a score=0
s hg18.chr11 93107925 75 + 134452384 AUAUCCCUUCUUAUAUGUAUCAAAACUCAUACUGAACAAUGAGUUCUGGGUUGCAAAAGAGGAUUUAU-UUUUUGC
s mm8.chr9 108937603 74 - 124000669 AUAUUCCUUCUUGUAUAUAUCAAAACUCAUACUGAGCAAUGAGUUCUGGGUUGC--AAGAGGAUUUAUAUUUUUGC
s oryCun1.scaffold_94908 1068 74 + 5219 -UGUUCCUGCUUGUAUGUAUCAAAACUCAUACUGAGCCAUGAGUUCUGGGUUGCAAAAGAGGAUUUAU-UUUUUGC
s bosTau2.chr29 551396 74 + 45822729 AUGUUCCUUCUUAUCUGUAUCAAAACUCAUACUGAACAAUGAGUUGUGGGUUGCAAAAGAGGAUUUA--CUUUCGC
s echTel1.scaffold_316886 84615 74 - 105239 AUGUCCCUUCUUAUCUGUAUCAAAACUCAUACUGCACAAUGAGUUUUGGGUUGCAAAAGAGGAUUUA--UUCUUGC
s monDom4.chr4 174696894 75 - 430141050 UUGUCCCUUCUUGUAUGUAUCACAACUCAUACAAAACCAUGGGUUGUGGGUUGCAAAAGAGGGUUUGU-UCUUUGC

