGGTCCAGTAGCAGGAGACCCTCGCTGTGTGGCGCCCGGTGCCAGAAGGCCGGCCTCGCCCGTCCCACATAATGGATGGGCAGGAAGGGAAAGCCCGGGACATAGGGCTGGAAATCTGAGCCCCCTGGGCAGAGTTCGGGGTCCAGGAGGTAGAAGATGGGCTTGGTGCCTCTGTGGTTGGCGTAGCAGGAGGCATAGATACTGCGGAGGAAGGCGTAGAGCCCGCCCCCGGCCATACTCCAAGAGTTGACAAGCCAGGACTCGAATCCCCCAGCCGGCTCAAGAATTTTCAGGCTGACGCGGTGCCGTCGGGCGTCCCCACCACGGCCGGTGGCCCCGTCGGACGACACCAGATCTACTTCATAAGTGACCGGTCGCAGGATGTCCCTAAAGGGGACGGGAGAGGGGTCGTCGGGAGTCTCGGTGGAATAGGTGAAAACATCCCCACGCGGTGTCCTGATGTATACGTCCAACTGTCCGGGAGACTCAGAGTGCCTCTGAGCATGGGGGCATGT--------------CTGTTCCC-------------CCTCCATCTCGGA---CCCGAAGCCATCAACAGGTGGGGGTTGTTGGTCCCGCCCATCATCCCCCG---AGCAGCTTTGGCAGACCACCTGTGCTGGAAAGAGAGGCTGGAAGATGAGGCCCTGCTCATCCTCCACCCTGGCGGCGGACAAGAGTCTGCGGTCTCGGGTTCTAAATGAAAGGTCAAATAGGTCCTTCTCGGCGGCATCGGCGAGCATAGCAATGAGCCCCCCGCTGCGCCTGAGCTCCCGCTCCCATCGCAAAAAGTTGAGTTCGGTAGTCGAGGGCGCGTTGACCACGGGGGGCTCCAGGGAGCCTCCAAGCGGCGGCTGGCAGGCCTGCACCACGATCAGAGTCTCAACGTCCTCCCTTTTGATGGGCACG
s NC_006146.genome  98280 2168 + 171096 CTGAGAACCGTCATCAGTAAATCCGTCTCTCGCGTGATTTCCAGGGGCATGGCGTAGCCGGGGTGCAGGGCGGACAGCACGTCCAACAGAAAGGCCATAATCTCCCGAAAGTAGGCGGTGGGGCTGAGGGCGTGCTCCGTGGCCGTCTGGCACGGGGCCGGGCGCGGCCCGTCCCGGTCCAGGAGACACACGTGGCTCCCCGAGAGCCGCAGCCGTCCGCTCCTCCGCAGGCGCTGCAGCCAGGCACGGGGAAGCGCCCAGAACCGGTTTCGGCGCCGCCCGGGGGCCAGTCTCTGGGTCAGTCCGCGGACCAAGGTCAGCAGAGACTCCTGTGATGGAGGGGCCCCACCCGACTCGGGTTTCGTCGCCGCCAGCCGGTCCAGGGCCCAAGCGAAGGCCTCATGCCAGACCAGAAAGGGGCCAGAATTCTCTCCACGACCACCCACGTAGAGATCCCCCTGAAAGATGGCCATCAGCAGACAGCCTGGTCCCCGT---GCCTTCACGCGCAGTGGGTGGGGCCGCTGGTCTC--CCGCCCATCCGGCCGCCGCGTCCTCGTCGACCCGCATCTCGGCCTCCTCCGCATCTTGCACGCCTTTCAGGAATGCCTAGAGAGTAGACACGAGGGATGCCATTAGCCGGAGGTTCCAC-GCCACCATTCCACCCGTTAACGGGAAGAATGGCGGCGGGGTG-----CCTGCGCCGAGTCACCACCCACTCCCCCGCTACTCACCCGCGCCAGGGTCTCCTCCAAAGGATGGGCGGAGGTCGGCGCCACGAAGCCCAGGACAAACTCGTCGGCATAGGCCCAGGTCAGGCCCAGGTCAGAGGCCGCGCGCAGGAGGGTCCGCGTGACGGCCGTGTAGAGGCCCCCCAGGGCCCGGCGGGTGTCGGCGGTGCCGTAGTGGTGGAGGGCCCGCAGCCAGGTCCGCACGTCCCGCGCCTGCCCTCCGGCCTCAGGCGTCTCCACAGGGGCTCCAGCGACCGGCAGGTGGCGGAGGGCCAGCTCGTAGAGCCACCAGGTGGCGTCCGCCTCCAGGGAGGCCGCGGCCTCGGCGCGCCCGACCACCGTC---TCGGGCTTCTTCCTTCCCTCGCCGCCTTCCCGCACGCAGACGTGGCTGGGGTTAATCTCCCGCCTGGTCAGGG-CCAGACCTGCTGCGGAAGCCGCTCTGGCTGTCTGTCGCAAGCGTCGGCGCCCGGGCCGCGCGTTGAGGCCCAGGAGCGAGTCGGCCAGGGGGGTGCCGGCAACGCCCAAGTTCAGATCCAGGAGCATGAGGCCCTCGCTCCTCGGCGCCAGGTGCCAAAATGCCGGCCGCGCCCTTCCCACGTAGCGGATGGGCAGAAAGGGGAAGCCGGGAACGTAGGGCTGGAAGTCCGAGCCCCCGGGGCAGAGATCGGGGTCCAGGAGGTAGAAGACGGGCTTGGGGCCGCGGTGCTCTGCGTAGCACGAGGCGTAGATGCTCCGGAGGAAGGCGTAGAGGCCGCCCCCCGCCAGGCCCCAGGAGTTGACCAGCCAGGACTCGAAGCCCCCGGCGGGAGTGAGGATCTTCAGGCTGACGCGGTGCT--------------CCGAGGACG-CGGACCCATCGGAAGAGGCCAGATCCACCTCGTAGATGGCGGGGCGCAGGATGTCTCGGAAGGGCACCGGCGAGGGGGTGTTCGGGGCCTCGGTGGAATAGGTGAAGACGTCCCCGCGCGGCGTACGGATGTAGACGTCCAGCTGATCCGGCGCCTCTGC---CCCCCGGGCGCAAGAGCGGGCTCCGGGTCGCACCCCCGCTCCCGCCTCCTCCGCATCATCTGTCTCAAAGCCCCCTGAGCCGCTGGGCGGTGGTTGTTGCTGACATCGCCCATCTTCCCCCGGGGAGCAGCCCTGACAAACCACCTGCGCCGGGAAGAGGGGCTGGAAGATGAGGCCGTGTTCCTCCTCCACCCGGACGGTGGACAGGAGTCTGCGGTCCCGGGTTCGAAAAGTCAGGTCAAAAAGATCCTTCTCGGCGGCGTCCGCGAGGGGGGCAATAAGCCCCCCGCTCCTCCTGAGCTCCCGTTCCCAGCGCAGAAAGTTCAGCTCCGTGGCAGTGGGGGCGTTCACGCACGGGGGCTCCATGGAGCCTCCTAGCGGGGGCTGGCAGGCCTGCACCGCGATCAGAGTCTCCACATCCTCCCCCCGGACGGGCACG

a score=155628.0
s NC_007605.genome 106643 1216 + 171823 ATGCCCACGACCCAAATCGCCCACCACCGCCCTGCGGTCTGGGTA--ACATTATAAAAGGTAACCGAGCTGACGCGGGCCCTGACGCTC------TCCGCGGGTGTTTCCATCATT----GTTTGAGATCTGAGGA---GGACTGGACCCTTTAAAACATC-------CGGTCACGCCCTTTGCAAATTATTTAAAAGGTGAATGC---TCAACTGAGA----------------CCATCGCAATCATGAAGTCCTCCAAGAATGACACGTTCGTCTATAGAACGTGGGTCAAAACGCTTGTTGTGTACTTTGTGATGTTTGTCATGTCGGCGGTGGTCCCCATCACCGCCATGTTCCCCAACCTGGGGTACCCCTGCTACTTTAACGCACTGGTTGATTACGGGGCACTTAACCTGACCAATTACAACCTGGCCCACCACCTGACCCCCACGCTCTATCTGGAGCCGCCGGAGATGTTTGTCTACATCACACTGGTCTTTATCGCGGACTGCGTGGCTTTCATCTACTACGCCTGCGGCGAGGTGGCGCTAATCAAGGCCCGAAAAAAGGTCTCGGGTCTTACAGACCTCTCGGCCTGGGTCTCGGCAGTGGGCTCCCCAACCGTGCTGTTTTTGGCCATCCTCAAGCTCTGGTCCATACAGGTCTTCATCCAGGTCCTTTCCTACAAGCACGTCTTTCTCTCGGCCTTTGTGTACTTTTTGCACTTTCTGGCCTCAGTTCTACACGCCTGCGCATGTGTGACCCGCTTCTCCCCGGTCTGGGTGGTCAAGGCCCAGGACAACTCTATTCCCCAGGACACCTTCTTGTGGTGGGTGGTCTTCTACCTGAAGCCCGTAGTTACAAACCTGTACCTGGGGTGCCTTGCCCTGGAGACGCTGGTCTTCTCGCTCAGCGTGTTCCTGGCCCTGGGCAACAGCTTTTACTTTATGGTGGGGGACATGGTGCTGGGAGCCGTGAACCTCTTCCTCATCCTGCCCATCTTCTGGTACATTCTGACGGAGGTGTGGCTG----GCCTCCTTCCTGCGGCACAACTTTGGCTTCTACTGCGGCATGTTCATCGCCTCCATCATCCTGATCCTGCCCTTGGTCAGGTACGAGGCCGTCTTTGTCTCCGCCAAGCTGCACACCACTGTGGCCATCAATGTGGCCATCATACCTATCCTGTGCTCGGTGGCCATGCTCATCAGGATATGCCGG---ATTTTCAAAAGCATGCGCCAGGGCACTGACTATGTCCCT
s NC_006146.genome 100448 1214 + 171096 ATGCCCACAACCCATATACCCCACCACCGCCCTCCGACCTGGGTA--ACATTATAAAAGGTAACCGAGCTGACCCGCGCCCTGACACTC------TCCACGGGTGTTTCCATC--------TTTCACAGCCGAGGACGAGGACCGG-CCTTTTTAAACATC-------CGGTCACACCCTTTGCAAATTATTTAAAAGGCGAATGC---TCATCCCGGA----------------CCATCGCAATCATGAAGTCCTCCAAGAATGACACGTTCGTCTACAAGATATGGGTGAAAACGCTCGTGGTGTACTTTGTGATGTTTGTCATGTCGGCCGTGGTCCCCATCACCGCCATGTTCCCCGACCTGGGGTACCCCTGCTACTTCAACGCGCTGGTGGACTATGGGGCCCTGAACCTGACCCAGTACAACACGGCCCACCACCTCACCCCCATGCTCTATCTGGAGCCTCCAGAGATGTTTGTCTACATCACGCTGGTCTTCATCGTGGACTGCGTGGCTTTCATCTACTACGCCTGTGGGGAGGTGGCACTGATCAAGGCCCGCCGGAAGGTCTCGGGTCTCACGGACCTGTCGGCCTGGGTCTCGGCCGTGGGGTCCCCGACCGTGCTGTTCTTGGCCATCCTCAAGCTCTGGTCCATCCAGGTCTTCATCCAGGTCCTGTCCTACAAGCACGTCTTCCTCTCGGCCTTCGTCTACTTTCTGCACTTTCTGGCCTCGGTCCTGCATGCCTGCGCCTGCGTGACCCGCTTCTCGCCGGTCTGGGTGGTCAAGGCTCAGGACAACTCCATCCCCCAGGACACCTTCCTGTGGCAGGTGGTCTTTTACCTGAAGCCGGTGGTCTCCAACCTTTACCTGGGCTGCCTGGCCCTTGAAACGCTGGTCTTCTCCCTCAGCGTGTTCCTGGCCCTGGGCAACAGCTTCTACTTTATGGTGGGGGACATGGTGCTGGGGGCAGTCAACCTGTTCCTCATCCTGCCCATCTTCTGGTACGTGTTGACGGAGGTGTGGCTG----GCCTCCTTCCTGAGGCACAACTTTGGCTTCTACTGCGGCATGTTCATCGCCTCCATCATCCTCATTCTGCCCCTGGTTAGGTACGAGGCGGTCTTCGTCTCGGCCAAGCTGCACACCACGGTCGCCATCAACGTGGCCATCATCCCCATCCTGTGCTCGGTGGCCCTGCTCGTCAGGATATGTCGG---ATCTTCAAAACCATGCGCCAGGGCACTGACTACGTCCCC
s NC_004367.genome  89898 1244 - 149696 ATGCGTACGATCCATATCGCCCACCAT--CTTTTGCACCTGGCCACCACATTGTAAAAGTGTACAGACACAATATTGGCTACAACATGCGTTACGTCCGAGGCCATTTCCTCCACTAATGGTTTCACCCTC-----CTCGCACC---CCTTCCAACTCACCATTGGAATGTTCCCAACCCTTGTCCATTATTTAAAAGTTACGGGCCAGTCATCTGTCAGAATCAGTTACACATCACATCGGCACCATGAAGTCTTCAAAGAACGATACCTTCATTTATGGAATATGGATCAAGTTACTAATTGTATATTTTGTGATGTTTTTCATCGCCGCAGCAGTCCCCATCCTAGCGTCATTCCCAAATTTGGGATTTCCATGTTACTTTAACGCAGTGGTGAACTACAGTGCCCTCAACCTATCCGAATATAATGTCATGAATCACATCACACCGACCCTGTACCTAGAACCACCGGAAATGTTCACCTACATGTTTATTTCATTTATGTCCGACTGTGTGTCTGCCATCTACTACGTATGCGCCGCGGTGGCGATGTATCTTGCCAAGAAACAGGTATCCGGCCTAACGGATCTCTCATCGTGGATTAATTCGGTAGGTTCCCCAACTGCCCTGTTTCTTTGCATCCTGAAAATGTGGTCTATCCAGACCTTCATCCAAATCCTGGCATATAAGCACCTATTTCTTTCTGCATTTATCTATTTCTTACATTTTGTGAGCTCAGTGATTTATGCGACTGTATGCATCACCAGGATGTCACCAATCTGGATCATCAAGACACAGGATTCATCAATTCCAAGGAACACTTTGTTATGGCGCGTTGTATTCCAATTTAAGCCTATAGCGACAAACTTTTGCATGTTATGTTTAGCTTTGGAAACTCTGGTATTTTCACTAAGCATCTGTCTCGCCATTGGAAACAGTTTTTACGTGATGGTAGCCGATGTGGTGCTTGCCGCCATTAACTTATTTGTGCTGCTTCCATTAATTTGGTATATCATCACAGAGGTCTGGCTGCATAAGTTTTTCCCTCATCCATA----TGGATTCTATATAGGTACACTCATAGGATCCATAATATTAGCACTGCCTCTCATACGTTACGAGTCGATTTTTGTTTCAGCTAAGCTACACAGCACCATTGCCGCCAACATCTCTATAATCCCAATACTCGGATCCATAGCCCTTATGATCAGGGT-TGTCAGGTCATTTCTAAAAA-----ACAAAGACACTGAATACAGCCCC

a score=14489.0
s NC_007605.genome 107859 604 + 171823 GTCTCGGAGACGGTGGAACTGGAGCTAGAGTCAGAGCCGAGGCCTAGGCCCTCGCGCACGCCATCACCCGGGCGCAACCGCCGCCGCTCTTCTACGTCCTCATCTTCCTCCAGGTCAAC---CAGGAGACAGAGGCCCGTCTCTACCCAAGCCCTCGTCTCCTCCGTTTTACCGATGACGACGGACAGCGAGGAGGAGATCTTCCCCTAATGCAATAAAAACTTAAAACACTGAGGTTACTTTCCCGTCATTCTTTCGGGGGAACGAGGGGAGGCGGGAATTGGGTTAAGATAGGGGCGAAGG--GTGGGGGTGGGTGCAAGAA---TTGGGGCTGGGAA--------------TGGAG---AGGGGAGTGGGCTAGGTGCCGACA------CCGGGGTGCCAAGATAATGGATTGAG---TAAGCATGGGGCTCTGATCGGGTCC---GCCGGGTTCTCAGGGGTGTAGT--GGGTGGGCATTGCATATTTTTGCCGCGGTGCTGTTGGGCCTTGGACTCGGGGTGATCATCCGTA-CCATCACCCGCACCCGCACCCCAG-------TCCACAGCCACCGGCCAAGGTCCT------GGGCCTCCCA----CCACCGTTAT----GCCTCCCCCTTTACCCATTAATTACAAGAGAT----GTTAGT
s NC_006146.genome 101662 653 + 171096 ATCTCCGAGACGGTGGAGCTGGAGTTGGAGCCAACGACGAGGCCCAGAACGAGGTCCTCGTCTTTACGCGGTGGCAACGGCCGCCGTTCGTCCACCTCCTCCAGCTCCTCCAGGTCATCGTCCAAGAGACAGAGGACGGTCTCCGCCCAAGCCCACGTCCCCTCCGTTTTACCTATGACATCAGACAGCGAGGATGAAATCTTTCCATAATTCAATAAAG-TTTGAAACTCAAAGGTTGCGTTACCGTCATGCTTTCGGGGTAACGAGGGGAGGCGGAAATTGGAGCAGGGTTGGGGAAATGACAATGGGGTCCCTAGCACGGAAATTCAGAGTTGGGAAAAGGCGCCCAGGTCTGGAGCTGAAGGTTTTGGGCTCCCTATCAGCGGCTCTGCCCTGCCCCCTGGCTAGGGGCTCCGGGCTCTGGCTAGAGGCTCTG----GCTCCCTTGCTAGGGGCTCTGGGCTGTCTCCCGGCTAGGGACTGGAACTTGCTGTCAGTGGGTTGTTGTG--------TGGGGGCAAGCACCAGTGGCCAACATAC---TCCGGGTTCCATGTGTGTTCCCACTGCCATCCACCCAGCCTTTTTTGCAGGGCCTAACATCTCCCCCCTTTATTAACACCTCCCGTTTTCCCCTTTCACCACAGGAAACAAAAGTCAGT

a score=236087.0
s NC_007605.genome 108463 1591 + 171823 TTGGTTTTTTATTTGG-CAAAAACAGCAATTCATCATTTTCAGAGTCCTCATCATATTCGAGCCCCTCGTTGGTTTCCCCGCAGGCCCTCCCTTCTTCGGCCGCTATTAGCTTAGTAGTCTCCAGGTTAAACTCCTCATAGTCATTATACAGGTTGATTATTCCCCCGTCCACGTCGCCTATGGAGTTGACTCGTCGTCGGCAAAGAGACCAGAGGGCACCCATGGCGCGGTGTCAAAAGTATTGTCTGCGTACGCTTTCCAGGAGCCAGCCGCGGTGCTCAAGGTCTTACGGATGACAGAGTCCGGCAGGACCACGGGTGTCACCAGCACCGCCACGGGAATCTCCACCGAGGCGTCCAGAAGCAGGTCTGAGCCGAGCGTGCAGGTCGCCGGGTCTAGAGGCGACCGTTTTCGAAAGAAGGCCGTCACAATGTTCACCCGGGGTGAGCAGTC--TCTCCCGGGCTTGCCACCCCCACTGTGGCGGACGTAGTCTCCAACAATTTTGTATTGGAGGAGCACCTGGTAGAAGTAGTTGTGCCGTGGATTGATGAAGATGTTGACTGGGACCCGGTCTTTAATACCAATGCGCCCCGCATTTTCGCTTGGGTCCGTCATTACGTAGAGCATAGACTCCACCCCCCTGTTGGCAGCTAGGCTGTCTGCCACCAGGTCATGACCGGGGCCCAGTTTGCGCTTACGGACATCTTTAAGATTCCAGGCCTCATCCTGCGTCAACAGATAGTCACCCTCCGAGGGCAACCGCCCATCCGGGACGTACTCCACGGTAGGACGAGCTATAGAATTGATAAATCTGATAAATGACCTCTTGCATGGCCTCTTGTAAAGCGCAGTGTAGGATGGGTAGATGGGGTCAAATTCTGACTTGGAAAAGAGGTACTTGAAGCGGCACTTAATCTCATAAATGCAGCTCCGGTCGGTGAACAGTATAAAGTCTCCCTGTGACTCCACATTGACGCAAAGATCCAGAGACACCCCAAAAATGCCATCCGTGGGACTAATCATAAAGCCAAATTGACGGTTGGCGGATGCGTCCCCGCAGATGAGCTTACAGACAATGTCCTTGACCGTGTCCTCACACCGCAGGCCAAAGGCCACAGGTCCCCCAAAGTAGTGATTTGTGGAGATGGGAGCTGGCTCAAACACCTTGGTGGGTCCATTCTTAATGGTGGAGAGCAGCTTGGAAGAGGAAATTATGCCATTTCGCAATATGTCCCACATCAGGTTCTCAGACTGCCCCCTGGTCATGGACTCCACGTACGAGCAGAGAACAGTCCTCTGCTCGTCGGTGGCCTCCTGTAGCCCCCAGTAAATGGATTTCAGGGAGGGACCGTCCTTGCTGTCATTCTCTTGGACTAACGAGGAGACAAAGTCACAGAAGCCAGTTTCACCAGAGAACTCTTGTATTTGTTTACAGAGGCAATAGAGATAGACAAAGCGCATGGCCGGCATCTGAGGTGGACGGTCAAGGTTACGGACAAAGGCCTCAGTCTCCGGACTGCGGAGGAAGCGGGCAAACGTGTAGGAGGTCATCTCCTCCATGGGATCCTCGAGCTCATCCACGTCGGCCATC
s NC_006146.genome 102315 1588 + 171096 TTGATCGTTTATTTGG-CAGAAATGGCAGTTCATCATTCTCAGA---CTCATCATCGTCTAGCCCCTCGTTGGTCTCCCCGCCAGCCCTCCCTTCCTCAACTGCCATCAGCTGAGCAGTCTCCATACTGAAGGCCTCGTAGTCTTCATAGAGGTTAATCATGCCCCCATCCACGTTGGCTATGGAGTTGACTCGTCGCCGGCAAAGAGACCAGAGGGCACCCATGGCGCGGTGTCAAAAGTGTTGTCTGCGTAGGCTTTCCAGGAGCCGGCCGCGGCGTTCAGGGTCTCGCGGATGACAGAGTCAGGCAGCACCACGGGAGTCACCAGCACCGCCACGGGGATCTCCACAGAGGCGTCCAGCAGCAGGTCCGAGCCGAGCGTGCAGGTCGGGGGGTCTAGGGGTGAGCGCTTTCGGAAGAAGGCAGTTACAATGTTCACCCGGGGCTGGCAGTC--TCTGTCAGCCGCGCCTCCCCCGCTGTGCCGGACGTAGTCTCCGACAATCTTGTACTGGAGGAGCACCTGATAGAAGTAGTTGTGCCGCGGATTGATGAAGATATTGACGGGGACCCGGTCTTTAATACCAATGCGCCCAGCATTTTCGCTTGGGTCCGTCATGACGTAGAGCATAGACTCCACCCCCCTGTTGGCAGCCAGGGCAGCCGCCACCTGGTCGTGGCCGGGCCCCAGTTTGCGCTTACGGACCTCCTTGAGGTTCCAGGCTTCATCCTGCGTCAGCAGGTAGTCGCCCTCCGAGGGCAGCCGCCCATCCGGGACATACTCCACGGTGGGCCGGGCTATGGAATTGATGAAGCGGATAAATGACCTCTTGCAGGGCCTCTCATACAGCGCCGTGTAGGAGGGGTAGATGGGGTCAAACTCAGACTTGGAGAACAAGTACTTGAAGCGGCACTTTATCTCGTAGATGCAGCTCCGGTCTGTGAACACGATAAAGTCCCCCCGTGACTCCACGTTGACGCACAGGTCCAGAGACACACCAAAAATGCCGTCCGTCGGGCTTATCATGAATCCAAACTGGCGGTTGGCGGCCGCGTCCCCGCAGATGAGCTTACAGACAATGTCCTTGACCGTGTCCTCGCACCGGAGGCCAAACGCCACGGGCCCCCCAAAGTAATGATTGGTGGAGATGGGAGCGGGCTCAAACACCTTGGTGGGACCATTCTTAATGGTGGAGAGCAGCTTTGATGAGGAAATTATGCCATTTCGCAATATGTCCCACATCAGGTTCTCAGACTGCCCCCGTGTCATGGACTCCACATAAGAGCAGAGCACCGTCTTTTGCTCGTCAGTGGCCTCCTGTAGGCCCCGATAGATGGATATTAGGGAGGGACTTTCCTGGCTGTCATTCTCTTGGATTAACGAGGAGACAAAGTCACAGAAGCCAGTTTCACCAGAAAACTCCTGTATTTGCTTACAGAGACAATAGAGATAGACGTAGCGCATGGCGGGCATCTGGGGCGGGCGGTCGAGGTCTCGGACAAAGTCCTCGATCTCCGGACTGCGGAGGAAGCGGGCGAAGGTGTAGGAGGTCATTTCCTCCATGGGGTCCTCGAGTTCATCAACGTCTGCCATC
s NC_004367.genome  94369 1576 - 149696 TTTATTTTTTGTTTGGTCAGGGCCGTAAATTCATCATCGTT------GTCATTATCGGAGAGTTCATTTGTGATTTC------GATCTCATTTTCATCATCGGCGATAAGACAAGGTGTTTCCACGGAAAAGCACTCAAAGTCATCATATAGATTAATTTCTTCCCCATTTACAGACTTCAGGGGGTATACTCTGCGCCGGCAAAGAGAGAAGATGGAACCCATGGTGCACTTTCAAAGGTATTTTCGGCGTATGCCCTCCCAGATTCTGCAGAAGTAGCCAGTGTCTCCTTCACGACGGAGGGAGGGATGTATATTGGTGTTACAAGAACAGCCACGGGTATTTCAACAGATGTATCGAGTGGTACTTGCGGACCGATTGTACAGAGTGCCGGGTCCGACGAAGATCGTTTGCGGAAAAAAGCTGTCACAATATTCACTTTGGGCTTAGGGTTTGTTTTCTTTGATTGAGACCCCCA-----GCGTATGTAGTCTCCTACAATTTTGTACTGAAGCAGCACTTGATAGAAGTAGTTGTGTCGCGGATTAATGAACACATCTACAGGGACGCGGTCTTTAATACCAATTATCCCTGAATTCTCACTTGGGTCATTCATGACGTAGAGCATAGACTCGGCCCCTCTATTATAATCTAAACACGTGACTACTGTATCATGACCTTCACCTAGTTTGCGGCGTCTCACTTCCTTCAAATTCCAGGACTCATCCCTAGTTAATAGGTAGTCGCTTTCTGATGGAAGCCTCCCATCGGCTACATATTCAATGGTTGGACGGGCAATAGAATTAATGAATCTAATAAACGATTTCTTGCTTGGGTTCTGATACAAAGCAGTGTAAGATGGGTAGATGGGATCAAATTCAGATTTGGAAAACAAGTACTTGAATCTACACTTTATTTCATAAATGCAGCTGTCATCTGTAAACACTGTAAGGTCTCCTTCTGTTTTAACATTCACACACAAATCTAGAGAGACCCCAAAAATGCCATCCACGGGGCTTATCATAAACCCAAATTGCCGCTGCTCAGAATCTACTTTTTGTATCAGGTTGCAAATAATGTCTTTTACCGTATCCTCACACCGTAAACCAAATGCAATGGGGCCGCCTACATAGTGGTTGTTGGAAATTGGGTTTGGCTCAAACAGTTTCATTGGTCCATTTTTAAGAGTGGACAGCAGTTTTGAAGATGAAATAATCCCATTCCTGAGAATATCCCACATCAGGTTTTCAGACTGGCCACGTGTCATAGACTCAATATAGGAACATAGTTGGGTTTTTTCTCTTTCTGTGGTTCGGGCCAGCGCTCTGTAAACCGCCCTTAGGGACGGTGGGGTCTCACGTATATTCTCCGGGATTAACGCCGTCACAAAGTCACAGAAGGCAGTGTCACCTGAAAACTCTTGTATTTCTTTACAGAGACAATAAAGATACAGATAGCGCATTGTGGGCATCCGCGGCTGTTCCCGAATCTCCGAGGCAAATCTTACAGCATCTGAACTGCGCAGAAATCTGGCAAAGGTAAATGTCGTCATATTGATCATCGGATCCTCCATTTCGAC-ATGTTGACTACC

a score=290210.0
s NC_007605.genome 110054 2410 + 171823 TGGACC------AAAGAAGTCGTCTGCCAAGAGTTCAGCTACCAGACCTGGAAGATGAGGGTGCTCAAACCGTGGGCGACAGTTGAAGAAGTAGCTCTCCTTGAACCTCTTTTTAAGGCTCCGGCACCACTGCAAGAATTGACTCATATGCTCCGCCGTGACA--TCCACGCACGGACTCTCGCCACACGAGGTCAGGCCCATGTCTAAGTTCAGGTTCCACATCTGCGACAGCACCTCCAACAGCACCACCTTTGGGGCTGCAAATTGCAAAAAGTAGAGCGGGTCGGATCGGTCAAATCCCATGTCAGGGTTGGGGTAGGGGATTTTGTGGGTGGAGTCAGCGAGGTGCATGATACCATAGAGCAGCGAGTAGCCGAGCGACTGCAGATCCAGGCGAAGGGCCGTCTGCGCCCCCACGGGGCCACACGCCGAGGGGTCAGGGATGTGCCCAGCCCCCCTCAAGATGTAGCACTTGCTCAAAAGGCAGAGGGGCTTATAGGTGTCCTTGGCTATAGAAAATGGTTCCCTCTGGCAATAGAGGCGATAGAGCTGCCGGCCCTTAGAAGACTTTAGCCGCACATCCAGCATCTTGTTGCGGTCGTGGAGGGAAGCAGTCCCATAATCAGTCAGGACCAGCCTACCCATGCCCCACATGGTGTCTGTGAAATCCACCAGGATGTTGCTGGGGCTAATGTCCGAATGGAAGAGGCCGCAGTGCCGATTCAGAAAGTAAACGGCATCTTTGAGGCCCTGAAAGCCCCGCACCAGGGGCTCAATACTACCATCATGCCAGTGGCCATAATCCTGGAGACTGCATCTGAACTGGGGCATAAACAGGGCGTGGCAGGACGTGCAGGCCGACAGGTAGTCCACCAGGGCCTTGTCCTGCCCATCCTCGGCCGTGGCCTTCCCAATCTGAATCATGTCACACACCATGAGCTCGTGATACAGCTCCGTCACAGAGTCATAGAGTTTGACCGTGGCATTATCTGCATGTGCATACACGGCCCCGTAGCTCCCCCGCCCCAGCAGATACTCGCAGGTAATGGGGAGGTGATCACAGCGCGTCATGTTCTCCGGCAGCTTTACATAGAGGGTCTCCGTCATGTCATCAATGTTGGTCACCTTCAGGTGTTTGTGCTGAAAGGTGAAGTAATCAATGACAGTCACCTTCCCCAAAAAGGCCTGGGTCTCTCGAGGGGGTTCTGGGGAGACACTCAACTCGCCACTGCTGGAGGA------------GTTCGTCGGGCTCAACTCCGCAGCCATATTCACATC---CATGTTCCTCAAATGGCTCGAGGGCC-------TGTCGCAGCTCGTCTCTGGCCTCAAGCTCCTGCTCACGGAGCTCCTCCACCCGCTCTAGCTGCTTGTAGTTGATTTTTGGAAAT-------TGAGTCT--TGGTCGCGGTGACCACCCTCTGATAGGTAGAAATTAGCTGTTTGGACTCAAACGTCTCCCTTGCGTGGCGCAGGGACTCTAAGGCACCCCGAGCAGATGTAAACTGTGTTTCAAACAGAGCGTGGTCCCTCCCAAATCTGTCACGTGCGCTCACAGCCGCTCTCTTTTCTACCGAGGCTCTTAGTTGCTGGGCCACCAGATCTCGCTTAGAACTACTCATCTTCATAAGTCACCATGTCCGCAACTATGGAGCCCAGATCATACGTGGGGTAGAGTACGGTAGTTCCAGTGGAGGCTTCCCGGTAATTTCCCACAGCGTCCACCATATATCTTTCTGCCTCTCCCGTTAGAATTAGGCAAGGATCATACGTGTCCACCGGCCTTTTATACTGAGCGTTTAGGTTTTGTTTATGTAGCAAGCACAAAAGGCACACACGAGTGATGCAAAAGGGTTCCTGAGGCAGCAGGCAGAGCTGTTTTGCCATTTTATTCAGGCGGCTAACGTCAAAGGGAGGAGCTATATCCTCA--------CCCTTCCAGTCACGC-ACGTCCAAGTACAGGGCATACACACACCTGGTGAGGTGTGCCAGGAATGCCTCTATGTTGGCACATGGTGTATAAACCGCAGTGGGTAGCAGAATAGGGCCCCTTTTGCCCCGTGCCGCAGCGTAAACGCAGTGACGCTCTTCGCAGTGGGACCTGGGGCCGTAGAAGAGGGCCCACATCCAAGGGAGTGGGTCTTCAGGCACCAGGGAGGTCCAGGTTTGGGAGTGGGCCAATATTTGCAAGGCCTGACCTATAACC---TCATCTTTGTTCCAGGCCAGCGCAATTCGCATAAGGTCCCCATCAAACACCTCAAAACACAGACCCATGCCCATTTCAGGCTGAGAGGGCTCCATCCGGCTCGACCAACCT-----------TGTCCACCAAACTGCC------ATTCTTCTGGTAAACGGGGGTTGAGGG---GCAAGAGCTCCAAAGCCAGGCTCGAGAAGTCATA-------------GTCATCCTCGGCCACACG---------------------------GCCGGAGCTCCGGG--------CCT
s NC_006146.genome 103903 2413 + 171096 GGGACC------AAAGTACTCGTCTGCCAAGAGCTCCGCCACCAAACCTGGGAGAAGAGGGTGCTCAAAACGCGGGCGACAGTTGAAGAAGTGGCTCTCCTTGAACCTCTTTTTAAGGCCACGGCACCACTGCAAGAATTGACTCATGTGCTCCTCCGTGACA--TCCACGCACGGACTCTCGCCGCAGGAAGTCAGGCCCACATCCAGGTTCAGGTTCCACATCTGCGACAGCACCTCCAGCAGCACCACCTTCGGGGCCGCAAATTGCAAAAAGTAGAGCGGGTCCGATCGGTCAAAGCCCATGTCGGGGTTGGGATAGGGAATCTTGTGGGTGGTGTCGGCCAGCTTCATGACGCCGTAGAGCAGCGAGTAGCCGAGCGACTGCAGATCCAGTCGCAGGGCCGTCTGCGCCCCCACGGGGCCGCAAGCCGAGGGTTCAGGGAGGTGCCCCGCCCCCCTCAGGATATAGCACTTGCTCAAGAGGCAGAGGGACTTGTAGGTGTCCTTGGCTATAGAAAAGGGCTCCCTCTGGTAGTAAAGGCGATACAGCTGCCGGCCCTTGGCGGACTTTAGCCTCACGTCCAGGATCTTGTTGCGGTCGTGGAGGGAGGCCGTGCCAAAATCCGTCAGCACCAGCCTCCCCATGCCCCACATGGTGGGGGTGAAATCCACCAGGATGTTGCTGGGGCTGATGTCTGAGTGGAAAAGGCCGCAGTGCTGGTTGAGAAAGTAAACGGCGTCCTTGAGGCCTTGAAAGCCCTGCACCAGGGGCTCGATGCTGCTGTCATTCCAGTGGCTATAATCCTGGAGACTGCATCTGAACTGGGGCATAAAGAGGGCGTGACAGGATGTGCAGGCCGACAGGTAGTCCACCAGAGCCTTGTCCTGCCCATCCTCGGACGTGGCCTTTCCAATCTGAATCATGTCACAGACCATCAGCTCGTGGTATAGCTCTGTCACGGCGTCATAGAGCTTGACGGTGGCGTTCTCCCCGTACACATACACGGCCCCGTAGCTCCCCCGGCCCAACAGATACTCGCAGGTGATGGGGAGGTGGTCACAGCGCGTCAGCTCCTCCGGCAGCTTCACGTATAGCGTCTCCGTCATGTCATCAATGTTGGTCACCTTCAGGTGCTTGTGCTGAAAGGTGAAGTAATCAATGACAGTCACCTTCCCCAAAAAGGCCTGGGGCTCCCGAGGGGGCTCTGGGGAGACACTCAACTCTCCACTGCTCAAGGA------------GTTCGTCGGACTCCTCTCCGCGTCCATAGTCACATCGTCCATGGTCCTCAAAGGGCTCGAGCGCC-------TGGCGCAGCTCGTCTCTGGCCTCGAGTTCCTGCTCACGAAGCTCCTCTACCCGTTCCAGCTGCTTGTAGTTTATCTTGGGGAAA-------TGGGTCT--TGGTTGAGGTGACTACCCTCCTGTAGGTGGAAATCAGCTGCTTGGACTCAAACGTCTCCTGCGCACGTCGCAGGGTCTCTAGGGCCACACGAGCAGATGAAAACTGCGTTTCAAAGAGAGCGTGTTCACTCCCAAATCTGTCACGTGCGCTCACCGCCGCTCTCTTTTCTACCGAGGCTCTGAGTTGCTGGGCCACCAGGTCTCGCTTAGCACTACTCATCTTCATAAGTCACCATGTCCGCCACTATGGAACCCAGATCATAGGTGGGATAGAGGACAGTGGTTCCGGTAGCAGCTTCCCGGTAATTGCCCACGGCGTCCACCAGATATCTCTCAGCCTCTCCCGTTAGAATTAGGCAGGGATCATACGTGTCCACCGGTCTTTTATACTGAGCGTTTAGGTTTTGCTTATGCAGCAGACACAGGAGGCACACTCGAGTGATGCAAACGGGTTCCTGTGGTAGCAGGCTGAGCTGTTTTGCCATTTTATTCAGGCGGCTCACGTCAAAGGGAGGAGCTATTTCCTCC--------CCCTGCCAGTCACAC-ACATCCGCATAGAGGGCATACACACACCTGGTGAGGTGTGCCAGGAAGGCCTCTATGTTGGCTCGCGGCGTGTAGATCGCAGTAGGCAGCAGAATAGGGCCCCTCCTGCCCCGCGCCGCCGAGTAGACGCAGTGCCGCTCCTCGCAGTGGGCCCTGGGACCGTAGAAGAGTGCCCATAACCAGGGAAGCGGGTCTTCAGGCACCAGAGAGGTCCAGGTTTGGGAGTGGGCCAATATTTGCAAGGCCTGACCTATAACC---TCATCTTTGTTCCAGGTCAGCGCAATTCGCATCAGGTCCCCGTCGTAGGCCTCAAAACACAGACCCGAGCCCTTCTGCACCTGAGGCGGCTCTGCGGGTGTTAACCCCCCC-----------TGTTCACCGAACCGCC------ATTCTTCCGGTAAACGAGGGTTGAGGG---GTGAGAGCTCCAAGGCCAGGCTCGAGAAGTCATA-------------GTCATCCCCGGCCTGCTG---------------------------ACACGGGTCCCGGG--------CCT
s NC_004367.genome  96133 2494 - 149696 TGGACCTGCTGAAAAGTAGTCTGTAGCAAGTAATTCTCCAACTAGTTCAGGAAGCTCAGGGTGTTCAAGGCGCATACGACAGTTAAAGAACTGGCTTTCCGCAAAGCGCTTCTTAAAAGATTTACACCACCGAACAAACTGACTCAGATGGTCCT--GTGACAGGGCCACGCACTTAACCTCGCCACAGGACGTGATGCCTAGGTTAACATCCATGTTCCACAGTTGACTCAATACCTCCAGTAAAACAATCTTAATGGCTGCAAATTGCAAATAGTATGCTGCATCTGATCTGGGGAGGCCGACGTTTGGGTAGGGATAGGGGATTTTGTTCGTGGTGTCAGCGAGTTTAACAAGACAATATAGTAGAGAGTAGCCCAGGCATTGCAGGTCCATATTTAGAGCAGTCTTGTCATTCATTGGCCCACAGGTAACCGGATCCAGTTCTTTTCCCATCATCCGTAGAACATAGCACCGGCTTAGTAACATAAAGGGCTTATAAGTGTCTTTTGCCACTGTAAATGGCTCACGCTGGTAATACATCTTGTAGAGTTGACGGCCCTTACTGGATTTTAAACGTACGTCCAGCATCTTGTTTCCACTGTGCAGGGTCGCATTGCCGAAATCTGTCAGGACAAGCTTTCCCATGTGCCAGAGGTGAGGTGTGAAATCCACCAAGATATTGCTTGGGCTTACATCTGAGTGAAAAAGTCCACAATTTTTATTTAGGAAGTGTAGTGCGTCCTTTAGCCCCTTAAAGCCTTGAACCAATGGATCAATGACTAGATCTGTCCAATAGTCAAAATCTTGTAGACTGCAGCGGTACGGAGTCAGAAAGAGTGCATGACAATGTGTGCATGCAGAGAGGTAGTCGATTAATGCGGCCGTCTTTCCATTTTCAGATTTTTCCTTTCCAATTTGAATCATGTCACACACCATCAATTCATGGTACAACTCTGATATGCTGTCATACACCTTTACAGTCGCATCTGTGCCGTGTGTATACACGGCGCCGTAACTTCCCGCTCCTAGTAGATGGTTAAAGGAGATGGGTTCGTGATCACAGGTGGTCATTTGATCTGGAAGTTTTACAAACAGAGTTTCGGTCCTCTTATCTATGTTTGTTACTTTTAGATGCCTATGCTGGAAGGTAAAGTAATCAATAACGGTAAGATTTTCCAAAACGTCTAGAGTGTTATTTTGGGACCGATGGGAGTTGTTCCAGGCGCCAGCGCTCAACGATATCTGCTGGCTGTTCATCAAATTCGTATCCATTGCCGTGTTCTCCTC---CATCCCGTTTGAAAGGTGCAAGGGCTTCCTTAATCTCAGAGCACGTCTC---CTCCAA----CCGGTCCTGGAAATCTTCAGCGAGTTCGAGTTCCCTATGGTTTATTATGGGCAATGTTCCACGGAGTCTTCTGGATCTTGAGAGGATACACTTATAATCAGATACAAGGCTTTTCAATTCAAGGTCGGACCGTGTGCGGTTCAATTCCCTAACTGATTCCTGAGCTGCAAGCAGTTGGTTGTGAAACAAAACGTGATCTTCTCCAAATCTGTCGCACGTGGAGACGGCGACTTTTTTTTCAATGCTTGCTCGTAGCTGCTGCGCTATCAGATCTCTCTTAGTTTTAGCAGTGTCCATGTGCCAATAAGTCTGTGGCCATAGACTTAAGATCGTAAGTAGGAAATAAGACCGTAGATCCCGTCTTATACTCTCTATAATTTCCTACATCACCAACTAGGTATTTTGCCGCCTCTCCAACAAGCATAATACAAGGACTGGGGGCAGTCAGACTTGCTTTATACTGCGCAGTTAGATTCTGCTTATAAATTAAGCACAGTAGACAAACTCTTGATAAATGAAGTGAGTCACACCTTAAAAGCCCCATTTGGTGAATCACTCTGTGTAGGCGTGCTGGGTCAAAAGGTATGCTGACACTTTCCGGGATCAGACCTCCCACTTCTGTGATGTCAGAATAGAGGCCTGTCACAGAGCGAGTAACAAATCCCATGAATGACTCTATGTCCGCCTCTGGGCGAAGGGCCATTTCAGGGAGTGCCATAGGTCCGGGCCTGCCCACGGTTTCCTTATACATACAATGGGGACTATCGCATAAGGACCGGGACCCATAAAACAATAGCCAGATCCACGGCAGTGGGTCTTCCGGAATGAGGGATGTCCATGTCCTGGGATGGGCCAGTAATTGCATTGCT---CCTGTAATTATGTCATCCTTGTTCCAGGACAAGGCTGCCCGTAAGATGGGGCCATCATAGACCGCAAATGGTAGACCAGTG-------------------GATC-GCGTGTGTTGCTCACACTCTAAGGAGGTGTGTTCATATGTGTGTTCTGAAGATTCTTCAAGGGTATATGGTTTGTGTGTACGCGCGCATCGTAAACTGAGGCTTGAAAAGTCATATTGTTTACAATAGGTTGCACCCTTCTCGCCGCTAATTCTCCTTTCATCTGCGTTATCTGCAAGGATATCGGGTGAGTTATCCT

a score=154867.0
s NC_007605.genome 112464 1146 + 171823 CGTGCCAGGGCCTGTTGTCCTGGGGGAGGATATTGGACACGAGCAGGAAGCTCTTGAGTGGCGTCTCCACCAGCTTAAATTGCTCGGGCGTGTCCTGGCAGGCCTCCAGTGCCAGTTCCAGACACTGCCCATACCTGCGGGCGAGCATCGGGTCATCGGGCATATCGGCCTTGACCGCGTTGAACATGCTGTATGCCTCGCAGCGCGGCCGTCTGACCGAGAACCTAAGAAACGCCCTTCAGCAGGACAGCACCACGCAAGGCTGCCTGGGTGCCGAGACCCC------GAGTATTATGTACACAGGGGCCAAGTCAGACAGGTGGGCTCACCCTCTGGTGGGCACAATTCACGCCAGTAATTTATATTGCCCAATGCTTCGAGCATACTGCCGCCACTAT----GGCCCCAGGCCCGTG-TTTGTAGCTTCTGATGAATCA----TTACCCATGTT-CGGTGCGAGCCCTGCCCTTCACACCCCAGTCCAGGTCCAGATGTGCCTACTACCAGAGCTACGCGACACGTTACAGCGCCTGCT----GCCACCACCCAATCTTGAAGACTCCGAGGCCTTGACGGAATTCAAGACCAGCGTGTCCTCTGCCCGTGCCATCCTTGAGGACCCCAACTTTTTGGAGATGAGAGAGTTTGTCACCAGCCTGGCCAGCTTCCTGAGTGGTCAGTACAAGCACAAGCCCGCCCGCCTAGAAGCATTCCAGAAACAAGTAGTGTTACATTCTTTTTATTTTCTGATCTCAATCAAATCTTTAGAGATTACAGACACCATGTTTGACATCTTTCAAAGTGCTTTCGGATTGGAAGAAATGACGCTGGAGAAGCTGCACATTTTTAAGCAAAAAGCCAGCGTGTTTCTTATCCCCAGGCGCCACGGCAAGACCTGGATAGTCGTGGCCATCATCAGCCTCATCCTCTCGAATCTCTCCAACGTGCAAATAGGCTACGTGGCTCACCAGAAACATGTCGCGTCCGCCGTTTTCACTGAAATTATTGACACCTTGACCAAGAGCTTCGACTCCAAGCGTGTAGAGGTCAACAAGGAGACCAGCACCATCACGTTTAGGCACAGTGGGAAAATCTCCAGCACCGTAATGTGTGCCACCTGCTTCAATAAGAATGTAAGACCTGACGTTTCAGTACTTG
s NC_006146.genome 106316 1146 + 171096 CCTGCCAGGGCCTGGTGTCCTGGGGGAGTATATTGGTCACCAACAGAAAGCTCTTGAGCGGCGTCTCCACCAGTTTGAATTGCTCGGGTGTGTCCTGACAGGCCTCAAGGGCCAGTTCCAGACACTGCCCATACCTGCGGGCGAGCATTGGGTCATCTGGCATATCGGCCTTGACCGCGTTAAACATGCTGTACGCCTCGCAGCGTGGCCGGTTGGCCGAGAACCTCAGAAATGCCCTTCAGCAGGACAGCGCCACCCAAGGCTGTCTCGGCGCCGAGACCCC------AAGTATCATGTGCACGGGGGCCAAGTCAGACAGGTGGGCGCATCCCCTGGTGGGCACCATCCACTCCAGTAATTTATATTGCCCAATGCTGAGAGCTTACTGCCGCCAGTAC----GGCCCCAGGCCCGTG-TTTGTAGGCTCTGATGCAACA----TTACCCATGTT-CGGAGCGAGCCACGCCCCTCCCGCCCCGGCCCAGGCGCAGATGTGCCTCCTGCCGGAGCTCCGCGACACCTTGCAACTCCTGCT----GCCCCCACCCAGCCTGGCAGACTCCGAGGCCCTGACTGAATTCAAGACCAGCGTGTCCTCCACCCGTGCCATCCTCGAGGACCCCAGGTTTGTGGAGATGAGGGAGTTTGTCACCAGCCTGGCTGGCTTTCTGGGGGGACAGTACAAGCACAAGCCGGCCCGCCTAGAAGCATTCCAGAAACAAGTAGTGTTGCATTCATTTTATTTTCTGATCTCAATTAAATCATTAGAGATTACAGACACCATGTTTGACATCTTCCAAAGTGCTTTTGGGTTGGAGGAGATGACGCTGGAGAAGCTGCACATTTTCAAGCAGAAAGCCAGCGTGTTTCTCATTCCCCGGCGCCACGGCAAGACCTGGATAGTCGTGGCCATCATCAGCCTCATCATCTCAAACCTCTCCAACGTGCAGATAGGCTACGTCGCCCACCAGAAACACGTCGCCTCCGCCGTCTTCACTGAAATCATCGACACCCTGGCAAAGAACTTTGATGCCAAGCGCGTGGAAGTCAACAAGGAGACCAGCACCATCACCTTCAGGCACAGCGGGAAAATCTCCAGCACCGTCATGTGTGCCACCTGCTTCAATAAGAATGTAAGACCTGACGTTTCAGTACTTG
s NC_004367.genome  98651 1134 - 149696 CGTGCCAGTCTCGTTTGTCTTGGGGCATAATATTGGACACCAGTAGGAAGCTTTTTAGGGGAGTTTTGACCAATTTAAACTGCCCTGGCGTGTCCTGGCAAGCATCTATTGCTAGTTTAACACATTGTTTATATTTTTTGGCCAGCTCTGGATCAGACGGCGTATCAGCCTCCACTGCGTTAAACATGTTCTATTCACAGCAACGGCTCCGCTTACAGGAACACCTACGCCGAGTGTTAAAGAATGATGGTGAAGGTCGAGGATGCCTCGGATCCGAACATCCATCAATAATTATAGACTGCAAA------AAGTCGGACAGGTGGGCTCATCCCCTAATAGGAGTGATTCATTCTACCAATTTGTATTGCCAAACGTT----------TGCCCTCATTTTGTCGGACTTTTGGGCCGCGAATCGTAAGCCTTCCTGAACAAGAGTGCGCCCGGGCTACATAAGGGGCCGAGGCC----CACCCCG--------TCAAATGCACATGGTCGCAGACCTGTCGGTAACACTCGAGCGGTTGCTCGAAAATCCAGGCCAGCCT----GACCAAGAGACACTGACTGAGTTTGAAACCGGAGTACGATCAACCAAGTCTATCCCGGAAGATCCTACTTTTAAGGAAATGCGCCAGTTTGTTAGTGAATTGTGTTTGTTTCTAGATGGGCAGTATAGGTGCAAAAAGGCAAGATTAGAGCCATTCCAGAAACAAGTAGTGTTGCACTCCTTTTATTTCCTAGTCTCAATTAAGTCAGTGGAATTGGCTGATACCATGTTTAACCTGTTTCAGGATTTATTTGGACTGGGTGGAATGAGCCTGGCCAACCTAAAGACATTTAAACAAAAGGCCAGTGTGTTTTTAATCCCAAGAAGACACGGCAAGACATGGATCATTGTTGCAATAATAAGTTTAATTCTAGCCTCTATGTCTAATGTACAGATAGGTTACGTGGCTCACCAAAAGCATGTGGCTATGGCAGTCTTCGCAGAAATAATCGAAACCCTAAATAGGGGCTTTGATACTAGGTGTGTGGAAATCAACAAGGAAACCAGCACGATCACATTTCACCATCCAGGAAAGCAGTCCAGCAGCGTCATGTGCGCTACGTGCTTCAATAAGAATGTAAGTATCAAGGCGTCAATACATG

a score=165729.0
s NC_007605.genome 113610 1393 + 171823 GCAATTGTAGAGCATAGCCCGGCTGTAAAGGTCAGAAAATCGCAGCAGGGTCCAAGGTTGTGCTGTACATGGGACCTCTTTCCCATTAGCAAGAACCCCCTGCAGGACACGTGACATGTCCGGGTGCATTTTGGGTGGGTTAAATCTCAGTCCCACCACAAAGGGGGCATCCTCCGGTTTGAACATCAGACCCAACAAAGCCCGATGCCCAGTTATGGGTACGTAGTCGTTGTTCAGGGCCGTGCATGGCAGCAGACAAGGACAGGTGCCAGATGTGCCTGGGCTATCGTCCTCCGTCCAGCCACGCAGGATGTTCACGTGGGCCCCGGCACCATAGCATGTCACACATTCCCCGTTATCACATCTGGTTAGCAGGTTGATAAAATGGGTCAGTGATGGAAAGGTTGGCATATTGGGGCAGCACATCAGCATGTCCATGTTAACGAAAAACATGTACAGGGCCCCTTCTGCATACCAGGCACCACCCCGTCCCAGTGGGATGATCTCCGAGGGTGTGATATCTTGCAGTTCTTCTACTGTTTTAACGGCGGTTGAGGTGGTAAAGACGTGGGCCGTGGTCAGATCTGTGCAGGTGACTACAGGGTTACCCCTAATCTCCACAGGCACCGCCTCACCCACTGCATCTGAGAATACCCCAAAGTACATGAGAGTCAGGCTGTGTGGCCCCTGGACTGCCTTAGTGAAGAGAACCTCGGGCCTGGCCACGGTGGCTAGGGTTCCATTGATGTAGACGGTCACATAGGTGGGCTTCTTCTTGGGCTTCAGCACAATGAGGGTAACATTCATGTAGGTTTTAGGAGGTCCGGCTATCTGAGGCACGTACACAGCTGACACGGCGGTTGTGGCCGTATAGACTTTCATCTGGGGCGTAGAGGCATCGCTCAGCACCCAGAGGCACTCCTTGTTGAGGAACTTGCGAAGCTGTTCCCGGCTACTGTTCGCGGCGGATGCCATG---ACGTGCCAGAATATATCCCCTCTCCTCGGGGGTGAGTGCCAATTGG------CCTTTAATAACAAAGCCCCCAGGCAGCACCAAAAATGCCTGCCCGTCCGATGTGGTG--GCCAGGTGGACGCAGTGCCCGTCAGTTCCAAGGGCTACTAGCTGGGAAGCAGCCCCAACCAGCCCACCCGGGGGCCTGGAGTCGATCACCTTACCCCAGGCCGAGGCCCCTTCCTCATACAGCGGGTGGCTATCTATCCATAGGC-----AGGCATCCGGCGTC----TTTGGTGCATTGGAGATAGTAGCTTTCACCCAACAACTTTCCCAACTAACCCGTGTCTGGACAGTGAAGAACGCTTCCCTGATCAGGTCTGAATTTTTATAGATACGGGAGTAGGAGGTGGGAATAACAACTGGGATTTCTTGTTGTGCTGTCCA
s NC_006146.genome 107462 1390 + 171096 GCAGTTGTAGAGCATTACCCGGCTGTAAAAGTCAGAAAAGCGTAGCAGGGTCCAGGGCTGCGGCGTGCACGGGACCTCTTTCCCATTAGCCAGAACTCCCTGCAGAACACGAGACATATCCGGGTGCATTTTTGGTGGGCTGAATCTCAGTCCCACTACAAAGGGGGCGTCCTCTGGTTTAAACATGAGCCCCAGGAGGGCCCTGTGCCCAGTTACCGGCACATAATCATTGTTTAGGGCAGAGCAGGGCAGCAGACAGGGACAGATACCGGAGGTGCCAGGGCTGTCATCTGCCGTCCAGCCACTCAGGACGTTCACATGCCCCCCGGATCCATAACAAGTCACACAGTCCCCATTCTCACATCGCGTGAGCAGGTTGATAAAATGGGTCAGAGATGGGAATGTTGGCATATTGGGGCAGCACATTAACATGTCCATGTTGATGAAAAACATGTACAGGGCCCCTTCTGCGTACCAAGCCCCGCCTCGCCCAAGTGGAGTAATCTCCGAGGGTGTGAGATCTTGCAGTTCTTCTACTGTTTTAACGGCGGTTGAAGTGGCGAAAACATGGGAGGTCGTCAGCTCCTGGGAGCTCAGTATTGGGTTGCCCCTAACCTCCACAGGCACAGCCTCACCCTCCGCATCTGAAAACACCCCAAAGTACATAAGAGTCAGGTTGTGTGGCCCCTGGACGGACTTGGTGAAGAGAACCTCCGGCCTGGCCACGGCGGCCAGGGTTCCATTGATGTACACCGTCACATATGTGGGCTTCTTCTTCGGCTTGAGCACGATGAGGGTGACGTTCATGTGGGTCCGCGGGGCTCCGGCTATCCTGGGCATGTACACGGCCGACACGGCTGTAGTGGCCGTGTAAACCTTCATCTGGTTCGTGGAGGCGTCGCTCGGCACCCATAGGCATTCCTTGTTAAGGAACTTGCGCAGCAGCTCCCGCTCATTGCCTGCGGCGGACGCCATT---TCGGGCCAGAACGTATCCCCTCTCCTCGGGGGCGAGTTCCAATTGG------CCTTTAATAACAAAGCCCCCGGGCAGCACCAAAAACACCTGTCCGTCTGACGTGGCG--GCCAGGTGGACGCAGTGCCCGTCCGTACCAAGGTCCACTAGCCCGGAGGCCGCTTCAGCCAGCCCACCCGGGGTTCCGGAGTCGATAACCTTACCCCAGGCCGAGGCCCCGTCCTCGTACAGCGGGTGGCTATCTACCCAGAGGC-----GAGCTGACGGCACC----CCCGGGGAGCCGGAGATAG---CTTTCACCCAACAACTTTCCCAGCTGACCCGTGTCTCAATAGTGAAGAACGCTTCCCTGAGCAGGGTTGATTTTTTATAGATACTGGGGTAGGAGGTGGGAATAACAACTGGGATTTCTTGTTTGGCTGTCCA
s NC_004367.genome 100037 1402 - 149696 GCAGTTATACAGCATAACCCGGCTGTAAAATGTTGAAAAGCGTAATAGTGTCCATGTTTTAGGTGTACAATCCACCTCTTCACCGGTGGCTAATACGCCGCTCAACACGTTGGAAATGTCTGGATGTAGCGACCCGTGCTTAAAACGTAGACCCACAATATTTTTTACATATTCAGGTTTAAAAATTAGTCCCAGGAGATTCTTGTTTCCTGTTACAGGCACATACTCGCTATGCATCGCCGAGCAGGGTAGTAGACAGGGACAGGTTCCGGATGTTCCCGGACTTTCCTCTCCTGTCCACCCGCTAAACACATTAACATGAACTCTTGCCCCATAACAAGAAATGCATCCAGTGTCATCACATCTAGTTAGTAAGTTAACAAAGTGAGTTAGTGAGGGAAATGTTGGAATATTGGGGCAACACATCATCATATCCATATTGATAAAGAATGTGTACAAAATTCCCGAGACCATCCATGCTCCCCCACGGCCAAGTGGAATAATATCAGACTTTTTAATGCCTTTAAGATCTTCTATCGATGTAACGGGTGTTGAGGAAGAATAGATGTCTGACGTTCTCAAGTGGAGGTTGGTTATCACAGGTGAACCAATTGATTCTACTGGAACCTGTTCATCTACCACATCTACAAACATTCCAAGATAGATCAGGTACACTTTATGTGGGCCCGGAACTTCACGTGTGAACAGTGCCTCCGGCCGTGCACAGGCCATAAGAACCCCGTTGATGTAAACAGTAACATACAGGCCCCTGTCCCTGGGCTTCAGAATCAACATGGTGACATTCATGAACGTCCTCCTCCTACCTCCTAAATGCGGGGAGAACGCGGCGGAAACCGATGTAGTGGAGGTGTAGATTTTTAGTCGCTGATTTGAAGCAGAGTTTAGCACCCATAGACATTCCTTGTTAAGAAATTGCCTCAGTTTCTCTATTTCTGATCCTACGCCGGTGGCCATGGCTGCGAGCTAAAACAAAGAGTTCCTC------GGCCAGTTCCAGGTGTAACACCCCTTTAATAACAAAGCCCCCTGGCAAAATCAGGACTA--TAGTCTTCTTACGTGACACCGCTACATGGATGTACGAGCCGTCACTTGCGAAGTGAATAAGATCTGCACTGGTTCCA---AGAATATTAGGTGTCCTTGTTGAAATGATGCGTCCCCAGATGGATGGTTTGGCTTCATACAGCGGGTGACTGTCTATCCAGGTGCATTCAGAGCTTTCTGGGCTAGAGTCAGGTTCTCCGGCTAAGGTGGCTTTCACCCAGGCACTTTCCCAGCTAACCCTTGTCTGTATTGTAAAGAACGCTTCTTCTAGAAGGTTAGAATCTTTATAGACCCGCGAATAATTGATGGGCAGGGTAACAGGTATTTCCTGTCCTATTAGCCA

a score=20985.0
s NC_007605.genome 115003 364 + 171823 GGCCTGCATGGCCAGTTTTTCCCTGAAGCTAGCAGAAATTCTGAGGGCCACTGAAATGAGGAAGCGAAACTCCCTCTCTGGAGCTCCCAAAATTGAAACCTCAGCAAGATCTGTTGCTGGGGAGGCATGGGTGACAGCTGTCATCCTGTGCAGTCTGCCCTGGGCACTCAGCTCTGGATATGTGACAACATAGAGAGCGTGGGGGCTAAAAATATGAGCAATTCCCCTGACCAGGGCCCTGGACTCACGAATGGCCCGACGGGTCTTAGAGAAAGAAACAGGCACCCTCGAGAGTGCCCCCGACCCGACCCCCACAGTGCCGCCAGTCCCTGCTCGGCCTCCGCCGCCTTCCCCACCGGCGCTG
s NC_006146.genome 108852 356 + 171096 GTCCTGTGCAGCCAGTTTTTCCCTGAGGCTGGCAGAAATTCTGAGGGCCATAGAAATGAGGAAGCGAAACTCCCTCTCAGGAGCTCCCAAAATTGAAACCTTAGCAAGATTTGTGGTCAGCGAGGTGTGGGTGACAGCTGTCATCCTGTGCAGTCTGGCCTGGGCACTCAGATCTGGATATGTGACAACATAGAGAGAATGGGGGCTGAAAATGTGCACCGTCCCGTGGACCAGGGCCCTGGAGCCCCTGATGGCCCGCCGGGTCTTTGAGAAGGTTAGGGGTACCCGAGGGCGCGCCCCCGTGGAGACCTCTGCC---CCGGGAGTCCCGGCACCAGCCCCACTGCC---CCCACCAGCGC--

a score=6894.0
s NC_007605.genome 115367 41 + 171823 CCCCGGATGTTGCTGGGGTTCTCGAGGGCTGGGTGGTGCTT
s NC_006146.genome 109208 40 + 171096 -CCCTAATGTTGCTAGGGTTTTCTAGAGCAGGGTGATGTTT
s NC_004367.genome 101782 41 - 149696 CCCCTTATGTTACTTGGTTCCTCGAGGGCCGGGTGGTGCCT

a score=12045.0
s NC_007605.genome 115408 288 + 171823 GGACACAGAGGTCTCAGCAGCCGCCTTGGTCTCGGCCCCGGCCCTAAGTCTGAGCCCCAGGCAAAGGGCCGGACTCCCAGCGTGGCCCAACCTCTGCTCCCCTCTATTCTCCTCTTGCGTTATCTCCAATAGAATTTGCTTGAGGTCATACGTTTTAGGGTGCTCGACCTGGGCCGCGGCCACCGGCATATGCTCTATACCCGCCCCTCCGGGGGGCCCAGGATCTATAGGTATGGGCTGCATAGCCGCAGCAGACTCCTGGACCCCAGAGGCCTCTCTGATAAGATG
s NC_006146.genome 109248 273 + 171096 GGGCACAGAGGCCTCGGCCGCTGCCTTGGTTTCGGTCCCGGCCCTTAGTCTGAGGCCCAGACAGAGGGCTGGACTGGCGGCGGTCCCCAACCCGTGCCCCCCTCTCTCCACCTCCTGCGTTATTTCCAATAGAATGTGCTTCAGGTCGTAGCTGGGAGGGATCTCGGCCCCGGCCGCGGCCGCTGCAGCCGGCTCT--------TCCTCAGCGTGGCCC------TCGGGGTGGGGAATAGACAGCGAGGGC-GTCCCCCGGACACCGGAGGCCTCCCTGATCGGACG

a score=99664.0
s NC_007605.genome 115696 910 + 171823 CCCGTCGGTCAGAGCCCTTTTGGCCCCCTCAAAGAGAGACAGGTAATAAATCT-----GTAGCTCCCCAACCAGCCCTCCTTCATCGTAAAATCGAAGGGCGGCCACGTGGAAGGGGTTGTAGAGCTCTGGAAGGCC---CTCATCGCAGTAC---ACTGGCACACTGGTAAACGTGCCCCGATGGCTAGGCCGTCCGGGCAGCATGCCCCGAGCAGCAAACACGCGGCAGACCCTCGTGAGACCCGTCCGGTCACTGAAGAGAGTCTGGCACCAGGCCCCCTCGCAGTTTGGCACGCGATTGGGGCAAAGCTCTGC-CATAACCGTGTCGGGAACAAATAGGTGCACGAGGAGGGGGGTCCCGAGGCCACTCAACACTTGGTTGTCAATGTGGACATCCATAGCTCTCTCATGCGTTTGGCTACAGCATCATAGCGCTTGTTTCTGGTGGATTTAAATAACAGGGCCCCGTAGACAGTCTTTTGTGAGTAAATAGAGATGATGACATGGATGTAGAGACTGAGGACCACATCCACCACCTTCTCGGAGGAGGCCCCCCTAAACAGCATCAGGCAGCAAGGGAACACAAAGGAAACCAGGGCCGGGATGTGAGGCCTCAGCGCCCCCTCCTGATCAAAGAGGGCCTCGCTGACCCCGGAGATGACATTCTCATTCAGAAAGTAGTGATAGAGGTGATTGACCACAGTCTTAACCAGGCCCTGGACTTGTTCAGGCTCCCACTTGTCCCGCTGGTC--CTGTGTGTCTTGTCGGATCTCGGTCCAGGGCCTCAGCGCCGGCTGGAAATGCGGCCCCATGTAGTTGCCTGTAAGGGCGCACACCACTCCCTCATGGGTCTCAATCAGGGTGCACTCGCTGGATCCATCACATACGTGGTACTCGCCACAGCCCCAGCAGGCAAACA
s NC_006146.genome 109521 910 + 171096 GCCGTCGGTCAGGGCCCGTTTGGCCCCCTCAAAAAGAGACAGGTAGTAGAGCT-----GGAGCTCCCCCACGAGTCCACCACTGTCGTGAAACCTGAGGGCGGCCACGTGGAAGGGATTGTAGAGCTCCGGTCCTCC---CTCCTCGCAGTAC---ACGGGCACGCTGGTGAAGGTGCCTCGCCGGCTAGGCCACCCGGGCAGGACGCCGCGCGCCGCAAACACGCGACAGGCCCCCGTGAGACCAGCCCGATCGCTGAAGAGGGTCTGACAGCAGACCACCTCGCAGTCCGGTACCCGATCGGGGCAGAGCTCCGC-CATGACCGTGTCTGGCACAAAAATGTGGACGAGGAGGGGGGTTCCCAGGCCGCTCAGCACCTGGTTGTCAACGTGGACATCCATAGCTCTCTCATGCGCTTGGCTACAGAGTCGTAGCGCTTGTTTCTTGTCGATTTAAATAACAGGGCCCCGTAGACGGTCTTTTGTGAGTAAATGGAGATGATGACATGGATGTAGAGGCTGAGGACCACATCCACCGCCTTATCGGAGTAGGCCCCTCGAAACAGTGACAGGCAACAGGGAAACACGAAGGAGACTAAGGCCGGGATGTGGGGCCTCAGGGCTCCGTCCTGATCAAAGATGGCCTCGCTGACCCCCGGGATAACATTCTCGTTCAAAAAGTAGTGATAGAGGTGGTTGACAACGGTCCGGACCAGGCCCTGGACCTGGTCCGGCTCCCACTTTTCCCTTTGCTC--CTGCGTGTCTTGGCGGATCTCTGTCCAGGGCCTCAGCGCCGGTTGGAGATGCGGCCCCATGCAGTTGCCCGTGAGGGCACACACCACCCCCTCGTGGGTCTCGATGAGGGTGCACTCGGGGGAGCCATCGCAGACGTGATACTCTCCGCAGCCCCAGCAGGCAAACA
s NC_004367.genome 102102 895 - 149696 CTCGTATGCCACAGCCCGCTTCGCGCCCTGAAAAAGAAGGAGATAATAGATGTATATGGAAGCCCCGTTGTTTG--------CATCGGGGAACTTTATTACGACTACGTCAAAGGGGTTGTAGAGTATGCGTTGTCCCATCTCCTCGGTATACTTTACAGGAACACTGGTGAAAATACCGGTTCTTCCCCCCCGTCCACATAGCCTGCCCTTTTTAGAAAACATCCGAACAAAAGGAGTGGGTTCAGATAAACTATGAAAACGCGTCTGAACCCAGACATAGTCACATGCCGGCA----ATTCACCTATAGTTTCGTGAATAAGATCATCCGGTAAAAAGATGTGAAT---CATTGTTGCATCCGCCCCGATCAGGGTTTGGTTGTTAACGTGGACATCCATGCTTCACGCATGCGTTTTGCAACCAAGTCTGTCTTCTTGTTTCTCATTGATTTAAATAACATGCACCCGTATATTGTCCGGCGAGAGTAAATTGCTATAATTACATGGATGTATAGGCTAACAATTAGTCTCA---------CAGAGTCTGTAGATTTCATGAGAGGTAGGCAATAAGGGAAAACAAAAGAGATTAGAGCTGGGATATGTGGACGCAAGACACCGTCGTCATCAAACAGAGCAGCTTGGACACCGGGAATAACATTATCTTTTCTAAAGTAGGCATATAGGTGATTTGTGATGTTTAGCAGTAATGTTTGTATCTCCTCAGGATCCCACGTGGATTGATTTTCAGCTTCACATCTTGCACAA-----GTCCATGGCCTTACAACCGGCTTCAGATCTGGGCCCACATCCCTACCTGTCATGGCACAGACTACTCCATCATGGGTTTCAATAAGGTGACACTCAGAGGAGCCATCACATACATGATAGGTTTGGCATCCCTCACAAACAAACA

a score=6654.0
s NC_007605.genome 116606 121 + 171823 CGGAGGCCATGCTCTCAGGTAACGGGAGATGGAACTCCAGCTTACTATACGAGCACAGGTGGCGAGGATTGGGCTCAT--------------CCGT-----------GCCCCCCT-----------CCCCCCGCGG---GAGGCTCAATCGGCCTTGGTC
s NC_006146.genome 110431 160 + 171096 CGGAGGCCATGCTCTCAGGTAACGGGAAATGAGACTCCAGCTTACTGTACGAGCATAGGTGGCGAGAATTGGGCCCAGTGGGAGCACCCTCGCCGTCGGGGGAGCTGGCCCCCCGGCCTCTCACCGCTCCCCGCGGCCTGCCGCTCACTCGGCCATGGTC

a score=207293.0
s NC_007605.genome 116727 1331 + 171823 TGACATTCCACCCCGGCCAGGTCCAGGAGGGTGCAAATATTCTCCAGGCGCTGCACCTCAGAGACCTCCTGCTCAAAGAGACCTCCCACCGCCACGTAGACGCGGGCCACCGTCCGGGGAAGGTCAGTGGGGTCCCAGCTCAGCAATTCTCCAAATTCTCTCTCCCCAATAGTGCCTCGCTTCTTATCCT---GTCTTTCAGAGCATCCGGGGGCAGACATTTCACCTCTTGTTTGTGGACGAGGCTAACTTTATCAAGAAGGAGGCCCTGCCGGCGATCCTGGGCTTTATGCTTCAGAAGGATGCCAAGATTATCTTCATCTCGTCTGTGAACTCGGCTGACCAGGCCACCAGCTTTCTTTATAAGCTGAAGGATGCTCAGGAGCGGCTGCTGAACGTGGTAAGTTATGTGTGTCAGGAGCATCGGCAAGATTTTGACATGCAGGACAGCATGGTCTCATGCCCCTGCTTTCGCCTGCACATCCCGTCCTACATCACCATGGACAGCAACATCCGAGCAACCACCAACCTCTTTCTGGACGGGGCCTTTAGCACCGAGCTGATGGGTGACACCTCCTCGCTGAGCCAGGGTAGCCTGAGCCGCACTGTGCGTGACGATGCCATCAACCAGCTGGAGCTCTGCCGGGTTGACACCCTCAACCCCCGAGTAGCCGGACGCCTAGCCTCCTCCCTCTACGTGTACGTTGATCCGGCCTATACCAACAACACATCCGCATCAGGCACCGGAATCGCCGCCGTGACTCACGACAGGGCGGACCCTAACAGGGTCATCGTCCTGGGCCTGGAACACTTCTTCCTCAAGGACCTAACAGGGGACGCTGCCCTCCAGATCGCCACCTGCGTCGTGGCCCTCGTCTCCTCGATCGTCACCCTGCACCCCCACTTGGAGGAGGTGAAGGTAGCCGTGGAGGGCAACAGCAGTCAGGACTCTGCGGTGGCCATTGCCTCAATCATTGGGGAATCCTGCCCCCTCCCCTGCGCCTTCGTGCACACCAAGGACAAGACGTCCAGCCTGCAGTGGCCCATGTACCTCCTGACTAATGAGAAGTCCAAGGCCTTTGAGAGGCTCATCTACGCAGTGAACACGGCCAGCCTTTCTGCCAGTCAGGTCACCGTCTCCAACACCATCCAGCTCTCCTTCGATCCGGTCCTCTATCTCATCTCCCAGATCAGGGCCATCAAGCCCATCCCTCTCCGCGACGGTACCTACACCTACACCGGCAAGCAGCGCAACCTCTCTGACGACGTGCTGGTTGCGCTAGTCATGGCTCATTTTCTCGCAACAACACAGAAGCACACGTTCAAGAAAGTTC
s NC_006146.genome 110591 1334 + 171096 TGACATTCCACCCCGGCCAGGTCCAGGAGGGTGCAGATGTTCTCCAGGCGCTGCACCTCGGAGACCTCCTGTTCAAAGAGGCTGCCCACCGCAGAGTAGACACTCGCCACGGTCCGGGTCAGGTCGGTGGGGTCCCAGCTCAGCAGCTCCGCAAACTCCCGCTCCCCGATAGTAACTCGCTTCTTCTCCTTCTGTGTTTCAGAGCATCCGGGGCCAGACATTCCACCTGCTGTTTGTGGACGAGGCCAACTTTATCAAGAAGGAGGCCCTGCCGGCTATCCTGGGCTTTATGCTTCAGAAGGACGCCAAGATTATCTTCATCTCGTCCGTCAATTCGGCCGATCAGGCCACCAGCTTCCTTTATAAGCTGAAGGACGCGCAGGAGCGGCTGCTGAACGTGGTAAGTTATGTGTGTCAGGAGCATCGGCAAGATTTTGACATGCAGGACAGCATGGTCTCGTGCCCCTGCTTTCGCCTCCACATCCCGTCTTACATCACCATGGATAGCAACATCCGAGCGACCACCAACCTCTTTCTGGACGGGGCCTTTAGCACGGAGCTGATGGGCGACACCTCCTCCCTGAGTCACGGGAGCCTGAGCCGCACCGTGCGAGACGACGCCCTCAATCAGCTGGAGCTCTGCCGGGTCGACACCCTCAACCCCCAGGTGGCCGGGCGGCTGGCCTCCTCCCTCTACGTGTACGTGGACCCGGCCTACACCAACAACACCTCCGCCTCCGGCACCGGCATTGCCGCCGTGACTCACGACAGAACTGCCCCGGATAGGGTCATTGTCCTGGGCCTGGAGCACTTTTTCCTCAAGGACCTGACGGGGGACGCCGCCCTCCAGATCGCCACCTGCGCCGTGGCCCTCATCTCCTCCATCGCCACGCTGCACCCCCACCTGGAGGATGTGAAGATAGCAGTGGAGGGCAACAGCAGTCAGGACTCAGCCGTGGCCATTGCCTCCATCATCGGGGAGTCCTGCCCCCTGCCCTGCGCCTTCGTGCACACCAAGGACAAGACATCCAGCCTGCAGTGGCCCATGTACCTCCTGACCAACGAAAAGGCCAAGGCCTTTGAGAGGCTCATCTATGCCGTCAACACCGCCAGCCTCTCGGCCAGCCAGGTCACCGTGTCCAACACCATCCAGCTCTCCTTCGACCCCATCCTATACCTCATCTCTCAGATCCGGGCCATCAAGCCAATCCCCCTGCGCGACGGGACGTACACCTACACGGGCAAGCAGCGCAACCTATCCGACGACGTGCTGGTGGCCCTTGTCATGGCCCATTTTCTCGCAACAACACAGAGACACTCGTTCAAGAAAGTTA
s NC_004367.genome 103310 1325 - 149696 TGGCATTCAACACCCGTAATATCTAATAAGGTACAGATGTTTTCTAGCCTCTGGAACCCCTGACAGTCAGTCTCAAATAGTGGTAAAACTGATGAATACACGACAGATGTAATATGATCAAAGTCATTGGTTTTTAGCATAAGTACCCTCTGAAAGTCCAGTTCACTAAT----TCTCGCCTCCTTTGTT-----TTCTCAGAGTATTCGGGGTCAGACATTTCACCTTCTGTACGTTGACGAGGCAAACTTTATTAAGAAGGAGGCACTTCCAGCTATTTTGGGTTTTATGCTTCAGAAGGATGCAAAGATAATCTTTATATCCTCCACCAACTCATCGGATCAGGCCACCAGTTTTCTATATCGCTTAAAGGACGCCCATGAGCGCCTGCTGAATGTTGTGAGTTATGTTTGTGATGATCACAGGGAGGAATTTGACATGCAAGACTCTATGGTGGCTTGTCCTTGTTTCAGACTGCGTATTCCCTGCTACATCACCCTGGACATAAATATACGCACTACTACCAACCTATTTTTGGAGGGTGCGTTTAGCACGGAGCTTATGGGTGATGCTACGTCCATTGCAGAGCAAGGTTTAAGTAGGATTATCGGGGAAGAAGCGCTTACTCAGCTAGAATTGTGTAGGGTTAACACACTTGAAAAGAGTGTGGTTGACCGGCTAGGGTCAACCCTATATGTGTACATAGATCCCGCCTATACTAACAACACGTCAGCTTCTGGGACTGGAATTGCCGCTGTGACCCTGGCCAGGCACAATCCTACACGAGTAGTCATTTTAGGCCTGGAGCATTTTTTCCTTAAGGATCTAACAGGCGATGCTTCCCTACAGATTGCCACATGTACCCAAACTCTTATCTCCTCCATAGTTAGCCTCCATCCCCATCTAACTGAAGTGAGAGTCGCCGTTGAGGGCAACAGCAGTCAGGATGCTGCGGTTGCCATAGCTACCATCTTGGACGACATATGTAATCTGCCCTGTTTGTTTGTTCATACACAGGATAAAGCCTCAAATCTACATTGGCCTATGTATCTCCTAACTGGAGAAAAATCCAAAGCGTTTGAAGCATTCATTTATGCTGTTAACACGGCCAGTATTTCTGCGAGTCAGGTCATTACATCAAACACTATCCAGCTCTCCTACGATCCAATATCTTACCTCGTGTCCCAGATTAAGGCAATCAAGTCAATTCCCCTGAGAGACGGAACTTACACCTACACTGGAAAGCAAAAAAACCTATCCGATGACGTCCTAGTCTCCCTGGTACTCGTTCACTATCTTGCAGTTTCACAGAAGCATACATTCAGGAAAATTA

a score=23219.0
s NC_007605.genome 118058 751 + 171823 ATTAAACTTTATTGACTACACCAGTCCCTTGTAAAGCGACGG----------------------------GTCTCGCGTGACGGCATTCGTGAGCAGGGCTTCGTCCAGGGGCTTGTTCTTGGCGGACATCATTAGCCCAGCCGCAAATATCAGAATTAGCATCAGAAAAGTGAGCCCCACAAACACCAGTGTCCAGAGAGGAAGACCGTAAGATAAAGATGGCTGCCTCTCATCTGGAACGGTGGGAAGCTCAGCAGTTGTTTTT---GTGGCATTGG-----ACGTCCCTT----------TGGAGG-----------ACAGCGTGGGGGCCAA----GGTGGTAGCGTTGGTAATACGGGTAGTAGCACTGGTGGTGGAGGAGGACC---------------------------------------------------TGGTGGTGACATTG---------CTAGTCACACCCGTGGAGGTTCCTGTTCCGGCCTCGGTGG------CAGTGATGTTCTGTGCAGTAACCTTAGTGGT----------GACATTGATGGTGGATGCGTTGGAAGTTGTTGGGACTGGTGTGACAGTTGTCCCAGTGAATGTCACCGTGGTTGTGTTGGTGCTCAGAATAGCAGTTGTGGTTATAGGGGCGCTAGTCGTGGTCAAGGTCGTAGACTGGTTTGTGCTAGGACCCGATGCCGACGGTGATGGTGTAGTCACAGCCGTTGTGCCTGTCACGTTCCCCGCCGAGGCCGTCGAACTGCCACTAGATGTCCAAATAAGGCTTGTCTCACAGATGAGTATCATGGCCATAACAGCGCCTGCCTTGTCTCTGGCGTGTGCCATCGCGTCTGGACGCAGAAGGCCTCCCGGCCTC
s NC_006146.genome 111925 854 + 171096 ATTAAAATTTATTGATCACACAAATCCCTTGTAAAGAGACGGATCACACAAATCCCTTGTAAAGAGACGGGTCCCTCGGGGCAGTGCTGGTGAGCAGGGCTTCGTTCAGGGACGCGTTCTTGGTGGCCATCATTATACCGGCCGCAAAGATCAGAATCAGCATCAGAAAAGTGAGGCCCACAAACACCAGGGTCCAGAGAGGGAGACCAGTCAGCGAAGACGGCTGTTTCTCGTCAGGTGGGGTGGGCAGCTCAGCGGTGGTTTCTTCGGTGGCGTTTGCAGTGACATTGCTTGGCTCGGGGGTGGAGGTGGTGCTGGTGGTGGCCTCGGTGCTGACATTGGAGGTAGCGTTGGCGGCATGTGTGGTGGCATTGGTGGTGCTGGTGGCCTGGGTAGTATTGTTGGACAGGGTGGCGGCCTGGGTGGTTGCAGTTGTTGATATGGTGGTAGCATTAGAGGTGGCATTGGTTCCAGTAGTGGGGGGCTGGGTTGATGCCCCCGTAGATGTATTGGCGCTGGTCTGTGCAGTGGCATTGGTTGTACTTTCCCCGGTTGTTGGTG-TGGTTCCATTAGAAGTTGTGGACGCCGCAGGGGCTGCCGTGCCTGTGGATGTCACCAGTGTTGTGTTTGCGCCCCCTCCGGCCGTGGTGGTCACTGGGCTTGTGGTCGTTGTCTGGGTTGCTGTCTGGTTTGTGAC------------------------TGCCACTGCAGATGATGTGCCTGTGGCATTTGCAGGCGCTGGTGTAGAC---------GAGGTCCATGCCAGGCTGGTCTCACAGATGAGCATCACAGCCAGAACGGCTCCTGCTTTGCCTCCGGTGATTGCCATCGTGTCTGTCAGCAGAAGGCCACCGGGCCCC

a score=8748.0
s NC_007605.genome 118809  95 + 171823 TTTTATAGCTAGTCTCCACACCCA----ATAC---------------TCTACTGAACCATCACATACATGACCTCCTCGAGGTATGCAGGGAATGAGCGGTCCGTGAGCCGGTC
s NC_006146.genome 112779  99 + 171096 TTTTATAGCCCTTGTCCACGCCCCCGGTGTGC---------------GCTACTGAACAACCACATACATCACCTCCTCCAAGTATGCAGGAAATGAGCGGTCCGAGAGCCGGTC
s NC_004367.genome 105233 110 - 149696 TTTTATGGCCATCTTCCAGGCGCG----ATTCTGCCTTGGCTCCTCTGTCACTTTACCTCCAGGAGAATCGCCTCCTCTTTGTAATTAGGGAAAGAGCGATCAGACAGCATGTC

a score=1334.0
s NC_007605.genome 118904 128 + 171823 AACACGACATTGCTTCCGTTTCATGCCTCCAGCTGCCCCTGACCAGTTAGGACCCTTGACGGATGTCTTTAACGGCGCGGTGCAGTTGGTCACCAATGACGGCCTAAAGGCCAACACATCCTTGAAGC
s NC_006146.genome 112878 128 + 171096 AATGTGACATTGCTTTGGCTGTGTGCGCTTGGTGTCCCTCTGCTGCATCTTAACTTTACCGGCCGGGGCCAATGTCCCGGTGCAGTTAGTCCCAGTTGAGCTGCCGCCACTTAGAACATCTCGGAAGT

a score=30510.0
s NC_007605.genome 119032 379 + 171823 AGGGCGTAGGAATGGTACCAAACTCGGGGCCCA----CCCCATCAAAGACATAATATGTCTCATAGTGGCAGTGATGATGCATCACCACCACAGCACTCGCCAGGACCCTCTGCATATCTTGTACAAGGCGCCTTTCAACTCGGCCACTGGCTCTGGTGACGTTAAATG--------TCCTGTTCCTATTAGTCACAGCCTGTAGATTTGGGCACCCAGACTCAAAAAGTGCAGCTACATG----AAGGGCAGCCGCCTCAAATCCACCATGACCCCCATGGCTGTCCGTGTTGTTGGGGTAATAAGTCACATTGTTAATGACCACGGCCGGGATAAGGGTGTAAACCTTGCAGAATGGATTGGTCGGACACCCATAAGACAGGGGCACCCCAAA
s NC_006146.genome 113006 379 + 171096 TTGGCTTTGGAATTGAGCCAAAGTCTGGGCTCG----TCCTATCGAAGAGATAATACGTCTCGTAGTGGCAGTGGTGATGCAGCACCATGGCGGCGCCGGCCAGCGCCCTCTGCATGTCCTGGACAAGGCGCCGTTCCACCCGGCTGTCGGCACCGGTAATGTTGAATG--------TCCTTTTCCTGTTTGTCTCTGCCTGGAGGTTGGAGCACCCGGCCTCGAAAAGCGTGGCAACATG----CAGGGCGGCTGCCTCAAATCTCCCACGCCCCCCGAGGCTATCCGTGTTGTTGGGGAAATAAGTAACCCCGTTGATGACCACGGCCGGGATGAGAGTGTAGACTTCGCAGAAGGGATTGGCCGGACACCCATAAGACAGGGGCACGCCAAA
s NC_004367.genome 105516 379 - 149696 TTGGTGCTGCGATTGAACCCATTCC----CTCTTTTCCCCCGTTAAACAGATAGAAAGTTTCATAGTGGCAGAAATTGTGAAGTACAAACCAGGCCTTGGCCAGGACCTGCTTCACATTATGC---AGGACTCTCTCACCACG-----TGGCTCAGATGCTTTCAGAGAAGAGATCCTTCTGCCCCTGTTGGTTATAACATCTATGTTGGTGCAACCCGTTTTTATCATGGATACAACATGTTCCAGCGGGTGTTGGAAGGAAACGCTCAGGCCGGCAGA----ATTCGTGAAATTCGGAAAATAAGTCTCTCCTTCAATCTTTATAGCCGGAACCAGGGTGTAGACGTTGCAAAATGGCTTTGGTGGACAGCTATCTCTTAAAGGGTCTCCAAA

a score=24940.0
s NC_007605.genome 119411 565 + 171823 ATCACGCCCCTTACCCCGAAGCACCTTGGCCCCCACCGGCATAAAGCTGGGCAAAAAGAGTGGGTTAAAACCAAAGGCGAGTAGGGCCAGGAACGCCAAATAGCAGCAGTAATAGATGAAAACAAAGCTCAGCATGAAACAGCGTGGAGGCTCAGCTAGGGTCTCTGCCTCTCCATCATAGACATCTTCCTTGAATCTCATTCTCTCACCGCAT---ACCTCGCTCTTCATCCAGGAGGGGGCCATGGCTGCCATTCTACCAGTTAACGAGGAGAGAGAGAGTAGGTCCGCGGAAATTGGTGCCCCTCTCTGCCCTCCTGACGAGGCCATGGTGTCATCCATCTCCGCAGTCCGTTCTTCAGCTTTGGCATTGGTCCGGGTCCGGGTGGTCTGATTTTGATTCTGATCCTGGGTATTGGTCTTGGTCTCTCCTCCCCCATTGGCATGGATTGGC-ATAGGTGGGTGTGGCTCAGGCTCAGGTTCCGGCCCTGGGACGGCAGCAGCCGCCGGGACGGTGAAGTCGTGGAAGGTAGAGGCCCGTCCCTCCCGAGGTCGTGGGGCCGGAGCC
s NC_006146.genome 113385 514 + 171096 CTTGTGGCCCTTTTCCTGTAGCACCTTGGCCCCCACCGGGACAAAAGTGGGAAGGAAAAGGGGGTTGAAGCCGAAGCTGATCAGCCCCAGTAGCGTCAAGTAGCCCAAGTAGTAGATGAACACGAAGCTCATCATAAACCAGCGCGGTGGCTCGGTCAGGGTCTCGGCGTCTCCATCACACACGTCTTCTTTGAATCTCATCTTCCCACCGCTTGTCACCTCGCTCTTCATCCAGGAGGGGGCCATGGCCGCCATTCTACCAGTTAACGAGGAGAGAGAGAGGAAGTCCGCGGAAGTTGGCGCTCCATGCTGACCCTCGGGAGAGGCCGGGTCGCCAGTC-TCTCCGTCGCCTGCCC--CGGCGCTGGATGTTGTCTCGCCCCCGTTGCGCTGAT----------------------------------------------------GGTCGACGAGAGGTGGCTCGGGCCCGGGCCCGGCCTCCGGCCCGGGGACGGCGGCGGCAGCCGGGACGGTGAAGTCGTGGAAGGTAGCGGCCCGTCCCGTCCGGGGCTGCGGGGTCGGAGAC

a score=14802.0
s NC_007605.genome 119976 92 + 171823 TTATAAAAGACTTCCACCCTCTCCCCGCTGGCCAAGACACGCCGCTCGTGGACCACGCCATCTTCCTCCCGGCTGATTGTGTGGCTGACGGT
s NC_006146.genome 113899 92 + 171096 TTGTAAAACACTTCCACCCTCTCCCCGCTGGCCAGGACGCGCCGCTCGTGGACTACGCCGTCTTCCTCCCGGGTGATGGTATGGCTGACGAT
s NC_004367.genome 106202 92 - 149696 TTGTAAAAAACTTCCACGGTTTCTCCAGAGGACAGTTTCTGCTTCTCATGCACCACACCATCCTCTTCCCTACTAATCGTGTGGCTGATTAT

a score=2726.0
s NC_007605.genome 120068 50 + 171823 GCCGTGTTCCACCGCCACTTGTTCATCGACCATGGTACCCCCTTTATCTT
s NC_006146.genome 113991 49 + 171096 GCCGCACTCCACCGCCACCTCCTCCTCGGCCATGGC-CCCCTTCTATCTT

a score=845585.0
s NC_007605.genome 120118 5529 + 171823 [encoded data, 5584 characters]
s NC_006146.genome 114040 5545 + 171096 [encoded data, 5584 characters]
s NC_004367.genome 106461 5511 - 149696 [encoded data, 5584 characters]

a score=7252.0
s NC_007605.genome 125647 132 + 171823 TGCCGCGTGGTCCCGCGTC-GCTTCCTAGGGACCTGTAAGCGAAACTCTGCAAAGATGCTGGCTCATCTGAATCAGGTTACCAGGATCCCCCCCTGTCCGCCCTTCAGCGGGCGGGAGGCCAGACTCAAGTTC
s NC_006146.genome 119585 133 + 171096 TGCCGCGTGGTCCCACGTCGGTTTACTAGCCACCTGCGGTCGCAATTTTGCCGGGATGCTGGCTCATCTGAAGCGGGTGACCAAGATCCCGCCCTATCCCTCCTTCGTCGGGCGGGAAGACAGAGTCAACTTT

a score=8442.0
s NC_007605.genome 125779 64 + 171823 CACTTCTTCTCCTGGAGCACATTCATGCTGTCATGGCCAAACAATGCCACACTCCGGGAGATCA
s NC_006146.genome 119718 64 + 171096 CACCTCTTCTCCTGGAGCACGTTCATACTGTCCTGGCCCAACAACGCCACCCTCCGGGAGATCA
s NC_004367.genome 112101 64 - 149696 CACTTGTTTTGCCTAGGGTCTCTTATGTTGAGTTGCCCCAATAACACTATCCTCCGAGAGCTTA

a score=19926.0
s NC_007605.genome 125843 374 + 171823 GGACGAGGGCCGCCACCAACCTCACCCACCACCCACATCTAGTGGATACTCTGTACCACGCCTCTCCGCAGACCCCATTTCTGACACGCAGCGGTGCTCTATACCGCTTCGTCACCTGTTGCAACTGCACCCTGCCCAATATCTCCATCCAGCAGTGCAAGGCCGGGGACAGACCGGGGGACCTGGAGATCATTCTACAGAGTAACGGCGGAGGGAGGCCCGCGAGCTTCCAGTTCCCCTCCTCCCCAACTGGCTCCCTATTGCGATGCATAGTTGCTGCGTCCCTGCTGCCGGAGGTGTCCGTGGGGCACCAGGAGCTGTCTCCG--------CTGCGGTCCAGAAG-CCAGGGAGGGCAGACGGATGTCAGGTCGGGCCCG
s NC_006146.genome 119782 380 + 171096 GGACAAGGGCCATCACCAACCTCACCCGCCACCCCGGCCTCGTGGATGCCCTGTACCACGCCAGCCCGCAGACCCCCTTCCACACCCACAGCGGCGCCCTCTGCCGCTTCGTCACCTGCTGCAACTGCACCCTGCCCAACATCTCAATCCGGCAGCGCAAGGCGGGGGACCGGCCAGAGGACCTGGAGATCATTCTACAGGATAACAGCGGGGGAAGGCCAGCGAGCTTTCAGTTCCCATTCTCCCCCCGTGGCGCCCTCTTGCGGTCAGTGTTGGCAGCGGCGCTGCTGCCGGAGGTCTCGGTGGGGGGTCAGGAGACGCCTCGGAGACACATCTTGGGCACGGAGGCCCAGGCCGCACCCGCG---GCCAGTCCGGGCACA

a score=7544.0
s NC_007605.genome 126217 62 + 171823 GACCCGGCCCGGAGACTGGTGGCCCTCCTGCGAAGGGAAGATGGGGCACCTAAAGACCCCCC
s NC_006146.genome 120162 62 + 171096 GACCCCGCGCGGAGACTGGTGGCGCTGCTGCGCCGGGAAGACGGAGCCCCCAAGGATCCCCC
s NC_004367.genome 112635 62 - 149696 GATCCATCTCGCCACCTAGTGTCTATGCTACGAAGGATTGAAGCAGCGCCAAAGGACCCCCC

a score=3233.0
s NC_007605.genome 126279 99 + 171823 TCTGGGACCGTTTGGACACCCCCGGGGGCCCGGCCCGGCCAAGAGCGAAGACGAGGAGTCTGAGCGTCGAGACGCCCCTCCACCCCCGCTCGATTCCAG
s NC_006146.genome 120224 99 + 171096 CCTGGGACCGTACGGACGCCCGTGTGCCCACACCACCGAGGAGAGCGAGGACGAGGACGGCCCCCTTCCCGACGCCCCGTCGCCCCCGCTCAACGCCGG

a score=655021.0
s NC_007605.genome 126378 5708 + 171823 [encoded data, 5833 characters]
s NC_006146.genome 120323 5708 + 171096 [encoded data, 5833 characters]
s NC_004367.genome 112775 5694 - 149696 [encoded data, 5833 characters]

a score=17909.0
s NC_007605.genome 132086 280 + 171823 CCGGCTCGTGGAGTCCGCACCTCCTTCTGTGCACGAAGTTTTGCGGAACCAGGAGAAGGGGTCTGGCGTCTTGCTGGGGCCACACTCCCGGCTACGGGGCTTCGGGGTAGGGGCAGTAGGCTTTTGGTGTGCGGGTGCTGGTGGCTGGGCTCCCCTGGGCAGGGTAAAGGGGCACGATGTGTGCCGGCTACCCGGAGAGTTTCCAGTATTAGATGTCACGGCAGCCTGGGTCCGGCACGGCACCCTCTCCCCAGACAGTCCGGTCGGAGCCATCAAGGGG
s NC_006146.genome 126031 280 + 171096 CCGGCTCGTGGAGTCTGCGCCTCCGTCGGCGCACGAGGTCTTGCGGAGCCAGGAGAAGGGGTCTGGCGTCTTGCTGGGTCCGCACTCGCGGCTGCGAGGCTTGGGAGTGGGGGCGGTGGGCTTCTGCTGCTGGGCCGGGAGGGACTGGGCTCCCTTGGGTAGGGTAAACGGGCACGAGGGGCGCCGGCCCCCTACAGAGGTCCCAGTATTAGACGCTGCGCCCCCCTGAGCCCGGCACGGCACCCTCTCCCCCGAGAGCCCGATTGGAGCCATCAAGGGG

a score=448121.0
s NC_007605.genome 132366 5103 + 171823 [encoded data, 5400 characters]
s NC_006146.genome 126311 5156 + 171096 [encoded data, 5400 characters]
s NC_004367.genome 118941 5033 - 149696 [encoded data, 5400 characters]

a score=76480.0
s NC_007605.genome 137469 1426 + 171823 GCGTGTTAGTACCTGTCCATTCACAGGGGTATCCAGCCCTTGCGCCGCCTCCCCCAGCCCGCCAGCCACCCCAGACAGGAGATGATAATGATGAGGAGCACCGGAGCCACCACAGCACAAGTGATTAGGAGCAGGGCCCAGTGCACCCAGGTGGTCTTAGGGCGCCAGGGATCGATTGGAAAAGGGCCCAGGGTCACTGGCTTATGCGTGGGACGTTTAGAAACAGGCCGCCTATGGGGCCTGTGACTGGTGCTTGTGGTGTGGGAGACTAATGTGGTGGGGGCT---------------ATGGTAGTGGCTGGGATAACAGTAAGATGCATACGCTGAGTGAGGGTCCGGTTGGCATGGTATTGGTCGTCTTCTTCCCCTGCAGAGTAATTGCAGTGGACCCCGGAGGCCACACTGCAATTTCTCAGTGTCACATTGCACGTGTAGTAACCTGCATGCGCAAGGGTCACATTGGGGATTATCAGAGAGACGGAGGTGTTGGAGTCATTTACCCATTCTAGGGTAAGGCTATAATTGTAACCCCCGTTAGTTATATGAGTTCCGTTGTTGGAAGTAGCTACGGCCAAGGGCAGTTGTCCATCCCCGGGAGTGTATCCCCGGCCCAACTCGATCCGAGAGACCGACTCATTGCTAGGAACGCTGCAGGTGAGATTCACTCTAGCACCTGCATGGGCGGTGACATTTTCAAATTTAACCAGATCTGAGAAAAATGCACAAACAGACCCCACACAGCAGCACAATAGAAGCACTAAATGAGTCATTCCTAAACTGTCAGTTTTAAAACTCCCTGCTTCTCAGGCCTAAATATGTGGTGGGGTGTGCTTAGGATCACTTTCATATTCTGCAACAACAGCCATACCCGGAAGAGGAGCTGCCGGTTGCCATTTTTCAAGCTGCTAAACCACGAGTGGCAGCAGGCCTAAGAAGCTCCTC-AGCAACATGGAGACCTCGAAGGGAAACTGGCAGGAGCAGGGAGTCACGTAGGCACTAGCCTCTTCATGTGAGGTAAGAGATCGCTAAAAATGGGATCAGGGTATGTAAACCGAGTTTTGCGGGGGATGGTGAGCCAGACACGGCGGGTGGGG--GAAGGAGCTGACACGATTGAGTAGAAAGGG-CCAAAAATACACCAGCTATAAGGAATTGCTCAGGCCAAAGTTGTTCCTCAGGTGGCTTTAGGCCTAATGTAGGCAATTGCGTGCCTAGAACATTGCTAATGTGCCCTGGGTTTCCTGCCTTCATGCAAATATTCTACCTCCCCCGGCCTGGTGCAAAATGTCTGCCTCAGAATACTAACAGCTAATCCAAGCTAACATTCTATCAGT-AAACGGGCAGAAAACTGATAAGGACCGCGGAGTTT-GGCCCTCCGCGGTGTCCGGTGGTCCTCACACGTGCCCTC----CCCCCGGGCCGATGGCTGAGGCCC
s NC_006146.genome 131467 1443 + 171096 GAGTGTCAGTG-GTGTCCATTCACACGGGTATCCAGCCCTTGCGCCGCCTCCCCCAGCCCATCAGCCACCCACAGCAGGCAATAATGATGACTAGGATTACCGGAGCCACCACGGCACAAGTTATGAGGAGCAGGGCCCAGTGCACCCAGGTGGGTCTGGGGTGCCAGGGATCGACCGGGAAAGGGCCCAGGGTAACCGGGCGCCGAGTGGGACGTTTGGTGGTGGGACGCCGGGTGGTTTGGTGACTGGTGCTTGTGGCGGGGACTACTGTGGTAGTGGGGGCTGTGGTAGTGGGGGTGATGGTAGTGGCCGGGATAACTGTGAGATGCATTCTCGCGGTTAGGGTCCGGTTAGCATGGTATTGTTCATCGTCGTCCTCCGCCGTGTAATTGCAGTGGACCCCGGAGGCCAAACTGCAATTCACCAGGGTCACATTACATATGTAGTCCCCCTCGTGTTCACTTGTTAGGTTGAAAAAGGTCAGGGTCACTGAAGTGTTGGTGGAATCTGTCCATTCTAGGGTGAGAGTGTAATTGTGATGCCCACTATAAATATGAGTTCCATTGTTGGAAGTGGCTACGCCTAGTGTTGGAATTCCATCACCGGGAGTGGATCCCTTGCCCACCTCTATATGAGAAACAGTCTCATTCTTGGGAACACTGCAGGTGATGTTGACTTCTGCACCTGCAGGGGCGGTGACATTCTCAAACTTGACCAAGTCAGAGAAAAAGGCACAAACAGACCCCACACAGCAGCACAATAGAAGAGCTAAATGAGTCATTCTT-AACTGACAGTTTTGGAAGCCCCATCATCTCAGGCCTAAATACGTGGTGGGGTGAGATTAAGAGCACTTTCATATTCTATAATCGCAGGCTTAACCGGAAGAGAAGCTGCCGGTTGCCATTTTTCAAGCAGCGCAGCAGAGAAAGGCAGCAGGGGAAGAAGGCTCCTCAAACAGCATGGATCTCCTCGGGTTAAAGAGGCACGGGCAAGGAGTCACGTAGACACGGGCCTTTTC-TGTGAGGTAAGAAATCACTAAAAA-GAGCCCAGGATGTGTAAACAGACTTTTGCGGGGGATGGTGGGCCAGACACGGTGGGTGTGGAAAAAGGGGCTGAAACACGCGAGTCGAAAGGGTCCCAAAATACACCAGGCATCAGGAATTGCTCAAGCCAAAGTTGCTCCTCTGATGGCTATAGGCCCAAAGTATACATTTGCGTGCTTGGAACTTTGCTAATGTGCACTGTGTTTCCTGTCCGCATGCAAATACTCTA-CTCCCTCAGCCTAGTCTAAGATGTCTGCCACAGAGCCCTAGGTGCTTAGCCAGACTGTCATTCTATTGGTAAAACGGGCAGAAAACAGAAAAGACCCGCGAAGTTTGGGCCCTTCACGATGCCCGGTGGTCCCCA---GTAGCCCCGGTTCTCCGGGGCCGGATGCCGCGGTCC

a score=0.0
s NC_007605.genome 138895 44 + 171823 GGAATATGCAAGTGCATCTTTCTAACCAGTAGGGGCCTCCACCT

a score=163099.0
s NC_007605.genome 138939 4174 + 171823 [encoded data, 4567 characters]
s NC_006146.genome 133270 4179 + 171096 [encoded data, 4567 characters]

a score=10091.0
s NC_007605.genome 143113 268 + 171823 TGGAGCTCGGGG--GGCGGCCGGGTGGCCCACCGGGTCCGCTGGGTCCGCTGCCCCGCTCCGGCGGGGGGTGGCC-GGCT--GCAGCCGGGTCCGGGGTTCCGGCCCTGGAGCTCGGGG--GGCGGCCGGGTGGCCCACCGGGTCCGCTGGGTCCGCTGCCC-CGCTCCGGC-GGGGATGG-------------GGGTGCGCTCCCAGG--CCGGACCCTGGTG-CCAGG---CAGGGACCCCG-----CGC---CACCCGCTTCATGGGGGGGGAGGCC--GCCGCAAGGA-----CGCCGGGCCGGCTG
s NC_006146.genome 137449 271 + 171096 TGGAGCTCGGGGCCGGGGGCCGGGTG-----------CCCCTGGGTCCGCTGCCCCGCTCCGGCGGGGGGTGGCCGGGCC--GCTGCCGGGTCCGCTG-CCCGGTCCTGGAGCTCGGGGCCGGGGGCCGGGTG-----------CCCCTGGGTCCGCTGCCC-CGCTCCGGCGGGGGGTGGCCGGGCCGCTGCCGGGTCCGCTGCCCGGTCCTGGAGCTCGGGG-CCGGGGGCCGGGTGCCCCTGGGTCCGC---TGCCCCGCTCCGGCGGGGGGTGGCCGGGCCGC----------TGCCGGGTCCGCTG
s NC_004367.genome 126111 233 - 149696 TGGGGCTCCAGG--CCCGGCCGTGGG----------------------GCT--CCAGGCCCGGCCGTGGGACTCCAGGCCCGGCCGTGGGGCTCCAGG-CCCGGCCGTGGGGCTCCAGC--CCCGGCCGTGGG-----------GCTCCAGGCCCG--GCCCATACTGCGGC--------------------CCAGAACCGC--CCAGCTCCTGGAGCTCCCAGCCCAGG---CCAGGACCCCG-----CGCTTGTTCCCGGTTCATTCGGGGGGGGGCC--GCGACCTGGAACCTGTCCAGGGCCG----

a score=60786.0
s NC_007605.genome 143381 802 + 171823 GGAGGTGTGCACCCCCCGAGCGTCT-GGACGACGCTGGCGAGCCGGGCCAGCTCGCCTTCTTTTATCCTCTT-----TTTGGGGT-----------CTCTGT--------GCAATACCTTAAGGT-TTGCTCAG--GAG------------------------------------------TGGGGGGCTTCTCATTGGTTAATTCAGGTGTGTGATTTTAG---CCCGTTGGGT--TACATTAAGG-TGTG-----------TAACCAGGTGGGTGGTACCTGGAGGTCATTCTATTGGGA-TAACGAGAGGAGGAGGGGCTAGAGGCCCGC----GAGATTTGGGGTAGGCGGAGCCTCAG-------GAGGGTCCCC---------------TCCATAGGGTTGAACCAGGAGGGGGAGGA--TCGGGCTCCGCCCCGATATACCTAGTGGGTGGAGCCTAGAGGTAGGTATCCATAGGGTTCCATTATCCTGGAGGTATCCTAAGCTCCGCCCCTAT--ATACCAGGTGGGTGGAGCTAGGTAGGATTCAGCTAGGTTCCTACTGGGGTACCCCCCTACCCTACCTTAAGGTGCGCCACCCTTCCTCCTTCCGTTTTAATGGTAGAATAACCTATAGGTTATTAACCTAGTGGTGGAATAGGGTATTGCAGCTGGGTATATACCTATAGGTATATA---------------GAACCTAGAGGAAGGGAACCCTATAGTGTAATCCCTCCCCCCCCTACCCCCCCCTCCCTTACGGTTGCCTGAGCCCATCCCCCACCCCAGCACCCCGGGGTGACGTGGCACCCC-GCGTGCCTTACTGACTTGTCACCTTTGCACATTTGGTCAGCTGACCGATGC--TCGCCACTTCCTGGGTCATGACCT--GGCCTGTGCCTTGTCCCATGGACA--ATGTCCC
s NC_006146.genome 138237 813 + 171096 GGGGTTGTGCACCCCCCGAGCGTCT-GGACGACGCTGGCGACCCCGGCCAGCGCGCCTTCTTTTATTCACTT-----TTTGGGGG-----------CGCTGT--------GCAATACCTTAAGGT-TTGCTCAG--GAG-------------------------------------------AGGGGGCTTCCTATTGGTTAATTAAGGTGTGTCATTTTAG---CCCGTTGGGT--TACCTGCAGG-TGTG-----------TCCACAGGTGGGTGGTACCTGGAGGTGATGCTATTGGGATTAACGTGTGGGGGAGGAGCTA-AGGTCCGC----GAGATTTGGGGTA-GCGGAGCCTCAG-------GAGGGTCCCC---------------TCCATAGGGTTGAGCCAGGAGGGGGAGAA----ATTCTGCGCCCCAATATACCTAGTGGGTGGAGCCTAGAGGTAGGTTTCCATAGGGTTCCATTATCCTGGAGGTATCCTAA-CGCCGCCCCTAT--ATTCCAGGTGGGTGGAGCTAGGTAGGATCCAGCTAGGTTTCTACC-GGGTGCCCCCCTATCCTACCTCGAGGTGCGCCACCCTTCCTCCCTTCGTTATAATGGTAGCATAACCTATAGGTTATTAACCTAGTGGAGGAATAGGGTACTACAGCTGGGTATATACCTATGGGTATATACCTATAGGTATATAGGAACCTAGAGAAAGGGAACCCTATAGTGTAATCCCTCCCCCCCCTACCCCCCCCT-CCTTACGGTTGCCTGAGCCCATCCCCCACCCCAGCACCCCGGGGTGACGTGGCACCCCTGCGTGCTTTTCAGGTGCATCACCTTTGCACATTTGGTCAGCTGACCGATGC--TCGCCAC-GCCCGGGTCATGACCT-GGGCCAGCGCCTCGTCCCGAGGCCCCTCTGTCCT
s NC_004367.genome 126344 822 - 149696 AGCGGTCTA-GCCGCTTGGGCGTCCAGAACGCCACTG--AACCCGGGCAGGCGCG-CTCCTTATATTCAGTTCTGTCCTTGGGTGTGTCCCATTCTCTCTATTCCTATTGGTTAAACCTTAAGGTCTCACTCAGCTGAGTTATTCCTTCTGGTTTCTAGTGTTCCTATTGGTTCCTACCTATAGGTCCCACCCTACAGGTTAATCCTCCTGGTTCAATCTGGGCTCCTATTGGTTAATACCTGTAGGTTGTGACCCACAGGGTTACTCAGGTGGGTAAT-CCTGGAGGTAATTGCATTAGGT-GAACGGGAGGAGGGAG------GGGTTTGCAGCTGAAATTGAGAATGGGCGGAGCTAGAGACCTGCTGAAGCTCCGCCCTCTGGGTTGTAGTCCCATTGGGTTTAATTCAGTGGGGGGGGGGTTTGGGGTTC-CCCCGATATACCTAT-----------------------------AGGTTCCACCCACCGGG-------TTAAACCCCGCCCATTTTAATTCCAGCGGGA-----------------------------TACC-------CCCCCTATTCCACTGCCGTTTATCCTATAGAATTTCCGCTGGGTTCCACAGGAGGGTACCCTTCGGTAGGTACCCCTACCGGTAGGTATTGGTACTACAGGCGGGTATATAT-----AATATATA--------TATAGGAGAACCTATAGGA--TTAACCTAGAAGAGATACCTAACCCCCCCCTAACCCCCCCCTTCCCAAATGTAGGTCACCCCATCCCCCACTC-------------TCCATTGGCCCCATTGCGTGCCTTTCACCTCTGTCATCATTACACATTCAG--AGCACACTCATTCCTCCGGCAT-TCAGGGGTCA--ACCGGGGGACACGTCCCCGTCCCGCGGACA-TTTGCCC-

a score=26373.0
s NC_007605.genome 144183 698 + 171823 TCCAGCGTGGTGGCTGCCTTTGGGATGCATCACTTTGAGCCACTAAGCCCCCGTTGCTCGCCTTGCCTGCCTCACCATGACACACTAAGCCCCTGCTAATCCATGAGCCCCGCCTTTAGGAAGCACCACGTCCC---------------------GGGGACGGAAGCTGGATTTTGGCCA--GTCTTCAATTTTGGGGAGTGGTTTTGTGTGAGCCGGAAGTTGGCAATGGGGTGAGGGTGGCGCTGGTTAAGCTGACGACCTCCCAAGGTCTCTCACCCTGGGTACACAGGTGGGGCGGCAGCCTCTAAC-----TTTGGCTGTGGCCTCTATTTCCT-CCCTTTCCTAG--CCAGGGCCATGTGTTCCTGC-ATGTCTACTTGCCTCCTGTGGTGGCAGA--GCTTGGCCCTGGGCCCAACCCCCGCCTTGGGAGCCTGTAGGGGCCAACACCCTTGGTTTGTTTGTGTTCCTGTTTGCTGGCAACTTACTGGCAGCCGAGCAGATTCTAATGGGCGCCCGCCTTCTTTCTCTCTTGTTTTATTAATAGAATCTCAGCCAGGACCTATACCTGAGACTTCAAAGTCTGGTCCTGGGTTCTGAGACCCCCAAGATTTGTCATGCACACCTGCACACCTGTTGGTATTGGGTTTCTATTCTTGAGTGTGAAAGT--TTGTAAAAAAATTCATAAAATGTCACTAATTCCTCTTACCTGTTTAGGGTATTGTGCA
s NC_006146.genome 139050 684 + 171096 CCTAGCGTGTCGCCTGCCTCCGGGATGCATCACTCTGAGCCACTAAGCCCCCATTACTCGCCCCGCTTGCCTCACGGTGGCTCACTAATCCCCCGCTAATCCATGTGCTCCGCCCTTAGGAAACACCGCATCCCAGGGGCGGAAGCGTGGACCCAGAGGGCGGAAGCTGGACTTTGGCCACGGGCCTCGCCT----GGAGTTGGGTTGCGTGGGGTGTCAATTGG----GGGCTGTGGGCCGAACGGG---GGCTCCCGTCCCCCGG--------------GGGGGCGCCTGTGAGGCGGCTGTTGTTGTCAAAGGGGCGGTGGCAGCCGCGGTCCCCCACCCTTCCCTGGTCCCTGGGC--TGTTTGCCTGAGGTGTGTTTGTGACTGCTGAGGTGGCAGAGGGCCCGGCCTTGAGCCCATCCCCCGTGGTGTCAGCCTGTAGTGGCCAACACCCTTGGTTTTGTTTTGTTCCTG-TTGCTGGCAACTCACTGGCAGCAGAGCAGCCTCTAATGGTCGCCTG-CTTTTCTCTCTCTCGTTTTATTTATAGAATCACAGCCAGGACTGGTACCTGAGAGCTGAGAGTCTGGTACGTGGTT-TGAGA-CCCCAAGATTTG--------ACATGCACACCTGTTGGTATT--GCTTCTATTCTTGAACGTGAGAGTACTTAGTAAAAATGTCTGCAAATATCACTAATTTCTCTTAACTGGTTAGGG---------

a score=42916.0
s NC_007605.genome 144881 1202 + 171823 ATTCTTCAGCCTGCCTATTTTCAATTTGCCTAAGGTGGCAATTTAAGATGTGGTTAATTAACCATTTTCCTGTCTGACACCACTGCATGGGCAA-CCGGGTTCCATGGCACATTTAGAGATAAACATAGATGTCTTGTCTTGCTCATGTGCAG--------AGGAGGGGGTGTTGGTGTGCAATATAGTTTCTGGATTCCAAATTGAGTTGGGGGTGCTATTTTCACTATGGAATTAAATTACTGACATTAGACAGTGGACACCGGGCTATATGTGGGGATGTCTGTGGCTTGTCATTTCCTCTTAGAAGGTAATCCCCCATCTTAACTTCCCTTTAAATTGTGATGCAAGCCCTGGGTTATTTATAGAATGATTATCTAGGTTTGATAGTCTGAAGGCTGGGCAGAGAATGTT--TGTAATTTTTATTCACCTTCTTTACCCCCCACGAGTATCCAGTTCTAGAAGATCTCCTGATATCCCGGGCTGCCATTA-------------TTCCCTTGAGT----------------GTTATAGCTTCCTCTTAACTTA---AGCAAGAGCTCCAGGATGTTAGCTTTTTTGGTGGGGCTGGTTGTCAGGAAGAGGTTCCAGTGTTGTCCTTTATTTTTAGATGTTAGCTTTGTGTTAGGTTAGTATGGGCTGGGTATTCACTAGTGAAGGCAACTAACACAGTTAGACGTGCTAGTTGTGCCCACTGGTGTTTATCCGGTCCCAAATGTCACCACAGAACACAGGGGG------------------------CTGGAT-TTGGCAGCAGCA-----------------------------CTTG-------------TGCTTTTGTTGATTTTTACCCG--TGTATCAGAGTGGGGGATG---CTAGC----------CAATTTAGCT------------------------------------TCCCCTCCCCTTAACAGGGGGTCTCGCGGGGTGCCAATTGTCGCCTGCCTTCCCCCGCTTCCCCTTGTTAACTTATAGCATGATAGGTAGGTCACCTAACGTGGAAGCCT-GGTGGGTGATCCTTCCTCGGTA--------GGGAGCGCTTAGG-----GCTGTTGAGCTCAACAGCCCCACCTGGGTAAAATGTATGTTCTAA---AGAGTTACC----CAATT--ATAACAAAACTGTTGTAGGGTAACGAAGACCTGATGGAAGTGGT-----------ATTGTTGCC--GTTGAAAG-ACGGGTGTCCTGGCTCAAGTTCGCACTTCCTATACAGTGTTAAAGCCTTGTATCGGAAGTTTGGGCTTCGTCCCAGTGTACTCGATAATGTCGACTGCTGCGAAAGGTTTGGACCGTCTTCCAGTAGGTGTTGGGG
s NC_006146.genome 139970 1371 + 171096 ATTCTTCAAACAGCTAAATTTTAATTTGCCTAAGATAGCAATGTGAGATGTGGTTAATTGACCATTTTCCTGTCTGGCATAAATGCATGGGCGATCCTGGGTCCATGGCACATATGGAGATAAACATAGATGCC--GTCTGGCTCATGGGCAGGTGTGGGCAGGTGGGGGTGTTAGTGTGCAACCCTGTTTCTGGCTTCCAAATTGGGTAGGGGGTGCTATTTTCTCTATGGAATTAAAATGCTGACATTAGACAGTGGAGACCACACTATATGTGGGGATGTTTGTGGCTTGTCATTTCCTCTTTGAAGGTAATCCCCCAACTTAACTTCCCTTTAAATTATGATGCAAGCCTTGGGTTATTT-TAGGATAGTTATCTAGGCTTGATATTCGTGGGGGGAAACGGTGGATTTTGGTGTAGTTATTATTCACCG--TTTCATCCCCACGATTATTCGGTTTCAATTGCTCTTCTGGTTTCACGGGATAACTTTCCCCGAACACACCTTTCCCTTCATTGTCTGCAGTATCCCCCGTCATAACTTCCTCTTGATTTGTTCAGAGAGATCTCCAGGATGTCAGC-TCTGTGTTGGGGCCCGTTGGCAGGAAGAGGTTCCAGTCTTGTGTCCTATTTTGGGA--CTGGCT-------------GTGGGGGCTGGGTATTCACTAGTGCTGGCACCTAAGATAACTAGAATTGTTAGTTGTCTGCACTGGAGAGTATTCGGTTTCAGAAGTCATCACATAACACGGGAGGGCTTCTCCTCTCATCCTTTGCCCCCTGTTTGTTGGCAGCACCAGCGAAGCCCAGGAGGGGACCACGGCGCTCCTTGGTGCCTGTGGTGATGCTCTCTTTAATTTATGCCCTTCTCTACCATAGTGGGGGCTGGTTCTGGCTCCTGCTCCTCAATGTGCCCAAGGTGCAGGGGTTGCCGCTCTCGGATGCGTGGCCATGCCCACCCCCCTGCATGGGGGCGCTCTGTGTGCCAAATTTCGCGAGCTACCCCTTGTTTTCCCTCGTTATCTGATAGCATGACAGCTAGGTCACCCAAAGTGGAAGCCGAGGGAGGTGGCTCTTCCTTTTTAACATCTAGAGAACTGCCCATGTTCCTGCTG--GAGTTCCTGAGTGTTTACTGG---CAGTG-GTCCTCTGACATCGGGTTTCCGCTGTACTTGCATAATGAGAACTTTGTAGTGCGCCGGTGACCTGATAGCAGCGGTCTCACAAAGGCATCGTCGTCTTGTCAAACGTGCGGGTGCCCTGGCTCAAGTTCTCATTTCCAATACAGTTTGAGAACCTTGTATCGG-AGATAGGACTTGATACCAGTTTGCCCGATGCTTCCAGCAGCTGCG-GTGGTTGGTTCCCTCTTTATGTAGACACCGGGG

a score=0.0
s NC_007605.genome 146083 179 + 171823 GTCCCAAATCACGAGGTTAGGCAGGTGCACTTGGCTCTTTAGGAGGGACCCTTAAGCCAGACAATGTAGTGCCCCTTTTTTTTGCAAATTGGCCTTATTATTAATTTCTTGTTAACACTAATTCTGTTCTATGACCCTGTGTTTTTCAGATGCCGTTGAACGTGTCACTGAGCTGAATT

a score=9014.0
s NC_007605.genome 146262 397 + 171823 TGGACGCAGCTACTTGACCTTTGCCCCCGTGCCTCCAGCGCTGATAAGTGCTGCGTCCACTTTGTGTTACAGGTGGGCCAAACCTCCAGAATATCAATTGGTGGGGCCTTGGTGGGCTGCATAAGGCAGTAGGTTTGAGGTGACCTACTTGGACCATGTGGATCCAGTGTCCTGATCCTGGACCTTGACTATGAAACAATTCTAAAAAAATGCATCATAGTCCAGTGTCCAGGGACAGTGCACTCGGAAGTCTCATCATCTCCG--------------------------------------------------------TTTGT--------------------------------------GTGTTTAGTGTGGCCAGTAC----GGCCACCCCTGTGCCACGCCCTGGCATG------------------------CTGCTGACATCT---------GGCCGCCAATTTCAGCGGGC---CCTTTTCCCCCTTGTTCACCCCATAGCAAGAAGGGTAGGTTACATGGG
s NC_006146.genome 141681 505 + 171096 TGGGAGCAGCGCCTCACCCCTCAGCCCC----------CTCTGTTCCTTGGTGCATGCATTTCTTATCGGTGGTGGGAGCAGCCTCCGGAATGCCATTTTCGGGGGTCCTTTT----------AGGCAGCGGTTTTCAGGTGACCTATCTGGAGCA----GATCCCGTGTCTTGATCCTGGGCATGGGCTATGAAACAGTTCT-AACAATTGGATCATAG-CCAGTGTCCAGGGACGGTGCACCGGGAAGGCTCAGCGTCTCCAGGCTGTACACGGTTGATTGAATTTTTGCCCCTCTGTGCCCTCTGCACACCTCTGCTTTTGTGGGCCTCTAGTCTCACAGAGTCGGGGGACAACCGGGACGTGTCTTCCTTGGTCCGTGCCTAGGAGCGCCGCTGTTCCAGGACCCGGCATGGGTTTCTCTGTTAATTTGTCTTCAGCGCTGCCATCTATACCCCTCGAGTGCCAATTTTAGCGTGCCTTCCTTTCTCCTCTCGTTAACCTGATAGCATGAAGGGCAGGTTACACAGG

a score=0.0
s NC_007605.genome 146659 278 + 171823 TATTTTCCCATCAGCACCTGACTGGCCGGTGCAATTAGAGGAGAGGGCAACAACGCAAGGCTGTTGTTTTATTTGGGTTACAAGAGCTGCGGCGGTCGATGGGTTCACTGATTACGGTTTCCTAGATTGTACAGATGAACTAGAACTGTCACAATCTATGGGGTCGTAGACAGTGTGCTTACCAGACTTCCATGGAAGATGTGAATTTGCTGCTAGCTATATGGGTGGTGCTATGGGCTCCCTAGGGACTCATGTAGTGGGGCTTTGTGATAGCTAAT

a score=34658.0
s NC_007605.genome 146937 1692 + 171823 GAATGTGGCAGCTGTTGTTTGTACTGGACCCTGAATTGGAAACAGTAACTTGGATTCTGTAACACTTCA-TGGGTCCCGTAGTGACAACTATGCTGAATATCTTGAATATGGGAGGAGGGGGGCTTTGGGTTCCATTGTGTGCCCTTTCCTGGCCAACGTGAGGGTCCTAGTGTTATAGGGCGTGGCAGTTTTCTTGAGGGCTAATAACCCGGGTGAGGCGGTTGTCACAGGTGCTAGACCCTGGAGTTGAACCAGTACCA------CTCGGTTACAAAG-TCATGGTCTAGTAGTTGTGACCCTGCAAAGCTACGTGGGGATGAGCAGCCAGGGACTT-TGGTTGGCAAGCAGACAGGCGGCGCATTGGAACCCCAGAGGAGTGTCCCGGGGCCACCTCTTTGGTTCTGTACATATTTTGTTATTGTACATAACCATGGAGTTGGCTGTGGTGCACTCCATCTGGTAAGGGGGCTGGTGCGGACGCCTGTGTTTAGTCTATGCCAATGTTTACCTGCCTTGGGTTACTATTCCAAACGACCACACCTTTGAGGACACCTGGAGCCCTGATCATTCTCGGCTTTTACTGCCACCTGGCTTCT-GTTGGGTCAGACAGTTTGGTGCGCTAGTTGTGTGCTTAGCAGCAACGCACACCAGGCTGACTGCCTTAGCAGTGTGGCCCTTTATTGTGGCATCCTAAGGAGG--GATTCTGGAGT--------GCCTTTC--------GCGTGAAGCATGCCCTGA-------GACGTACTCG-----------------------AGTTAGGACTTAATCGCTCCTGTGCCGCTGGATGAG--------------------------------------GGAGCGCCAATT---TGTA--------------CATCCTAGCTC-TGGCCATAGAGTTAGCCCACCCTTGTGTCTCCCTTTGGCCTTTGCGGTGCCAATTTCC---GGTGGTTTCCCTTTTCCGCCCGTTTATCCAATAGCATGTAAGAGAGGTTGCCTAGATTTGGCAACTTTGAGGGAACGTTCCGTGTAGCTGGTGACCTAACACCCGCCCATCACCACCGGACAGATTCTGAACTTGTCCTGTGGTGT-TTGGTGTGGTTTTGGGGTACGCAGGAGTACGTTGGAATGCTTTGGAGCCGAGAGGGATGGGCCCGCTTGTGCGCTTATGTGTTACACGGTGCCAATAA------CCGGCCCGGTGCGGCTGCCCCGTGACCCGTGGGCCTTACCTTCCTGGCCATCGGGGGACCCTGGTGCTAGGGTCCCTT-------GTGTTGCTTTCTGC------CATAG--GGGGGAAAGCATCGCCTTC-AGAATTGGCTGCTCCGTTGGAACATTTGAGGCCTACTGTATCCGTGTCCTGACAACATTCCCCGCAAACATGACATGGGTTAATTTAAACATGTTTTGTTTGCTTGGGAATGCTCTTAGGGCCTGGAAGCTTGTCATTGG------------------ATTCATCGTTTCCTGAACTACAGGCGT----------------------------------AGGGCCTATTGTAGCAGGCATGTCTTCATTCCTGCGTACCGAATGGCATGAAG-GCACAGCCTGTTACCATTGGCACCTTTTTT----CCATGTAAACC---------TCCGTGATCCTG-----GGTCCTTTGGAGACTCAAG---TGTGAATTTGTTTTGGT------GTTCGGC-GCCAGGGTA---------TCTCGACGTTGGAATGTCAACTCAACTTGGGCACCTCGATAACCGGCTCGTGGCTCGTACAGACGATTGTTTGGCTCTGTAACTTGCCA-GGGACGGCTGACGATGTGTTTAGTCTGCCACTTGCATCCGGCGCTTTGGTTACTC
s NC_006146.genome 142313 1748 + 171096 GGATGATGTGGCTGCTGCTGGTGCTAGACCCTAAATTGGAAACAATAATAGTGATTCTGTGACAATTTAATGGGTCTAGTAGTTGCAGTCTGGCC-----CCTAACACTCGGAAATAAATGGGCTGATGTTTTCAGTATGTTCTCC----------------------------------ACAGGGCAG----------------------GTGTGAAGCGGCTGTCGCTGGCGCTACACCCGGGATTCGAAGCAGT--CATTGGGCCTCTGCTACGATTCTCCGGGTTTAGCAGTTGCGCTCCCGACTTGCAACTTTGAGATGAGGGGGTGCTGCTTTCTGGTTTCTAAGCAG----GCGGTGTGGTGGGGCTCCCGTGGAGTGACCCGGAGCCGCCTCCTTGGTTCTGTCCACATTTTGTTGCTGCACATAACCATGGAGGTGGTTGCGGTGCAGCCTA-----------GGCTAG-GCGGA-GCCTGCGTGCGGATTGGCCTGTTGATTCTCAGGTTGAGGTCCGCATGCC---CAATCCTGGCCTCAAGATGCCCCGAAGCCCATGGCGTGCTCGGCTATCGCAGCCACCTGCCCTCCGGCTGGGTCGGACGGTCTGGTGCGCTTGATGTGTTTTCGGTACCATCGCACATCAGGCTGAACGACTCAGAGGAGTGGCCCTTGAATG------CATGCGGGGGTTGATTCTCCGGTTCATGTTAGCATTCCCCACCCGGGCCTCAAGAATGCCCCGAAGCCCATGGCGTGCTTGGCTATTGCAGCCACCTGCCCTCCGGCTGGG--TCGGACGGTCTGGTG-CGCTTGATGTGTTTTTAGTACCATCGCACATCAGGCTGAACGACTCAGAGGAGTGGCCCTTGAATGCATGCCAGGGGGCTTCCGCCCTAGCCCTTGGCCGTGGGAGCAGCTCCC------GGTCCCCTCCG---CTTGC-GTGCCAATTTTCGCAGGCCGTTCTCCTTTCTCGCTCGTTTATCCAATAGCATGAAAGGCGGGTAGCCGAGCATTGTTA-------------GTTTCCTGGAGCCGGTGACCTGAGACCCACCCTTCTCGACGGGGCAGGTGTTATAAGTGTCCTGTAGAGTATGGGTGTGGTTTTAGTGCACGCGGGAGTACGTGGAAATGATCTTGAACCCGGTGAGCTCTG--------------------------GGTGCCAAGAAACCAGGCTGGCCCGGTGACGCTGGCCCGGA-------------ACTTCCCTGGCCACCCAGTGGACCCGG----AGAGTCTGTCTTGGAAGGCGTTGCTTTCAGCTGTTTATATGGTTGGAGGAAAGTATCGCCTTCTAGAATTGGCTTGTCCATTT---CTTCGTGAGCCTGCTGAGTCCGTGTCCTAAAACCAGTCCCAGCAGACAAAACATAGTATGGTCGA---GTGTTTTGTTTGCTTGGGACTGCAGTTAGGGCGCGTAAACTCGTCTCTCGGGGTGATGCCACGCGTCTGTGCCCCGGTTGCTGCTGTCCAGACGCCCCCCGGCCTTGCCGCGCCACCCGCTGTTTTTGGAGGGCCAGTTGAAGCAGGCATGTCTTCATTCCTGATTTCCTGATGGCATGAAACACATGGCCTGTTCCTATTGGCACCTTCACTCACGCCGCGTGGAGCATCAGGAAGCCCGTG-TCCTGGCACCGGTCCTTTGAGGTACGAAACATTGTGAGTTTGTTTCGTTTTCGAAGGTCGGCTGTCAGTGCATGTGGAGATTTTCGACGCTAGAATGCTAACCA-----GGGCTCCCCGGTCACCGGCTCACAGCTAGTACGGACGATTA-TTGGCTCTGTAACTTGTCGTGGGACGGGCATCGATGTGCTCGGCCTACCA----CGTTCGACACTCTCGCCGTTC

a score=0.0
s NC_007605.genome 148629 93 + 171823 GGGAGACTAATGGGGGGTGTGGTATGGCACAGGCTGGGGGTGAGTCTGGGGATGTCCCTGGGCGTTGCTGCAGCCCATTCGCCCTCTGGGGAT

a score=3854.0
s NC_007605.genome 148722 122 + 171823 GAGATGTTCAGGGGTGGCCGGTACCCTAC-GCTGCCGATTTACATAATATAAATTGTAAATGCT-GCAGTAGTAGGGATCTGGACGCGCGACCTGCTACTCTTCGGAAACGCCAACCCAGGAGC
s NC_006146.genome 144579 107 + 171096 GACACGCCAAGTGGTGTCCTGTAACTTACTACTGCCGCTTTACATAACGTAGCTTGTAAATGCGAGCAGTAGTAGGCGTCTGGACGCTAGACTTGTTCCTCTTCAAA-----------------

a score=5041.0
s NC_007605.genome 148844 211 + 171823 GTCGCCTCTGGCCCCATACTCCCGCCATGCGACTGCTCGCCCCCTCCCAGGCCTCCCTGGTGAGCCCTTGCCGCTCCCCGCATTCCTGCTTTCGGCGCCC----CTGCGGATCCCGATGACAGCAGGCCTTTCCTT----CCCCCGTTAATGAAAAGAATGACAGTGAGGTTGTGACAGAAGGACAGCTTTATT------CAGTTTACAGAGTGCCCTCGGAGGC
s NC_006146.genome 144891 222 + 171096 GCCGCTTAAGCCCCCGTGCTCTTTCCGACCGGGCCCCGGTGCCTTTCCATGGACCAATTGTG-GCCTCCGTGCCTCCCCTCCCGGCTGTTTCCGGCCCACGTTGCGGCGGG--CCAATTGCAGCGGCTCTCCCCCTTTTCCCCTTGTTAATAGATAGAATGACGTGGAGGTTACAACCCAGTGGCAGCTTTATTGTGAGACCATTTACAGAGTGCCCTTGGAGGC

a score=214734.0
s NC_007605.genome 149055 1689 + 171823 TACGATATTCCCGTTAAATGTCTTGTTGATTCTCTCAAAGGTGGGGAGGGAGGAGCTCTCCACAACAATGTTCCCTGGCAGCGTGAGCGCGCAGCCCTGCCGTTGGATGTATCTTCTCATGATGGTGCTGATAGAGGGGTCTCCGGCGTAGATGAAAAAGGCCTGGGCCATGCTCTGGCCGGTCACGATCGTTATGGGGTTGTTGGAAATGTTCCGGACCGTCAGCTTGAGGGTCTGGCCCGGCTTCCACTCCTGTGGGTAGACGTAGAAGACCGGGTTGGAGGAGTGGGACACGACAACGGCCGTAATCTTGGAGCTCAGGGGGGCCTCGTAGGTGTTGTTGTATTCCAGCTCCGTGATGAAATTAGGAGGAATAATCACAGGGGAGCCAAAGTAGCGGATGTCTGTGGATTCCCCGTCCCAGCGCCAGTGGCTCTTAGGGTAGGGGTTGTAACGGAAGGCAATAATCACATCATCCAATAGGGTCATGCCCACCTTGACGTTCAGCGGGCCCTCTCGT---TTCAGGTCC------GGCGTGTCCACGGAGACTCGGACGTAGCCCTTACCGCGGCGTATGGCGTTTACCGGACACACCTTCCCCGGGAATGTGTGAATACGGGCGTATGACTTTAGAAATGGGGGCGTGTGCTGCGCCAGCAGGTAAGGCAGGCACTCGTCCTGGCTGGTGACGGGAGAGCCACTGAGGAAGATCTGGGGCTCGCTGGTGTTTAGCTTGTCCCCGCTCTGGGTGCAGGAGCGTGTCAGCTGAATGTCGCTCTGCCCGGGCAGAATCTGCAGGTAGAGGTAGGGGTTCTTGACCAATCTGATGGGCACAATGTACCAGGTAAACTTCCCTTTCTCTATGAACAGGCTGCGCGGATTCAGGACGCTTAGCACGATGTCCTGGTCAGAGTGCATAACGAAGAAGGGCTTGAGGAATACCTCGTTGTCTTCCGCTCCAAAGAACAAAAACGCGACCGTAAAGTAGCGGCTGCCGTAGGTGGTCGTGTTGAAGGAGAAAGAAGGTAACTTGAAGCTGAGTATCTGGCCCACCGAGGGGCAGGGAGGCAGCTCTTGGCACTGCGCGTCCAGCTGCAATACCTGCTTGTTGGTGACGCGGACGTATGAGGGGAAGATCTCGTACTTCCACACGCCTCTCATGAACGACGTGTCTGG-----TTTTTCAGTGGGCCGCAGGCGGCGGAGGCTGTTCCTGAACGAC---------GAGCGCCGGGACGCTAGTGCTGCATGGGCTCCTCCGGGGTAAGCTTCGGCCATGGCCGGAGCTCGTCGACGGGCAAGGTGAGAGTCGGGGGGCGGGCGACGGTGCGGCCCCAATACA--------ACTCTCCGCTCGTTAGCTGGTAGAATATCCGCCCGGCGTCTAGGTTGTCACTTCGCTCGGCCGGCCAGAAGAGCGCAAGTCCAAGTCTGGTGCTGGGGCCGAT-GTGCAGCGGTTTGTGCCCGCAGTTGTAGACTGTCATTTTTATGGGCGAGT---GGGCGGTCCACACGCGCGGGCGCAGCACCCATTGGTCGCACGCCGCCTCCTGGAATGTAAACCCCCAGAGAGAGGGCGTGCCGCCCTGGAGATG-----GCCCTGTGCCATCACATGTAT------TTCCTCCTTGGGTGGAACAACGGCGTCGTGCTCCGGGTGGAGGGGGAATAGCGTCCAGGCATCTTTCAGGGTCACGAGACCGGGGTCC
s NC_006146.genome 145113 1689 + 171096 GACGATGTTCCCGTTAAAAGTCTTGTTGATTCTCTCGAAGGTGGGCAGGGAGGAGCTCTCCACCACAATGTTCCCGGGCAGCGTGAGCGCGCAGCCCTGGCGCTGGATGTATCTCCTCATGAGGGTGCCGAGGGATGGGTCCCCGGCGTAGATGAAGAAGGCCTGGGCCAGGCTCTGGCCGGTCACTATCTCTATGGGTTTGTTGGAGATGTTGCGGACGGTTAGCTTGAGGGGCTGGCCCGGCTTCCACTCCTGAGGGTAGACGTAGAAGACCGGGTTGGTGGGGTGGGACACGACCAGCGCCGTGATCTTGGAGCTGAGGGGGGCCTCGTAGGTGTTGTTGTATTCTAGCTCCGTGATGAAATTGGGAGGAATGATCACGGGGGAGCCAAAGTAGCGAATGTCTGTGGACTCTCCATCCCAGCGCCAGGTGCTCTTGGGGTAGGGGTTGTAGCGGAAGGCAATGATCACGTCGTCCAGGAGTGTCATGCCCACCTTGACGTTTAGAGGGCCCTCTCGT---TTCAGGTCC------GGCGTGTCCACGGAGACTCTGACGTAGCCCTTGCCGCGGCGGACGGCGTTGACCGGACACACCTTTCCCGGGAACGTGTGGATGCGCGCGTAGGACTTCAGGAACGGAGTCGTGTGCTGCGCCAGCAGGTAAGGCAGGCACTCGTCCTGGCTGGAGACGGGCGAGCCACTTAGGAAGATCTGGGGCTCGCTGGTGTTCAAATTGTCCCCGCTCTGGGAGCAGGAGCGCGTCAGCTTGATGTCGCTCTGGCCGGGCAGGATCTGGAGGTAGAGGTAGGGGTTCTTGACCAGTCTGATGGGCACTATGTACCAGGTGAGCCGCCCCTTCTCTATGAAGAGGCTTCGTGGGTTCAGCACGCTCAGGACGATGTCCTGGTCCGAGTGCATGACAAAGAAGGGCTTCAGGAAGACCTCGTTGTCCTCCGCCCCAAAGAACAGAAACGAGCACGTAAAGTAGCGGCTGCCGTAGGTGGTCGCGTTGAAGGAGAAGGAGGGGAACACAAAGCTGATTATCTGGCCCACCGAGGGGCAGGGGGGCAGCTCCTGGCACTGCGCGTCCAGCTGCAGCACCTGCTTGTTGGTGACCCGGACGTACGAGGCAAAGATCTCGTATTTCCACACCCCCCTCACGAAGCTCGTCTCTGG-----TTTTTCAGCGGGACGCAGGCGGCGGAGGCTGCTTCTGAATGAC---------GAGCGCCTGGACGCTAGTGCTGCATGGGCTCCTCCGGGGTAAGCGGCGGCCATGGCTGCAGTTCTTCCACGGGTAAGGTTAGAGTCGGTGGACGCGCGACGTGGCGGCCCCAGTGGA--------GCTCTCCGCTCGTTAGCTGGTAGAATATCCGTCCGGCGTCTAGACTGTCGCTCCTCTTGGCCGGCCAGAAGAGCGCGAAACCGAGCCTGACTCCCGGGCCTAC-GTGCAGTGGCTTGTCCCCGCAGTTGTAGATGGCCAATTTTATGGGCGAGT---GGGCGGTCCACACACGCGGGCGCAGCACCCATTGGTTGCAGGCGGCCTCCTGGAACGTAAACCCGGAGAGCGAAGGCGCCGCGCCCTGGAGCTG-----GCCCTGCGCCACTACTTGTAG------CTCCTCCCTGGGAGGGACGACAACGTCGCGCTCTGGGTGGAGGGGAAACAGCGTCCAGCCCCCGGCCAGGGTCACGAGGCCTGGGTCC
s NC_004367.genome 128932 1701 - 149696 TACCATGTTCCCGTTGCATGATTTGTTGATTCTTTCAAAGGTTGGTAAGCAGCCTATGACAGCCATAATATTTCCTGGAAGAGTTAGCACATGTTGATGCCGGTGAACTGCCCGTTTCATCATTGTGCTTAACCCTTCCCCGCTGTTGTAAATAAAAAATGCCTGTGCTAACGGCTGGCCGGTAATAATAGTGATGGGAAAGTTTGAGATGTTTCGCACCATGAGCTTAATTGTTTGGCCGGGCTTCCATTCCTGCGGATAAATGTAAAATACTTGGTTGTTAGGGTGGGACAAAATGAGCGCTGTGATCTTTGTGCTTAGAGGAGTTTCATAAGTGTTGTTATAGTCAACACTTGTTATGAAGTTTGGGGGGATGATCACGGGAGAACCAAAATATCGAATTTCAGTGCTCTCCCCATCCCATCTCCAGGTGCTTTTAGGGTAGGGATTGTACTTGAAAGCTAGGATCACGTCGTTGAGTAATGTCATTCC------AATTTTTATTGGCTCCTCTCGTGCCTTCGGTTTTTCTGTGGGCACATCCACTGAGACCCTGACACAGGTTTTGTCTAGTCTCAGGGCGTTTACTGGGCACACTTTTCCTGGGAATGTATGGATTCTGGCAAATGGTTTGCTGAATGGCCGCGTTCGTTGTGCCAGTAGAAATGGCAAAGATTCATCCTGCGTGCTCACCGGAACTCCACTTAGGAAAATTTGGGGCTCGTTCGTTGACAGCTTATCTCCCCATTGCGAGCATGATGTTTCCAAATTTATGTTGCCCTTGTTTGGAAATATCCTAAGGTAAAGGTATGGAGTTTTGACCAGTCTCAAGGGGACCATATACCAGATGAACTTTCCCTTATCAATGTATAAATTTCTGGGGTTGAGTACCTGCAGTTCCACTTCTTGTTCTGAATTAAGCACAAAAACAGGTTTCAGGTACACTTCATTTTCCGTGTCTCCGAAAATCACAAATGCGCAGGTGAAGTAACGGCTGCCGTAGGTCGCTGAGTTGAAGTTGAATGCTGGGAATTGATATCTTATGATCTGACCAACAGAAGGACACGGGGGGAGTTCTTGACATGTAGCATCGAGTTCCAGAACTTGTTTGTTTGTTATTTTGACATGAGATTTGTATAGTTCATATTTCCACATACCTCTTGTAAATGTTGTTTCAGGATGCTCTTCTCGGCGGCTAATA-----CGGAAGCTGTGTCGTAGGGACAAAGAGCGTGAGCGTTTG---GCTAGTGCTGCATGGGCAGATCCGGGGAAAGAGTCGCCCATGGTGACAGAGAGTCCACGGGAAGTTCCAGTGATATGGGTAACACAACGGCAGCACCCCAGTGGATACACCTTGATATCCTGTCG-----TAGTAAATGAGTCCCTCGG-----AGGTGTTTACTCCA-TCAGTCGGCCAAAAGATGGCAAAGCCCAGTCTGTCTCTGCGGTTGATGGTTAGGTAAGTAGTGCCCG-GGTTATATACTGTCA---TAAAGAGCGTCCCTGGGGCGTGCCACATGTTTGGGCGGAGCACCCACCGGTCGCAACAGGCATCCTGAAAAACAAAACC-----AGTATGGCCTTGCATTGGTGGGCCGTTAATGACCTGCCCAGCCGCTTTGATCACGGCCTCTTCTCCAGGGCTAATCATCGTGGTGGTATCCGGATATAATGGAACCAACGTCCAGTCTGTGCCTCTTGTCACCACGCCCATGTCC

a score=34481.0
s NC_007605.genome 150744 664 + 171823 ATGCTCAGAGAACAGCCCTCCCGGGCGGTGGGCGGCCCGGGCTCCAGCAGAACGTCGCAGACCCAGCCCTCCTCGGCCCTGTCCACCTGTATGTCCAGGTGCACGGACCCGGAGGCTGCGTCTCGTGACATGGCCAGGCCTGGTGCCAGCCGACCACGTCCCGTGTCCCAGCCGAGGCCGCGCCAGAGCAGAGCCCGGGACTGACTCAGGGCCACATCCCCTCGGCCCGCGGACGCCGCCTCGCCAGCCCCCGGGCCTTCATGGGCCCGCTTTCTACCTCTCTCCGGCACCCCAGCCTGGTCAGCCGCAGAGGAAGCATGACCTTGGGGTGGGACGGGGCAGGCGTGATCCTGGGCGCAATCTTTGCCGATCCCCACACCTTCACTCCTTGTTAGGTTGATAGAATGTCGGTACCACGCCACGGGGGGCGGGCCCGCATAGGGAAAAGCCAGGGAGAGCGATGTGGGCGAGGATGGGCTCAGGCGGCCCCAGACACGCAATTTGCCCCCCTGGGCGGCCGCAGCCTGCCCCTCGGCGGCCCGTGCCCCAGCTCCGTCACGGGGGGCGCATAGGAGGGGTATATCTAGGATAGCCGCACCTACACAAATGAGACACAGACACAGGTCGTGAGGATTTAGGCAACGCAGGCTTGTCTTTATAGTTA
s NC_006146.genome 146802 649 + 171096 ATGGTCAGAAAACAACCCTCCCGGGCGGTGGGCGGCCCCGGCCCCAACAGAACCTCGCAGGCCCAGCCCTCCTCTGCCCTGTCCACGTGCACGTCTAGGCGGACGACGCCAGAGGCCGAGTCACGCGACAGGTACAGGCCCGGTGCCAGCCGCCCTCGACCCGCGTCCCAGGCGAGGCCGCGCCAGCGTAGAGCCCGGGCCTGGCTCGGGGCCGCGTCACCCCGCCAGGGGGACGACGCCTCGCCGGTCTCGAGTTCCTCGCGCGTCCTCTTTCGCCCCCTCTCCGGCTCCCCCACCCGACCCGGGGGGAAAGTCGCCCGCCCTTGGGGCAGGAGGGG------------CTGGGCGCAATCTTCGCC---CCCCATCGCTTCCCTCCTCGTTAGTTTGATAGAATGACGGTACCACGCAATGGGCCAGGTCCCGGCGTAGGGAAAGGCCAGGGAGAGAGAAGTGGGCGAGCTGGGGCTCAGCGGGCCCCAGACGCGCAGGCCGCCATTCTCGGCCGCGGCAGTTGACCCGGCGGCGGCGCAGACCGGCGCCCCTTCGCCCGGTGCGCAGAGGAGGGGGAGATCTAGGACAGCGGCACCCACGCAAATTAGACACAGACACAGATCGTTGGGGTTGAGGCGACGCAGGCTAGTCTTTATGGTTA

a score=17975.0
s NC_007605.genome 151408 165 + 171823 CAAACATGGGAGCGTGCACCTGGAAGATGCAGCTGGGGTAGATCTTTACATCTTTACAGGGCGCA-GCGGCCGCCAGACACTGAAGGGCAGAGTTCACGGCGGGCACCTCCCAGAGGGAGCCCACCAGCCCGTACCTGGCCACGGCCAGGGCCTCGTAGGCCGAGA
s NC_006146.genome 147451 165 + 171096 CAAACATGGGAGCGTGCACCTGGAAGACGCAGCTGGGGTAGATCTTGACATCTTTGCGCGTGTCG-GCGGCCGCCAGACACGGGAGTCCCGAGTTCACGGCGGGCACCTCCCAGAGCGAGCCCACCAGCCCGTACCTGGCCACGGCCAGGGCCTCGTAGGCCGAGA
s NC_004367.genome 131273 165 - 149696 CAAACAGAGGAGCGTGGATGTCAAACGCGCATGATGGGATGATGCGTACATCTTTGCTAGGTTTATGCGGTAG-GATGCATTGTAAAGTTGATTTAATTTCTTCAGTGTCCCACAGAGATTTCACTAAGCCGTATCGTGCTACAGAGAGAGCTTCGTATACGGAAA

a score=11826.0
s NC_007605.genome 151573 182 + 171823 CGGGCAGCCGGAGCTTGTGGTACTGTCCCTCCGGCAGGTGGAGTGGGACACAGTTAGAGAACATTAGTCCTCTGGTCCCTATCTCCACCCGCCAGGCCTGTGTGTCAGTTTGCAGGGCCATCCTCGCACTCAGGTGGACTGGCTAGGCACCCTTCTGAAGTATCTGGCGGTGACTGTCACCT
s NC_006146.genome 147616 182 + 171096 CGGGCAGCCGGAGCTTGTGGTACTGCCCCTCCGGCAGGTCCAGCGGAAGGCAGTTAGAGAACGCCAGTCCCCTAGACCCTATTTCCACGCGCCAGGCGCTGAGGTCGGTCTGCAGGGCCATACTCGCGCTCAGGTGGACTGGGTGGACGTTCCTCTGAAGAATTTGGCGGTGACTGATACCT

a score=62697.0
s NC_007605.genome 151755 759 + 171823 GGTTCTTGAGAGAGTCCATAAAATGGCTGAAGCTCCAGGCGTATAGTATAATGAGCAACAGGGCCAAACAGGCGGCGGGGCCTGGGTAGTAGCGGGCAACGAGAGACTCTGTGCAATCAAACCCCAGGCTCCCGGCCTCACCCAGGAAGAGCAGCGGCAGGGACAGCATAAACCAGGAGAAGGCGCAAATGAGTCCGGTGAAGGTGACGTTGCATATCAGGCGCGGCTTCCTTCCGAATTTTGTGCGCAAAAGTTTCCAGATGATGATAACTGTGAGGAGGACGATCA--GGACTGCCGC-CAGTAGGTAGCAGCCGGCTTTCAGTCCTTGGACGGCCGTGTGCATGCCTTTGGTGGGGCCTTCCCTGCACATGTTGGGGCCTCTGTTGAGATTGGCGTCGGGGCCCATGGTAATGAGGA------GGATGATAATCAGCAGG--AGTACCAGACAAAACACGCCCATC------AGGTACAGGCACACATT------TCTGTGGGAGGTTCTCTTGGGCGTTCGGCTGAACAATGCTAGGGTCTTCTCCAACGCCATACCCAAGTGAGTCCATACGGAGCACATCAGGCCCAAGAACATCATGTTCTGGGTCAAAAGGCAGAGACCGGTAGACGAGAACTCCTGAATCATTTTTCCCAGCACCCAGAGCAGCAGTTCTATGAGAAGAGCTATCAGCCAGACATCCATTCGGTGAACCAATTTTCTTACAAAGATGATAAACAAGATGCCAGCCAGTGTTAGCAGAATCAGCAGGACGAGCA
s NC_006146.genome 147798 759 + 171096 TGTTCTTGAGGGAGTCCATAAAGTGGTTGAAGCTCCAGGCGTAGAGAAGGATGAGCAACAGGGCCAGGAAGGCGGCGGGGCCTGGGTAATAGCGGGCCGCGAGCGACTCTGTGCAAGCGAAGCCCAGGCTCCCGGCCTCTCCCAGGAAGAGCAGCGGCAGTGACAGCATGAACCAGGAGAAGGCGCAGATGAGGCCGGTGAAGGCGACGTTGCAGATCAGGCGCCACTTTCTTCCGAATTTTGTGTGCAGGAGTTTCCAGATGATGATGAGGGTGAGGATGACAATGA--GGATACCCGC-CAGGAGATAGCAGCCGGCCTTCATTCCCTGGATGGTCGTGTGCATGGCCCTCGTGGGGCCTTCCCTGCACATGTTGGGGCCTCTGTTGAGATCGGCGTTGGGGCCCATGATGATGAGGA------GGATGATGATGAGCAGG--AGCACCAGGGCAAAGACCCCGCCC------AGGTAGAGGTACACTGT------CCTGTTGGAGTGCCGCATGGGCTTCGTGCTGGTCAGGGCCCGGGTCTTCTCTACGGCCATGCCCACGTGCGTCCAGACGGAGCACATCAGGCCCAGGAACATCAGGTTCTGGGTCAGTATGCAGAGGCCGGTGGTTGAGAATTCCTGGATCATTTTCCCCAGCACCCAGAACAGGAGCTCCAGCAGGAGCGCGGAGAGCCAGACGTCCATTCTATGCGCAAACTTCCTAACCAGGGCGATGAACAGGAGGCCGACCACAGTTAGGAGAATGAGCAGAATCAACA
s NC_004367.genome 131628 744 - 149696 TGTTCTTCAAGTCATCTATAAACTGTCTGTGTGCCCAAATGTAAAGAAGCAGTAAGAGTAATATGAGAAGGGATCCAAAGGCGTGATAGTATCGAGTCATGAGCGATGATGGGCAAAAGAATCCAAGGTTGCCTGGCTCAGGGCGGAACACCAGGGGTGCGGCAAGTAACAGCCAACAGGTGGCTCCAATTATTCCGGTGAACATCACATTGCAGATTATGCGCATGCGCGTGGAAAGGCGCGTGTGCCAAATTTTGTATGTGATGTAGCACGTGGCTATAATTGTTGCTACACAACAGCACAGGAAAAAGAAGC---CCTTTGCTGCTTGACGAATGGCATGTCCAGCTTGTGTTGCCCCTTCTCGACACAGATTGGGGCCTCTATTTAGATT--------------------TGAGGAAATTCCGGCTTCAAACACACTAGCCAATACCAGTATAAACACGGTGATCAATGTTAGGAGCAGATACATAATGATGCATCTATTGCTCACCGGTTTGATGGTTTTGGCAGATACCATTAGAGCACGATGAGCTGCCATCCCACTGTGATGGAACCCAGAAAGCAATAAGCTCATTAACATCATGTGCTGGGTTAACATGCAGAGTCCGGTGTTTGAAAATTCTTGGATTAGCTTTCCTAGTAACCAGAGAAGAGTGTCCATAAACATTACAGCCAGCCACCAGTCTATGGAATCTTTCAGCTTTCTGATTAGCAACAGAAACAG---------------TAGCAGTATGATCAATATGAGTA

a score=22381.0
s NC_007605.genome 152514 668 + 171823 GCAGGCTTGTCATGCCGCTGAGGAAGGCGCTGTAGGATTTAGTGCACGCATCTTCCGTTGCATTGACGGAAGTCATGTTGGCCACCAGGGTCCCCACGGTGGACCCGGGGGCCATGGTGGAGAGCATCTTGCTGGTCAGAGCCAGACTGGGTGGTGTC------------TGCAGCAAAAGAGGAACTTGCCCAGGCAGTC----AGTTATTTTGCATGCCACC-TCCCTGCCTGGTGGACTTCCAGACTATTTTCTGCATTCGCCCTTGCGTGTCCATTGTTGCAAGGAGCGATTTGGAGAAAATAAACTGTGAGTTTCACAGATCCACGGGCCAC----GCTCCCCTG------------------GGGGCTT-----CATGATCCC-ACCGCCTTTCCCGATGATGATGACAACCGCGGCTGTCTGAAGCGGCTGACGAAATCGGTTGAGATTCTGATG----AGAGGCTTGGGGGGGTCTTTGCCCTCAAGGCGAGGCTCCTTCTCCTAGGAATGCCGAGCCCCCTGCACTAGCTTCGCT-CCACTG-------GGGATCTTTGCCAGCCTTCATACTAGATTCAGCGATCCCCCGGTTGGGAATCTTCGCCAGCCCCCCGTCCTGCTATCCCGCTCGTCGCCGCGCCTCCCATGCTAAGGGCCCC-CTTCCTTTCCCTTGACTTTGGGGATATTCGGAGTCTGCTCTC-GCCGCTCTCTTCT
s NC_006146.genome 148557 671 + 171096 GCAGGCTAGTCATGCCACTGAGGAAGGCGCTGTATGATCTGGTGCAGGCATCGTCCGTGGCATTGACGAAAGTCATGTTGGCCACCTGGGTCACCACGGTGGACCCCGGGGCCAGGGTGGAGAGCATGCTGCTGGCCACTGCCATGATGGGTGGTGGCCGGTTTGATGTGTGCTTGAAAAGAGGAACTTGCCTCTGCAGCCCAAGAGGCACTTTGCATGCCACCCTCCCTGTCTG-TGGACTTCCAGACCATTGTCTTCATTTGCCCTTGCGTGTACATGACTGCAAAGAGCAAAT-GGGGGGAATAGCCTGTGAGTTCCGCTTAATCGCCGGTTTCCATAGCGACCTTGCCAGAGTAGGGATGAGCCGGGGCGCAACAGCACGATCCCCGGTGCCTTTCCCGATGATGACACCCGCCGCGGCTGTCTGAGGCAGCTGAGGAAATTGGTTGAGATTCTGACGTGGGAAAGGCTTCGGTGG-TCTTGCCACGCAA----------CAATCCCTTGGGGTCTTG----CCCTCCACCAGCTTCCCCGCCACTTCTCGGCTGGAATCTTTGCCTCCCT--------------------ACCCCGCTAGGGGTTTTGGCC----------TCTGCCAGCT---TCCCCGCCCCTCCTCCTCGGCGGGAATCTTCGCATCCTTCCCCTTG---TGGGGGTGGCTCGG---CTGCTCTCCTTCCCGCTCTTCT

a score=1601216.0
s NC_007605.genome 153182 11505 + 171823 [encoded data, 11770 characters]
s NC_006146.genome 149228 11534 + 171096 [encoded data, 11770 characters]
s NC_004367.genome 134020 11503 - 149696 [encoded data, 11770 characters]

a score=62212.0
s NC_007605.genome 164687 1061 + 171823 TTTGCCCCCGATGTCGGCTGTCCTGCAGGCCAGCTCCGCGTACAGCTTCCTATCCTTCCTCAGGGAGGCCTTGATGAGCCGGCAGAGGACCAGGGCTGGCAAAGGCAGGTCTTTCTCATCCCGGGTGAACACCGCGTACATGGCCCTGAACATGAGGTAGCTGGACTCAGCCACCTTGTCGTCCGGCGGCGAGGGCGCGACCCACGCCTCGACCGGGGTCCTCACAAACACAGAATCTGTAGACTTGGCTGGCCTCATGGTCTCGTCAGGCCAGCTCACGGGCTTCAGGCTTATATGATAAAATGGGCGTGGCAGAATAGTATAAGACGCGAGGCCTGGGTGAGGAGAGTCCAGAGCAATGGCCAGGTTCATCGCTCAGCTCCTCCTGTTGGCCTCCTGTGTGGCCGCCGGCCAGGCTGTCACCGCTTTCTTGGGTGAGCGAGTCACCCTGACCTCCTACTGGAGGAGGGTGAGCCTCGGTCCAGAGATTGAGGTCAGCTGGTTTAAACTGGGCCCAGGAGAGGAGCAGGTGCTTATTGGGCGCATGCACCACGATGTCATCTTTATAGAGTGGCCTTTCAGGGGCTTCTTTGATATCCACAGAAGTGCCAACACCTTCTTTTTAGTAGTCACCGCTGCCAACATCTCCCATGACGGCAACTACCTGTGCCGCATGAAACTGGGCGAGACCGAGGTCACCAAGCAGGAACACCTGAGCGTGGTGAAGCCTCTAACGCTGTCTGTCCACTCCGAAAGGTCTCAGTTCCCAGACTTCTCTGTCCTTACTGTGACATGCACCGTGAATGCATTTCCCCATCCCCACGTCCAGTGGCTCATGCCCGAGGGCGTGGAGCCCGCACCAACTGCGGCAAATGGCGGTGTTATGAAGGAAAAGGATGGGAGCCTCTCTGTTGCTGTTGACCTGTCACTTCCCAAGCCCTGGCACCTGCCAGTGACCTGCGTTGGGAAAAATGACAAGGAGGAAGCCCACGGGGTTTATGTTTCTGGATACTTGTCGCAATAAACGCACTTGCCTA----TTTCACCTTGTTTTAGTGTGGCAT
s NC_006146.genome 160762 1064 + 171096 CTTGCCCCCGAGGTCGGCCGCCTGGCATGCCAGCTCCGCGTACATTCTCCTGTGCTTCCTCAGGGAGGCCTTCAGGAGCCGGCACATGACCAGGGCCGGTAGAGGCAGGTCCGTCTCGTCCTGGGTGAACACAGCGTATAGGGCCCTGAACAGGAGGTAGCTGGTCTCTGCCACTTTGTCGTCCGGGGGCGAGGGTGAGACCCACGCCTCGACCGGGGTCCTCACAAACACCGAATCGGTAGACTTGGCTGGCTGCATGGTTCCGTCTGGCCAGCTCACCTGCCCCGGGTTT-TATGTTAAAATGGGCGTGGCAAAACCGTATATAGCGCGTGGCCTGCGTGAGGTAAGTAGGTCGCCATGGCCAGGCTTTTCGCTCAGCTGCTCCTGCTCGCGGGCTCCGTCGCCTCCTGCCTGGCCGTCACCGCCTTTGTGGGTGAGCGGGCCGTCCTGAGTTCCTACTGGAAGAGGGTGAGCCTAGGGCCCGAGATCATGGTGGAATGGTTCAAACTGGGCCCTGGAGAGGAGCAGACGCTCATTGGGCGCATGCACCAGGATGTTATCCTGATCGAGGGGCCCTTCAGGGGCTTCTTTGATATGTACAGGAGCGCCAACACCTTCTTCCTCATCCTGACCACGGCCAACATCTCCCACGACGGCAGCTACCTGTGCCGCATGCGCCTGGGGGAGACCGAGGTCACGAAGCAGGAGCTGCTTAGCGTGGTGAAGCCCCTGACCCTGTCTGTTCAGGCCAAGAGGTCTGTATTCCCAGACTTCTCCACCCTCAACGTGAGGTGCAAGGTCAACGCGTACCCGCGACCGTATGTCCAGTGGCTGATGCCAGAGGGCGCGGACCCCGCGCCCACCGTGACACAGGGTGAAGCTATGAAGGAGGGGGATGGCAGCCTCTCTGTTGTGGTGTACCTGCACCTCCACAAACCCTGGCAGCTGCCTGTGACCTGCGTTGGTAAAAATGAAAAGGAGGAGGTCCAGGGTGTTTATGTTTCTGGTTATGTGTTATAATAAATGCAACTAACTGAGCTGGTGGCCTTAGTTTGCTGTGGGCT

a score=46696.0
s NC_007605.genome 165748 1786 + 171823 TGGGGGGGTGGCATTGCGGGTGGATAGCCTCGCGACTCGTGGGAAAATGG-------GCGGAAGGGCACCGTGGGAAAATAGTTCCAGGTGACAGCAGCAGTGTGTGAAGATTGTCACAGCTGCTG-----------GTTTGGAGAAAACGGGGGTGGGCGGTGATCA------GGGAGAACAATTCCCCG-----GGGACACCTGCACGAGACCCCTGGGCTCTCAGG-----AACTCCGCCC---AGGTCTTGCCAATTGGGGTGATCCTGTAGCGCCGCGGTTTCAGCATCACAGGTTATTTTGCCTGAAGCTTGCTGGGGCGTAAATCCCTCTCGCCTTGTTTCTCAGAGAGCATTTCAGGCCGGTTTTGCAGTCGCTGCTGCAGCTATGGGGTCCCTAGAAATGGTGCCAATGGGCGCGG--GTCCCCCTAGCCCCGGCGGG----GATCCGGATGGGTACGATGGCGGAAACAACTCCCAATATCCATCTGCTTCTGGCTCTTCTGGGAACACCCCCA--CCCCA----CCGAACGATGAGGAACGTGAATCTAATGAAGAGCCCCCACCGCCTTATGAGGACCCATATTGGGGCAATGGCGACCGTCACTCGGACTATCAACCACTAGGAACCCAAGATCAAAGTC---TGTACTTGGGATTGCAACACGACGGGAATGACGG---GCTCCCTCCCCCTCCCTACTCTCCACGGGATGACTCATCTCAACACATATACGAAGAAGCGGGCAGAGGAAGGTAAGAGTGCCATCTATCTGTACTTTTATTTATTGCAT---CACAAGTCACATCAATAATAAGGGCGCCATCTAGCGGGAGATGTTATCCACACCATCCCAATTCACATCTCAGGGACAACAGGTCAAAGTTCTTTGTTGACACCCCCAGCGCTGGCTCCAGGGGGTGGAAGCGTTGGATGCAGTCCTCCGCATCGGGGCGGACGCCTCCTCCCAACGCGTTTCTGCGGATCAGTCGCTGGCTGGTGGGCATCGGAGTCGGTGGGCGGTCCTCCACGGGGACACGCTCCTTCTTGGCCTTGTTCTTTGACCTTTTGGACATTCTTCTGAAGGAACGGCGGAGAGTAGCGTAGAATCCAGCCAGTGGTCTACCCGGTCGCATGGTGGCTTCTTAGATGAGGAGCAGGCATAAAAGTCCAAACAGGACACAGAGTACCACCAGGAGTAGTCTTAGTCTGCTGACGTCTGGGTCCTCGGGGCAGGGGTGGCTAGGCCTGGTCTCCGTAGAAGAGCCGGGCAGGCCGCAGGCAGAGGACTGCTGCTCTAGCAAAGCACGCTCCAGGACGTGTACCATCTCGAGAGTGAGGCACAG-CTGTTTTCGTGGACTTTTATACAGTAAGGACAAGGAAAGAAGGCCAGAGGAATGTGGAAAGATGAGCGAGGACAGGTGTGGAGGTTTTGGGCTAGCTCTTAGTT----TCTGGGTGTGAGAGAGGGATTAAAGTGCTTATGCGCAAAGAATGTGTCAACAACAGGTGTTCCTGCCTCTGCTGGCATGAGTTAGGTGT----GGCTTGGGC--------------TGAATCCAAATGTG-----TATTGGCACAAGATGGAAAGCAAAGTTGCTGGAGTTACTGGGTGGGAGACAGGGATGTATGTGGTCCCCCGCTGGTAT-GCCAGTACCCTGTGGAAGTAAGGGGCCTCATCTGCCTGGTAG--------------TTGTGTTGTGCAGAGGTCTGATGTGTGTAGGAGGGGTGGGTTCAACGCAGGGGCGTTGG---TGGCGGAGTCTGGCAACGCCCGGGTCCTTGCTACCTGTGTGGTGTGTTAAGGGCTGGGTAAAGGTGTCTGCCAATTCTCGCATGTCCTCCTTT
s NC_006146.genome 162146 1808 + 171096 TGGGAGACCGGCTCCACGG-TGGATAGGCACCC------TGGGAGACCGGCTCCACGGTGGAGTGGCACTGTGGGAAACCGGTTCCA-----CCGCGGGGGTGGGTGAATGTCG-CGTGGCGGAAGTCTTTTTCCGCGGTTGGGAAAGTGTGCACTGGGGGGCCGTCCCACGGTGGGAGATTTAATTCCCGTAATTGGGGC----TCACGAGACCCGTGTGATTTTGGGGTGCAAACTCCGCCCCACAGGTGGCTCAGATTGGTGCGATCCTGGACAGCTGCGGTTTTAACATCACAAGCCTGTTTTCCTGGGGCTCGCTGGGGCGTAAATCCCTCCTACCTCGTTTCTCAGAGAGCATTTCTGCCTGGTGCTGCAGCCCGGGCTGCAGCTATGAGCGCCTTGGAGATGGAGCCCCTTGGCGCGCCCGCGCCCGGGACCCCGGTGGGCCAGGAT---GGTGGGGAAGGTAGCGGGAGAGAAAGC---TATCCATCTGTTTTCAGCTCGCCCCCGAGCTCTCCTGGTCCCCAGGGTCCGGACTATGAAGACCCTCCTCCAGACGATGGGAATCCACCTCCTTACGACGCGGAAGACGGGGGGGACGGTGGTC---------CCTATCAGCCTCTGCGTGGTCAAGACCCTAATCAGCTGTATGCAAGACTCGGAGGCGGTGGGGGTAACGGCACGCTCCCTCCCCCTCCCTACTCTCCACAGAGGGAAACATCTCTGCATCTCTACGAGGAAATACATCCGCAAAGGTAAGTTTGCCATCTAGCGATGCTTTTTATTAACACACACACTCAAGTTACATAATTGTCTATGCCGCCACCTAGCGG----CCTCAGTCATACCACCCCAGTTCACATCTCAATGACAACAAGTCCAAGTTTTTGCCAGACACCCCCAGGGCCGGGTCCAGCGGGTGCCAGCGATAGATGCAGTCCTCGCAGTCCTGCCGCGCGCCTCCTCCCAACGCGTTTCTGCGTCTCAGGTGCTGGGACGTTGGCATCGGAGTTGGCGGGCGCCCCTTTCCCGGGTCCCCCTTCTCCTCGGCCTCCTCTTTGGGCCTTTTGGACATTCTTCTGAGGGAACGGCGAAGACGAGAGCAGAGGTCCGACAGGTGTCTACCGGGCGCCATGG-AGTCTCTTAGATTAGTAGCAGGCAGACGAGACCAAACAGGGCGCAGAGCACGACCAGGCAGATTCTCAGGTTCTTGAGCTCTTCTTTGACCGGGCA---GTGGCTTGGCTTCTGCCCCTCAGAGGAGCCGGGCAGGCCGTAGGCAGGGTAGCGCTGCTCCAGGAACCCCGGGTTCAGAAAGAAGACCATCTCGGGAGTGAGGAGCAGACTGGCTCCTCGGGTTTATATACAACCAGAACAAGGAAAGAAGGCCAGAGGAATGTGGAAAGATGAGCAAGGA------GGCAGGTATCGGGTTAGCGATGGGTCAGAAAATAGGTGTG-GGGTGGAAACAAAGTGCCAAAGTGTCAAG-GTGATTGCTCACTCGGGGTGCCCGGTCTTGCAGGTTCTGAGTGGGTGTTCTGGGCCTAGTCACGGTTTCTGGCAGTGGATGCATATGTTTTGCCTAGTGGCATTAGTTGT--------GTTGC--AATTTGTTTTTTGGGAGAAGGGCGTGGGGGAAGT----CACTGGCATGGGCAATGCCCAGTTGAGG----------CCTCTCCCCGGAAGGCGTGGGGCAGGATTTTTGTTGGGAATGGGACGGGGATATGGAGGAGGAAGTAGTT--GTGCAGGCGCGTGGGCCTTGGTGGGGCCACATCTCGCATGCCTTCCT-TTAGTTGTGTAAGGTGTGTGGGCCTTAGTGGG-------GCCAATTCTAGCAGGCCATCCTCT

a score=3114.0
s NC_007605.genome 167534 258 + 171823 CCCCTTGTTTTGAAATAGAATATGAATGTGGCTTTTCAGCCTAGACAGACAGTGTGGCTAAG--GGAGTGTGTGCCAGTTAAGGTGATTAGCTAAGGCATTCCCAGTAAATGGAGGGAGAGTCAGTCA-GGCAAGCCTATGACATGGTAATGCCTAGAAGTAAA-------GAAAGG-----TTAGTCATAGTAGCTTAGCTGAACTGGGCCGTGGGGGTCGTCATCATCTCCACCGGAACCAGAAGAACCCAAAAGCAGCGTAGGAAGGTGT
s NC_006146.genome 164125 241 + 171096 CCCCCTGTTATCTGATAGAATGTGAGTAAGGCCTGTCAAAATGCAC---CAGAGTTGCCTAATAGGAGCTTGGGTCAGATAAGGTGAATAGCTAA-ACAATCCCGG-GGGTGAAGGGAGGGGCATCAATGGTTACCGTCAGCCGTCCTGATTCCGAGAAGGAAAAGTTCACGAGTGGCCACCTCAGTCATAGTAGCTGATCTGGATTGGATCTGCCGGATCACCCGGGTCACCTTCCGGACC---------------------------TTGT

a score=0.0
s NC_007605.genome 167792 141 + 171823 GGATCACCGCCGCCATGGCCGGAATCATGACTATGACCGCCGCCTCCGTCTGTCATCAAAGGCGGGCCCTGGTCACCTCCTTTGTTTTCAACCTCTTCCGTCAATTGTGGAGGGCCTCCATCATTTCCAGCAGAGTCGCTA

a score=5052.0
s NC_007605.genome 167933 197 + 171823 GGGCTATGA---GGCAGCGGGTCATGTGGGCCATTGTCATCAGTGTTGTCAGGGTCCTGTGGGCCATTGTCATCAGTGTTGTCAGGGTCCTGAGGCAGCGGGTCATGTGGGCCATTGTCATCAGTGTTGTCAGGGTCCTGTGGGCCATTGTCATCAGTGTTGTCAGGGTCCTGTGGGC---CATTGTCAGGACCACCTCCAGG
s NC_006146.genome 164366 200 + 171096 GGGCCTTGATTGGATGGAGGACTATCCGGGCCATTGTTACCACCATCAGTGGGGCCTGGTGGGCCACCTCCCTCGTTGCTTTCAGGCTGCTGATTATGAGGTCCGCCGGGGCCACTGCCGTTGCTGTTGTCGGGGTTTTGTGGCCCGTTGCCCCC---GTTACCACGGTCATTTAGGTGAACACTGTTGCCGCCGCCGCCAAG

a score=0.0
s NC_007605.genome 168130 170 + 171823 TGCGCCTAGGTTTTGAGAGCAGAGTGGGGGTCCGTCGCCGGCTCCACTCACGAGCAGGTGGTGTCTGCCCTCGTTGGAGTTAGAGTCAGATTCATGGCCAGAATCATCGGTAGCTTGTTGAGGGTGCGGGAGGGAGTCATCGTGGTGGTGTTCATCACTGTGTCGTTGTC

a score=25056.0
s NC_007605.genome 168300 3402 + 171823 CATGGTAATACATCCAGATTAAAATCGCCAGAAACAGGAGGAGCCAAAGGAGATCAACCAATAGAGTCCACCAGTTTTGTTGTAGATAGAGAGCAATAATGAGCAGGATGAGGTCTAGGAAGAAGGCTAGGAAGAAGGCCAAAAGCTGCCAGATGGTGGCACCAAGTCGCCAGAGCATCTCCAATAAGTAGATCCAGATACCTAAGACTGCGTTGAAAAAAGAGTGTTAGGGTTGGAAAAGTGGGGG----TGTGG--TAAATAATTCC------TAGGGAATGTTAGATCTTACCAAGTAAGCACCCGAAGATGAACAGCACAATTCCAAGGAACAATGCCTGTCCGTGCAAATTCCAGAGAGCGATGAGCAGGAGGGTGACTGGGGAAAGAGGAGAAAGTGCGTTAGAGAAGG----AAGAGTAAGGGAAAGGGGGTGTGG---GGCAAAGGGTGTAA-TACTTACTCATCAGTAGGAGTATACAAAGGGCTCCAAGTGGACAGAGAAGGTCTCTTCTGAAGATAAAGATGATCAAAATTATAATTATAAGCATGAGAGCAAAGGAATAGAGGACAAGGAGGGCTCCTCCAGTCCAGTCACTCATAACGATGTACAGCCAAAACAGTAGCGCCAAGAGGAGGAGAAGGAGAGCAAGGCCTAGGGAAGAGGAGAGGGGGGGTCCTCGAGGGGGCCGTCGCGGGCCCGGTGGGCCCCTCTCAAGGTCGTGTTCCATCCTCAGGGC----AGTGTGTC-------------AGGAGCAAGGCAG--------TTGAGGAAAGAAGGGGGCAGAGCAGTGTGAGA-----GGCTTATGTAGGGCGGCTACGTCAGAGTAACGCGTGTTTCTTGGGAT-----GTAGGCCCGGGGGGATTTGCGGGGTCTGCCGGAGGCAGTACGGGTACAGATTTCCCGAA-----------------AGCGGCGGTGTGTGTGTGCATGTAAGCGTAGAAAGGGGAAGTAGAAAGCGTGTGTTTGTGTTAGAAAAGCGGGTCCCCGGGGGGC-----AAGCTGTGGGAAT--------GCGGTGGCCAAGTGCAACAGGAAATG---GAAAGGCAGTGCGGCAAT----CAGAAGGGGGAGTGCGTAGTGTTGTGGGAAGC-GGCAGTGTAA------------TCTGCACAAAGAGGCGCGG------GGCGCGCAACGTTGGGAGGTCGTTGGCGGCAGGCGGGAGGCCGTGCTTTAGGGGGGTTCAGGTGAGGCAAGGCTGTGGGGTAACCGTAGGGGAGGCGGGTG-----AGGCGGCTAAGAGGGCTAAGGGTCGGCGGGTGA------CGAAGCAGCAGACGGCGGATATGGGAATTTCAGAATGA--GGTGGCGGATTC-------AGGCGAAAAGGGTGTGGGCTGTGCGAGTGTCATGAGGCAGGCGCGGAAAGTCGCTGCGGCTTGCTGGGGCATGGGGGGCCGCGCATTCCTGGAAAAAGTGGAGGGGGCGTGGCCTTCCCCCGCGGCCCCCCAGCCCCCCCGCACAGAGCGGCGCTACGGCGGGCGGGCGGCGGG--------GGGTCGGGGTCCGCGGGCTCCGGGGGCTGCG-----GGCGGTGGATGGCGGCGGACGTTCCGGGGA---TCGGGGGGGTCGGGGGGCGCCGCGCGGGCGCAGCCATGCGTGA---------------CCGTGATGAGGGGGCAGGGTCGCAGGGGGTGTGTCTGGTG-----GGGGCGGGAGCGGGGGGCGGCGCGGGAGCCTGCACGCCGTTGGAGGGTAGAATGACAGGGGGCGGGGACAGAG--------------AGGCGGTC----GCGCCCCCGGCCGCGCCAGCCAAGCCCCCAAGGGGGGCGGGGAGCG-GGCAAT--GGAGCGTGACGAAGGGCCCCAGGGCTGACCCCGGCAAACGTG--------ACCCGGGGCTCCGGGGTGACCCAGCCAAGCGTGACCAAGGGGCCCGTGGGTGACACAGGCAACCCTGACAAAGGCCCCCCAGGAAAGACCCCCGGGGGGCATCGGGGGGTGGGGCATGG---GGGGCCGCGCATTCCTGGAAAAAGT-----GGAGGGGGCGTGGCCTTCCCCCGCGGCCCCCCAGCCCCCCCGCACAGAGCGGCGCTACGGCGGGCGGGCGGCGGGG--GGTCGGGGTCCGC--GGGCTCCGGGGGCTGCGGGCGGTGGATGGCGGCGGACGTTCCGGGGATCGGGGGGGTCGGGGGGCGCCGCGCGGGCGCAGCCATGCGTGACCGTGATGAGGGGGCAGGGTCGCAGGGGGTGTGTCTGGTGGGGGCGGGAGCGGGGGGC-GGCGCGGGAGCCTGCACGCCG--------TTGGAGGGTAGAATGACAGGGGGCGGGGACAGAGAGGCGGT---CGCGCCCCCGGCCGCGCCAGCCAAGCCCCCAAGGGGGGCGGGGA-------GCGGGCAATGGAGCGTGACGAAGGGCCCCAGGGCTGACCCC-----------GGCAAACGTGA------CCCGGGGCTCCGGGGTGACCCAGCCAAGCGTGACC--AAGGGGC-CCGTGGGTGACACAGGCAACCCTGACAAAGGCCCCC-----CAGGAAAGACCCCCGTGGGGCATGGGGGGCCGCGCATTCCTGGAAAAAGTGGAGGGGGCGTGGCCTTCCCCCGCGGCCCCCC-AGCCCCCCCGCACAGAGCGGCGCTA----CGGCGGGCGGGCGGCGGGGGGTCGGGGTCCGCGGGCTC---CGGGGGCTGCGGGCGGTGGATGGCGGCGGACGTTCCGGGGATCGG--GGGGGTCGGGGGGCGCCGCG-CGGGCGCAGCCATGCGTGAC--------------------------CGTGATGA-----------GGGGGCA-----GGGTCGCAGGGGGTGTGTCTGGTGGGGGCGGGAGCGGGGGGCGGCGCGGGAGCCTGCACGCCGTTGGAGGGTAGAATGACAGGGGGCGGGGA--CAGAGAGGCGGT-CGCG-----CCCCCGGCCGCGCCAGC--CAAGCCCC-------CAAGGGGGGCGGGGAGCGGGCAATGGAGCGTGACGAAGGGCCCCAGGGCTGACCCCGGCAAACGTGACC--CGGGGC--TCCGGGGTGAC-----------------------CCAGCCAAGCGTGACCAAGGGG---CCCGTGGGTGACACAGGCAACCCTGACAAAGGCC----------CCCCAGGAAAGACCCCCGGGGGGCAT----CGGGG----GGTGGGGCATGGGGGGCCGCGCATTCCTGGAAAAAGTGGAGGGGGCGTGGCCTTCCCCCGCGGCCCCCCAGCCCCCCCGCACAGAGCGGCGCTACGGCGGGCGGGCGGCGGGGGGTCGGGGTCCGCGGG---------CTCCGGGGGCTGCGGGCGGTGGATGGCGGCGGACGTTCCGGGGATCGGGGGGGTCGGGGGGCGCCGCGCGGGCGCAGCCATGCGTGACC---GTGATGAGGGGGCAGGGTCGCAGGGG-------GTGTGTCTGGTGGGGGCGGGAGCGGGGGGCGGCGCGGGAGCCTGCACG----------CCGTTGGAGGGTAGAATGACAGGGGGCGGGGACAGAGAGGCG-GTCGCGCCCCC-GGCCGCGCCAGCCAAGCCCCCAAGGGGGGCGGGGAGCGGGCAATGGAGCGTGACGAAGGGCCCCAGGGCTGACCCCGGCAAACGTGACCC-----GGGGCTCCGGGG-------------------TGACCCAGCCAAGCGTGACCAAG
s NC_006146.genome 165516 3551 + 171096 CATGGACGTAAATCCAAATGAGGATGGCCAAGAATAGCAGAAGCCAATAGAGATCGACCAGGACCGTAAACCAGGCCAGGTGCAGCAGGACAGCGATAATCAGGAAGACTATGGCCAGTAGGAAGGCCAGGCAGAAGGCCAGGATTGTCCAGAAGGAGGCACCGTATTCTCGGAGCAGCCACATGAGGTAGAACCAGACAGCGAGCGCTGCA--GAAATGAGAG-GACAGGGTTAGATTGGAGGAGATTCCTGTGGCCCAAGTGGTCATCGGCGGTGGGAAATG-CAGAGCTTACCTAAGAGAATGCAGAGGCAGAGGATCACGAGTCCCACGAAGAGGGTCTGTCCAGTGAGCGTCAGGAGGTTGGACACCAGGATCACAACTGCAGAGAAGAGAGAGCGGGGGTCAGGGAGGGGGATGGGAATATGGGTAGGTGGTTGCAGGAAGGGAAGGGGGGTGCTTACTCACTCATAATTAAGATGATGCACAAGAGTCCCAGGGGGCACAGCAGCCGTCTCTTGAATAACATGATGATGATGATGATGATGATCAGGACCACTGCAAAGGAGCTGAGGACTGTGCTGGCAGTCTGAGTTAGGTCAGACATGATGATAAAAAACCAGACCAGAATTGCCACGAGGAGGAGCAGGGATCCAAAGAGTAGGGATGCATGCGGTTGTGGGCATCGGGGGTG-----------CCTGTGGCCCCCGCCCCTGCCCCTATTCC--CCTCCATGCTGCTGGTGTGCTGCTGGTGTGCTGGAGGAGCCTGACAGTCTCAGAATCTAGGCAGGGAGGAGACGGAG-GGGGAGGGACTCTGGGCTGTTTGAATGCACCAATGGGAGAGCCGTGCGTG------GGGATTGCAGGTGGTCTCGGGGGGA--------GTCT------GATAGTGCAAAAACAGGCTGGCAGAGACTGAGAATGAGTGTTTAGGGGCGGTGACTGGGGACATTTA-----AAAAAGGGGAAGTTGAAAGCACGGGTCTAGGCTCAGAGAGCGGAT-----GGGGGTGTGTAGATTCGCGGGAATTCGCAGCCGCTGTGGGAAAGTAGAATAGGCGGAGCGTGAAGAACAACCTGTGAATTCTGCAGCATGTGAACCGCG----ATTATAGGAAATGGGCGGTGTAGGCACGAGAGAATTCTCAGGGAAGTAGCGTGGTAGCTAGAATCGCAGCG------------TGGTGCCAGTCGGGCGGCTGTGCC----------------------AAGCGGCAGGGTCCTTGGCAGGTTGGTAGGGGTCTTCAGGCAGCCGAAAGTGTTA--TGCAGATGTGTGCACTGCTCAGAGAGGCTGACAGCGGATATGGTAGTCTCAGAATGAGTGGCCGCGGACGCCAGAGCGAGCCGGGAAGGGGGAGCGGTGTG-GCCTGGCAGGGGGGAGACGGGGCAATGGGAGG---------GGGGTGTGAGGGGTTGAGCC----------------AATGGGCATGGGTTTCGGACGGGACC-------------------AGCAGTGGCGAGGGGACCAGGAGGGGAGTTTGAAAAGGGCAATGGT--GTTGTTTTCCGTGCCTGTGCTTTTGTCGGGGACATTGGGGGGATGTTCTTAGGAAGCCCGGCGGGAGGGGGGAGCGGAGGGCGAGGAGGAGCGTGAGTGAAAAACAGAGGATGAGCTGTG-TGAAGCGGTGTGCAGCCAGGGGGAGTG-CTGCTGCATGAGGAGGGGAAATAGAGGACGGGGCAGTGG-CTGGGCGCGGTTGAAGGTGCACGT----GGTGGCTGGGGCAAAGCAGGAGTGTCCCAAAAGTGGTCCAGGGCGACCCC--CCTTACCCGCC-GGCTCCAAAAAAGTGAGGGGGGCGTGGCCATCCCCCGCGTGCCCCCCCCCCCCCCCCCCCCCCGCGTAGAAAGTGGGCACTGTGCCAGGGCCTTCGGGACGGGAGGCCGGCGCGCGCCCGGGGTCCCGGGGGGCGGCGC--GCGGCCTT----------CCCCCGTCTGCTCCCGCGGCCAGTCCCTGGATGTCGGGGAGGGCCCGGGGCCGCGCG----TGGGGATGGCCGGCGGGAGGGGCCGGCGCCTGCAGGGGGGGCCGGCGGGGCGTCCCGT----CGTCACGCTCGGCTGCACGCGCGGCGGCGCCGGCCGGGGGCTGAGGGGGCTCCCGAGGGCGGGGCCGGGGCCTGGCGGGGGCCAGCGCGGGGTCCCGGGG---CGGGGGGT------CGGGCG--GGCATGCTCCGGGGTAACGAGAGGAGAGAG-----GAGGGTGTGCCTGGCGGGGGAGAGGGGGCAGGGCTGGCGCCGGGCCGCGCCCCCGGCCCCTCTCCTGGGAGGCCACGTGTGGAGGCCCG----CGGAGAGGCCGTGTGTGGAGGCCGGGCCTCCCCTG--GGGGCCTCGGGGGCGGAGGGGGGGGTCCCGCGGGGCCCGGCGCGTGCCGGGGGACCCGGGGGCGTGTCCCGCGACCCGAGGGGCGAGCGGGGGGCTTCCCCGGGGCCCGAGCGCG----CGTCGGGTGGGGCCTGAGGGGGCGCGGCGATTGTCGCCGCCCTCCCT-----CTGCTCCCGTTGGCGGGGAGAATGACAGCTGGGCGTGGCGGGC-------------------------GCGCGTGGCCCGCCCCCGGGTCTTCCCGGGCTCCCCCTCACGGGTGGGCGCTCAGATCGGCGCGGGGGAGCCCCGGGGC---GGCCCGGGGACCCTCGCGGGGGC----ACCGGCGCGTGGAGAAGACCCTTCTCCGACCCAGCCGAGCGTGACGAAGCCCCTCTCCTAAATCACCCTTGCGTGACGAAGCCCCTCTCCTAAATCACCCTTGCGTGACGAAGCCCCTCTCCGAAATCACCCTTGCGTGACGAAGCCCCTCTCCGAAATCACCAGAAAGTGGGCACTGTGCCAGGGCCTTCG-------GGACGGGAGGCCGGCGCGCGCCCGGGGTCCCGGGGGGCGGCGCGCGGCCTTCCCCCGTCTGCTCCCGCGGCCAGTCCCTGGATGTCGGGGAGGGCCCGGGGCCGCGCGTGGGGATGGCCGGCGGG---AGGGGCCGGCGCCTGCAGGGGGGGCCGGCGGGGCGTCCCGTCGTCACGCTCGGCTGCACGCGCGGCGGCGCCGGCCGGG---GGCTGAGGGGGCTCCCGAGGGCGGGGCCGG--GGCCTGGCGGGGGCCAGCGCGGGGTCCCGGGGCGGGGGGTCGGGCGGGCATGCTCCGGGGTAACGAGAGGAGAGAGGAGGGTGTGCCTGGCGGGGGAGAGGGGGCAGGGC-TGGCGCCGGGCCGCG--CCCCCGGCCCCTCTCCTGGGAG----GCCACGTGTGGAGGCCCGCGGAGAGGCCGTGTGTGGAGGCCGGGCCTCCCCTGGGGGCCTCGG-----GGGCGGAGGGGGGGGTCCCGCGGGGCCCGGCGCGTGCCGGGGGACCCGGGGGCGTGTCC---CGCGACCCGAGGGGCGAGCGGGGGGCTTCCCCGGGGCCCGAGCGCGCGTCGGGTGGGGCCTGAG--GGGGCGCGGCGATTGTCGCCGCCCTCCCTCTGCTCCCGTTGGCGGGGAGAATGACAGCTGGGCGTGGCGGGCGCGCGTGGCCCGCCCCCGGGTCTTCCCGGGCTCCCCCTCACGGGTGG------GCGCTCAGATCGGCGCG--GGGGAGCCCCGGGGC-GGCCCGGG-------GACCCTCGCGGGGGCACCGGCGCGTGGAGAAGACCCTTCTCCGACCCAGCCGAGCGTGACGAAG

a score=0.0
s NC_007605.genome 171702 121 + 171823 GGGCCCGTGGGTGACACAGGCAACCCTGACAAAGGCCCCCCAGGAAAGACCCCCGGGGGGCATCGGGGGGGGTGTTGGCGGGGGCATGGGGGGGTCGGATTTCGCCCTTATTGCCCTGTTT

##eof maf
