##maf version=1 scoring=single_cov2
# single_cov2.v11 single_cov2 NC_007605.NC_004367.orig.maf
# maf_project.v10 /dev/stdin NC_007605
#
# "blastz NC_007605 NC_004367 Y=3400 H=2000
#    A    C    G    T
#   91 -114  -31 -123
# -114  100 -125  -31
#  -31 -125  100 -114
# -123  -31 -114   91
# O = 400, E = 30, K = 3000, L = 3000, M = 50"
a score=40116.0
s NC_007605.genome  1907 3766 + 171823 CTGAGAACCTGCTGCTAGTGGCGCTGCGTGGCACCAACAACGATCCCAGGCCTCAGCGTCAGGAGAGGGCCAGAGAACTGGCCCTCGTTGGCATTCTACTAGGAAACGGCGAGCAGGGTGAACACTTGGGCACGGAGAGTGCCCTGGAGGC------CTCAGGCAACAACTATGTGTATGCCTACGGACCAGACTGGATGGCAAGGCCTTCCACATGGTCCGCGGAAATCCAGCAATTCCTGCGACTCCTGGGCGCCACGTACGTGCTTCGCGTGGAGATGGGCAGGCAGTTTGGCTTCGAGGTGCATAGAAGCCGGCCCTCCTTCCGTCAGTTCCAGGCCATCAATCACCTTGTCCTGTTTGACAACGCCCTTCGCAAGTACGAT---TCCGGCCAGGTGGCGGCGGGCTTCCAGAGGGCCCTTCTG--------GTGGCCGGGCCAGAGACCGCTGACACGAGGCCGGACCTCCGCAAGCTGAATGAGTGGGTGTTTGGTGGCA---GGGCTGCTGGTGGCAGACAGCTGGCCGACGAGCTAAAGATCGTGTC-CGCGCTGCGAGACACTTACTCGGGCCACTTGGTCCTTCAGCCCACGGAGACCCTTGACACATGGA-AGGTGTTGAGCAGGGACACACGAACCGCTCATAGTTTG-----------GAGCACGGATTCATTCATGCCGCGGGGACCATCCAGGCCAACTGCCCACAGCTGTTTATGAGACGCCAGCAC--CCCGGCCTCTTTCCCTTCGTTAATGCAATAGCATCATCGCTGGGCTGGTAC--TACCAGACCGCCACCGG--------CCCCGGAGCAGATGCCAGGGCGGCGGCCCGGCGCCAACAGGCCTTTCAGACCAGGGCGGCGGCTGAATGCCATGCCAAAAGCGGGGTGCCGGTCGTGGCCGGCTTCTACAGGACCATCAACGCCACGCTCAAGGGAGGAGAGGGCCTACAGCCCACTATGTTTAACGGGGAGCTGGG--GGCCATCAAGCACCAGGCACTTGACACTGTGAGGTATGACTACGGCCACTATCTCATAATGTTGGGGCCATTCCAGCCATGGAGCGGACTGACGGCCCCTCCGTGCCCCTACGCCGAAAGTTCATGGGCACAGGCGGCCGTGCAGACGGCCCTCGAGCTGTTCTCGGCCCTGTACCCGGCCCCGTGCATCTCGGGCTACGCGCGCCCCCCGGGCCCCAGTGCTGTGATCGAGCATCTGGGGTCCCTAGTTCCAAAGGGGGGTCTGCTGTTGTTTCTGTCTCACCTACCGGATGATGTTAAGGACGGGCTCGGAGAAATGGGGCCGGCCAGGGCCACGGGACCTGGAATGCAGCAGTTTGTCAGCAGC--TACTTCCTCAACCCCGCCTGTTCCAACGTCTTCATTAC----AGTGAGGCAGCGAGGGGAGAAGATCAACGGCCGTACCGTCCTCCAAGCGCTCGGACGCGCATGCGATATGGCAGGCTGCCAGCACTATGTGCTGGGCTCCACGGTTCCCCTCGGTGGACTCAACTTTGTCAACGACCTGGCGTCCCCGGTTTCCACCGCCGAGATGATGGATGATTTCTCTCCCTTCTTCACCGTGGAGTTTCCCCCGATTCAAGAGGAGGGCGCAAGTTCTCCGGTACCCT----TAGATGTGG--ACGAGAGCATGGACATCTCTC--------CGTCTTACGAGTTGCCCTGGCTCTCGCTGGAGTCATGCCTCACAAGCATCCTGTCACACCCCACCGTGGGAAGCAAGGAGCACTTGGTCAGGCACACGGACAGGGTCAGCGGAGGACGCGTGGCACAGCAGCCCGGGGTAGGTCCCCTGGACCTGCCGCTGGCGGACTACGCCTTCGTTGCCCACAGTCAGGTCTGGACCAGGCCCGGTGGGGCTCC-TCCCTTGCCCTATCGTACC-----TGGGAT---------CGAATGACAGAGAAGCT---------GCTTGTCTCCGCAAAACCCGGCGGAGAGAACGTTAAGGTTTCAGGTACCGTGATTACATTGGGAGAACAGGGGTACAAAGTGTCGTTGGATCTGAGGGAGGGAACCAGGCTGGCAATGGCTGAGGCGCTGCTGAACGCAGCATGTGCCCCAATCTTGGATCCGGAAGACGTCTTGCTCACCCTGCATCTACACCTGGATCCGCGCCGGGCAGACAACT-CGGCCGTGATGGAGGCTA-TGACGGCGGCGAGTGACTACGCGCGTGGCCTGGGCGTGAAGCTGACCTTTGGCTCGGCCTCCTG-CCCCGAGA---CCGG-----------CTCGTCC------GCCTCCAACTTCATGACCGTGGTGGCCTCTGTCTCCGCCCCAGGGGAATTCTCGGGTCCTCTGATCACGCCAGTGCTTCAGAAGACGGGCAGTCTCCTGATTGCGGTGCGTTGCGGGGATGGCAAGATCCAGGGAGGGTCGCTGTTTGAGCAGCTCTTTAGCGACGTGGCCACGACCCCACGGGCACCCGAGGCGTTGTCTCTGAAGAATCTCTTCCGGGCAGTCCAGCAGCTGGTCAAGAGCGGCATCGTGCTGTCAGGGCATGACATCAGCGACGGGGGCCTGGTGACCTGCCTGGTGGAGATGGCCCTGGCCGGGCAGCGGGGAGTGACCATCACTATGCCGGTGGCCTCCGACTACCTCCCGGAGATGTTTGCAGAGCACCCCGGCCTGGTGTTTGAGGTGGAGGAGCGCAGCGTGGGTGAGGTGCTGCAGACCCTGCGCTCCATGAACATGTACCC---GGCAGTCC---TCGGTCGAGTGGGCGAGCAAGGTCCAGATCAAATGTTTGAGGTGCAGCACGGCCCAGAGACGGTGTTGCGCCAGTCGCTGCGCCTGCTGCTGGGAACCTGGTCATCCTTTGCCAGCGAGCAGTACGAGTGCCTGCGACCAGATCGGATTAACCGGTCCATGCACGTGTCCGACTACGGCTATAACGAAGC----ACTGGCAGTCTCCCCGTTGACAGGAAAGAATCTCAGC----CCACGCCGGTTGGTGACAGAGCCTGACCCACGATGTCAGGTGGCCGTGCTATGCGCCCCGGGCACCAGGGGCCATGAAAGCCTCCTGGCGGCCTTCACGAATGCCGGATGCCTGTGCCGACGGGTGTTCTTTCGCGAGGTTAGGGACAACACGTTCCTCGACAAGTACGTGGGTCTGGCCATCGGAGGAGTTCATGGGGCCAGGGACTCTGCCCTGGCAGGCCGTGCCACCGTGGCGCTGATTAATCGTTTCCCCGCCCTGCGTGACGCTATTCTAAAGTTCCTCAACAGGCCAGATACGTTCTCGGTGGCCTTGGGGGAGCTGGG-GGTGCAAGTTTTGGCTGGCCTGGGGGCCGTGGG----GTCAACAGATAATCCACCCGCCCCTGGCGTGGAAGTTAATGTC-----------CAGAGATCACCTCTGATTCTGGCCCCCAACGCCTCTGGCATGTTTGAGTCCCGCTGGCTGAACATTAGCATCCCGGCGACCACCAGCTCTGTCATGCTGCGTGGCCTCCGGGGCTGCGTCCTGCCTTGTTGGGTGCAAGGCTCGTGCCTGGGCCTGCAATTTACTAACCTCGGGAT-GCCATATGTTTTGCAGAATGCCCACCAGAT----CGCCTGC-CACTTCCACAGCAATGGCACGGATGCCTGGCGCTTTGCTATGAATTATCCAAGAAACCCCACGGAGCAGGGCAACATTGCAGGGCTCTGTTCACGCGATGGTCGTCATCTGGCTCTCCTGTGTGACCCCTCACTTTGTACAGACTTTTGGCAATGGGAGCACATTCCCCCCGCCTTTGGGCACCCCACGGGGTGCTCCCCCTGGACACTTATGTTTCAAGCAGCTCACCTATGGTCACTCAGGCA
s NC_004367.genome 11272 3796 - 149696 CTGAGTGGCTTTTAATGGTCGCCCTTCTCGGTGACCAGAGTGATCCTAGGCCCGTGCGACAACAGAGAGCTCGGGAATTGGCTCAAGTGGGAATTCTATTAGGAAACAGCGTTGAAAGTGAGGTTTTCACTACGGATAGCTCTATAATTGCGCCTGACACGGGTAACACTTTTTCCTGCACATATGGTCCTGACTGGCTTTCGAGGCCTACGACATGGTCTTCTGAACTTCAGCACATATTAGAAATTCTGGGTTTGGGTAAGGTTTTGCGAGTTGAACTCTGTCGACGGATTATTATCCCGGTAGGACAAAGACGGCCAAATCTCAATCATATTTCTGCCCTAAACCGAGTAGTGCTGTTTGACCGGCTTTTCAATAGATATGATGCATCTTTTCCCGGGCCGGCAATCAGAACGAACACGCTATTGCCAACAAATTCGCCGCAGCAAAGATCATCAA----AGGTCAGCCTTATG----------------GTGTTTGGGGACATTAGAAATGACGGTGTGGGTTCCATGGCGGACGAGGTAAAATTGGTGTCACGCGATG----ACAATTATGCCGGCCCTACCATTCTTTATCCCACCTTGGATGCTGATGTCTGGAGATATTTTCTGAGGGAATCCTCTTACTCTTCTGATTCTGCTGCGGTAAAGGAAATGGGGTTTATGCACGTAGCCGGCTGTATTGAGACTCTTTGCCCGCAACTAATGGTTAAGCGTCAGCATATCTCGGCAT--TTCCTTTTGTGGAGCCGCGGGCAATTTGCTTGGGTTGGTATGATGTCAAGTCTCCTCCGGGACAGCAATCTCTTGGAAAGTGCAGTGAACGCGA----GCGTATACTGACCGTCCAA------GTGGCGACCCGGAGTTTCTCCGGCCTCGGAACGCCAACGGTTGCCGGGTTTTACCGAGCCATGGATGCTGATGTTGTAAATGGATCTGGACTGCAGAATACTATGTTCTCCTGTCAGCTCGGATGTGTGTCAGGA--CAGGCTATGGAGTCTAGTCGTTACGGCTACGGACAATATGTGGTGATGCTTGGTAATTTTTCACCATCATTCACCGCGTTGGATCCGCCTGGCATGTTCGCAGATAGCGGTTGGGAGCAAAACTGTACACAGACGGCTTTAAATGTTTTTAAATCTCTGTACCCAGGACCGTGCATTTCTGGAAGCCGATGTCCAGCGCATCCAGCATCTGTGCTGGAAACACTGTCTACTCTGATTGAAAAGGGTGGCCTCCTGATTTTCTTGTCCAGTCTTCCACCTAGCAT--AACCCAGCCTTTACTAAGGGGAGATGCCTATGACGGAGAGAATTCGCTCATGTCTGACTACTACAAGCAATGTTTCCTATTCGCCTCGTGCACAAATCTGTTCCTGATCATTAATGAGGCATCGAAAG-------TTGGTGGTTTTACGCCTCTAAAGGCCCTTCGGCGTGCATGTCTATTGGCAGACTGCCCTCTCCACATTCTTGGTTCTACCGTTCCACTTGAGGGTATCAACTTTGTCGCTGATGTGGATAACCCAGTTCCTACTGAAGATTTTACAGATGATCACGCTCCTGTGTTTACCGT----CCCCCTCCTGTTACCGAATAAAAAGGCCATCAGACGACATCCTGGAGTAGCTACAGTAACCAAGGCATACAATTCCCCCGATGGTGATGACATA-GAATGGTCTATGCTTTGTCTAAATTCATGCCTGACTCAGGTTCTCTCTCATCCTACTGTTGGAAGCAAGGAACACATAGTTAGACACATGGATAGATGTTCAAACGGTTTAATTGCTTTGCAACCAGGTGTCGGACCACTTGACATACCTGTGGCTGATTACGGTTTCGTGGTCTCCAGC---------AGCATATATGATGAAAAGCAGTCCGATGTTTTACCGTACACAGCGTGGGATAATGCGGCGCGAATGAGACGTGAACTCGAGCCTGGGACTGCCCTTCCAA----CTGTGAAAGGGACG-----------------GTCATGGTATTGGGTGAACAGGGGTATAAAAGTATGCTTAGTCTGGATGCGGGAATTAAGCTGTCTATTGTGGAGTCAGTGACTAATGCTGCATTTGCTCCCGTAAAACGAATTGAGGACCTCCTATTGACACTCTATCTACACTTGGACGAAATTGAAACAGATAAAAATGACCTTG--GGAGACTACTAGCGCAAACCAGAGCCTATTGTAGGGAACTCGGCGTACGTCTGACCATAGGATCGGCTTCAAGTCCCCGAGATGCCCGGGAGATGGAATTCGCGTCGCAAGAGGCAACAAAATTTAGAACCGTGGTGTGTTCTGCGACAGCCCCTGCCCAATTTAGTGGCTATTTGTTGACGCCGGCCCTGCGAGGGGGCGGCACGGTCTTAATTCATGTAAGTGTGGAAGACGGCCCAACAATTGCCGGATCAATATTGGAACAGATTTTTGCTGGGAAGCCAAAGATTCCGACTATACCGCGGGTCTTACGCGTGAGGGAGCTTTTTCTGGCCATCAAAGAGTTAATGGCACTCGGCATGGTTGAATCCGGCCATGATGTCAGCGACGGCGGTGTATTGGTATGCGCAATTGAGATGGCCTTAGCGGGAAACAGGGGAATCAAAATATCGGTACCTGAGGATCAGGATATCATGGAGGAAATGTTTTCTGAGGCCCCAGGGGTGATCTTTGAGGTACACAGGGCCCACGCTGAGCGCGCCCTGAAGGAACTGCA------AGGCAGGCAGCTTAGAGCATTCCAGATAGGTGCTGTAGGGGAAGAGGGACTCGACAAATTGATTGAAATTTACCACGGCCAGAAATTGCTTTTCCGGCAGTCAATCTCCTTAACTAGAGGTACCTGGTCTAGTTTTTCTATTGAGCAATACAACTTTCTTCGTCCTGAATCAGTCAATACCTCTATGTACGCCATGGACTACGG---TAACCCAGTTATTACCCTTAAACATCCCG-----AGGAAGAATTCTATACGCAACCACTTAACTTAGTCACCCACCCAGATCCTCGCTGCCGAGTAGCAGTGTTGTGCTGCCCGGGGACAAGCGGCAGCGACCCACTTATGGCCGCATTTACAAATGTAGGCTGCCCGTGTGTTCGCGTGCTGTTTCGGGAAGTGAAGTCTGAAGCATTCTTTGACCAATTTTCCGGCTTGGTAATAGGTGGCGCTTGCGGGGCTCAGGACGCACTCACGGTTTCCAGGGGCATCGTCATGACAATTACCAAAAAAAGCAAGCTACGCGATGCCCTGCTAAGATTTTTTCAAAGGAAAAATACATTTTCTCTGGCTGTAGGGGAAATAGGCTGTGCAA-TTTTCACCGGCTTGGGTATCGTCGGTAGTATCACC-GACTATCCACAC---CCGGGC----ACACCAATATCACTCGAATCGGCAGAAGTTACTT-------TGGCCCAAAACGTGTCAACCATGTATGAATCACGATGGCTCAGCTTTAGCATCCCGCCAACAACCAACGCCGTAATGTTACGTCGCCTGCGCGGTCTCATCTTGCCTTGCTGGATTCAGGGAACTTATTTGGGATT-CAACTTTCTAACTCCTGCATCTCCCTATATTTTGCAGGA-----ACGAGGTCTTACGGCGGCACATTTCCACGGATCGGGATCTCATCCATGGAACACTGCGCAGCATTATCCACGAAACCCGGCTGAAGCCAATAATGTAGCCGCGCTTTGCTCCGCGGATGGTAGACACCTGGCTATGTTATTTAACCCAAGCCTTTGTACACAGCTGTGGCACTGGCCACATATTCCCTTCCAAACAAGATCCCACTTGCTAGGCTCTCCGTGGCTTCTCGCATTTCAGGAAGCACACATTTGGGCTGTTAGTCA

a score=5128.0
s NC_007605.genome 13591 643 + 171823 CTCGTCCACCCCTCCCCACGGTGGACAGGCCCTCTGTCCACCC---------GGGCCATCCCCGCCCCCCTGTGTCCACCCCAGTCCCGTCCAGGGGGGACTTTATGTGACCCTTGGGCCTGG-CTCCCCATAGACTCCCATGTAAGCCTGCCTCGAGTAGGTGCCTCCAGAGCCCCTTTTGCCCCCCTGGCGGCCCAGCCCGACCCCCGGGCGC--------CCCCAAACTTTGTCCAGATG------TCCAGGGGTCCCCGAGGGTGAGGCCCAGCCCCCTCCCGCCCCTGTCCACTGCCCCGGTCCCCCCAGAAGCCCCCAAAAGT-------AGAGGCTCAGG-CCATGCGCGCCCTGTCACCAGGCCTG----CCAAAGAGCCAGATCTAAG------GCCGGGAGAGGCAGCCCCAAAGCGGGTGCAGTAACAGGTAATCTCTGGTAGTGATTTGGACCCGAAATCTGACACTTTAGAGCTCTGGAGGACT----------TTAAAACTC---TAAAAATCAAAACTTTAGAGGCGAATGGGCGCCATTTTGTCCCCACGCGCGCATAATGGCGGACCTAGGCCTAAAACCCCCAGGAAGCGGGTCTATGGTTGGCTGCGCT-GCTGCTATCTTTAGAGGGGAAAAGAGGAAT---------------AAGCCCCCAGACAGGGGAG------------TGGGCTTGTTTGTGACTTCAC
s NC_004367.genome 23154 664 - 149696 CTAGTATCCCACTTTCCACCCTGTGTAGGCACCAAGTCTGCCTCAGCTCCAAGGGGTATCAGTGTCCCCCTAAGACC-CACCAGGACCACCCTGGAGCCCCCAAGTCTCCACCTTGGGCCTAGTCTCCCCATAGACTCCCATAGAAGCCTGGCTAGAGTAGCAGTCTTCCTAGCCCCT--------CCAGGGGTCCCAGTAAGACATACAGGCGCGTGCCTCACCACAAAGTT--TCCTTATGGACTCCCTCACTAAACACCACCAACAGGGACCAG--GGGTCCCACTCCTTTCTGGTACCCC-----------AAGCGCCCAAAAGTTTTAGACAGTTCCTCGGGTCCCCAAGTGTCATTTTACCGGGGCTGGGTCCCACA---CCAGTCCCAGGGAGGGTGTCAGGAG-GCCGGCTACTGGGTTAGGGCA-CGGTAGGGTGTCTCTGTGAGCCCTTCTGA----------GGCACTTTGTAG---TGAAAAATTGAGTTTAGTGTCCAAATTTACATAAAAATTCAATGCTGAAGGCTAAAGGGCCGCCATTTTGTATCTGAGC-CGCCATGTTGCGAGCT---GCTGAAAGTC----------------ACAGTTGGCCTCACTCGTGGCTATCTTTAGCGTGGGAAACAGGAATTGGGCCTGTGCTGGGAGGGCCCCAGAACTGGGAGGACCACATCCGCTGGGCTCACCTAAGACGTCAC

a score=5629.0
s NC_007605.genome 36382 137 + 171823 GGGGGTGCCCCCACCACTCCCACCACCCCCCCCACCACCACCCCCACCACCCCCACCACCCCCACCACCCCCACCACCCCCACCACCTCCACCA---------CCTTCACCACCACCCCCGCCCCCACCACCCCCACCACCTCAGC
s NC_004367.genome 69821 146 + 149696 GGGGGAGTCGTCACCCGGTGAACCCCTACCGCCTCTACCACCCCTACCGCCCCTGCCACCCCTACCGCCTCTGCCACCCCTACCGCCCCTGCCACGGCTAGCGCCTCTCCCACGGCTACCGCCTCTTCCACCCCTGCCTCCTCTGC

a score=7722.0
s NC_007605.genome 40395 869 + 171823 CCAGGCAGGGACCCCGCGCCA---CCCGCTTCATGGGGGGGGAGGCCGCCGCAAGGACGCCGGGCC--GGCTGGGAGGTGTGCACCCCCCGAGCGTCTGGA-CGACGCTGGCGAGCCGGGCCGGCTCGCCTTCTTTTATCC-----TCTTTTTGGGG-----------TCTCTGT--------GTAATACTTTAAGGTTT-GCTCAG--GAGTGGGGGCTTCTTATT-------------------------------------------GGTTAATTCAGGTGTGTCATTTTAG---CCCGTTGG---GTTTCATTAAGGTGTGTCAC-----------CAGGTGGGTGGTACCTGGAGGTTATTCTATTGGGATAACGAGAGGA-GGAGGGGCTAGAGGTCCGCGAGATTTGGGGTAGGCGGAG-----------------------CCTCAGGAGGGTCCCCTCCATAGGGTTGAACCAGGAGGGGGAGGATTGGGCTCCGCCCCGATATACCTAGTGGGTGGAGCCTAGAGGTAGGT---ATCCATAGGGTTCCATTATCCTGGAGGTATCCTAAGCTCCGCCCCTATATACCAGGTGGGTGGAGCTAGGTAGGATTCAGCTAGGTTCCTACTGGGGTACCCCCCTACCCTACCTTAAGGTGCGCCACCCTTCCT-----CCTTCCGT----TTTAATGGTAGAATAACCTATAGGTTATTAACCTAGTGGTGGAATAGGGTATTGCAGCTGGGTATATACCTATAGGTATAT---AGAACCTAGAGGAAGGGAACCCTATAGTGTAATCCCTCCCCCCCCTACCCCCCCCTCCCTTACGGTTGCCTGAGCCCATCCCCCA--CCCCAGCACCCCGGGGTGACGTGGCACCCCGCGTGCCTTACTGACTTGTCACCTTTGCACATTTGGTCAGCTGACCGATGCTCGCCAC-TTCCTGGGTCATGACCTGG---CCTGTGCCTTGTCCCGTGGACAA-TGTCCC
s NC_004367.genome 33122 895 - 149696 CCAGGCCAGGACCCCGCGCTTGTTCCCGGTTCATTCGGGGGGGGGCCGCGACCTGGA-ACCTGACCAGGGCCGAGCGGTCTA-GCCGCCTGGGCGTCCAGAACGCCGCTGA--ACCCGGGCAGGCGCGC-TCCTTATATTCAGTTCTGTCCTTGGGTGTGTCCCATTCTCTCTATTCCTATTGGTTAAACCTTAAGGTCTCACTCAGCTGAGTTATTCCTTCTGGTTTCTCGTGTTCCTATTGGTTCCTACCTATAGGTCCCACCCTACAGGTTAATCCTCCTGGTTCAATCTGGGCTCCTATTGGTTAATACCTGTAGGTTGTGACCCACAGGGTTACTCAGGTGGGTAAT-CCTGGAGGTAATTGCATTAGGTGAACGGGAGGAGGGAGGGGTTTGCAGC---TGAAATTGAGAATGGGCGGAGCTAGGGACCTGCTGAAGCTCCGCCCTCTGGGTTGTAGTCCCATTGGGTTTAATTCAGTGGGGGGGGGGTTTGGGGTTCCCCCGATATACCTA------------------TAGGTTCCACCCACCGGGT---------------------TAAACCCCGCC----------------------------------CATTTTAATTCCAGCGGGATACCCCCCCTATTCCAC---------TGCCGTTTATCCTATAGAATTTCCGCTGGGTTCCACAGGAGGGTACCCTTCGGTAGGTACCCCTACCGGTAGGTATTGGTACTACAGGCGGGTATATATA-ATATATATATAGGAGAACCTATAGGA--TTAACCTAGAAGAGATACCTAACCCCCCCCTAACCCCCCCCTTCCCAAATGTAGGTCACCCCATCCCCCACTCTCCATTGGCCC--------------CATTGCGTGCCTTTCACCTCTGTCATCATTACACATTCAG--GGCACACTCATTCCTCCGGCATTCGGGGGTCA--ACCGGGGGACACGT-CCCCGTCTCGCGGACAACTGTCCC

a score=2911.0
s NC_007605.genome 42391 146 + 171823 TGGCCTGGATGGCCTGGTGCA----TGCATGCCTGCAGGACATTGTGTTGTAACCAGTCTACTCCTTACTATGTTGTGGACCTGTCAGTTCGTGGGATGTTAGAAGCCAGCGAAGGCCTGGATGGTTGGATTCATCAACAGGGCGGCTGG
s NC_004367.genome 35363 140 - 149696 TAGTTTGGCTAGCTTGGTGCTGTTTTATGTGCC-GCTGCACTCGGTGTTGTGAAGACTATAATCTGGTAGATGCTGT---------ATTTCGAGGTGTTTTAGAATCAACGGAGGGTATTGACGGTTGGATTCATTCTCATGGTGGCTGG

a score=36644.0
s NC_007605.genome 43595 1796 + 171823 CCCAAGTTTCGCAGGTTTCCCCCATGCTTCCACCC-----GTTAACCCAATAGCATGACAGCCAA---------------TCCAACACGAGGCAAGTTTTAAG--AGTTAAA----AGCAACT-ACTGTTTATTTTCCAAAATGAGCTGGGTATAGTTGATGATCTGTAGGCGCAGCTCATCCCCACATTCCAGGTCCTTGATGGCCTCGTAGATGGCATCTTCGTCGACATTGACAGCCTTCTCATATACCGTGTCTCTGGGGCTGACCTTTATACAGAAGGCGTCCCCTACTAGGTCCACGGCCAGCTCGTAGGTGGGGCCTATGTTTTCACATAACAGTTTCAAGCAGGTCTCTGGGATGTGAAGGGAGGTGCCCTGGAGCAGGAGATGCATGATTAGGCGCCCTTTTCCATTTGTGCTGAAGATG------GGGCAGATGGTGCCACAAAAGTGTCCGGTGACCAGGTAAGCGTAGAGAAGGCTGGGTTGGGAAAGTCCAGCCTTTACTGCACTGGGAGAGCTGCTGAGCAGAGACACATAGAAGGTCTTGTTGGGTATTATCTTGTGGACATTGTTGAAGAAGGAGAGCTGGGTGGAGCTAAACTCCTGAGGCACATGAACCTGGGACCTATTGATGCAGATCTCGCAGTGAGACCCCAGAGTCAGGCTGTGGCCGAAGGGAGACAGGCGAAGGCAGCGCCCGGGGGAGAGAGTGCACAGTGACAGTGGGAGAAACACGGCCTCTGAGACATGTATGGGGGTGTTCATCTCACGCAGAAAATCTTTGCCCAGCTCAAAGTTGGCAGAGATTCCCCTGAAGAAGTCCCGTAGTGAAAAATGGGATCTGTCTACACCATGTCTGGTGTGCCGGGAACATATTGATCGGGCCACACTGCCAACCCTTTCCATTCTTCCCAGCTCTGAGCGAGATTTTCCACACCTGGACACCGACTTCACGCTATGCGCCGAGGCCTTTGAGGCCG-TGTAGTTTCTG--TGGTGCGGATGCATTAGGC--GGCGCAATGCGGGATCTGCCGGTCGCTGTTGGCGTGCATTCACGGCATCT--GGGGTGACCGGGGCCATCGG-------------GTTTACTTTTCACACGTAGACCTGGGAAGTTTGATAGGACTGTACCAGGTCAAGGCCGTGGATGCGCAGGACCACGTCCAGTTCCTTAGTGACATCCACGAGGATTGTTTTGCCCACTCTGGCCACTTGTGTGGATTTAAATATGTACACAAGCGTAATTAACGAGTCACAGACCCCCTGTTCCAGATTCTGACCGGCTGCAAGCGCTGCCTTAAAGGCCTGGAAGCTGGGTG---------GGTAAATCTGACCAAACAGCACGCTCGGATTCGTGATGCTGTGGTTGATGGCACACAGGGGGTCGCAGAACAGGTGCTTGTGGAAGTCTTGCGGGGTGCACATCTGCAGCCAGGCCCTTAGCCTGGGGCATGGCACATCCAGCAGCGTGTTTTGGGTCTTGATGAGGAACACGATCCTGTCTAGGATTTTGATGTTGTTGCCGAACGAGTCAAGAATCAGGCTCTTGAAGCGGTCAAGGGTGTCCTTGGCGTCCGGGTGGGCCCCGAGGCTCTCGCAGAGTGGGCAGATGGTCCGTGAGGCATTCTTGTGCCTTAGTCCAAACATGGGGGCCAGGAGGCAGGGGCCCTGCGAATGGTCGCCAGCCTCCGGTCTGGTGATGGCCAGGGCCAACTCCGCCAGCTC-----------ATCGCCGCTGTATTCCG------CGTTTAAACCGATAGCATGGTGGCCTGGCCCCCCGAGCAGGTCCGTCCCCTGCCACGTACCTAATAGTAGTCCACAGTAGTCGGCCTT
s NC_004367.genome 36208 1820 - 149696 CCCAATTTCCGCG-------CCCATACCCTAGCCCCTGGCGTTTAACCTATAGAATTACGGTAAGGATATCAAATTAGGCCCTAACAAATGACAAGATATAGATTAGTTAAAGCAGAACGATTTATTGACTTCTCTCTGATATGAGCTGAGTGTAGTTGATGATTTGTAATCTTAATTCATCGCTCCAGTCTAGGCCCTTGATTGCTTCATATATGGCGGATTCGTCGACACTGATAGTTTTTTCCTGCACGCCTTCTAGGGGCTCAAAATGTAGGCAGAATGTCTCTCCTATTAAATCCAGAGTTATGTTATAAGTAGGACAGATGTTGCCACTGAGGAGCTTAAGACACGTTTCAGATAGGTGAAGTGACGTTCCTGGAACCATTAAAAACATTGTTAG------TTTGCCCCGGGGGTTGAATGTAAAAACTGGGCATGCCTTCAAATCAAAATGCCCGGCCAGGATAAATGCATATAAAAGTGTTGGCTGCCTAATTCCAGCCTTAACCGCATCCGGTGAGTTACTGAGGAGGGACACATAGAATTGCTTGTGAGCAAGAACTTGGTGTACATTGTTGAAGAATGAAAGTTGAATTGAGCCAAGTTCCTGAGGGATGTCCAGTATAGCTCTCCCTGCACAAACATCACAGTGGGATCCCATGACTAGACTATGTCCGAAAGAGGAGAGTTTTAAGCACCTCCCCGGGGGTACCGATGCCAGTCTAAGAGGTACTGAAATAGATTTGGAAACACATATAGGGCGGTTTATCTCTCTTAAAAAATCCTTCCCCAATTCAAAATTTGTAGAGATGCCTGTAAAGAACCTGTCTAGTGTCAGCTGGGTGCCG-----AGTCTGTCCTGTG----------ATTTTGAT-GAGCCATTGTGTTCATTTCTTCTGTGACGGGAAACGGTGGAAACAATTGTTCTGGCCCTAATACCAGGCGCCCGAAATTTCCAAGGGTCTTTTTTGACGATTTTGTTAACGCCTCGTGTCGA---ATCGGGCCTGGCATACTGCGAA---TAACGTCCGCCATTCTTGCGTGTCAGTTGTGTGTAGGGGGCGAATTTAGGCATTGTATGTAGTGTGGGTGTTTAGACTTCAGACGTAAATCTGCGAGGTCTGGTACGTCTGTATAGTCTCTAAACCGTGACGCCTTAAAGCCGCATCCAGCTCTTTTGTGACATCTACAAGTATAGTTTTGTTTATTCTTGAAACTTGAGCTGATTTAAATATGTACGTAAGTGTAATTAGCTCATCACATACACGGTTTTCTAGGTGTTCACCATTGGCTAATGCCGCCCGAAATGCC-----GCAAGGTGTTCTCTTTTAGGAAGTC----CAAATAAAACCCCATGATCTGTTGTCTTATGATTGATGGCACACATTGGATCACAAAAGAGGTGTTTGTGAAAGTCTTGCGAGGAACATCGGGATAGCCAGGTTTTTAATCGGGGGCATGATACATCCAGAAATGTATGAGAATCTTTGAGTATAAAGGCAATTCGGTCTAGAATTTTTATGTTGTTCCCAAATGAAGCCACTATGCGTGCTTTTAGGCGGTCCAGGGCGGACTTGGCATCTGGATGTCCGGCCAGGATTTCACATAGTGGACATATTGTGCGGGATGCATTTTTCTTTTTTAGGCCAAACATAGGAGCGAGTAGGCTTGGTCCCTGTGAGGTGTCAACATTCCCGGG--GGGT---------GTCCAATTCTTAAAACTTGAGAACAGGGAATTGACACTGTCTTTCATCTGCCCGTTAATGACAATGGAGTATCTGTCTGGTTTTTCCAGTAAGTCGGTTCCTTCCCATATGAAAGTTAAGAAATCACAGAAATCATGCTT

a score=16092.0
s NC_007605.genome 45571 476 + 171823 TCTGGGCCACATGGACTTGAAGCAGAAGTTGGCCGGGGACTGGCCGGTGAGGATGGATTTCAGAAACTCCAATTTGTAGTAGCCGAGGTTGGCATTTCTAATCATGTCAGAAGAGGACACAGGGAGGAAGCACCGGCAAATGTAAAAGTGAAGCTGGATGTCAATGGCAAGAATCCTGGAGGGCATGAAGAGGGAATCCAACCCCCCGGCCATGGGGAAGTATTTTATCAGGATGTGTAAAAAGTCCATGCCTGTGATGAGGCTAGAGATCCAGGCTCGTGGGGCATTTAGACAGTAGTAGCAGAGCAGGGCATAGTCCTCAAAGAAGGCCACGGGGGCATCTGAGTGATTGACCAGGGTGTCGAGCAGATCACAAACTCGGCAGGTGCTGGCTGGAGAGAGGGACTCGTAGGTGTGGACGAG----TGGTGGGTAGGCTATGCCTTCTTCCGCGTTGGCTGGAAGATAGGAGTGGGCCA
s NC_004367.genome 38211 476 - 149696 TTTGGGCCACATGGATTTGAAGCAGAAGGTTGCAGGCCCCTGTCCCGTAAGAATGGCCCTTAAAAACTCGATTCGATAGTATCCTAGATTAGCACCATGAATCATCTGTGTAGTTGTGATTGGGAGGAAACACCTGTTCACAAAAAAGTGCAGTTGCACATCAACGGCTAACAGGCGGTGGGGCATGAATAAGGTGTCCAGACTGCCAGCCTCTGGAAAGTGAGCCATCAATAAGCGTGTAAAGTCCACTGCGGCGATGACTGTCGAGAGCCAAGCCCTTGGAGCTCTACTACAAACGTAGCATAGAAGGGCATAGTCTTCGAAGAAGGCTATGGATGGGTCCGTGTGGTTTACTAACGAGTCGAGTAGGTCACATATTCTACATGTACTTGCTGGAGACAGGGATTCATATGTGTGTGCCAGAACCTCGTTTTTGAGC----CCCTCGTCCGTGGCTGTGGGGAGATACGAGTTGGCCA

a score=25061.0
s NC_007605.genome 46408 755 + 171823 CCTAATTGCGCCATCTGCCTACGCGAGGCTGAACCTCCTGAATCACTGCATCTTTCTTGAGGCGTTTAAAGAAGAGAATAGTGGCCAGGGCCTCGGTGGG---GTCCAGCGTGAGGTCTTATTTTTGAAA-AGGGATATTATAAAACAGGTCATTGCTCGGATTGTGGCAGCCGATAGCACCCTAGATCTAGTGAATCA---TGGCGAGCCCGGAAGAGAGGCTCCTAGACGAGCTCAATAACGTAATTGTGTCATTTCTGTGTGACTCTGGGTCTCTGGAAGTGGAGAGATGCTCCGGGGCGCATGTGTTCTCCAGGGGCAGCTCCCAACCCCTCTGCACCGTGAAGCTGCGCCACGGACAGATTTACCACCTGGAGTTTGTCTACAAGTTCCTGGCCTTTAAGCTGAAGAACTGCAACTACCCCTCCTCGCCCGTGTTTGTGATATCCAACAACGGCCTGGCCACCACCCTGAGGTGCTTTTTGCACGAGCCGTCGGGTCTCAGATCGGGCCAGAGCGGCCCTTGCCTGGGT---CTCTCAACGGATGTTGACCTACCAAAGAACTCCATCATTATGCTGGGCCAGGATGACTTCATTAAGTTCAAAAGCCCCCTGGTCTTCCCTGCTGAGCTTGATCTCCTGAAATCTATGGTGGTCTGCCGGGCCTACATCACGGAACACCGGACGACGATGCAGTTTCTGGTGTTTCAGGCCGCCAACGCCCAGAAGGCCTCGCGGGTCATGGATATGATTAGTGATATG
s NC_004367.genome 39075 765 - 149696 CTTAATCGCGCCTACTCCATTTTCTAGGCTAAACCTTATAAATTATTGCTTGTTTTCCACTGTGTTTTCCCAGGAAAGCAACAGCGAGGTTTTTGTACCGAATGTTCACCGTGATGTGTTATTTTTTAAAGAAGGATATTATTAAACAGATTATAGCACGGATTGTGGCTGCTGACAACGCTTTAGATCTAGCTGGTCAACATGCAGGACCGGGGGCAGAAGTTTATAGACGATCTTAATAACATCATCGTGTCCTTTTTGGGTGACTCTGAAACTTTGGAGGTGGAGCGATGTACGGACATGCATGCTCTTTCGAAGGGTAGTTCTCATCCTATCTGTGTGGTGAAACTCAGGCATGGAAAGATTTATCATCTTGAATTTGTCTACAAATTTTTAGCCTTTAAACTTAGGTGTGAAAAGTATCCCTCTTCCCCCGTTTTTGTAATTTCGAACAATGGGATGGCCGCAACTCTTAAGTGTTTTCTAGGTGAGCCTTCCGGTTTGAGGGAACAACAGGGTGGAACAAGTTTAGTTAAACTGGCTACAGATGTGGATCTGCCCAAGAATTACATGATTGTTATTGGGCAGGATGACTTTATCAAGTTTAAGTCTCCTTTTGTGTTTGCTCGAGATCTGCACACGCTGCGTTCCATGGTTGTATGTAGAGCGTATCTCACTGAGCAGAGGACAACCATTCAGTTTTTGGTGTTGCAAAGTGGAAACGAACACAAGACCTCCGGCGTTTTAGATATTATTCGGAAGATG

a score=20095.0
s NC_007605.genome 47908 1544 + 171823 CACCGGTGGTGGGTGTGGAGCCGTGGCCTTTTGCAACGCCTTTTTCCTAGCTTATTTTTTGGTTGTGCGGTCTGTTTTCCCCGCGTTTTCCGATAGAATAGCTGCCTGGATCTGCGACCGGTCCCCTTTCTGCGAAAACACCCGGGCCGTGGCCAGGGGTTACCGAGGCCTCGTGAAGAGGTTCTTGGCATTCGTGTTTGAGCGTAGTA--------GCTATGACCCCCCCTT-------GTTGAGGCAAAACTCTAGGCCTGTGGAGCGCTGCTTTGCCATCAAGAATTATGTCCCGGGCCTGGACTCACAAAGCTGTGTGACGGTCCCGAGCTTC-----TCCCGCTGGGCCCAGTCTCACGCCAGCGAGCTCGATCCCCGGGAGATTCGCGACAGAGTTACACCAGCGACTGCACCTTCGTTCGTGGCTGATCATGCCTCGGCTCTATTGGCCTCCCTCCAGAAGAAGGCCTCCGACACCCCCTGTGGGAATCCCATTCAGTGGATGTGGTACCGCCTGTTGGTAAACTCGTGCCTGAGGAGTGCCCACTGTCTTCTGCCTATACCTGCCGTCTCTGAGGGGGGGAGAAAGACGGGCGGGGGCGTAGGGGAGGAGCTCGTGGGGGCCGGGGGGCCCTGCCTGAGC-------CGG-----------GATGTTTTCGTGGCGATCGTAAGCCGCAATGTTCTCTCGTGTCTGCTGAACGTGCCTGCCGCGGGTCCCCGGGCCTACAAGTGTTTCAGATCCCACGCCTCCAGACCGGTGTCTGGCCCGGATTACCCTCCCTTGGCCGTGTTTTGCATGGACTGCGGTTACTGCTTGAACTTTGGAAAGCAGACAGGTGTAGGAGGCAGGCTCAATTCCTTTAGACCCACT---CTCCAGTTTTATCCCCGTGACCAGAAGGAGAAGCATGTGCTGACCTGCCATGCCAGCGGCCGTGTGTACTGCTCCAACTGCGGCTCTGC-GGCGGTGGGC---TGCCAGAGGCTGGCTGAGCCACCGAGCGCCCGCTCGGGCTGGCG-------------GCCCCGAATCCGGGCAGTGCTGCCGCACAACGCGGCCTACGAGCTCGACCGTGGCTCCCGCCTCTTGGATGCCATCATCCCCTGCTTGGGACCCGACCGCACTTGCATGCGGCCGGTGGTCCTGCGGGGGGTGACGGTCAGGCAGCTCCTGTATTTAACTTTGC-----------------------------------GGACAGAGGCC---------AGAGCCGTTTGCTCCA------------------------TCTGTCAG-------CAACGCCAAGCTCCAGAGGACGCCCGCGACGAG-------CCTCACCTGTTCTCCTCCTGTTTAGAGGTAGAATTGCCACC-------TGGTGAGCGGTGTGCGGGCTGCCGTCTCTATCAGACGCGTTATGGCACGCCGGCTGCCCAAGCCCACCCTCCAGGGGAGGCTGGAGGCGGATTTTCCAGACAGTCCCCTGCTTCCTAAATTTCAAGAGCTGAACCAGAATAATCTCCCCAATGATGTTTTTCGGGAGGCTCAAAGAAGTTACCTGGTATTTCTGACATCCCAGTTCTGCTACGAAGAGTACGTGCAGAGGACTTTTGGGGTGCCTCGGCGCCAACGCGCCATAGACAAGAGGCAG
s NC_004367.genome 40579 1577 - 149696 CACTGGT--TGGCAATGGGGTTTCTGCTCTGTGCAATGTATTTCTGCTGGTTTATTTTTTAACTGTACGTGAGTTATTGCCGGCGTTTTCTGATGAAATCATGGCCTGGATTTACCTAACTTTTCCATACTGCGAGGGAACAAGGTCTGTTTCACGAGGTTACAGATCCCACATAAGGAAATTTTT-----TTGTG---AAGCGTTACACAGGGCAAATTATGACCCCCCTCTTATCAAAATTGATGGGAAAA-------CAGTGGAGAGATATTTTTCCTGGAAGAATCGTGTTCCCGGCTTAGACCAGTTTAGCTTCGTGCCTGTCCCGGCCATCAATGATTCGGATAGA---AGTCGGACCTTGCCAGGCTATACTGCTATGGGAG--GAGATGAAGCTGCACA------------------------TGATGATGCT---GCCCTCCGCGCCT---TGCAGGGACATGCTTCAACTGTTTGTTGTGGTAACCCTGTACAGTGGATGTGGTTTAGGCTTCTGGCTGCATCCTGTTGCCGCTCTCGCCATTGTTTGCTGCCTGTGCCCATTG------------------GAACGGGTCGTGGCAAGGGGACGTGTAGTATTGGAGATGTGTGGGCCTGCTCTAACGAAAACGCGGAACTACTGAGTGATGTCTTTTCTGCAGTTGTGTCCCGTGCTACACTGTCTTGCATACTCGACATTCCACCAGTCGGTCCTTATGCTTTGAAGTGTTTTAGGGGCC--TTTTGAAGCACAATGT---GCCCAGA-------------GCTTGTTTTTGTTTGGATTGTGGTTACTGCTTAAACTTTGGAAAGTCCACCCG-------GTCATCTTCTA--CCTTTAAGCCCAGTAGTTATCACTTTTATCCACGTGACCAAAAGGAAAAACATACGCTAGTGTGCAACTCTAGTGGGCGTGTGTATTGTTCTAACTGTGGCTCTGCTGACCTTGGGTCTATTCC----TCTTGTTGAGCCCCCTAGTG-------GGGAGGGTGTGTGGGGGGCTTGGCCAAGAATTAGGGCAGTACTGCCCCATAATGCGGCCTATGACTTCAGACAAATGGATCGACCTTTAGACGTTGTTGTCCCATGTCTGGGGGGCGCCCGCACTTGTGCCCGTCCAACGCTGGTCAGGGGAATGACTATAAGGCACCTCTTGTATTTAACGCTGCCTGACTCCCTCGATAAGCCACGTTGTTTTGTGTGTGCACAAAAAACCTGGTCTAGAGAGGTGTCTGTCACAACACAAAGGCCTGACGGTGAATGCTCTGTAAAGGGTTTTGAAGATCAAGCGCTTCCAGACGAACAGGACGCGATAGATACCGAATCTATTTTCC-CCTGTTTCAGAATAAAATCTCATCCCAGACTTTGGTGTGCCGGGTGCAGGTTGT--TTACTGCCAGATATG-GACGGCA-GACGTCCACCTCGTCCGAATGTGCAAAGTAGGCTAGAGGCAGATTTTCCCAATCACCACTTACAAACCAAATTCATGGAATTGGTTCAAGGTAACCTTAGCGACAAGGAATACCGTGAGGCTCAAGCCGGATATCTGACATTCCTTATCGCCGAACATTGTTACGAAAACTACGTGCAGCGGATGCACGGTGTACTTCGAAGGCAA-GTGGCTCAGGCTAGACGCGG

a score=5213.0
s NC_007605.genome 49774 331 + 171823 TTTATTAATAAA---CAATTACAGATACAAAAACTTGAGTCTCTCGAGGTCTGCGATGAGGCGGTGGGTGGAACGCTCCAGCTTGCGGCGAAGCTGGCTCACGAAGCGAGACAGTACTCGGCTAGCCTGACTAAGGGTGAGG-------CTATAACGCAGGTCCTGTTCCGGGGCGGCGGTGGATAGAGAGGAGGGGGATCCGGAGGGGACCACTAGGTCGCCGGAGGTCGACCCTCCTGTCACCACCTCCCTGATAATGTCTTCAATAGACAGAAATTGGGTGACCACTGAGGGAGTGTTCCACA--------GTAATGTTGTCTG----GTCGCTAGATGGCGCGGGTGAG
s NC_004367.genome 42387 340 - 149696 TTTATTAATAAAAGTTAATTACATATACAAAAACTTAAGTCTGTTTATGTTATTGACTAGGTCTTTACTGATCCGTCTGAGTTTCTCACGTAATTGTGCTATAAATGTTAGCAGCACATCTCTAGCCTGGCCTAGAGTGAGAGAGAATCCAAGATCGGTGGTGATATCTGTGCGGCGCAGTGCAC----------GGGATACCGGGGAAACTAGTGAATGT---GGGGATGAATTTGCGGAAAGTACGTTCCTAATAATTTCTTCTATGGTGAGAAAATTGGTTACCAGCGATGGAGTGTTCCACATTGTCAGGGTGTAGTTTTCTGAAAAGCCACTAGATGGTGATTGTGGG

a score=1895.0
s NC_007605.genome 50788 36 + 171823 TTTCTTCTCCCGTTGCATGATAGAATGGCCATAGGG
s NC_004367.genome 43392 36 - 149696 TTTTTTCTCGCGTTGACCAATGGAATGGCTGTAGAG

a score=29852.0
s NC_007605.genome 51605 2159 + 171823 TTGAGTACATCGGTCGGCCATCGTGAGGCCCCGGCCGCGTTAAAGTAGAACTGCACGTCCGGCAGATTGTGCCGATAGGTG----------------AAACACTTCCAGATGATGTTTTTTCTGTTGGCCAGGATGGCCACGGTGGGGGGCCTGGC----------CTCCTTAGGTTTGGCGGCCCTGGCCTCGGTGAGAAGCTCGCGTAGCCACACGGCCTGGCGTGCAAAGATGGACATCTCTGGCTCGAAAGACTCGGAGTAGCCGTCCAGGTCCTGCAGAAAATTCAGCGAGATGGTCTCCACCAGGGACCGGAAGGGCTCAGAGTGCCCGTCGCAGTAGAGGAGGGGAGCAACGACCCTGACCTGTCCCAGGGTCTTCAGGTTAAACAGATATTGAGAGGAGACAAAGAGAGTTAGGGGCCGA---CCGAGGAAGGCCGCCGCCACGGCCGCCTCAAAAACGGAGACGG------------GGATGGTGTCACCGGAGCCCCTCTTAGGACCGGTAATGGGAGTGCCATAAGGCATAAGATTTCTCAGGGCCCGGCCGGTAACGGTGCCGTAGGAAGACGGGGTTTCGCGGGGGACCTCGAGTCCCTCCGCCCTGGGGAGCTCTTCTCCGCGTGTATAGGCCTGCTTCACAAAGTCGCGCAGGTAGTCCTGAAATGCGACCGGGCCCTCC------AGCGGGCGCAATGAGTGCCAGAGCTGCTGAAGGGCCTCGGGGGCGAAGCACCGGCGTGCGAGGAGCAGCATGCAGGCTCGGGCGCGGGCCGTACTTTGGTTGTGGACCAGGCCCAAGAACTCGGGGTGCGGCCAGAGGGCGGCTCGGGTATCCATCTCCTCCCAGGCGTCCTGGAAGAAGATGAAGCCGGTGGGTGGACCGGCGATGC-----GGTGGCGGGTGAGGCGGCGCGCGTCTTCCCCGTCGTTGCTGCCGCGGGTGGTTGAGGGCATGCCCCCCCTCCCGGAGGCTGGACTCCTGACCAG----CCTGTAGGTGAGGACCGAGTCCGACAGGAGGTCTCCCAAACCCCCATCTCTCGCTAGAGCCGAGACCAGGCCGAGTC--CTGCGTAGAAC-------GATGGGGCGCCCAGGAAGGCGGC---AGCGTAGGCCGGATGTGTGCCGACCAGCAGCGCCATCATCTCCCGTTGTTCCAATAGAATAACTTCCCGGTC------TGTGGCC---GGGGCTGGATAAGGGGGGTGATTCCTAGAGGCGATGAGACTGGCGTGCGCTAAAAGTGTCATGGCCACAATGGGGTTGTCTGCCAGGTCTTCCATCAGGGCTTTGGGCGCAGAGACGTATTCCCGAAGCAGCTCCCCGGCGTTGGACTCCACGTCGGGCCAGGTGTCCCAGTAGGAGTCGGCGGCGGCGGCGCTGAGGCGGGCGGAAGCTACACTGGCCAGGGT----TCTTCTCCTCCTCTCTTGGTCATCCTGCGGGGGACCA---ATAGCTTGGGGGCGTCCG-GCTGGGGTCAGGGAAAAGGCCTCTGGGTTCTCCAGCACGGTGGGCATGACATATTCCAGAAAGTTGTGGTAGACGGGGATGTAGTTGAGCGGCTCCTGGGTGTCTGCGGAGACGTAGGCCGGGTTAAGGGGGTCGCAGGGAGACTCTGTTTCCAGCCAGAGGGTGCCGGCGTATTTCGCCGGCCCTGCCGCCGCCAGAAATTGTGCCCGCCGGGTCGGGGCTCCATTGCCCCATCCAGTT---GGTGGTGCCGAAATCGTGATGAGGAGGGGCAGGTTGTTGGTCAAGGGATGCTTAACGAAAACGGTAGGCTGGGCGGTCTCGTAAAAAGCCAGGAAACTCTGCTTGGCCGAGGCATAGCGCAGCAGCTTGTCCTTGA------GGAGGGCATACTGGGAGCCAGCCGAGGCCCCAAGCGCCAGGCCCCTGGCAGCCTCCACCACGATCTT--GAGCTGGCGCGGGTCGGTGTGGCCCCTGGCCTGGGTGA------CCAGATCCTGCAGCGTTCCCTGCAGCTGGGACTCTTCCTGGGCCTCCTGGATGATGGCCTCCAGTCGGGAGAGGCGCCTTTTCCAGTCTGCGACGGTCTCCTTGCCCCCCGCGACCCGCTTGGGGTCCAACGTGGCCAGAGCCAACCTCAGCTCCTCCATGCCATCCATGGAGTTCTGGGCCATGCCCTCGACTTCCAGGAGCCGTGTTAGCTCATGAATTTCACCGTCAGCCGCAGCGGCTAGGTTCAGCCA
s NC_004367.genome 43981 2132 - 149696 TTGGGTAAATTTAGAGGCCATTGGAAGAATCCGTCTGCCTGAGGGTTAA--TGCTTAGATGGGGGATGTTACC--TAGGTGCACATTTTTTGGAATAAAACACTTCCAAATCACGTTGTTCCGGTCTACCATCAAAGCCA--GTGTAGGGTTTGGGGAAGAAAAGGCTTTTTTGTTTT-----------CTTCTGCCAAGTATTGCCGCAGCCATAAGGCCTGTCGCATGAAAACTGCCAACTCTGGTGGATGGGATTCTACATAGCCTTTTATGTGGCTAGCAAAATCACGCGACACGGCTTTTCCTATTGACTTGAAAGGCTCAATCTCCCTGTCGCAGTAAAGGAGTGGAGCTGCCACGCGCACCTGACCCAAATTCTTTAAGTTAAACAG---TGGGTTGGAAATTGAGAGTAATGTGATCTTTGTTCCAAAAAAGGCAGCTCCCACAGCCAACTCAAACGCAGAGACTTCTGAATTAAATTGATTTATGTGTGAGGATCTACGGGCGGGTCCGGTAGTTGGTGCTCCATAGGAGACTAGACTGCGCACGGCTGAGCCCGTTACAGCGCCATAGGGACTGCTAGTGTCTGGCAGCACTTTTATTTCTTCAACCTGTGGAAGGGTAGCCTCGTGTAAGTAGGCGTGTGAGACAAACATGGCCAGGAATTCCCCAAAATCCTCGTGGTGTCCTTTGCTTAGGGGACGCAGTGAGGCCCATAGCTGACAGAGTGCTTCGTGGGCGAAGCATTTCTGTGCCAACAGCAACAAACAGGCTCTCGCCCTTAAGGCATCTCTGTTGTGCACAAGGCCTAAAATCTCAGGCCGTCCCCAAAAGTACGATGTGTAATCAACCTCTTCCCAGTTTTCAGGAAAAAATATGAATCTGCC------ACCATCGGTGCCGGTCAGTGGTTTTTGAGAC--------------CAATTTACGCTGCTGTGTG------------------------CGTAGGGTGGAGGGTCGGCCAGAGATTCTG-GGGTTAGTACATAGTCTGACAGG------------------TTGATGGTCAGGTCAGAAATTGGACCACATATGCTGTGCAGTGCTTCCACAAAGGAATCAGCTGTTAAAGCGGCCTCAACAATCGCTGGACTTAGGCTAGCGACCAATGTTATCCACTCGCGTTGATTTAAGAAAATAACATTACGGTCCCATCCTTTGGCCTTTGGCGATAGATGGG-----------CTACGCAAAGTGAAGCTG-CATGTGAAAACAGGGTCATAGATACCATTGGATTACCCGCCATAGACTCACACAATAACTCGGGCACCGATGTATATTCCTCCAGTAAACGTGTAGCATTGGTGCGAATGTCGGGCCAGGCTTCCCATACGGCATCTGCGGTTGCCACGTGGAGACGTGCGGAAACCACACTGGCAAGTGTGCAGTCGTCTCTGCCGGTGTATGTT-------GGGGAACCATTTATAGCT----GGCGCTAGAGCTCGGCTAAGTGTAAAGGCTTTGGGGTCTGCTAACACGAATGGCACTGAATATTCCACAAAATTATAAAAAATGGGTATATAGTTAAGTGGCTCATGGGTTTCAGAGGTCACGTAGGCTGGATTTAAAGGGTCGCAGGGGGAAATAGTTTCTAGCCATAATACTCCTGCGTACTTACTAGGTCCGGAGGCTGAAAGAAATTGAACC--CTGGAGTAGGAGACCATTG----AACCGGGTGAAGATGTTACCTGCGTCGCCGC------ATCTACATTGTTGTCTAGAGGGAATGTGACAAAAATGGCTGGTTGGAGGGTCTCATAGAAAGATAGGAAATACTTCTTGGCTGTGGCATATCTGAGTAACCTGTTTCTAATTGTTTTTATCTCAT-CTAGGGATGAGC--GGTTCCCTATCTGCAGCTCTTTTGTTTTGTCTATAACTGTTTGAAGAATTTGCGTAATTAAAT--------TGGTTTGAGCCATATATGTCAAATTCTGTAGAGTGGCATTAAGATCAGTTTCCTCTTTCGCCTCAGAGACAATTTCTTCAATATTTTGTATACGACGGTTCCACTCTGACACAGTTTCCTTCCCACCAGTAACCCGATTGTGATTGAGAGTAGACACTGCCAATTTGAGTTCATCAATGCCATCCATATTGTTATTTGCTAGGCTTTCAAGTGCCAGAAGGGGTTCCAGACTCAAGACTTCACTTGTGGCTGCCGTGGCTAAATCCACCCA

a score=26249.0
s NC_007605.genome 54963 2298 + 171823 CCTTGTCTTCCTGTTCTCGGAGCTTCTCCTTTTCCTTGCGCCCGGTCTCCATAAGCTGC-CGCAGCTTCTTCTCATACTGTCGCTTGAGCTCTTTGTTGGGGGCAGTGTCCAGAAAGGCCTCGAGCTGTTCCTCGGTGGCGGGCTTAAAGCCTTCGGCCTC---CAGGCGCCAGGCCTGCACCTCCTTCTGTCTG---AGCTGATCGTTGTTGTTATTCTTCAATTTCTGCAGGTAACTTAGGAAGCGTTTCTTGAGCTT--CCCTGGGATGAGCGTTTGGGAGAGCTGATTCTGCAGCCC---AGAGA---GTAGTCTCAGGGCATCCTCTGGAGCCTGACCTGTGATCG--TCGCATCATAGACCGCCAGTAGACCTGGGAGCAGATTCACCGCCGCGGCCGTCTCCTTTAAGGTGCTGTGAGTAGCAAAATTCTGCAAGGCCACTAGGCGCGCTGGCTCCAGCGTCAGCCGGTTGCCCATCTCGAATGTGTGCAGGGCCTCTGAGACCATGGGGTCCAGGATGCGGTCAATGCCATCCTGCACCTCAGGGTCAAGGACCGGCAAGTCACGATAGAGGTGGTCTATGCTCTCCTCGAAGGAGGCAATGTAGTTATCGATGGTGTAGAAGGTGATGGATTTCAGGATGTTCATCAGGTACTTTTTGGAGCGAACAATCTGCTGTATAGTGTCACGTAGGCGGATGTACGTGGGGTTCTTTGCGGCCCCGACTATCGACCCTGCATTTGCGATGTACTTTTCTATGACGGGGATGGTGAGGGCCGCGGTGTCGGCCAGCGGTGGCGTGGCTTCGGGGTTG--------TCGTGGTTGGCG-----------GGTGTCGCAGAGGG-------------------------------AGAGGCGGGA----GAGATGGGGGCGCCTGGGGCCGAGGC-----CACACCGGCCAGGCCCAACATTGCCTCGATGTCGTCCAGGATGGTGCGGAG---GCGC---TTTTCGTTTTCTCTGG--TGGTCTCGAGCTCCTTCTGTTTTTTCGCGACTGTCTCAAACTCTGGAAGGGGGGCAATGCTGGGGTCGTCCTCCTCAACTCGCTCCAGGGGCCAGGGGATACCGCTCATATCACTAAGGGCGGTGCCCAGGTAGAGGAGCTCGCGATAGTCCCATTCAATGGACGTGTACCGGATGTTTAGGAGAGGCAGGGAGGCGATGATCTGGCATGTGTGCCGCAGGTGTGTCAGGAGGTCGTCAAAATCCATCACTGTTGGGAGGCTTGGGTCCTCAAGGTAGGAGAGATAATCGGAGGCCGCCGAGGCCACCTTGTCCCTGATGTCCGCCGTACACCTGCGCACGT-GCAGGGCCGCATTCTTGGACCGGACGGCCACGTTGTGGACAAAGGGGGGCACTGAGGCGGCGGG---AGGGGCCCCATACTCTATCGCTGTCAACAGCGCCAAAAAGCGGACGTCCTCCTCATCTACCCCAGCCTGTTGTCTGGCCACGGCCGTTCGGGCGGCCTCCGCCAGGGATAGGAGGCGCTT----------CCAGCTTTCGTCGTCCAGGACCAAGGGGACGTCCACGTGCGGGCCCCTGTAGATGGAATTATCCTCGGGTTCTCCTCCTCCTTCCCCCGCCTCCTGATCTCCGCCCGAGAGCAGGTCGGTCAGGCGTCTGCGGGCCGCCTCCAGGTCAAATTTTCCATCG--TCGCTCTCGGCCAGCTGGGGAATTTCAGCCAGCATCTTAGCACCGGCATCTACACGGACCGCGTCCTT-----------CGTGGCCAGGGACGGCAGGCAGGCCTCCAGCTTTGCGGCCAGGTGCTTATGGAACTCTCCCGCTCTTCCCTTGTTTTCTGATAGCATGTTTGCGAGGTTTT--GGATGTTAAGTTCGGAAGTGAGCAGTTGCTCCAGGTCCAGCGTGGGGACCTGCAGATGTCCCGACCAGT-------CCTTTAAGAATTCCAGCAGATTTAGCACAGACGATCGGTCCCTACTCCTT---ATTAGCCCCTGCTCGAGGACCACTGTCACAAGAAGATAGTCTATCATGCTCAAGGCATCTGCCTCTGGCACTTCCCGGTTAGAGGCCGGGTCGTAGACGATGGCCTGTTCCTGGTAGGTATGTCCGG--CTATTCTCGCAATGTTGCTCTCGAGGGGCACAAAGTCC--ATCTCAGGAGTCTCTATGTCAAAGGTGGTCTGATAGTA---------TTGGCTCCTGGCGGTGTCCAGTGTGATGGGGGACGTGGGGGCACTGGATCCCGATTCCAGGCTGTTGGAGA-ACACTTCATCTTCGAACATGTCTTC--ATCCTCTGTGGTGGGGATATCGGAGGCTAAGTCGCTCTCCG---------CTTCTTCAGAGTCGGACATGGATAGGAAAGGCTCCTCTAGGTCAGACA
s NC_004367.genome 47294 2313 - 149696 CCTTGGCTTCTTGTGCATCCCGCCTTTGTTTTTCTTTTCTCTTTGCCTCTA-AAGATGCATGGAATTTCTTTCCATATGTTTTCTTGAGTTTGTCGGATGGAGCTGTTGCTAATAAGGTATTGACTTCTTCCATAGATGAAGGGTCAAAGGCATCTGCCCTTCTCAGCCACTCGGTCT------CCTTTTGTTTCTCCAATTGACTTTCTGTTTCGTTTTTCATTTTTTGCAGGAGTGCGAAAAGCCGCCTCTTGATCTTTCCCCTAAGAACAGCCCTCGACACATTTCGCTGAACACCTCTCAAGAGATCAGAAGCCTTAAG--------TGGATTTTGACCGC--ATCGAACTGCATCGTAAGCCGCGAGGACACTTGGGAGAAGATTGACGGCTGACACATTTTCTTTGCGGGTACTGTTTGTCGCATAGTTTTGAAGGGCGGCGAGTCTGGCGGGTTCCAGACTTACCCTGTTACCGGTCTCAAACATTCTAATTGCTTCATCTATCATGGGTGGGAGGGCTTCATCTATCGCATCTTGAATTTCAGGGTCTAAACGTGGCAGGCCTTTTTTGAGGTGGGATAAGTTTTCCTCTATTGAAGCTATAAAGTTATCGACAGTGTGAAAAGAAATCGACTCTAGAATTGAAAGCAGATATTCCCTGGAGTGAACAATTTGCTGGATTCTGTCCCTAAGACTTATATAACGGGGGTTCTCATTGGCGCCCACTATTGCTCCGGCGTTGGCAATGTAGCGTTCCATCACTTGTATAGTCATGGCCGCTGCCT-GGCCAGTTG-GTTGTTGGTCCGGTGGTGAGCCATCATCTTGATTAGAGATTGTGCCTTCGGTGCCTCCAGGCGCTTCTTGTACCTCCGGCTGATCTACATTATCAGATGAGGCATTACTGGAAGAGGGCGGCGGAGGAAGGGGAATAGGAATTCCAGCCATGCCCATCATGGCTTGTATATCATCCAGGATTATGACGAGCCTGCGCTGATCTTCATTTGTTTTGGACTGGTC---AGC-----CTGCTTTTTCCTAACCGTATCAAACTCTGGTATAATTGTGATTCCGGGTTCATCCTCCTCCACGCGTGACATGGACCATGGAAGACCACTGATGCTACTCATGGCCGTTCCTAGATACAAAAGCTGGTTGATATCTTCCTGGATATTTGGATATTCTAAATTTAGGGTTGGAACAGCTTGTAGGGTTTTAGCTGCGTTTTTCGTGGCCATCAGTAGGTCGTCAAACTCAAGAGCTATTGGCCTCTCAGGATTGTCTAGATAATCAAGGTAGTCAGAGGCCGCCGCGGCGGCCTTCCTGTTGGCGTCTTGTATGTATCTTTTAACGTAGCGGGATAGTATTTTT-GCCTTTTCAGCTACATTGTGAATGAAAGGGGGTGGTAATGATACCAGTTCACCAGAACCAGTTTCCAAAACGGTGAGCATACCCAGGAATACCACATATTCCTCATCAACCGTTGCATGCTGTGCTTCTATAGCT----------CCCCTGGCCCGTATAGATTGCTGTTGGATGATGGACCATGTCTGTGTGTCGATGGCTAGGAGTGTGTCTC--TACCGGTTTCTGACGAAGGA----------------------TCTTGCACCCTGTCCAAACTTGGATCCGACGCCAACGCGGTTATTTTGGCTCTGGCAGCTGCTATGTCATATTTCCCATTGGTTGCCTCTAGTTCA--TAGGAAATGTCTTCGAGAAACTTAAT-----------CACTGCCTGAGTTCTTGGAACCGTTTCTGTAATGAGTGAGGGAATACAGGCTTCAAGTTTGGCCGATAGATGCCCGCGTAGCTCTGCTGTTTGCAGCGCGTTTTCTGATAGAGCAGCGGCGATGTTTTCCAGATG-TAAGTCCGT-ATTCAGCAGAGTTTCTAGATCTTTATAAGGGATGAAAAGCT-TCTTAGCCAGGGATAACAAATGTGAAAGT---AATGGCTTTGCTGCAGAT------TCATTGCGTTTTACAATTACACCTTGTTCTATAACAGTAGTAATAAGAATGTGGTCTATCGTTAACAGGGCTTCGGCTTCGGGAACTTCCCTGTAGGATATTGGGTCATACACAATGGCT--TTACTTGTTGCTTTGTGCGAGTCTATAATTTTGATTGAATCTTCTAAGGGGCTAAAGTCCAAATCCCAGGTGCCATCA--TCAAACGTAGTCTGGTAGTAGTTTGTTCGCTGACTCTT-----TATAAAGCTTGGTGA-----------------------AATTGCAGCGTGTTCTATAGACGATTC---------CGTGTCTTCTGATGCACTGTCAT---GATTTCGAAA--TAGCCCGTCCATTGAATCCAGTTCTTCATCAGAATCAGACATCGAAAGAAAAGGTTCATCTGCATCTGATA

a score=3377.0
s NC_007605.genome 57786 217 + 171823 CTGGCGCGGGGTGGGGTGTCGGGGAGGCGGGTGGTGATTGGT--GAGGGATGGGGATTACTGGAGGGGGAAGGCGAGCTGCTGAAGGGGGGCGA--TGGGGCGGAACGTGGGTGCGTGGCAGCTGATCATCC---TCTGTGTCAGTGGTGGAGGACAGAGGGAGGCGGCGGCCGGAGGTGGGCTTCTTGTGGGGGCTATCTTTGCCCAATCCCTTTTTCCTCTT
s NC_004367.genome 49644 204 - 149696 CTGGGGAGGAGGGGTGGGCTGGGGAGGAGGGGTGGGCTGGGGAGGAGGGGTGGG-----CTGGGGAGGAGGGGTGGGCTGGGGAGGAGGGGTGGGCTGGGGAGGAGTAGGAGT------CAGCCTAATTTCCATTTCTGACTCCGAATCTGAAGA-AGATAAA--------CCATAAATGCGTTTCTTATTAGGAACATCTTTCCCCTTAGTCTTTTTCCTTTT

a score=23279.0
s NC_007605.genome 58434 688 + 171823 CCAGGTCAAAGCCGCTGCCGTTGGCCTCATAAAAGTCATACACGCCATAGTGTTCCAGCATAAAGATGCGGGGGTCCTCTGTCTCAAAGGCCTCGGGTAGAAAATAGAGATGCACGCAAGTGTACTGGGCCCCTGGTGCCCCCACGTACTGCAGGATGTCGTGCGCATAGGTGCTGACTCTGACATGGGCGGGGGTGCCCGGGGCCGCATCCTTCTGGCAGTGGGGGTCAAACAAGTAGAAGGAGCCATCTGTCTCGATGATGATGGCCCCCGCGTAGATGTCGCAGATGTAGAGGATGAACTGGGCCACCCCGTTGTAACTGCCGTGCAGGACCTCGGCCAGGGACTGAACAACTGCCGAGTTTGCGATCTGGGCAGGGAATAGGACGAGGCCAAAGATCTCCGCCGAGCGGTATATGTGCACGCG-CCCACCGCCCCTCAGGACCACG-------GAGCTGGGCACGTCCGTCAACTGGGCCATCTCGTGCCCCTTGAGGATGCCGCTCTGGCGCATGAGGGCATCCAGCCGCGCCCCCTCGTCCAGGACCTCGTCCAGCTCAGGGCGGGAGGTCAGGGGGCGGCCGGCCAGGAAGCTCTTGACCAGGTAGAGGACGCAGTTGCTGACGCACTGGATGCCGGCAAAGCGGCCAAACTTGCAGTGGGCCTGGTTGCACGAGGCCGTGCCTAGGAT
s NC_004367.genome 50090 691 - 149696 CTAGGTTAAAGTTGTGGCCGTTACCATGCTCAAAGTTATAGATGCCATAATGCTCCAACATAAACTTTCGTGAATCATCAAGCATGAATTCTTCTGGCACAAAATACAGAAAAACACAAGTATACTCTACCCCAGGACCCCCGACGTATTGTAGGATGTCATGAGCATAACGACTAGTTAAAACCTGAGCTGGGCTACCGGGTTGGGCATTTTTGGGGCAGTGAGGATCAAACAGGAAAAATGAGCCATCTGGCTCCACAATAATCGCCCCAGCTAGGGTACTGCAAATGTATATGATAAATTGTGCAACCCCGTTGTAATTTTCATGTAGAATTTCTGCCAGAGAGCGCACAAATGGCGTATCAGTTATCTGTGCTGGAAACAGTACCAGACCAAATATTTCGGGCGAGCGGAAGATATTAGTCTGACCCACGGGT-----GGATCAAGTGTAATCGCACTCGGCACATCTGTTAATTGAGCCATTTGCCGCCCCCTAAGCACCCCGCTTTGTCTCATTAGACTATCCAGGCGTGTCCCGGCATCCAGTACATCATCCAGTTCTTTTTTGGCAATCAATGGATGCCCTGCCAGAAAACTCTTTAACAGGTACACCACACAATTGCTGACACATTGAATTCCCGCGTATCGGCCAAACTTTGGATTTGATTGATTGCTGGTTGCGGTGCCAATAAT

a score=34595.0
s NC_007605.genome 60081 2749 + 171823 ACTATGGCCTCGGCACGCTCGGCGTCGATGGCGGGTGGCTGGAACAGGCGGGCGAATGTGTAATCCCGGAACCGGTAGGCGACGC-TGCGCCTGAGGGCGCCCGTCAGGCTGTATCCCAGCTCCAGGGCGTGCTCCACCCGCTCGTTGAGCTCCTCGAGATCCGGACGCAGGGGCTCGCTGGTGTGGGCC--------CAGAGGGGGTGATCCGCGATGCCCCGGCTCTCCCTGAGGGCCGGCACCAGGAGGCGCCTTCTGAGGGTGGCCGTGTCGGCCGTGGCCAGGGCCC-ACCTGGCGGCG----GCGTCCCGGCACACATCCTGGATGCCCTCCACGACGCTCTTTAGCGTCTGGAGGTCCGTGGAG-TAGTGGCGGGGGGAGGATGAAACGCTCTTTTCCTTCACCGCTACCACCGCCTCCTCCTCCTCTTCCGTCGCCAGAGGGATCTGCACCCTCCCGGTCTCTGCGTCGTACAGGAGCGGGCGGGAGCACAGCCTCCAAGCTGCCCCCGTCAAGCGCGAGATGTCCTCCGAGAGGGTCTCACCCGAGACCAGAAAGCGGCGGGTGGCCAGGCCCAACGACTCCGCCGTCGTGCTGTATCTCAGGGTGAAGAGGAGTGAAAAGAGGGAGGTGGGCCAGGCAAGCGGTGGTGCTTCCGCCGCCCGCTCTGAA---GCTGAGATAGTCTCGGAGATGATGCCTGAGACCTCTCGGACGGCGTCCATGATCCTAAGGACTGCGTC--GTGGGACGACAGCCCCCAGGGGCCCCCGCCCTCTTCGTCTTCTGCACCCTCGGCTCCTGCGTCCCCGGCCTTGCCTTCCCCCTCTAAGTTGAGGGGGCGCAGTCCGACCGCCTGGGGGGACTCCCCAGGCATCGGAGGGGCCCCGTCATAGATCTCCCAGACGGTGGCGTATATGAGCTCGAGAGGACGGCGGGCCC-----GGGTCAGCTCGGGGGAAGGGAGGGCCAGGTCGCTGCCGAAGGAGACCAGCCAGCGCAGGGCGGCCAGAGAGCGGGTTTTGGGCAGCTCGTTGGAGAGGACCCGGCGAAGGGCGGGCCAGATTTGGAACTCGATGAAGGCGGCCGGGAAGAAGGGGCTGTGGACATAGGCCGGATCCGCGCGCGCCGTTTGGCCGGCCCTCAGGGACCGGCAGTATGCCTCGAC----------GTCTG-----TCCGCGGGGCCGCCGCCACCG---------CTGCCGTCCACTGCCTTCTTCCCTGCTCGCCGGGGAGTAGGGGGGGCTTACAGGGGAGGGCCGGAGCCGGGGCCGGGGCCTGCCACAGGCGGCTGTAGCGGACCCATAGCAGAGACCTGAGGAGTTCGGATGAAAGGTCCCCCGCCACCTGCTCATACTCGGCCGCGGGAGGGGGGACGATGAAGATGCGCAGAGGGGTTACGGCGTCCCAAGGGTCCGCCGCCGCCCCCACACCCACAGCCGTCGCGGCGGGGGCGGCGGCGGGCGTAGAGGGGCCGCTGGTGCGCCGGGCTCGTCTGTCCACGGCCTCGGCCTCCGCCCGCAGGTAGGCCGCCCGGGCCACACGGGCGAAGCGGCTCGTGGGGCTCGCGGTGGGCAGCAGTCGGAAAAAGTGCAGGGCAAAGCCCGATAGACTCTCTAGGAGGGCGGCGGTGGCCTCGAGCCACCTCCACCGCGAGCGGGACACCCGGGGCACAGAGGCCAGCATCATGGCGTAGTCCCCCGCCACGGTCTCGTTGAGCCCGGCCGAGAGCAGAACCGTGGCCACCTGCTCGATGGCGGCTGGAGAGAAGGA-TGCCCGGCTCCCCGCCGCCTCCTGCACACGAGCGGCCAGGGCCTCCATCTCTGCCGCCATCCCGGCCAGGAAGGCCTCGATGACCGAGTCT---GGGACGCCGTAAGTCTGGTCCCAGAGCAGGGCCTCGTACACATAGTCGTAAAAGAGGGCCCCTGAGGGCTCCAAAAGCCGGAGCCGGGCGGCGTCAAAGGCCAGGACGGGCACAGC---CGCGACGGGGGGCGTTTGTCCCCCGCTGGCCTCCGCGTACACGCCCAGGATCTCTACCGCCCGCCGCCGGGCCAGGGGCAGCGAGGCCACCACGCTGGAAAGTGACTCGGGGCGGTGAAAGAGACCACCACCGCTTTCTTCACCCTCTCCCCCGCCGGCCCCGCCCCCACTGTGCTCCACCAGCTCCACGGCCATGGCCTTGATGTCCGCGGCCGTGGGCTGACCCTGCCCTGCAGCCG----CCCAGGGGTAGCGGTTGGTCTCCGCGTATACGGTGACCAGCCATCTCCCCAGCGTCGTTTTCGCCGC----GTTAAAAGCGTAGAATGACAGCCCCTCCCGCGGGAAGGCGTCCCACCGGGCCAGATAAGTGTCGGCCACCAGCTCTTCCACGAAGGCAAAGGTGGCCGTTGGGCCAGAG---ACCGCGAGCACCTCCCCGCTGCCCTCTTCGATGATGCGCCGGTACGCGGCCGCCAGGGCCCGGGTCTCTGCGATGAGCCGAGAGCCGTCCAGCGGATCGTCGGTGGCCGGAGAGGCTGTCGTGGGGGGCAGTGAGGATGCCAGCACGTCCAGGGCCGCCTCCAGATGGCCGAGGCCGAAGCTGCGCCTGGAAAAGGAGGCCGCCCGGAGTAGGTAGTAGGCGTGGTGGCGGAGGACCGCCGCCGGGTAAGCGTGGCCGCTCATGAGGGTGAGAGTATTTAAAAAATCGCGCACCAGCACCGGCTGGGCCAAATCCCCCAGTCCAAAGATCCCCAGCTCCAGAGGCATCAGCGCGCGCAGGCGGGCAGCGGGGTCGT
s NC_004367.genome 51461 2467 - 149696 ACGATATCTTCTGCCTGCTCTACAGTAATGTGTGGCGGGAGAAAAAGCCGTTCAAAATACTTATCCCGCAGATGATAAGCAGCACATGTTCCT-AGAGCTGCAGTCAGGGCGTGACCTATGGCTACCGCTTTTCGAACGGACTCGTCTATTTCCTCTAGATTGGGTCGAAGG--TTCCCTGCCGTAGGACAAGACTGCCAAATTGGATGAGTTATAACTCCCATAGCTTCTCGAAGTGCGGGGATCATT---CGTCTTCGAAGAGT-----TGTGAACTGGGAACAAAGTTCTGCCCAGCGGCTAACCGTGTCCCTGCATTTATCTTGTATGGCTCCCAC---------TAGCGTACGCAA---TGTGGAAATAGTGGTGCTG---------AATGATTTATT-------------------------------GTCGGATGTAATGGGGATCTGGACCTGTTCTGATTCTGCATCGTATTCAATGGGACATGAACACAGAGCGGCTGCAGCACGGGTTATTGGGATGATATCTCTAGTGAGGTCCTGACCAGTGGTGATAAATCTTTGTGTGGATATCTTCATGGTCTCCGACAGGCTACTATATCTGAGTGTAAAGAGAAGGGAAAATAGGCTAGTTGGGAAGGTCA---------CATCCGGTACCACATCTGAAATCGCCAAGAGGGTTTCA---------------------TGGGCAGCATCCAAAATACGGATGATTGAATCAGGTGAGCTAACATC---------------------------TCTG-----TCGGC------------------ATCTTCATCCTCTGAGTG---------------------------------CCCAGGCATGGCTGGAGCGCCATCATAAATTTCCAACATTGCGGCATACATGAGGGCCAGGGGCCTACGTGCCCTTAAGAGTTCAGCTTGGG-----------TTGCGTCTGGACCAAACGCCACCAGCCATCGCAGTAAAGCCTGACTGCGGATTCTAGGAAGCTCATTAGACAATATAAGCCGCAGAGTGGGTATAAGTTGGAATTTGATGAATGCAGCTGGGAAAAATGGACTGATGGCATAAGTGGCATCAGCCTGACTAGTCTGTCCCGCTTTAAGGGAGCGACAGTATTCCTCCACCGCATCTTTGGTCGGATACTTCTGTGTGGTGGCCTCTGTGGGTATGGTTTCTGGGATCAGCTGCCTTGT---------ACCGGTG------GGAGGCTTAT---------CTGGAGGAGGGCTCA---CCTGCCAAAGGCGACTGTACCTGATCCACATGAATGAGCGCATAAGATCAGATGTCATAGCGGCGGCTACTTCCTCATACTCTAAGGTTGGGGGTGATACCAGGAATATCCTAAGTGGGGAAACATTGTTCCAC----------------------------TCGTTGGGTGTGTGGCCATGGCGGG----AAATGTCC----------------------TCAGCTGCCAGAGCTTCAGCCTGTAGGTAAATGGACCTCGCTTCACGAGCGAAGCGGCTGGTTGGACTAGCTGATGTCAGGAGGTCAAAGAAGTGAAGGGCGAATGTTGCAAGTTTTTCCAGTAGTTCTAAGGTTTCCTCTAATCCTACCCACCTACGGCGTGCGCCTTGGGGTGCAGATGATAGGAGTGTTGTGTATGTGCGGGCGGCTTCCTCATTCAAACCGTGAGAAAGTAAAACATCAAGCGTCGCCTCTATAGAGGCGACTGAAAAGTACTGCTTGGA----AGCTGCTGACTGCACATGCGTAGCCAGGCTTTCAAGTTCCACCAAGGAGCCGGCCAGAAA---TTTTGTTACAGCGTCTTCCGGAACTCCGTATGATTGATCCCAGAGTAACGCCTCGAAGATGTAGTCATAAAAAAGAACGCCGGTTGGGCCTAGAGTAGATAGGCAGTCCGCGTCGAAGGCCAATACAGGCACAACATCTGCACTTGGTGGTGTTC--CACCCGATTGC-TCTGCATAGACACCTACAATTTCGGCCGCTCTACGGCGGGCTATCGGAAGGGAAGCAATAACATTCGATAAAGATTCCGGCCGTCTAAAGAGACGGCCGCCGTGCT------------------------------------GCTCCACCAGTTCCCTAGCTAAAACATGAATGTCTTTGACAGT----------CACCTTGATACCGTTGTCCCACGGGTATCTATTTGTTTCCATATACACTATAGTAAGCCACCGTTCCAACA-------CACTACTATTGTTAAAATTAGGAAATTTCAAGCCCTCTCTTGGGAGCGAATCCCAGTAGTTTATATAGGCATCTGCTACCAACTCTTCTACACAAGCGCATGTCGCCACTGGTCCAGGATGCACATTGAGGGGCTCCCGG------GATTCCATGGCTAGCCGGTATTCAGAAATCACACCTCTTATTCCACTTATCAGTTTGTGGCCATCTAATGGGTCATCAGTGTCGG------------TGGAAGGCAATGAAGTTTCCAAGACTCGAAGGGCCTCTTCCAGATCTTTTACAGTGAAGCGCTGGTTTGAGAAAGAGGCCGCCCGGAGTAAAAAGTAAACATGGTGCCTTAAAATTGAAGCGATGTAGCCATTGCCGCTCAGGGACAGGAGAGTATTTAAAAATTCTCGTACTAGTGTGTACGAGGTTAAGTCTCCTAGTCCGAATACACCAAATTCTAGAGGCATCAAGGCCCGAATTCTGGCTGTGTGGTCAT

a score=134872.0
s NC_007605.genome 62999 6928 + 171823 [encoded data, 7170 characters]
s NC_004367.genome 54268 6753 - 149696 [encoded data, 7170 characters]

a score=12903.0
s NC_007605.genome 70453 820 + 171823 TTTATTGATTTAATCCAGGAACAAAAAACAGTCCTAGTGACCCAGTGCCCGGAGAGAGAATGGCCCTGACAAGTCGGCTGCATGATGCACTTCGGCAGTCACGTGTGTGAGTCTCCACGGCCTCTGTCAAAAGGGAGCTTAGCGTGCCAGGGTTGTAATTCTTGATGTAGTGGCCCAGGAATTCAACT-TCATCGTGTCTCCGTCTGCAGTTGGCGTTAATGTAGGCTGGGGCTACTGCCGCATATGCTGCCAAGAGACAGAGGGGCTGCTTCACATATGAGCTGCTCAGGGTCTCCACCACCTTGTTTTGACGGGCCGTGGCACAGGTGATGTAGAAGAGTTGCTTCACAAAGTTGTAGTCTCGCGTGTTAGGAAGGAAGCAGGGTGCCAGCTCTTTGAGCTTGGTCAGGATCACCTTGC-TAAGACTCATGGCGCAG-----GCCAGGAGGATGTCTTCCGCGGGAGCTAGGGGCAGGTCGCCGTGGTAGGTGATCTCCTGGAGCCAAAAGATGGTCTCTTCTAGCATGGCCACCAGGGTGCAGAGCCCCGCGTTCTGGATCGCCTGCATGCGTGCATCCAGCCATGTGTCCTTGTTGGTTGACTTGGTGAAAAACTCACGTAGTGTCTTGTAGCTCC--TGCGCAGCTCGTGTCTGGGTTGCACTTTCTGCCAGGCTCCAATCTCTGGATGGGCGGCCACCGCCAGCATCGACTGTAGGAACGGGTCTTGGATGGGCTCTAGGGTCAGAGAGGCCAGGGGGCTGGGCAAGGTGACAAATGTAATCTTGGAGACAGGCTTAACCAGACTCATGTCAAACCACGGTTT
s NC_004367.genome 61517 817 - 149696 TTTATTCGTCAACACCGGGAATAAAGAAAAGTCCAAGGGATGCACTATTGGGGTTAAGGATTGCTCTTGTTGTACTGCTACAAGTAATACTGAGACAGGAGGACGCGTGTTTCTCAACAGCTTGAGTGAGAGCAGAATTCAGGAGACCGGGCGTGAATTTCTCAATGTAACAGCCGAGAATGTCAATTAGCCTTGTGTTTTT-TACACACCTGGCATTAATAAACCCGGGAACAACGACGGCGTAGGCAGCAATGAGTCCAAGTGGCTGTTTTACAAGCGTACTGCATGCCTTTCTAACAGCGTGATGGTGCCTTACTGTTGCGCATGTTAGATAATGCATGTTCTTCACAAAATTGTAGTCAGTCGTGCATGGCAGAAAACAGGGAGCCAGTTCCCTCAACTTCACAAGTAGAGTTTTACATAAG------GGCTCAACCGGTGCCAATATAATGTCCTCGGCTGGTGC--GAAATAATCCTCGGTTTCACACAA-CAACTTAAGCCACACAATAATCTCCTCCAACATGCCTGTCAGGGCACATAGTCCTGAATTATAGACAGTCTGCCGGCGAGCGTCTATCCATACCTCTTTGTTAGTAGACTCGCGCATAAACTTTTGCAATTCATCAAAGTTCCCTTTGATGGTTTTCATC--GGCTGCACCTTTTGGTAGATGCTTGTGTCAGGAGATGCTGCCATACTTATGACTGCATGAACAAATGGGCCCGGTACGGGTTCTGGGGTTAGGCTTTCAAGAGGCGATGGTAAAATTACAAAACTAAGTCTGGAAACGGGGGCCATTAGACGCCGATCAAACACAGGTTT

a score=64509.0
s NC_007605.genome 72083 3079 + 171823 ACGCTGATGGAGAAATGGGCGGTCGGTTGATTGGCCCCACAGCGACCGGCGAAGCACTGACTCATGAAGGTGACCGTGATGGCCTGTGATGTGTAGTAGAGTACCAGAAACACCCTCACATTCTTGGAGCTGGCCCTGTGGGTATGC------CTCAGGCACGCAAAGTTCCTGCCCCGGGCATGGCACACCTGAACTAAGTTTGGCCCGGTTTGCTCAAACGTGACATGGAGAAACTGGGGGAATTTGTCTTCTGGCACAGCTGTTGCCAGGGTGCTCATGAGCGAGGGCCAGATGCAGGAGCTGACCCAGGCGACGAGATCCAGGCCCAGATGTCCCTCTATCATGGCGCAGACATTCTCCACGGTGGGGGGCAGGGTCTCGCGGGTCCTCTGGATTAGATAGTCACGCCCATCATCCGCGATGTGGTAGCAGAAGGTTTTGGGGGCCGGCCAGCCCACGTGCAGTGAGTGATGTAAGAGGTTTTGAATGTTGAGGGCATTCTTAACATAGCTGTGCTTGTCTTCCTCTTCCGGATGACAGACAAAGAGGCGCAGCTGCCGGCTAAGACCACCGCCCCTGTCCACCTTGTAGGTATGCGGCAGCCGGATGCACCGCCCGGCGTGATACACGCCGCTGTCAAAAAGCGGGGCCCCAATCTCTTTGATCTTGTGACGCATGCGGCGCAGGCAGGCCGTTAGGCCCATGAGCTTCTGCAGCACAGACACAAACCCTTGTACTGCGCTTGTTCCCACAATAGCATGGCCTCTAGGTAGGGGGGTGATGACGCGAAAGCCCAGTTTTCCCGTGCATATGCAAAAGGGGAGCACATCTTCCATATTATCCGGGTCGGCGGGTGGACAAGCTGATTTGAAAAAATAGACTGGGTGGGCCCTGGACACTGGACCCAGGCGGCGCATGAGGCGCAGTACCTCACGCCGCACGGTCCGGCACAGGTCATAGATTTC-------CTCCAGCGACCAGGGGGCCCCCTTGATCTTTAGATCCAGGTCCAAGACCAGGTTGCAGACCGGAAGCCGGGGATTAAAGTATTCATGCCGGGAGACAAAGAGCTGCTCGCTCAGGCTGTTCTGTGAATAGTACACTGGGGTGTAGGAGAGGGCCCTGGTGAGACACGTGTCTGGGAGGCGGCAGTTGGTCGGGGTGGAGACG-ACCTCCGCCAGGTGGGATGAGAAGGGGTCAGCGGCTGTCATTACAAAGTAGTGCCTGTCTGCAAAATGGCAGAGGAAGACCGG-----------TAGCCGCTGC----------ACCCTTCGAAGGACGGTGGGTGGGAGGAATTGTTCCTTGGGATTCCACTGGCCCCGGCAGGTGGCCTGGCCGGCCAAGCATAGAAACCCTTGAAGCGTGGGGGGGTA-TGTGGGACCCTCATCCGCGTGCCAGCGCGCGAGCTCCACCAGCTCCCGGGCCACGTCCACACTGAGCCCGGCCCAGGCCCGCATGAGTCCGTCATCGGGGTCGGGGTCCCACGTGTA-----TGGGGCCG-GGGGCTCCATGCGGATTTTCAGCTGCTGGACACGCACATGCTCAGCCAGGTAAGTCTCCCGGGTGAAGTAGGTGCGCATGTGCTCCGCAAAGCCCCTGTCCAGGAGCGAGGGGAGCA--CGACGCCCCCCGAAGGCAGACACCCAATTTCTCCCATGCTCGTTAACTGAGAGTATCGCTTAAAGGTTCCCTCGTTGAAGCACTGTGCGTGGGCCAAATAGACGTAGCGCACGAGATCGG---CCGAGGCCAGGGGAAGGCGCCCCCTGTAGGCGTCTATCGTCCTTGCCACAGCGCGGATCTCTCGCGAGTCCCGCCGCAGTTTCTCGTGTGCAAAGTGGGCAAAAGCCTCGGTCTGCTCCGCCCATGCCGAGGAGCCAAAGACCTCCCCCAGCTCGGCCAGGGACGTGACGGCGGCCAGGCTCTGACCA-GACTCGGAAG--TAAATAGCTCCGTGAGGTGCGCCAGGGTCTCAATCGTACAAGGAATGCCCCA-----AAAATAGTAAGCAGCCGTGACTAGCACGAACTGGGCCTCGTGGGAGCCAAAGGTGCTAATGAACCACCTGGCCGAGATGTTAACGCGGTAGATGCGGCGCAGACAGCCCACGATCTTGGGACGCAGCCA--------CGCCACGCGGCCTCTGGCATCCCCCTGTGGCTGTTTCTTAGCGCTCAGTGTGAGCAGTTCCACGAGGGGCGTGAGCGAGCGCAGGGCCCCCGCGCGATCTAGGTAG--GTGGATAGACGGTCCGCGGTGAGCGGCGTGAGGCCGCGCAGGAAGGGGAAGGCCTCCTCCGCCGGCAGGTGCAGCGTCAGAACCAGGCCGCAGCGGCTCTGTGA---GGTCAGCCGCTTCTTGGGCAGGTGAAGCTGCAGTTCCACGAGAGAACCCGCCACGTGGTGGAGGGGC------------GAGGCGTTGTGGCACAAACAAAACAGGCGGAAGCCCTCGTCAGGCCGCGAGAGGATGGCATCGAGGATGGCCTCCGCAATGTCAGTGTTTGAGGCCACAAGGGCCTTGATGACGACGGGGGCGGACATTATTTAAGACCGGGAGGCCCCAACGG----CGGGCTAA-ACAGAACGATGGCCTTCTATCTCCCAGACTGGTCGTGCTGCGGGCTCTGGCTCTTTGGCCGGCCCAGGAATAGATACAGCCAGCTCCCTGAGGAGCCGGAGACCTTTGAGTGCCCGGACCGCTGGCGAGCCGAGATAGATCTGGGCCTGCCCCCTGGTGTGCAGGTGGGAGATTTGCTAAGAAATGAGCAGACGATGGGCTCACTGAGACAGGTTTATTTGCTCGCTGTTCAAGCCAATAGCATCACGGATCACCTGAAGCGCTTTGACGCCGTCCGCGTCCCTGAGAGCTGTCGTGGGGTGGTGGAGGCCCAGGTGGCCAAGCTTGAGGCCGTGCGCTCAGTCATCTGGAATACCATGATCTCTCTGGCTGTAAGCGGCATCGAGATGGACGAGAATGGGCTCAAGGCCCTGCTGGACAAACAGGCTGGCGACAGCCTGGCCCTGATGGAGATGGAGAAGGTGGCCACGGCGCTCAAGATGGACGAGACCGGTGCCTGGGCGCAAGAGATCTCGGCCGTTGTCTCATCGGTGAC
s NC_004367.genome 63008 3068 - 149696 ACATTAGTTGAAAAATGGGCGACTGGGCGATTTGAGCCGCACCTGCCAGAAAAACACTGACTCATGAAGGTCACAGTGGTTACCCCGGAGGTGTGGTGCAACACCAGAAATATGCGCACACT------GCTGGCTATGTTGCGATGCTGGTATCTCAGACATTTGAAGTTTTTTCCGCGGGGGTGGCATACCCGGACTATATTGGCCGCTGTTTGTTCGAATGTTACACGCTGAAATTGGGCCAACCTATTGTCTTGGATGGTTGACGTCAGGGTCGTGTATATTGTGGGCCATACCTTCGCTTCCACCCATTGGGACAGTGTTAGGCCCGTACTGGTTTCTATTTTTTCTGCAAAATTCAAGGAAGGGGCTGGAAGGGCATCTTTGACTTTCTTTGTGATAAAGCCTTGCCCTTGGTCTGAAATATGGTAACAAAAGTGAATTGGCCGCGGCCACCCAACGTGCAATGAGTGATGTAGTAGATTTTGTACGTTCAAAGCATTTTCTACATAATACCTCTTGTCATTTACCTTGGGATGGCAGACGAAAAGGCGAAGCTGCCTTGTTAGAACACCACTCTTGTCAACCTTATATGTGTGGGGAAGTCTTATGCATCGTCCTTGGCTGTATATGCCAGCATCAAAAAATGA--TTCCATGCTGGATAGT-TTATGCTTCAACTTCCGCACGCGTGGTGATAGACTGACCAGTTTGCTTAAAACTGCAACAAGACCCTGCATCCCTCGCGTTCCAATAATTGAATAACCTCTAGGTAGGGGTGTAATAACCCGCAAGCCTAGTTTCTCGCGGCAAATGCAGAATGGCAGGATGTCTGCCATATTTTCACAATCTGGAGGTGGGCAGGCTGATTTGAAAAAGTAGACGGGGTGGTCTGATTCTACTGGACCTATACGCGAAAGCATTTGCAGTGAAGCGTGGCGTACAGCGAGGCATAACTGGTAGATATCTGTAACACTCCAC----------ATTTCCACAATCTTCACATCCATGTCCAATACCAAATTACAGACCGGGAGCCTATGGTTAAAGTACTCATGACGAGAGACCAAAGACTGCTCCGCCAGTGTATTCTGTGTATAGTAGTAAGGCTCATAGGTCAGGGATCGAGTTAGCATAATGTCAGGTATGTTGCAGTTTTCTGGTATGGCGATGTGTTTTCTCCAAAACTGACTA-ATGTTGTCAGCAGCTACTGTCATGAAGTAATGATGTTCTAAAAATTGACATCTAAATACCGGCCAGCAGCGTGTTGTCGTTGTTAGGGTTTTAACCTCTACAAGGTCATCACGTGGG-----------TCCGGCACTCCGG-------GGCTAGTTTTCTGGGAGGCTAAACTGAGCATCCCGTGGAGATTGGGGCCATGGTGTGGTGTT----TCACGGTTCCAGTTGGCTAGTTCCATTAAGATCGCCATTACATCCCTACTGAGTCCAGACCAGGCAACAAGTAGCCCGTCGCATGGGTCTGTATCCCATGTGTAAACACTGGGGTGGCAGAGCTT------GACTTTAAGGAGCTTGATTTTAACGTGTTTTTCAAGGTAGCTTTTTTTGTTAAAGTAAGTCCTCATGTATTCACTGAATTTTGAATCTAACATTCTGGTAAGTAGCCCATTAACCCCCAACGCTGAGCTCAAGTGTGGTGC--GCTCGTTAAGACAGAATAGCGTTCAAAAGTGACTCGGTTAAAGCATTGAGCATGTGCAGTGTAAACATACTCTACAAGGCCAGTATCCGAA---AGTGGCAGTTGACCGCGGTACTTATTGATCATGGCTCTTACCCGGCACATTTCCATGGTATCCTTATTGAGCTTTTTTCTTGTAAACGCGGGAAAGTAATCAAGATCCCTAGTCCATTGAGATGTGCCAAAGATCTGGCTAAGTTCCGCGCATGATGTGACCGCCGCTAGACTCTGACCTTGATCCGGGTGGACAAAGAGTTCTGTTAACTGTATTAGTGTTTC-----CACAGAGGCCTCGCTAGGATGAAAATAATAAGCAGTAGTAACCAGGACAAAGGTAGCTTCCCTGCTGCCGAATGTGCTTATGAACCAGCGTGCGGAAGCATTAGTGCGATACATCCGCCTGAGAGCGGATGTAATTTTTGCTCTAAGCCAACAAATGGCGCCGTACAG--------GTCACGTTGGGGATTTTTGTTGCCG---AGTGTCAAAAGTTCTACCAGGGGCTTAAGGGACCTAAGGGCTTTTGTCCTATCGAGGTAGCGACGGGCTGATG--CCGTGTCCATGGGCTTTGTGCCACGTAGAAAGAGCAGGGCTTCTTGGCGCGGTAGCCTTAGTGGGAGAATCTCGCTGCATCG---CTGGGACTTGGTCACTCTTTTGGTCGGCAGACAAAGCCG---------GAGGCTAACCTCTTCAGGGAGATGAGACTGTCTTTCTATAGAGGCATCATGACAGATACAAAATAATGTCGCGCAGTCATTGGGGCGCGAGAGGATAATATCCATCACAACTTCCGCCGTATCCGCATTCGTGCTGAATAGCGCACGGATGACTTCACCGGTTGCCATTATTTAAGA------AGTCTAAACGTGTATAGAGCTAGCAAATAACGATA------TGGCATCCGGATTCACC-TGCTGCGGGTTGTGGCTCTTTGGAAGACACAACAACTCGTACAGTAGGATCATAGACAATGTTGAGGATTTTGAGTGCCCTGACCGATGGCGGGCAGAAATAGACCTCGGATTACCACCTGGTGTGCAGATAGGTGACCTTCTTCGCAACAACCAGAGTATGAACACGTTACGGCAAGTTTATTTGCTAGCTGTGCAATCCAACAGCATCACCGATCATCTAAACAGGTTTGATGCAGTGAGCGTGCCGGAGAGTTGTAAGGGGGTAGTGAATGCTCAAATCACTAAGCTGCAGGCTGTGAGGTCTGTTATATGGAACATGATGATCTCATTGGCTGTGAGTGGTCTGGCCGTCGAGGAGGAAGGATTCAAGGCTCTCCTAGACAAGCAGGCTGGAGATAGTCTGGCACTTATGGAAATGGAAAAGATGGCTACGGCACTAAAGACGGACGATACAGGCGCTTGGGCCCAAGAATTGTCCACATTTTTGGCATCTATGGC

a score=26344.0
s NC_007605.genome 75344 1937 + 171823 AGGTGTCATTGACCCGAGGATCCAAACCCCCT----CCCCTGTCTCCCCTCGAGCGCCTCGCTCAGCCCACTATCACCCATGGCCAGGCTCGGCACCTCCTCGAAGGTGCAGCTGGCCCACCTAAAGAGAGATCTGGGGCCAAGGACCCCCGCGTCACTGTGGGGGCTGTAGAAGGAGGTGAGGTGGTGCTTGTGAAGGTAAACAAGCTGACAGAAGCGCCGGTACTTGTTAAGGAACACGGTCTGGTCACTAAAGTTGGTCAGGCTGACGTCCACCCCACCCCGGCGCCACCTGCAGGGCTTCACTAGAATA-------CCCTGCATGGCCAGGCCCGACCTGCCAAAGATTGTCGGCCTGTGGTGAGGGATAGAAGGGGGGGGCACGGTGAGTGTCACTGAGACGGTCTGATGGGGGAAGAGGGCCAGGTCCTTTGGCAAAGAGACGTCCAGGCCCACGTCCCCGGGGTACTGGGGGTGGTTGATGGGACCCTTGTCCTCCTC-----CATCTGGGGG-GTGGCATATCTGAAGGCAGCCAGGTGGATTTTGAGCTCCGATGGACGCAGCGTGGAGTTGTAGCGCCGCTGATTCTGGAGGATTAGCCGGAGTTCCCCCGTGTAGCCGGGATCGATGATGCCAACATGAGACGTGACCGGACGGGAGGTGCTGCCCCACAGCATGAGCCCATGACCCTCGGGTGGGCGGGCATAGAGGCCTAGGTCCACAGTTGTGGTCTTCATCGGGCGCAGCAGGATGGTGGTCTTGTTGACCAAGGTGAGCCGCCCTACACTAGCCTGCTGGAGCAACAGCTTGTCATTCTGGAAGGCGTAGCGTATGTGTGGACAGGCCTCCATGGTGATGATCTAACAGACAGGGACGGCGGC-----------GCTATATATAAGAGCCCAAGACCCGG----------CTCTCTTTACTGCGAAATGGGGAAGGTCCTAAGAAAGCCGTTT-------GCAAAGGCTGTGCCAC------TGCTCTTCCT-------------------------CGCCGCCACCTGGCTTCTGACC------GGGGTGCTGCCGGCCGGCGCTTCCAGTCCCACAAACGCGGCGGCGGCTTCCCTGACTGAAGCCCAGGACCAGTTCTACTCCTACACATGTAATGCGGACACATTCTCGCCTTCTTTGACCAGCTTTGCCTCCATCTGGGCACTTCTGACGCTTGTCTTAGTCATTATAGCCTCAGCCATCTACCTGATGTACGTCTGCTTTAACAAGTTTGTGAACACGCTGCTGACGGATTAGAT----GGGGATATTTAAAAGGGGCAGCAATCTCGGCTGTTTGTACTTCTTCTCTG--CTCGTTAAACCAATAGCATGTCAGCTCCACGCAAAGTCAGATTGCCTTCTGTTAAGGCTGTTGACATGAGCATGGAAGACATGGCCGCCCGCCTGGCTCGCCTGGAGTCTGAGAATAAGGCTCTGAAGCAACAGGTCCTCAGAGGGGGTGCCTGTGCCTCGTCTACCTCTGTTCCTTCTGCTCCAGTGCCTCCGCCTGAGCCG-------CTTACAGCTCGACAGCGAGAGGTAATGATTACGCAGGCCACGGGCCGTTTGGCGTCTCAGGCTATGAAGAAGATTGAAGACAAGGTTCGGAAATCTGTTGACGGTGTAACTACCCGCAATGAAATGGAAAATATATTGCAAAATCTGACCCTCCGCATTCAAGTATCTATGTTGGGTGCAAAAGGCCAACCCAGCCCTGGTGAGGGAACACGACCACGAGAATCAAACGACCCCAAC-------GCCACCCGACGTGCCCGCTCCCGCTCCCGGGGACGT----------GAAGCAAAGA-----------AAGTGCAAATTTCTGATTAATAAATTTTTATTGACTTTATACATAGGTCTCGGCGTCATCATATGGTGGGGTGGTGTAGGTAT---------GGGATGTAGACAAGTTACGCCTAAAGGCGCAGTCCGCCATGACCAGCAGCAGCAGAAGGGTCAGCACAGCCAGAGAGGCCCACTGCAGTACTA
s NC_004367.genome 66471 1944 - 149696 AGGCATCATTCACCGGAGGAACCAAAGCCTTTGTTACTTCTATCTCTGCC--AGTCCGTGGCGCAGATTTTTG----CAATAAATCGGCTT----CCTCCCTAAAGATACATTTAGCCCAAGTAAACAGAAACTGAGACCCCAGGCAGCGGGTATCACACAATGGATTAAAAAATGATGTAAGATGTTCCTTGTGTAGATAGACTAGTTGACAGCAACGGTCTCCTTCATTCAGAAAAACTGTTTCTGCGCTATAATTAGTAATACAGACATCTGCTCCGTCCCTGCGCCACTTG------GTCACTCTAACAATTAACCCCTTACA-GGCGAGACCTGACCTGCCAAATATCATGGATCTGAAATGGGGAATCTTAGGAGGTGATCCAGACAGCCGTATCGTAATTGTTTGTTGCGGGAAGATGCCAACAAAACTCGGACATGAGACATCAAGTCCCACGTCCTTTTCATACTGGGGCTGATTAATAA------TGCTCCCCTTAGGCACATCTGTTGGTGTGTGGTACTTGAAAGCCGCTAGGTGGACGGTCAGTTCACCGGGCCTCAAGGTGGAATTAACGCTGCGTTTGTTGTGTAAGATGAGTTTGAGCATCCCAGTATAGCCAGGATCAATAATTCCGGTGTGGGGTGTTACGGGTCTGGTTGTAACACCCCACAAAACTAACCCGTGGTTTTCCGGAGGCTTGGCATAGAGACCCAAGTCTAGAATACATGTCTTGAATGGTCTCACCAATATTGCAGTTTTGTTAACTAACGTAAGGCGAGTTG---TGGCTGGCAGAATCAAGAACTTGTCACTTGAAAACGCATAGTTAACGCAAGGTTGCGCTGACATGATTACG---TCAAGGACACGATCTGTGGCTGAAACTAGGTGGCATATATTAGAG----GGACCCGGTCGCATAAATCTTACCAAGCCTTGAAGTTAAGGA----CTAAGAATGGCGACTCACTGGTGCCTCGCTTGTGCCGTCTTGTATTCTCTCCTTGGGAGTACAATGGGCACTAACTCTACACCGACATCC--CTTCTGCCTTTATTGGAGGATCTAACACACGACACA-CCACCTCCAGACAAACAGCCAC----TCCCTATCT----------------TTTATTCATACATGTGTAACGCTGATACATTCTCACCGTCGCTCACAAGCGTTTCCTCAATTTGGGCCATGATGTCAGTTACCTTGGTTATTATAGCCTCCACCCTCTATTTGATGTACGTCTGCTTTAACAAGTTCGTGACTACGATGCTGAATGACTAAGTCCGATAGCCTATTTAACGAGGTGGGTGACAGCGATGTTCAGCATTCCGGCCATGGCCTCATCTAA-----------------------GAAGTCCAA--------GGGTACAGCAGAAGGCATGTCCATGGAAGAACTCGTGACCCGTCTGACCAGACTGGAAATGGAAAACAAGACTCTAAAAAATCAAGT--GAAGAGCAAGTCTCAGAGC----GCTGACCCAATACAATCACCACCAG-GCGGCGGCAGAACCCGAGAAGTCCTAACGGCCCGCCAAAAACAAGTTCTGATAACTCAAGCTATCAGCCGCCTGTCTTCACAAGCCATGCAAAAAATTGAACAGCGTGTCGTGGCAGAAATGGAAGATGTGCGCACCCGAGATGAGGCTGAACAAAAGATACAGTCACTGACTATACGAATACAAGTGTCTATG--AGCTGCA----GCAAATGTGGCACTGGC---------------CCATCATCTACCAACCCAAACCCACGCAGCCAACTCACA-GTCCAAACCCGTACTAGGCACCGTTCAAAGTCACGAGGCCGAGATTAAATCACATCAATGCGAGTCACGCA--AATAAACTTTATTTCAATTTAAACCTCAGTATCAGAGTCATAATTCGTATTGGTAACATACGTGTACTTATGTAGGTATCTAGATGGGAGGCG---AACTGTGCAGTCTACCAACACTATGACTAGAAGTAGTGCAAATACTGACAACGCGGACCACTGGAGTAATA

a score=2547.0
s NC_007605.genome 79112 99 + 171823 CACGGGACTCGTTGATGTGAGAATTCCGCCGCTGGGAACATGGCTCTCGTATCCACTGCAGGTGATGTTAAATTTGTTGTCTCCGGGCAGAACTTGTGA
s NC_004367.genome 69619 99 - 149696 CATTGGGCTTATTGGTGTGAGTATACCACCACTCGCGAAGTTTGGCTTGTCCCCCGAGCAAGTGATAAAAAAGGTATTGCTTCCTGGTGCAATTGGTGA

a score=3516.0
s NC_007605.genome 79548 357 + 171823 ATAGTTAGAGCCAATTCTCCTGCACCAAGGAGCTCCAGTAGAAAGAGATTGGTGGCATTTTCTGAGCCACCAAATGCACCTCGAGGTTGGTAGACAGCCTTCGTATGGGGT----GTCAGCTGGCCAAAGTCAAGATCAA--GTTGATGCTTTTTGCCCCCGACATCGAAATTGATAGTTACATTGACATCTGCCGTGCAAACATTGCATGTGGGGTAAAATGGGAATTCCGGAATCTCAACATTGAAAAAACCAGGATCTTCACCCGTGAGATGGATCAGGCTCTGGATGGTGTACTGACACACAAGCAAGGCTGCCTCCAT--------TGTCTCGGCAC----CGATTTCTAGGCAGCATCCTCTTTAATAG
s NC_004367.genome 70049 372 - 149696 ATAGTAATGGCCATAAGCCCCCCACCTAGGAGCTCCATGACAAACAATCTATCTGCCCCATCCTTTCCACCTGTCACATGTACAGGAGTATAGAT-GCTTTTGTTCTGGTTCACCAACAGTGAGCCAAAGGCAACCTCGACCGTTTCTG-TTTCAGTCCCAGAT-CCAATAATGAATGTCACATTGAGTTTTGGGTCACACGCCCGGCAGTGAGGATAGAAAGGAAAATTTGGCAACTCCACATTTAAAAATCCAGTCTCATCAGATGGTAGATTCACAACACTGTAGTAAACATAGCTACATAGCAATAGTGCGGTCTCCATATTTCACATGAATCAGTACTTTTCAATTAAGAGGTTGCACAGTCTTTAATAG

a score=8994.0
s NC_007605.genome 89174 881 + 171823 ACTGACACATAAACATGGTTTAAGGAATGAACACTCATGGTGTGAGACTGGAACTGTACTAAATTTGCTGACATATGTACAATGAGAGCCAAAAATTTGATAAACCTTAAAAGTCCCCCCATCTAATGATGTCCAGTTCCCTTCTCCCA---CCCTGTACACCCCGACCCAAAGGGACTCAATGGCATTCAGATTTCTAGTTACCACAGGTAGAATATCGGGCGTTGGCCCATAAAAATAAGTGCATGGATATAGCTCTGCACAGGCTTGGAAACACCCATTCCAGGTGTGCTTCTTTTTGGTGAAATAAAAACAGCATCCTTTATATGAAAATGTGTATTCTCTGGTGTTGCAGTATGTACAGTTAGCTTTGGTATAGTTTTGGGGTACCTG-----AAATGTGTGCAGGGTGGGTGTCCAATGTGGCAGTTTTACCTCTTTGTCCCCATACTCCTGCTCGGCCGTCTTGTTAAAGTTAACCGGCGGTGGAGGATCCACCGGCCAGACCTCTACATTTGGTTTGGGTACCCAGGTGATGGCCGCGGCTGCCACCC------------GCCCTCCTCCTCTTACCCTGGGTGGCAAAAAGTATGCCAGGAGTAGAACAATAACAAGTGCGATGGCGGTAAACAATGGC-------ACCCTCACCTGCTTAAATGAAACCATGGCAACCACTTCAAAGAGAGCCGACAGGA------AGATATTTATTAATATTCCATTAGTAAACGAGGCGTGAAGCA-GGCGTGGTTTCAATAACGGGAGTTAGAAATTTAAGAGATCCTCGTGTAAAACATCTGGTGTCCGGGGGATAATGGAGTCAACATCCAGGCTTGGGCACATCTGCTTCAACAGGAGGCGCAGCCTGTCATTTTCAGATGATTTGGCAGCAGCCACCT
s NC_004367.genome 73143 857 - 149696 ACTGGCGCATAAGCATTGTTTGTGAAAGTTACACTCATAGTGGGATGATGGGCCTTTGGCCTTATTCCAGATATAAGTACAATGTGAACCATAAATATCATCAACCAGGCAATTATCCTCAGTGAGCGACTTCCAAAGGGCGGATTTCGAGTCCCTGTAAATCCCAACCCATAAAGACTCCCCATTCTTTAAATTCTTCTGAACTATAGGTGAAGTATTTGCATTGGGCCCATAAAAAAATGTGCAATTGTGCAGTTGGGCACAAACAGAGAAACAATGTTCCCATGTGTATGTTTGCTGTGTAAAATAAAAGCATAGATTTTTAAATGAAAACGTTGTGACCCTGGTGTTGCAAAATATACAATCTGGCTTCTCAAA--TCTGG---ACCCAAAGCTAAATGTTTTAGGCTTTACAGTCCAGTGTGGCATATCTATATGGGGGCTTTCAT--------TCATCGGTTTAATCATAGTTGAT--ACATTGAAG--TCCA-----AAAACTTGTA-ATTTGG--GAGATCTACAGAAGGTTGCT-------CCACCCATGTTAGATATTGCATGCGTCCAATAAATCTGTGACTCATATAATAGGCCGATACAATGACCAAAGCCAGCACACACACCGAAATAAGTAGCCAGGCAAACCTACACGCGTTTTTCC----TTATAGTCGCCATAACACAAACAACAGACATGATCCGAGTAAGATTTATTAATATT------GTAAA--------AAAGCATAGCATGATTT-AAT-----GAGTTAAATGGTTCAGTGGT--TCGTGGTATCCGGCAGACGTTGAAGGTACTATGGACTCCACATCAAGGGTAGGACACATTTGACGAATTAACACCCGAAGTCTATTATTTTCTTCTGTTTTCGCGGCAGCAACCT

a score=4899.0
s NC_007605.genome 90125 148 + 171823 GTATATACTGACCTCACGGT-----AGTGCTGCAGCAGTTGCTTAAACTTGGCCCGGCATTTTCTGGAAGCCACCCGATTCTTGTATCGCTTTATTTCTAGTTCAGAATCGCATTCCTCCAGCT------GCGAGCAAGGGAATGCGTTACTACAAGTG
s NC_004367.genome 74217 159 - 149696 GCAAAAACAGAACTCACAGTGCGAAAGTGCTCGAGCTGATTTCTAAACTTTGCTCGGCATCGCCGGGAAGCCAGGCGGTTTCTGTATCGTTTTCTCTCTTGGTCAGTCTTACATTCTTCCAGCTTAAAAAAATAACAAGCAAACATTATACCATAAGTG

a score=7029.0
s NC_007605.genome 91089 279 + 171823 GGTGTCAAAAATAGACAGCCCAGTTGAAATATGCATGGCATGCAGCAGACATTCATCATTTAGAAATGTATCCAAGATTTCATTAAGTTCGGGGGTCAGGGGGGAGTCCAGATTCAAATCCTCTGTCATGGACTCTAGTGTTGTGGTCAGTTCGTCCAAATGGCCACGAGGGGGCGGG------------TGGCTCAGGTCCATCTGTCCACATATGGCTGCTTCCTCCTTCTGGGGAATAACAGTGTCAGCCATCTCCCTTAGGGCCTTCACGGCCTGACTGGTTTCTTC
s NC_004367.genome 75186 279 - 149696 GGAGTCAAAAATGGATAGCCCGGTGGCCAGGTGCATGGAATGCAACAGGCAGTCATCTAATAGAAATGTATCCAGCATTTCACTGATGTCCTGCGGCAGTGGGGAACTTAGGGGGATTTCATCAGGCACCGTTTCCAAAACCTTTGACAGTACATCTAAATGGCCACTAGGTGGCTGACAAGTGTTGTGTTGGCT--GGTCCCATCATCCAAACTCGGAT--TTCCATGTCC--------AGCCGCTTCTGCCAACTCCCTGAGGGCACAAACGGCACGCTCGGTTTCATC

a score=2986.0
s NC_007605.genome 91515 36 + 171823 GTTGGCCCACGGGGATCCGGGTGGATGGAAGGGCCT
s NC_004367.genome 75621 36 - 149696 GTTAGCCCATGGGGACCCGGGTGGATGAAAGGGCCT

a score=42541.0
s NC_007605.genome 92131 2358 + 171823 AGCAGGCACGCGGGAAGCACGCCGCTCACGTAGCTCCTCTGTCCGGCGTGGCTGGAGTAGGAGGCCCGGGGCAGTGTCTTAATCAGAGCCCTGACATCCTTAACATCGTCCGTCAGATGGCCTGTCTTGGACGAGACCATAGTCTGGAACATCTCCTCGAGGACGGGATAGGTGAACACCCACTTGCAAAAGGCCTTGAACTTGGAGCTTAGGAGGCCTTCCTTCTCCATCCTGTTCAGGTGTTCCACTACCTGCTTGCCGGAGGCCATGATGGCCGCGCGGTCCACGCCCAGCACCTTGCTGTAGGTGTAGGCCCGCACCCGACTGTGTTTTAGGAGCTTGTACATAGCGGTGCCTATGGTGGCAGGAATCATCACCCGGTTGCTGGGGGCCTGGATGAAGAATCTGTCAGTGACCACTATCAGGTGGTCTAACACGTAGCGCATCACTATAGGGCACGCGATGGAACATGCGTCGTTGCCGGCATTCTCAGCCCGTCTTCTTACCCTGTTGTTTCGGAGAATGGCCCAAAAATTGCAGATGTTGAGCGTGGCCATTAGCCCGCCCCATTCTCGCCCGTGGGCCTTGGCCTCATTTATAAATGCCTTGCATATTTTGTAGGATCTCAGAGTAATCTCCACACTCCCGGCTGTAAATTCCTTGTTGAGGACGTTGCAGTAGTCAGAGACCAGAGAGCCCAGCTGCTTTTTGATTTCAGGAGTTAGCCTCAGAAAGTCTTCCAAGCCATCCTTTTTAGGCCTCATGGCTAGTAGTAACAGAGGAAATGCCCGACCATTAAAATCT------TTCCTCCATGAGCTTTACCTGAAACACTATCCCGAAGTGGGGGATGTGGTGCATCTACTGAACACCAT------------CGGGGTCGACTGCGACCTCCCACCTAGCCACCCACTCCTGACAGCCCAGAGGGGGCTGTTCCTGGCAAGAGTCTTGCAGGCTGTACAGCAGCACAAGCTGCTGGAAGACACCATCGTCCCCAAGATCTTAAAGAAGCTGGCTTATTTCTTAGAGCTGCTAAGCTACTACTCCCCCAAGGATGAACAGCGTGACATCGCCGAGGTTCTTGACCACCTCAAGACGAATCGGGACCTGGGGCTGGACGACAGACTCTGGGCCCTGATTAGGAAACTGCGCCAAGACAGACACCATGCCTC---TGTAAATGTCCTCATGCCAGGAAGC----------GACTACACAGCCGTGTCGCTGCAGTACTACGACGGCATCTCCATAGGTATGAGGAAGGTAATCGCG----GATGTCTGCCGCAGTGGCTATGCCTCCATGCCCTCCATGACGGCCACGCACAACCTCTCCCACCAGCTCTTGATGGCGTCCGGGCCCAGTGAGGAACCGTGCGCCTGGCGCGGGTTCTTTAACCAGGTCCTCCTCTGGACTGTGGCCCTCTGCAAGTTTCGCAGATGCATTTACTATAACTACATTCAGGGATCTATAGCCACCATCTCCCAGCTTCTGCACCTCGAGATCAAGGCCCTCTGCAGCTGGATAATATCCCAGGATGGCATGCGCCTCTTTCAACACAGCAGGCCTCTCCTCACCCTCTGGGAGAGCGTGGCCGCAAATCAGGAGGTCACGGATGCCATTACCCTGCCTGACTGCGCTGAATACATAGACCTACTAAAGCACACAAAACATGTCTTAGAAAACTGTTCTGCCATGCAATACAAATAAATTTCTCTTACCTGCGTCTGTTTGTGTAGTGAGGTGTTGTGTCCTGTATGGTATTCTACTTTAAAAAGGCCGGCTGACATGGATTACTGGTCTTTTATGAGCCA-TTGGCATGGGCGGGACAATC----GCAATATAAAACCCTGACCATCACATGGGGCATTAGGCGACTCTGCAT-------CAGCATCGCTTAAGTATGA-----GTGGGCAGCAGA-GAGGCTCGGTTATTTTGGTTCCTGA----------ACATCTGGCTGGGGCATTAACTAAGCTTATGAGCGATTTTATCACAGGACAAGATGTCACTCTTTCTGGAGGAAATATTGCAGTCAAAATTCGCGATGCTATAAACCAG---ACCCCCGGGGGTGGTGATGTAGCTATACTTTCTTCCCTGTTTGCTTTATGGAATGCCCTCCCA--------ACATCTGGTAGACAATCCTCCAGGGACGATTTAATCCCAGCCGCCGTGCAGGCCTTAACCACGGCCCACAACTTATGTCTGGGTGTTATTCCAGGTGAGACCTCACACAAGGACACACCC-----GAGTCATTGCTCCGGGCTATCGTGACGGGTCTCCA-AAAATTGTGGGTGGATTCGTGCGGATGTCCAGAGTGCCTACA-ATGTCTTAAGGGATTGAAGGCAATTAAGCCCGGCCTT-TATGAAATCCCTAGGATAATACCACACAC
s NC_004367.genome 76234 2335 - 149696 AGAAGGCACAGTGGGAGGATGGTACTGGTATGGCCTCTGAGACAGGCGTGGCTTGCGTATGAAGCCCTAGGTAAACCTTTAATTAGGGACTTTACCTCCATAAAATTATCAGTCAGCTTTCCCGTCTTCGAGGATACCATGCACTGAAACATATCATCCAAGTTTGGATAGGTGAACACCCACTGACAGTAAGCTTTAAACTTAGACTTTACTGCACCATCCTTAAACAGGGCAAGGAGGTGATCTACTACATTCTTCCCGGTACGTAGTATGGCTGCCCTGTCCACACCCAAAACTTTGCTGTAGGTATAACTCTTAGCCCTAACGTGTCTTAAAAGTTTGTACACCGCCGTACCAGCAGTAGCTGGAATCAAAACACGGTTACTGGGTGCCTGAATGAAAAACCTATCAGTCATCACTATAAGATGATCTAAGGCATATCTCAGAATGATGGCACAAGCGACCGAACAAACATCTCCCCCAGAGTTTTCCGTCCGACGTCTCACGCGATTGTTTCTCACAATAGCCCACAAATTACAGACGTTCAGTGTAGCGACAAGTCCGCCTAGTTCCTGCCCCCTGCTTCTGGCCTCCCCTATAAAGGTCTGACAAGTCCTGTAGGTCCTCTGTACTATTGCAGCATCTGATGCGCATAATTCCCCGTCAAGAACCTTGCAGTAGTCAGTCAGTAGTGAAGATACATTCGTCCTAGTGGCGCCCGATATCTTCACAAAGTCTTCCAACCCATCTCTCTTCGGCTTCATT----GTAACTATGGAAAAAAACCATGAGCGT--GAGTCCCACAAGTTCTTTCATAACCTGTTTTTAAAGCACTATCCAGATACCATGGATGTCATCCACCTAATTAACACTGTGCCAACAAAGCCCGGTGTTAAATGGAGCGATTCCCCTATGTGCATTATTC-AACGTGCCA-------CTATTCTGGCCAAGA-CCCTACAGGTTGTACACCAACATAAACTTTCTGAGGAGACGGCAATACCAAAGATATTGGAAAAGCTAAAATGCTTCCTAAAGCTGCTGCATCATTATTCAGACCCGTATGAACAAAAGTTTATCAGGGAAACTCTGGATCACATTTCAGTTAGTCGTGATATGTTTCTTGAGTGTAACCTGTGGACCCTGGTGCGACACCTGT-CCAAGAT--TCATCACCCGTCTAGTGTAAATGTT----------GAAGTAACCCACCCAGACCGGGCAGCCTGGGCCCTGCAGTACTTTGATGGC--CTGGATAGTTCTGTTCGATGCGCTGTCGCCTCTACGTTTACCGAA--GGCTACAACTCTATGCCATCTCTAACCGCTGTTGTAAATCTAGCCCAGGTTATCTTGGAAGCGTCAGCCCCATCTCATGAACCCTGCACCTGGACCAGCTTTTTTAACCAGGTAGTAATCTGGACCCTGGCACTGGATAAATTTCACAACTGCTTTTACAATAGACATATAGAGGGCTCAATAGCCTCCCTGTCTCAGCTTTTGCACATTGAACTTAAGTCCCTCTGCCACTGGATGCTCTCTGTTAACGGATTGTCCATCTTTTGTCACCGGAGACCCCTTCTTACCTTATGGGAGAGCGTGGCAGCCACCAAAGATATAACTGACATAATCCCACTGCCCGATGCAACTGAAATCCTGCACCTATTGAGACATACTAGAAACCTTATAGC------TTTTGGTAATTAGTTCAATAAACCTTACCTTGGCAATGTCCCGTTCCGTATC---CTTGTGTGTCTTCTA-------CTGTTTTAA------CGGGTGATAAGAGCTG-TGACTCCTTATGAGACATTTGGGATGGGTGTGTCACTTTTAAACTATATAACAACTCAACAAC---------------ATGCCTCTTCACCTATGGACATCATCGCTCAAAGATGACAAGCGCTACCACTAAACAAGTTTCTAGCCTTTTGACCCAGGATGGGGAGATTATACCCAAGTGGTTACTCAACTACCCAAACGAGC-----CAAAATGGGTCAAG--GGCACTACTT------------TAGCAATGAGGATTATGGATTCCCTGACCCAGCAAGGCCTCAAAGAGGCACATGGTCCTGTATTTTCTTACCTGTTTACTTTATGGAATCTATTACCACATGGTGCACGTCAGTTAAGCAA-----AGAAAAAGAGTTAATACGCCCAGCCGTACAGGCACTCAGTACAGCCATAGAATTGT-TTGAGGAGCTATTCCCTGAAGAGTCT---ACCATGACCGATCCTGGCATGGTCA-TGCGCAGGGTCGT----ACAAGCCTTAATTGAATTGTGGGATGATGTGTGCGGCTGTCCTGAGTGTATGCACGTGACT--AGAGGTCTGACCCACCTAAAACCGGGTTTGTTTCAAATACCACGCACCATACCACACAC

a score=513.0
s NC_007605.genome 96049 26 + 171823 CAGGAGCAGGAGGAGGGGCAGGAGGG
s NC_004367.genome 79705 24 - 149696 CAATAGCCGGAGGCAG--TAGGGGCG

a score=4414.0
s NC_007605.genome 96517 221 + 171823 GGGCAGGAGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGGGCAGGAGGGGCAGGAGCAGGAGGAGGGGCAGGAGC--AGGAGGGGCAGGAGCAGGAGGTGGAGGCCGGGGTCGAGGAGGCAGTGGAGGCCGGGGTCGAGGAGGTAGTGGAGGCCGGGGTCGAGGAGGTAGTGGAGGCC--------GCCGGGGTAGAGGACGTGAA
s NC_004367.genome  2582 231 + 149696 GGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGAGGTTGGGGTCGGGGCGCGGTAGAGAACACAAA

a score=5038.0
s NC_007605.genome 96828 703 + 171823 TCATCCGGGTCTCCACCGCG-CAGGCCCCCTCCAGGTAGAAGGCCATTTTTCCACCCTGTAGGGGAAGCCGATTATTTTGAATACCACCAAGAAGGTG--GCCCAGATGGTGAGCCTGACGTGCCCCCGGGAGCGATAGAGCAGGGCCCCGCAGATGACCCAGGAGAAGGCCCAAGCACTGGACCCCGGGGTCAGGGTGATGGAGGCAGGCGCAAAAAAGGAGGGTGGTTTGGAAAGCATCGTGGTCAAGGAGGTTCCAACCCGAAATTTGAGAACATTGCAGAAGGTTTAAGAGCTCTCCTGGCTAGGAGTCACGTAGAAAGGACTACCGACGAAGGAACTTGGGTCGCCGGTGTGTTCGTATATGGAGGT-------AGTAAGACCTCCCTTTACAACCTAAGGCGAGGAACTGCCCTTGCTATTCCACAATGT-CGTCTTACACCATTGAGTCGTCTCCCCTTTGGAATGGCCCCTGGACCCGGCCCACAACCTGGCCCGCTAAGGGAGTCCATTGTCTGTTATTTCATGGTCTTTTTACAAACTCATATATTTGCTGAGGTTTTGAAGGATGCGATTAAGGACCTTGTTATGACAAAGCCCGCTCCTACCTGCAATATCAGGGTGACTGTGTGCAGCTTTGACGATGGAGTAGATTTGCC--TCCCTGGTTTCCACCTATGGTGGAAGGGGCTGCCGCGGAGGGTGATGACG
s NC_004367.genome 79875 640 - 149696 TC-TCCGTGCCATCACAGGGATGAACCCCCTTCACG-----GTCCCCCAGTCCACAGCCCACCGTAAGCGAACAATCCCAACAATCACCTAGACAGCAAAGTCCACAAGG-------AACAT-CTCAGGGGAGTACCAGG--------CCTCAGGTGCC-----AGGTGGCGCTACTACTAGGAAACGGGGT--GGAGTAAGGGGTCAGCCG-------------------GCCAAGTGCCATGGC------------------AAGTATACGACCACCGCCGAAGGGCTTACAGCCCTACTAAACCGCAGACATTCTCCTAGAACCAGTAACGAGGGTCGGTGGATGAACGGTGTA-------ATGGCCGTCAACTTAAGCAAGTGGCCCCTATATTCCCTACGCCGCGCATTGGCCCTTGCGGC-CAACGAAGTACGCATCAGCCCTCTTTTTCGATTGCCCTATGGGAGTGCCTTTGGTCCCGGCCCACAACCTGGCCCCATATTGGAGTCCAGTACATGGGGCTTTTTAGTCTTTACTCAAACTAGTCTCTTTGCGGATGATATAGCAGATGCTATAAGGGACTATTGCACTACTCACCCCGGACCAACTCGCAACACTCAAGTAGTTTTAATGAACTTTGAAG--GGAGTGGAGTCCCCCTTCCCATGTTTTTCCCTCCGGGTGAGGAGACTGAAGAGCAGAGGGAAGGTG

a score=40453.0
s NC_007605.genome 97615 1315 + 171823 GTATTAAAAGCCGTGTATTCCCCCGCACTAAAGAATAAATCCCCAGTAGACATCATGCGTGCTGTTG------GTGTATTTCTGGCCATCTGTCTTGTCACCATTTTCGTCCTCCCAACATGGGGCAATTG----GGCATACCCATGTTGTCACGTCACTCAGCTCCGCGCTCAACACCTTCTCGCGTTGGAAAACATTAGCGACATTTACCTGGTGAGCAATCAGACATGCGACGGCTTTAGCCTGGCCTCCTTAAATTCACCTAAGAATGGGAGCAACCAGCTGGTCATCAGCCGCTGCGCAAACGGACTCAACGTGGTCTCCTTCTTTATCTCCATCCTGAAGCGAAGCAGCTCCGCCCTCACGGGCCATCTCCGTGAGTTGTTAACCACCCTGGAGACTCTTTACGGTTCATTCTCAGTGGAAGACCTGTTTGGTGCCAACTTAAACAGATACGCATGG--CATCGCG-GGGGCTAGACCTCTGGCTGGATGAGCACGTGTGGAAGAGGAAACAGGAGAT----TGGTGTGAAAGGAGAAAATCTGCTTCTCCCCGACTTATGGCTAGATTTCCTACAACTCAGCCCCATCTTCCAGCGCAAGCTTGCTGCCGTTATTGCCTGTGTCCGACGCCTGCGGACTCAGGCCACCGTCTACCCAGAGGAGGACATGTGCATGGCCTGGGCCCGCTTTTGCGACCCCTCTGATATTAAGGTGGTTATTTTGGGCCAGGACCCCTATCACGGGGGTCAAGCAAACGGCCTGGCATTCAGCGTCGCATACGGCTTTCCAGTTCCCCCCAGCCTGAGGAACATCTACGCGGAGCTGCACCGGAGCCTGCCGGAGTTTTCTCCCCCAGATCACGGCTGTCTAGACGCGTGGGCCTCCCAGGGGGTGTTGCTACTCAACACCATCCTGACCGTGCAAAAGGGCAAGCCCGGCTCGCACGCAGACATTGGCTGGGCGTGGTTTACTGACCACGTAATTTCATTGCTCTCTGAGCGGTTAAAAGCGTGCGTGTTTATGCTGTGGGGTGCGAAGGCGGGAGACAAAGCTTCACTAATCAACTCCAAGAAGCATCTGGTTCTGACCTCTCAGCATCCCTCTCCCCTGGCCCAGAACAGCACCCGAAAGAGTGCCCAGCAGAAGTTCCTGGGCAACAACCACTTTGTCCTCGCTAACAACTTTTTGCGTGAGAAGGGGCTCGGTGAGATAGATTGGAGGCTGTAGAGGGGTCATCACTATGGCCATGTTTCTGAAGTCGCGTGGGGTCCGGTCTTGCAGGGACCGGCGCCTCTTGTCGGACGAGGAGGAAGAGACTTCACAGA
s NC_004367.genome 80774 1284 - 149696 GTATTTAAAGCTGTCTGTTAAAATGCCT-----AATAAACACTGACAATGCATCATGCACTCTGTTGTCTGTTGTGCACGTGTTGCC-------------TCGTTTTCGTG-TCCCACGGCGCGTCAAATGTCCCGGCTATGCCGTGCTGTCACGTCGATCACTTACGTGAGGAGCATAGTCTACCTTTGAGGAACATAAGTGACATATACCTGGTGAGCAATAAAACATGTGATGGATTCAGTCTAGCCACTTTAAATTCTGTCAAGCAGGGCAAGAACCAGGTGGTAATTACCAGATGCGCTAATGGGTTTAACGTGGTCGCTTTTCTACGCGCACTGTTACAGCGTCCCGAGGAATCTCTCCCAAGTAAGCTTAAGGAACTACTGGCGGCTCTGGCTGCACTACATCTGTCTTTCTCTGTAGAAGATCTCCTCTCCGTGGATTTGTATAAATACAGATGGAGTATCAGGAGGGGCTCGATGCGTGGTTAGAAGCAAATGTCTGGA----GCCGCAGGAGGCCACATGCAATACATGGAGAACACCTGTTGCTTCCAGATCCATGGCTAGATTTTTTGTCCCTGACTCCAATCTTACGGAGAAAACTTCAAGCTGTCATTAACTCTGTGCGCAGGCTTCGCCAGCAAGTAACTATTTACCCAGATGAGGACATGTGCATGTCATGGGCACGCTTCTGTGACCCGTATGAAGTGAGGGTCATTATTCTAGGACAGGATCCTTATCACGGTGGACAGGCAAACGGCCTAGCCTTTAGCGTAGCCTACGGATTTCCCATACCACCTAGCCTGCGAAACGTATATGCGGAACTTGAAAGAAGCATTCCAGAGTTTAAAGCTCCGGACCACGGGTGTCTTGAAGCCTGGGCCTCCCAAGGTGTTTTGTTGTTGAATACAGTTCTGACTGTAGAGAAGAGTAAGCCTGGCTCACACTCTGACATAGGCTGGACGTGGTTCACAGACCACGTCATTACGCTTCTCTCAAACAATTTAAAAGCCTGCGTCTTTATGCTCTGGGGTTCAAGGGCAGGTGATAAGGCTTCAATTATAGATACTAGAAAGCATCTGGTCCTGTCCTCGCAGCATCCATCTCCACTGGCACAAAACAGTACCAGGCGGGGGACACAGCAAAAGTTTATCGGAAACAATCATTTTGTAGAGGCAAACACATTCCTACGACAGAAGGGTCTTGGAGAGATTGACTGGCGCTTGTAG------CCTGCCCATGGCGATGTTTCTACGGTC----------------TGCGAGAATACGCGCCTC-TGCCG--CGGGGAGAATGAATACGCGCAGA

a score=171068.0
s NC_007605.genome 99421 5081 + 171823 [encoded data, 5201 characters]
s NC_004367.genome 82487 5081 - 149696 [encoded data, 5201 characters]

a score=33333.0
s NC_007605.genome 106643 1215 + 171823 ATGCCCACGACCCAAATCGCCCACCACCGCCCTGCGGTCTGGGTA--ACATTATAAAAGGTAACCGAGCTGACGCGGGCCCTGACGCTC------TCCGCGGGTGTTTCCATCATTGTTTGAGATCTGAGGAGGACTGGACCCTTTAAAACATCC---------GGTCACGCCCTTTGCAAATTATTTAAAAGGTGAATGC---TCAACTG--AGAC--------------CATCGCAATCATGAAGTCCTCCAAGAATGACACGTTCGTCTATAGAACGTGGGTCAAAACGCTTGTTGTGTACTTTGTGATGTTTGTCATGTCGGCGGTGGTCCCCATCACCGCCATGTTCCCCAACCTGGGGTACCCCTGCTACTTTAACGCACTGGTTGATTACGGGGCACTTAACCTGACCAATTACAACCTGGCCCACCACCTGACCCCCACGCTCTATCTGGAGCCGCCGGAGATGTTTGTCTACATCACACTGGTCTTTATCGCGGACTGCGTGGCTTTCATCTACTACGCCTGCGGCGAGGTGGCGCTAATCAAGGCCCGAAAAAAGGTCTCGGGTCTTACAGACCTCTCGGCCTGGGTCTCGGCAGTGGGCTCCCCAACCGTGCTGTTTTTGGCCATCCTCAAGCTCTGGTCCATACAGGTCTTCATCCAGGTCCTTTCCTACAAGCACGTCTTTCTCTCGGCCTTTGTGTACTTTTTGCACTTTCTGGCCTCAGTTCTACACGCCTGCGCATGTGTGACCCGCTTCTCCCCGGTCTGGGTGGTCAAGGCCCAGGACAACTCTATTCCCCAGGACACCTTCTTGTGGTGGGTGGTCTTCTACCTGAAGCCCGTAGTTACAAACCTGTACCTGGGGTGCCTTGCCCTGGAGACGCTGGTCTTCTCGCTCAGCGTGTTCCTGGCCCTGGGCAACAGCTTTTACTTTATGGTGGGGGACATGGTGCTGGGAGCCGTGAACCTCTTCCTCATCCTGCCCATCTTCTGGTACATTCTGACGGAGGTGTGGCTGGCCTCCTTCCTGCGGCACAACTTTGGCTTCTACTGCGGCATGTTCATCGCCTCCATCATCCTGATCCTGCCCTTGGTCAGGTACGAGGCCGTCTTTGTCTCCGCCAAGCTGCACACCACTGTGGCCATCAATGTGGCCATCATACCTATCCTGTGCTCGGTGGCCATGCTCATCAGGATATGCCGG---ATTTTCAAAAGCATGCGCCAGGGCACTGACTATGTCCC
s NC_004367.genome  89898 1243 - 149696 ATGCGTACGATCCATATCGCCCACCATC-TTTTGCA-CCTGGCCACCACATTGTAAAAGTGTACAGACACAATATTGGCTACAACATGCGTTACGTCCGAGGCCATTTCCTCCACTAAT---GGTTTCACCCTCCTCGCACCCCTTCCAACTCACCATTGGAATGTTCCCAACCCTTGTCCATTATTTAAAAGTTACGGGCCAGTCATCTGTCAGAATCAGTTACACATCACATCGGCACCATGAAGTCTTCAAAGAACGATACCTTCATTTATGGAATATGGATCAAGTTACTAATTGTATATTTTGTGATGTTTTTCATCGCCGCAGCAGTCCCCATCCTAGCGTCATTCCCAAATTTGGGATTTCCATGTTACTTTAACGCAGTGGTGAACTACAGTGCCCTCAACCTATCCGAATATAATGTCATGAATCACATCACACCGACCCTGTACCTAGAACCACCGGAAATGTTCACCTACATGTTTATTTCATTTATGTCCGACTGTGTGTCTGCCATCTACTACGTATGCGCCGCGGTGGCGATGTATCTTGCCAAGAAACAGGTATCCGGCCTAACGGATCTCTCATCGTGGATTAATTCGGTAGGTTCCCCAACTGCCCTGTTTCTTTGCATCCTGAAAATGTGGTCTATCCAGACCTTCATCCAAATCCTGGCATATAAGCACCTATTTCTTTCTGCATTTATCTATTTCTTACATTTTGTGAGCTCAGTGATTTATGCGACTGTATGCATCACCAGGATGTCACCAATCTGGATCATCAAGACACAGGATTCATCAATTCCAAGGAACACTTTGTTATGGCGCGTTGTATTCCAATTTAAGCCTATAGCGACAAACTTTTGCATGTTATGTTTAGCTTTGGAAACTCTGGTATTTTCACTAAGCATCTGTCTCGCCATTGGAAACAGTTTTTACGTGATGGTAGCCGATGTGGTGCTTGCCGCCATTAACTTATTTGTGCTGCTTCCATTAATTTGGTATATCATCACAGAGGTCTGGCTGCATAAGTTTTTCCCTCATCCATATGGATTCTATATAGGTACACTCATAGGATCCATAATATTAGCACTGCCTCTCATACGTTACGAGTCGATTTTTGTTTCAGCTAAGCTACACAGCACCATTGCCGCCAACATCTCTATAATCCCAATACTCGGATCCATAGCCCTTATGATCAGGGT-TGTCAGGTCATTTCTAAAAA-----ACAAAGACACTGAATACAGCCC

a score=59550.0
s NC_007605.genome 108463 1591 + 171823 TTGGTTTTTTATTTGGCAAAAACAGCAA-TTCATCATTTTCAGAGTCCTCATCATATTCGAGCCCCTCGTTGGTTTCCCCGCAGGCCCTCCCTTCTTCGGCCGCTATTAGCTTAGTAGTCTCCAGGTTAAACTCCTCATAGTCATTATACAGGTTGATTATTCCCCCGTCCACGTCGCCTATGGAGTTGACTCGTCGTCGGCAAAGAGACCAGAGGGCACCCATGGCGCGGTGTCAAAAGTATTGTCTGCGTACGCTTTCCAGGAGCCAGCCGCGGTGCTCAAGGTCTTACGGATGACAGAGTCCGGCAGGACCACGGGTGTCACCAGCACCGCCACGGGAATCTCCACCGAGGCGTCCAGAAGCAGGTCTGAGCCGAGCGTGCAGGTCGCCGGGTCTAGAGGCGACCGTTTTCGAAAGAAGGCCGTCACAATGTTCACCCGGGG--TGAGCAGTCTCTCCCGGGCTTGCCACCCCCACTGTGGCGGACGTAGTCTCCAACAATTTTGTATTGGAGGAGCACCTGGTAGAAGTAGTTGTGCCGTGGATTGATGAAGATGTTGACTGGGACCCGGTCTTTAATACCAATGCGCCCCGCATTTTCGCTTGGGTCCGTCATTACGTAGAGCATAGACTCCACCCCCCTGTTGGCAGCTAGGCTGTCTGCCACCAGGTCATGACCGGGGCCCAGTTTGCGCTTACGGACATCTTTAAGATTCCAGGCCTCATCCTGCGTCAACAGATAGTCACCCTCCGAGGGCAACCGCCCATCCGGGACGTACTCCACGGTAGGACGAGCTATAGAATTGATAAATCTGATAAATGACCTCTTGCATGGCCTCTTGTAAAGCGCAGTGTAGGATGGGTAGATGGGGTCAAATTCTGACTTGGAAAAGAGGTACTTGAAGCGGCACTTAATCTCATAAATGCAGCTCCGGTCGGTGAACAGTATAAAGTCTCCCTGTGACTCCACATTGACGCAAAGATCCAGAGACACCCCAAAAATGCCATCCGTGGGACTAATCATAAAGCCAAATTGACGGTTGGCGGATGCGTCCCCGCAGATGAGCTTACAGACAATGTCCTTGACCGTGTCCTCACACCGCAGGCCAAAGGCCACAGGTCCCCCAAAGTAGTGATTTGTGGAGATGGGAGCTGGCTCAAACACCTTGGTGGGTCCATTCTTAATGGTGGAGAGCAGCTTGGAAGAGGAAATTATGCCATTTCGCAATATGTCCCACATCAGGTTCTCAGACTGCCCCCTGGTCATGGACTCCACGTACGAGCAGAGAACAGTCCTCTGCTCGTCGGTGGCCTCCTGTAGCCCCCAGTAAATGGATTTCAGGGAGGGACCGTCCTTGCTGTCATTCTCTTGGACTAACGAGGAGACAAAGTCACAGAAGCCAGTTTCACCAGAGAACTCTTGTATTTGTTTACAGAGGCAATAGAGATAGACAAAGCGCATGGCCGGCATCTGAGGTGGACGGTCAAGGTTACGGACAAAGGCCTCAGTCTCCGGACTGCGGAGGAAGCGGGCAAACGTGTAGGAGGTCATCTCCTCCATGGGATCCTCGAGCTCATCCACGTCGGCCATC
s NC_004367.genome  94369 1576 - 149696 TTTATTTTTTGTTTGGTCAGGGCCGTAAATTCATCATC------GTTGTCATTATCGGAGAGTTCATTTGTGATTTC------GATCTCATTTTCATCATCGGCGATAAGACAAGGTGTTTCCACGGAAAAGCACTCAAAGTCATCATATAGATTAATTTCTTCCCCATTTACAGACTTCAGGGGGTATACTCTGCGCCGGCAAAGAGAGAAGATGGAACCCATGGTGCACTTTCAAAGGTATTTTCGGCGTATGCCCTCCCAGATTCTGCAGAAGTAGCCAGTGTCTCCTTCACGACGGAGGGAGGGATGTATATTGGTGTTACAAGAACAGCCACGGGTATTTCAACAGATGTATCGAGTGGTACTTGCGGACCGATTGTACAGAGTGCCGGGTCCGACGAAGATCGTTTGCGGAAAAAAGCTGTCACAATATTCACTTTGGGCTTAGGGTTTGTTTTCTTTGATTGAGACCCCCA-----GCGTATGTAGTCTCCTACAATTTTGTACTGAAGCAGCACTTGATAGAAGTAGTTGTGTCGCGGATTAATGAACACATCTACAGGGACGCGGTCTTTAATACCAATTATCCCTGAATTCTCACTTGGGTCATTCATGACGTAGAGCATAGACTCGGCCCCTCTATTATAATCTAAACACGTGACTACTGTATCATGACCTTCACCTAGTTTGCGGCGTCTCACTTCCTTCAAATTCCAGGACTCATCCCTAGTTAATAGGTAGTCGCTTTCTGATGGAAGCCTCCCATCGGCTACATATTCAATGGTTGGACGGGCAATAGAATTAATGAATCTAATAAACGATTTCTTGCTTGGGTTCTGATACAAAGCAGTGTAAGATGGGTAGATGGGATCAAATTCAGATTTGGAAAACAAGTACTTGAATCTACACTTTATTTCATAAATGCAGCTGTCATCTGTAAACACTGTAAGGTCTCCTTCTGTTTTAACATTCACACACAAATCTAGAGAGACCCCAAAAATGCCATCCACGGGGCTTATCATAAACCCAAATTGCCGCTGCTCAGAATCTACTTTTTGTATCAGGTTGCAAATAATGTCTTTTACCGTATCCTCACACCGTAAACCAAATGCAATGGGGCCGCCTACATAGTGGTTGTTGGAAATTGGGTTTGGCTCAAACAGTTTCATTGGTCCATTTTTAAGAGTGGACAGCAGTTTTGAAGATGAAATAATCCCATTCCTGAGAATATCCCACATCAGGTTTTCAGACTGGCCACGTGTCATAGACTCAATATAGGAACATAGTTGGGTTTTTTCTCTTTCTGTGGTTCGGGCCAGCGCTCTGTAAACCGCCCTTAGGGACGGTGGGGTCTCACGTATATTCTCCGGGATTAACGCCGTCACAAAGTCACAGAAGGCAGTGTCACCTGAAAACTCTTGTATTTCTTTACAGAGACAATAAAGATACAGATAGCGCATTGTGGGCATCCGCGGCTGTTCCCGAATCTCCGAGGCAAATCTTACAGCATCTGAACTGCGCAGAAATCTGGCAAAGGTAAATGTCGTCATATTGATCATCGGATCCTCCATTTCG-ACATGTTGACTACC

a score=57809.0
s NC_007605.genome 110054 2256 + 171823 TGGACC------AAAGAAGTCGTCTGCCAAGAGTTCAGCTACCAGACCTGGAAGATGAGGGTGCTCAAACCGTGGGCGACAGTTGAAGAAGTAGCTCTCCTTGAACCTCTTTTTAAGGCTCCGGCACCACTGCAAGAATTGACTCATATGCTCCGCCGTGACAT--CCACGCACGGACTCTCGCCACACGAGGTCAGGCCCATGTCTAAGTTCAGGTTCCACATCTGCGACAGCACCTCCAACAGCACCACCTTTGGGGCTGCAAATTGCAAAAAGTAGAGCGGGTCGGATCGGTCAAATCCCATGTCAGGGTTGGGGTAGGGGATTTTGTGGGTGGAGTCAGCGAGGTGCATGATACCATAGAGCAGCGAGTAGCCGAGCGACTGCAGATCCAGGCGAAGGGCCGTCTGCGCCCCCACGGGGCCACACGCCGAGGGGTCAGGGATGTGCCCAGCCCCCCTCAAGATGTAGCACTTGCTCAAAAGGCAGAGGGGCTTATAGGTGTCCTTGGCTATAGAAAATGGTTCCCTCTGGCAATAGAGGCGATAGAGCTGCCGGCCCTTAGAAGACTTTAGCCGCACATCCAGCATCTTGTTGCGGTCGTGGAGGGAAGCAGTCCCATAATCAGTCAGGACCAGCCTACCCATGCCCCACATGGTGTCTGTGAAATCCACCAGGATGTTGCTGGGGCTAATGTCCGAATGGAAGAGGCCGCAGTGCCGATTCAGAAAGTAAACGGCATCTTTGAGGCCCTGAAAGCCCCGCACCAGGGGCTCAATACTACCATCATGCCAGTGGCCATAATCCTGGAGACTGCATCTGAACTGGGGCATAAACAGGGCGTGGCAGGACGTGCAGGCCGACAGGTAGTCCACCAGGGCCTTGTCCTGCCCATCCTCGGCCGTGGCCTTCCCAATCTGAATCATGTCACACACCATGAGCTCGTGATACAGCTCCGTCACAGAGTCATAGAGTTTGACCGTGGCATTATCTGCATGTGCATACACGGCCCCGTAGCTCCCCCGCCCCAGCAGATACTCGCAGGTAATGGGGAGGTGATCACAGCGCGTCATGTTCTCCGGCAGCTTTACATAGAGGGTCTCCGTCATGTCATCAATGTTGGTCACCTTCAGGTGTTTGTGCTGAAAGGTGAAGTAATCAATGACAGTCACCTTCCCCAAAAAGGCCTGGGTCTCTCGAGGGGGTTCTGGGGAGACACTCAACTCGCCACTGCTGGAGGA------------GTTCGTCGGGCTCAACTCCGCAGCCATATTCACATCCATGTTCCTCAAATGGCTCGAGGGCC-------TGTCGCAGCTCGTCTCTGGCCTCAAGCTCCTGCTCACGGAGCTCCTCCACCCGCTCTAGCTGCTTGTAGTTGATTTTTGGAAAT-------TGAGTCT--TGGTCGCGGTGACCACCCTCTGATAGGTAGAAATTAGCTGTTTGGACTCAAACGTCTCCCTTGCGTGGCGCAGGGACTCTAAGGCACCCCGAGCAGATGTAAACTGTGTTTCAAACAGAGCGTGGTCCCTCCCAAATCTGTCACGTGCGCTCACAGCCGCTCTCTTTTCTACCGAGGCTCTTAGTTGCTGGGCCACCAGATCTCGCTTAGAACTACTCATCTTCATAAGTCACCATGTCCGCAACTATGGAGCCCAGATCATACGTGGGGTAGAGTACGGTAGTTCCAGTGGAGGCTTCCCGGTAATTTCCCACAGCGTCCACCATATATCTTTCTGCCTCTCCCGTTAGAATTAGGCAAGGATCATACGTGTCCACCGGCCT---TTTATACTGAGCGTTTAGGTTTTGTTTATGTAGCAAGCACAAAAGGCACACACGAGTGATGCAAAAGGGTTCCTGAGGCAGCAGGCAGAGCTGTTTTGCCATTTTATTCAGGCGGCTAACGTCAAAGGGAGGAGCTATATCCTCACCCTTCCAG----------TCACGC-------ACGTCCAAGTACAGGGCATACACACACCTGGTGAGGTGTGCCAGGAATGCCTCTATGTTGGCACATGGTGTATAAACCGCAGTGGGTAGCAGAATAGGGCCCCTTTTGCCCCGTGCCGCAGCGTAAACGCAGTGACGCTCTTCGCAGTGGGACCTGGGGCCGTAGAAGAGGGCCCACATCCAAGGGAGTGGGTCTTCAGGCACCAGGGAGGTCCAGGTTTGGGAGTGGGCCAATATTTGCAAGGCCTGACCTATAACC---TCATCTTTGTTCCAGGCCAGCGCAATTCGCATAAGGTCCCCATCAAACACCTCAAAACACAGACCCATG
s NC_004367.genome  96133 2292 - 149696 TGGACCTGCTGAAAAGTAGTCTGTAGCAAGTAATTCTCCAACTAGTTCAGGAAGCTCAGGGTGTTCAAGGCGCATACGACAGTTAAAGAACTGGCTTTCCGCAAAGCGCTTCTTAAAAGATTTACACCACCGAACAAACTGACTCAGATGGTCC--TGTGACAGGGCCACGCACTTAACCTCGCCACAGGACGTGATGCCTAGGTTAACATCCATGTTCCACAGTTGACTCAATACCTCCAGTAAAACAATCTTAATGGCTGCAAATTGCAAATAGTATGCTGCATCTGATCTGGGGAGGCCGACGTTTGGGTAGGGATAGGGGATTTTGTTCGTGGTGTCAGCGAGTTTAACAAGACAATATAGTAGAGAGTAGCCCAGGCATTGCAGGTCCATATTTAGAGCAGTCTTGTCATTCATTGGCCCACAGGTAACCGGATCCAGTTCTTTTCCCATCATCCGTAGAACATAGCACCGGCTTAGTAACATAAAGGGCTTATAAGTGTCTTTTGCCACTGTAAATGGCTCACGCTGGTAATACATCTTGTAGAGTTGACGGCCCTTACTGGATTTTAAACGTACGTCCAGCATCTTGTTTCCACTGTGCAGGGTCGCATTGCCGAAATCTGTCAGGACAAGCTTTCCCATGTGCCAGAGGTGAGGTGTGAAATCCACCAAGATATTGCTTGGGCTTACATCTGAGTGAAAAAGTCCACAATTTTTATTTAGGAAGTGTAGTGCGTCCTTTAGCCCCTTAAAGCCTTGAACCAATGGATCAATGACTAGATCTGTCCAATAGTCAAAATCTTGTAGACTGCAGCGGTACGGAGTCAGAAAGAGTGCATGACAATGTGTGCATGCAGAGAGGTAGTCGATTAATGCGGCCGTCTTTCCATTTTCAGATTTTTCCTTTCCAATTTGAATCATGTCACACACCATCAATTCATGGTACAACTCTGATATGCTGTCATACACCTTTACAGTCGCATCTGTGCCGTGTGTATACACGGCGCCGTAACTTCCCGCTCCTAGTAGATGGTTAAAGGAGATGGGTTCGTGATCACAGGTGGTCATTTGATCTGGAAGTTTTACAAACAGAGTTTCGGTCCTCTTATCTATGTTTGTTACTTTTAGATGCCTATGCTGGAAGGTAAAGTAATCAATAACGGTAAGATTTTCCAAAACGTCTAGAGTGTTATTTTGGGACCGATGGGAGTTGTTCCAGGCGCCAGCGCTCAACGATATCTGCTGGCTGTTCATCAAATTCGTATCCATTGCCGTGTTCTCCTCCATCCCGTTTGAAAGGTGCAAGGGCTTCCTTAATCTCAGAGCACGTCTC---CTCCAA----CCGGTCCTGGAAATCTTCAGCGAGTTCGAGTTCCCTATGGTTTATTATGGGCAATGTTCCACGGAGTCTTCTGGATCTTGAGAGGATACACTTATAATCAGATACAAGGCTTTTCAATTCAAGGTCGGACCGTGTGCGGTTCAATTCCCTAACTGATTCCTGAGCTGCAAGCAGTTGGTTGTGAAACAAAACGTGATCTTCTCCAAATCTGTCGCACGTGGAGACGGCGACTTTTTTTTCAATGCTTGCTCGTAGCTGCTGCGCTATCAGATCTCTCTTAGTTTTAGCAGTGTCCATGTGCCAATAAGTCTGTGGCCATAGACTTAAGATCGTAAGTAGGAAATAAGACCGTAGATCCCGTCTTATACTCTCTATAATTTCCTACATCACCAACTAGGTATTTTGCCGCCTCTCCAACAAGCATAATACAAGGACTG---GGGGCAGTCAGACTTGCTTTATACTGCGCAGTTAGATTCTGCTTATAAATTAAGCACAGTAGACAAACTCTTGATAAATGAAGTGAGTCACACCTTAAAAGCCCCATTTGGTGAATCACTCTGTGTAGGCGTGCTGGGTCAAAAGG--------TATGCTGACACTTTCCGGGATCAGACCTCCCACTTCTGTGATGTCAGAATAGAGGCCTGTCACAGAGCGAGTAACAAATCCCATGAATGACTCTATGTCCGCCTCTGGGCGAAGGGCCATTTCAGGGAGTGCCATAGGTCCGGGCCTGCCCACGGTTTCCTTATACATACAATGGGGACTATCGCATAAGGACCGGGACCCATAAAACAATAGCCAGATCCACGGCAGTGGGTCTTCCGGAATGAGGGATGTCCATGTCCTGGGATGGGCCAGTAATTGCATTGCT---CCTGTAATTATGTCATCCTTGTTCCAGGACAAGGCTGCCCGTAAGATGGGGCCATCATAGACCGCAAATGGTAGACCAGTG

a score=33256.0
s NC_007605.genome 112464 1146 + 171823 CGTGCCAGGGCCTGTTGTCCTGGGGGAGGATATTGGACACGAGCAGGAAGCTCTTGAGTGGCGTCTCCACCAGCTTAAATTGCTCGGGCGTGTCCTGGCAGGCCTCCAGTGCCAGTTCCAGACACTGCCCATACCTGCGGGCGAGCATCGGGTCATCGGGCATATCGGCCTTGACCGCGTTGAACATGCTGTATGCCTCGCAGCGCGGCCGTCTGACCGAGAACCTAAGAAACGCCCTTCAGCAGGACAGCACCACGCAAGGCTGCCTGGGTGCCGAG-ACCC--CGAGTATTATGTAC-ACAGGGGCCAAGTCAGACAGGTGGGCTCACCCTCTGGTGGGCACAATTCACGCCAGTAATTTATATTGCCCAATGCTT-CGAGCATACTGCCGCCACTATGGCCCCAGGCCCGTGTTTGTAGCTT--CTGATGAATCAT-TACCCATGTTCGGTGCGAGCCCTGCCCTTCACACCCCAGTCCAGGTCCAGATGTGCCTACTACCAGAGCTACGCGACACGTTACAGCGCCTGCTGCCACCACCCAATCTTGAA-GACTCCGAGGCCTTGACGGAATTCAAGACCAGCGTGTCCTCTGCCCGTGCCATCCTTGAGGACCCCAACTTTTTGGAGATGAGAGAGTTTGTCACCAGCCTGGCCAGCTTCCTGAGTGGTCAGTACAAGCACAAGCCCGCCCGCCTAGAAGCATTCCAGAAACAAGTAGTGTTACATTCTTTTTATTTTCTGATCTCAATCAAATCTTTAGAGATTACAGACACCATGTTTGACATCTTTCAAAGTGCTTTCGGATTGGAAGAAATGACGCTGGAGAAGCTGCACATTTTTAAGCAAAAAGCCAGCGTGTTTCTTATCCCCAGGCGCCACGGCAAGACCTGGATAGTCGTGGCCATCATCAGCCTCATCCTCTCGAATCTCTCCAACGTGCAAATAGGCTACGTGGCTCACCAGAAACATGTCGCGTCCGCCGTTTTCACTGAAATTATTGACACCTTGACCAAGAGCTTCGACTCCAAGCGTGTAGAGGTCAACAAGGAGACCAGCACCATCACGTTTAGGCACAGTGGGAAAATCTCCAGCACCGTAATGTGTGCCACCTGCTTCAATAAGAATGTAAGACCTGACGTTTCAGTACTTG
s NC_004367.genome  98651 1134 - 149696 CGTGCCAGTCTCGTTTGTCTTGGGGCATAATATTGGACACCAGTAGGAAGCTTTTTAGGGGAGTTTTGACCAATTTAAACTGCCCTGGCGTGTCCTGGCAAGCATCTATTGCTAGTTTAACACATTGTTTATATTTTTTGGCCAGCTCTGGATCAGACGGCGTATCAGCCTCCACTGCGTTAAACATGTTCTATTCACAGCAACGGCTCCGCTTACAGGAACACCTACGCCGAGTGTTAAAGAATGATGGTGAAGGTCGAGGATGCCTCGGATCCGAACATCCATCAATAATTATAGACTGCAAA----AAGTCGGACAGGTGGGCTCATCCCCTAATAGGAGTGATTCATTCTACCAATTTGTATTGCCAAACGTTTGCCCTCATTTTGTCGGACTTTTGGGCCGCGAATCGTA-----AGCCTTCCTGAACAAGAGTGCGCCCGGGCTACATAAGGGGCCGAGGCC---CACCCCG--------TCAAATGCACATGGTCGCAGACCTGTCGGTAACACTCGAGCGGTTGCT-CGAAAATCCAGGCCAGCCTGACCAAGAGACACTGACTGAGTTTGAAACCGGAGTACGATCAACCAAGTCTATCCCGGAAGATCCTACTTTTAAGGAAATGCGCCAGTTTGTTAGTGAATTGTGTTTGTTTCTAGATGGGCAGTATAGGTGCAAAAAGGCAAGATTAGAGCCATTCCAGAAACAAGTAGTGTTGCACTCCTTTTATTTCCTAGTCTCAATTAAGTCAGTGGAATTGGCTGATACCATGTTTAACCTGTTTCAGGATTTATTTGGACTGGGTGGAATGAGCCTGGCCAACCTAAAGACATTTAAACAAAAGGCCAGTGTGTTTTTAATCCCAAGAAGACACGGCAAGACATGGATCATTGTTGCAATAATAAGTTTAATTCTAGCCTCTATGTCTAATGTACAGATAGGTTACGTGGCTCACCAAAAGCATGTGGCTATGGCAGTCTTCGCAGAAATAATCGAAACCCTAAATAGGGGCTTTGATACTAGGTGTGTGGAAATCAACAAGGAAACCAGCACGATCACATTTCACCATCCAGGAAAGCAGTCCAGCAGCGTCATGTGCGCTACGTGCTTCAATAAGAATGTAAGTATCAAGGCGTCAATACATG

a score=35389.0
s NC_007605.genome 113610 1393 + 171823 GCAATTGTAGAGCATAGCCCGGCTGTAAAGGTCAGAAAATCGCAGCAGGGTCCAAGGTTGTGCTGTACATGGGACCTCTTTCCCATTAGCAAGAACCCCCTGCAGGACACGTGACATGTCCGGGTGCATTTTGGGTGGGTTAAATCTCAGTCCCACCACAAAGGGGGCATCCTCCGGTTTGAACATCAGACCCAACAAAGCCCGATGCCCAGTTATGGGTACGTAGTCGTTGTTCAGGGCCGTGCATGGCAGCAGACAAGGACAGGTGCCAGATGTGCCTGGGCTATCGTCCTCCGTCCAGCCACGCAGGATGTTCACGTGGGCCCCGGCACCATAGCATGTCACACATTCCCCGTTATCACATCTGGTTAGCAGGTTGATAAAATGGGTCAGTGATGGAAAGGTTGGCATATTGGGGCAGCACATCAGCATGTCCATGTTAACGAAAAACATGTACAGGGCCCCTTCTGCATACCAGGCACCACCCCGTCCCAGTGGGATGATCTCCGAGGGTGTGATATCTTGCAGTTCTTCTACTGTTTTAACGGCGGTTGAGGTGGTAAAGACGTGGGCCGTGGTCAGATCTGTGCAGGTGACTACAGGGTTACCCCTAATCTCCACAGGCACCGCCTCACCCACTGCATCTGAGAATACCCCAAAGTACATGAGAGTCAGGCTGTGTGGCCCCTGGACTGCCTTAGTGAAGAGAACCTCGGGCCTGGCCACGGTGGCTAGGGTTCCATTGATGTAGACGGTCACATAGGTGGGCTTCTTCTTGGGCTTCAGCACAATGAGGGTAACATTCATGTAGGTTTTAGGAGGTCCGGCTATCTGAGGCACGTACACAGCTGACACGGCGGTTGTGGCCGTATAGACTTTCATCTGGGGCGTAGAGGCATCGCTCAGCACCCAGAGGCACTCCTTGTTGAGGAACTTGCGAAGCTGTTCCCGGCTACTGTTC--GCGGCGGATGCCATG---ACGTGCCAGAATATATCCCCTCTCCTCGGGGGTGAGTGCCAATTGG------CCTTTAATAACAAAGCCCCCAGGCAGCACCAAAAATGCCTGCCCGTCCGATGTGGTG--GCCAGGTGGACGCAGTGCCCGTCAGTTCCAAGGGCTACTAGCTGGGAAGCAGCCCCAACCAGCCCACCCGGGGGCCTGGAGTCGATCACCTTACCCCAGGCCGAGGCCCCTTCCTCATACAGCGGGTGGCTATCTATCCATAGGCAGGCATCCGGCGTCTTT-------------GGTGCATTGGAGATAGTAGCTTTCACCCAACAACTTTCCCAACTAACCCGTGTCTGGACAGTGAAGAACGCTTCCCTGATCAGGTCTGAATTTTTATAGATACGGGAGTAGGAGGTGGGAATAACAACTGGGATTTCTTGTTGTGCTGTCCA
s NC_004367.genome 100037 1402 - 149696 GCAGTTATACAGCATAACCCGGCTGTAAAATGTTGAAAAGCGTAATAGTGTCCATGTTTTAGGTGTACAATCCACCTCTTCACCGGTGGCTAATACGCCGCTCAACACGTTGGAAATGTCTGGATGTAGCGACCCGTGCTTAAAACGTAGACCCACAATATTTTTTACATATTCAGGTTTAAAAATTAGTCCCAGGAGATTCTTGTTTCCTGTTACAGGCACATACTCGCTATGCATCGCCGAGCAGGGTAGTAGACAGGGACAGGTTCCGGATGTTCCCGGACTTTCCTCTCCTGTCCACCCGCTAAACACATTAACATGAACTCTTGCCCCATAACAAGAAATGCATCCAGTGTCATCACATCTAGTTAGTAAGTTAACAAAGTGAGTTAGTGAGGGAAATGTTGGAATATTGGGGCAACACATCATCATATCCATATTGATAAAGAATGTGTACAAAATTCCCGAGACCATCCATGCTCCCCCACGGCCAAGTGGAATAATATCAGACTTTTTAATGCCTTTAAGATCTTCTATCGATGTAACGGGTGTTGAGGAAGAATAGATGTCTGACGTTCTCAAGTGGAGGTTGGTTATCACAGGTGAACCAATTGATTCTACTGGAACCTGTTCATCTACCACATCTACAAACATTCCAAGATAGATCAGGTACACTTTATGTGGGCCCGGAACTTCACGTGTGAACAGTGCCTCCGGCCGTGCACAGGCCATAAGAACCCCGTTGATGTAAACAGTAACATACAGGCCCCTGTCCCTGGGCTTCAGAATCAACATGGTGACATTCATGAACGTCCTCCTCCTACCTCCTAAATGCGGGGAGAACGCGGCGGAAACCGATGTAGTGGAGGTGTAGATTTTTAGTCGCTGATTTGAAGCAGAGTTTAGCACCCATAGACATTCCTTGTTAAGAAATTGCCTCAGT--TTCTCTATTTCTGATCCTACGCCGGTGGCCATGGCTGCGAGCTAAAACAAAGAGTTCCTC------GGCCAGTTCCAGGTGTAACACCCCTTTAATAACAAAGCCCCCTGGCAAAATCAGGACTA--TAGTCTTCTTACGTGACACCGCTACATGGATGTACGAGCCGTCACTTGCGAAGTGAATAAGATCTGCACTGGTTCCA---AGAATATTAGGTGTCCTTGTTGAAATGATGCGTCCCCAGATGGATGGTTTGGCTTCATACAGCGGGTGACTGTCTATCC--AGGT--GCATTCAGAGCTTTCTGGGCTAGAGTCAGGTTCTCCGGCTAAGGTGGCTTTCACCCAGGCACTTTCCCAGCTAACCCTTGTCTGTATTGTAAAGAACGCTTCTTCTAGAAGGTTAGAATCTTTATAGACCCGCGAATAATTGATGGGCAGGGTAACAGGTATTTCCTGTCCTATTAGCCA

a score=2621.0
s NC_007605.genome 115367 41 + 171823 CCCCGGATGTTGCTGGGGTTCTCGAGGGCTGGGTGGTGCTT
s NC_004367.genome 101782 41 - 149696 CCCCTTATGTTACTTGGTTCCTCGAGGGCCGGGTGGTGCCT

a score=16858.0
s NC_007605.genome 115696 910 + 171823 CCCGTCGGTCAGAGCCCTTTTGGCCCCCTCAAAGAGAGACAGGTAATAAATCTGTAGCTCCCCAACCAGCCCT----CCTTCATCGTAAAATCGAAGGGCGGCCACGTGGAAGGGGTTGTAGAGCTCTGGAAGGCCC-TCATCGCAGTACACT-----GGCACACTGGTAAACGTGCCCCGATGGCTAGGCCGTCCGGGCAGCATGCCCCGAGCAGCAAACACGCGGCAGACCCTCGTGAGACCCGTCCGGTCACTGAAGAGAGTCTGGCACCAGGCCCCCTCGCAGTTTGGCACGCGATTGGGGCAAAGCTCTGC-CATAACCGTGTCGGGAACAAATAGGTGCACGAGGAGGGGG---GTCCCGAGGCCACTCAACACTTGGTTGTCAATGTGGACATCCATAGCTCTCTCATGCGTTTGGCTACAGCATCATAGCGCTTGTTTCTGGTGGATTTAAATAACAGGGCCCCGTAGACAGTCTTTTGTGAGTAAATAGAGATGATGACATGGATGTAGAGACTGAGGACCACATCCACCACCTTCTCGGAGGAGGCCCCCCTAAACAGCATCAGGCAGCAAGGGAACACAAAGGAAACCAGGGCCGGGATGTGAGGCCTCAGCGCCCCCTCCTGATCAAAGAGGGCCTCGCTGACCCCGGAGATGACATTCTCATTCAGAAAGTAGTGATAGAGGTGATTGACCACAGTCTTAACCAGGCCCTGGACTTGTTCAGGCTCCCACTTGTCCCGCTGGTC--CTGTGTGTCTTGTCGGATCTCGGTCCAGGGCCTCAGCGCCGGCTGGAAATGCGGCCCCATGTAGTTGCCTGTAAGGGCGCACACCACTCCCTCATGGGTCTCAATCAGGGTGCACTCGCTGGATCCATCACATACGTGGTACTCGCCACAGCCCCAGCAGGCAAACA
s NC_004367.genome 102102 895 - 149696 CTCGTATGCCACAGCCCGCTTCGCGCCCTGAAAAAGAAGGAGATAATAGATGTATAT-------GGAAGCCCCGTTGTTTGCATCGGGGAACTTTATTACGACTACGTCAAAGGGGTTGTAGAGTATGCGTTGTCCCATCTCCTCGGTATACTTTACAGGAACACTGGTGAAAATACCGGTTCTTCCCCCCCGTCCACATAGCCTGCCCTTTTTAGAAAACATCCGAACAAAAGGAGTGGGTTCAGATAAACTATGAAAACGCGTCTGAACCCAGACATAGTCACATGCCGGCA----ATTCACCTATAGTTTCGTGAATAAGATCATCCGGTAAAAAGATGTGAATCATTGTTGCATCCGCCCCGA------TCAGGGTTTGGTTGTTAACGTGGACATCCATGCTTCACGCATGCGTTTTGCAACCAAGTCTGTCTTCTTGTTTCTCATTGATTTAAATAACATGCACCCGTATATTGTCCGGCGAGAGTAAATTGCTATAATTACATGGATGTATAGGCTAA---------CAATTAGTCTCACAGAGTCTGTAGATTTCATGAGAGGTAGGCAATAAGGGAAAACAAAAGAGATTAGAGCTGGGATATGTGGACGCAAGACACCGTCGTCATCAAACAGAGCAGCTTGGACACCGGGAATAACATTATCTTTTCTAAAGTAGGCATATAGGTGATTTGTGATGTTTAGCAGTAATGTTTGTATCTCCTCAGGATCCCACGTGGATTGATTTTCAGCTTCACATCTTGCACAA-----GTCCATGGCCTTACAACCGGCTTCAGATCTGGGCCCACATCCCTACCTGTCATGGCACAGACTACTCCATCATGGGTTTCAATAAGGTGACACTCAGAGGAGCCATCACATACATGATAGGTTTGGCATCCCTCACAAACAAACA

a score=52363.0
s NC_007605.genome 116727 1330 + 171823 TGACATTCCACCCCGGCCAGGTCCAGGAGGGTGCAAATATTCTCCAGGCGCTGCACCTCAGAGACCTCCTGCTCAAAGAGACCTCCCACCGCCACGTAGACGCGGGCCACCGTCCGGGGAAGGTCAGTGGGGTCCCAGCTCAGCAATTCTCC-AAATTCTCTCTCCCCAATAGTGCCTCGCTTCTTATCCTGTCTTTCAGAGCATCCGGGGGCAGACATTTCACCTCTTGTTTGTGGACGAGGCTAACTTTATCAAGAAGGAGGCCCTGCCGGCGATCCTGGGCTTTATGCTTCAGAAGGATGCCAAGATTATCTTCATCTCGTCTGTGAACTCGGCTGACCAGGCCACCAGCTTTCTTTATAAGCTGAAGGATGCTCAGGAGCGGCTGCTGAACGTGGTAAGTTATGTGTGTCAGGAGCATCGGCAAGATTTTGACATGCAGGACAGCATGGTCTCATGCCCCTGCTTTCGCCTGCACATCCCGTCCTACATCACCATGGACAGCAACATCCGAGCAACCACCAACCTCTTTCTGGACGGGGCCTTTAGCACCGAGCTGATGGGTGACACCTCCTC----GCTGAGCCAGGGTAGCCTGAGCCGCACTGTGCGTGACGATGCCATCAACCAGCTGGAGCTCTGCCGGGTTGACACCCTCAACCCCCGAGTAGCCGGACGCCTAGCCTCCTCCCTCTACGTGTACGTTGATCCGGCCTATACCAACAACACATCCGCATCAGGCACCGGAATCGCCGCCGTGACTCACGACAGGGCGGACCCTAACAGGGTCATCGTCCTGGGCCTGGAACACTTCTTCCTCAAGGACCTAACAGGGGACGCTGCCCTCCAGATCGCCACCTGCGTCGTGGCCCTCGTCTCCTCGATCGTCACCCTGCACCCCCACTTGGAGGAGGTGAAGGTAGCCGTGGAGGGCAACAGCAGTCAGGACTCTGCGGTGGCCATTGCCTCAATCATTGGGGAATCCTGCCCCCTCCCCTGCGCCTTCGTGCACACCAAGGACAAGACGTCCAGCCTGCAGTGGCCCATGTACCTCCTGACTAATGAGAAGTCCAAGGCCTTTGAGAGGCTCATCTACGCAGTGAACACGGCCAGCCTTTCTGCCAGTCAGGTCACCGTCTCCAACACCATCCAGCTCTCCTTCGATCCGGTCCTCTATCTCATCTCCCAGATCAGGGCCATCAAGCCCATCCCTCTCCGCGACGGTACCTACACCTACACCGGCAAGCAGCGCAACCTCTCTGACGACGTGCTGGTTGCGCTAGTCATGGCTCATTTTCTCGCAACAACACAGAAGCACACGTTCAAGAAAGTT
s NC_004367.genome 103310 1324 - 149696 TGGCATTCAACACCCGTAATATCTAATAAGGTACAGATGTTTTCTAGCCTCTGGAACCCCTGACAGTCAGTCTCAAATAGTGGTAAAACTGATGAATACACGACAGATGTAATATGATCAAAGTCATTGGT-TTTTAGCATAAGTACCCTCTGAAAGTCCAGTTCACTAAT----TCTCGCCTCCTTTGTTTTCT--CAGAGTATTCGGGGTCAGACATTTCACCTTCTGTACGTTGACGAGGCAAACTTTATTAAGAAGGAGGCACTTCCAGCTATTTTGGGTTTTATGCTTCAGAAGGATGCAAAGATAATCTTTATATCCTCCACCAACTCATCGGATCAGGCCACCAGTTTTCTATATCGCTTAAAGGACGCCCATGAGCGCCTGCTGAATGTTGTGAGTTATGTTTGTGATGATCACAGGGAGGAATTTGACATGCAAGACTCTATGGTGGCTTGTCCTTGTTTCAGACTGCGTATTCCCTGCTACATCACCCTGGACATAAATATACGCACTACTACCAACCTATTTTTGGAGGGTGCGTTTAGCACGGAGCTTATGGGTGATGCTACGTCCATTGCAGAGCAAGGTT----TAAGTAGGATTATCGGGGAAGAAGCGCTTACTCAGCTAGAATTGTGTAGGGTTAACACACTTGAAAAGAGTGTGGTTGACCGGCTAGGGTCAACCCTATATGTGTACATAGATCCCGCCTATACTAACAACACGTCAGCTTCTGGGACTGGAATTGCCGCTGTGACCCTGGCCAGGCACAATCCTACACGAGTAGTCATTTTAGGCCTGGAGCATTTTTTCCTTAAGGATCTAACAGGCGATGCTTCCCTACAGATTGCCACATGTACCCAAACTCTTATCTCCTCCATAGTTAGCCTCCATCCCCATCTAACTGAAGTGAGAGTCGCCGTTGAGGGCAACAGCAGTCAGGATGCTGCGGTTGCCATAGCTACCATCTTGGACGACATATGTAATCTGCCCTGTTTGTTTGTTCATACACAGGATAAAGCCTCAAATCTACATTGGCCTATGTATCTCCTAACTGGAGAAAAATCCAAAGCGTTTGAAGCATTCATTTATGCTGTTAACACGGCCAGTATTTCTGCGAGTCAGGTCATTACATCAAACACTATCCAGCTCTCCTACGATCCAATATCTTACCTCGTGTCCCAGATTAAGGCAATCAAGTCAATTCCCCTGAGAGACGGAACTTACACCTACACTGGAAAGCAAAAAAACCTATCCGATGACGTCCTAGTCTCCCTGGTACTCGTTCACTATCTTGCAGTTTCACAGAAGCATACATTCAGGAAAATT

a score=5200.0
s NC_007605.genome 119065 346 + 171823 CCCCATCAAAGACATAATATGTCTCATAGTGGCAGTGATGATGCATCACCACCACAGCACTCGCCAGGACCCTCTGCATATCTTGTACAAGGCGCCTTTCAACTCGGCCACTGGCTCTGGTGACGTTAAATG--------TCCTGTTCCTATTAGTCACAGCCTGTAGATTTGGGCACCC------------AGACTCAAAAAGT----GCAGCTACATGAAGGGCAGCCGCCTCAAATCCACCATGACCCCCATGGCTGTCCGTGTTGTTGGGGTAATAAGTCACATTGTTAATGACCACGGCCGGGATAAGGGTGTAAACCTTGCAGAATGGATTGGTCGGACACCCATAAGACAGGGGCACCCCAAA
s NC_004367.genome 105549 346 - 149696 CCCCGTTAAACAGATAGAAAGTTTCATAGTGGCAGAAATTGTGAAGTACAAACCAGGCCTTGGCCAGGACCTGCTTCACATTATGCA---GGACTCTCTCACCACG-----TGGCTCAGATGCTTTCAGAGAAGAGATCCTTCTGCCCCTGTTGGTTATAACATCTATGTTGGTGCAACCCGTTTTTATCATGGATACAACATGTTCCAGCGGGTGTTGGAAGGAAA--CGCTC--AGGCCGGCAGAA------------TTCGTGAAATTCGGAAAATAAGTCTCTCCTTCAATCTTTATAGCCGGAACCAGGGTGTAGACGTTGCAAAATGGCTTTGGTGGACAGCTATCTCTTAAAGGGTCTCCAAA

a score=4027.0
s NC_007605.genome 119976 88 + 171823 TTATAAAAGACTTCCACCCTCTCCCCGCTGGCCAAGACACGCCGCTCGTGGACCACGCCATCTTCCTCCCGGCTGATTGTGTGGCTGA
s NC_004367.genome 106202 88 - 149696 TTGTAAAAAACTTCCACGGTTTCTCCAGAGGACAGTTTCTGCTTCTCATGCACCACACCATCCTCTTCCCTACTAATCGTGTGGCTGA

a score=209064.0
s NC_007605.genome 120118 5529 + 171823 [encoded data, 5577 characters]
s NC_004367.genome 106461 5511 - 149696 [encoded data, 5577 characters]

a score=2023.0
s NC_007605.genome 126217 62 + 171823 GACCCGGCCCGGAGACTGGTGGCCCTCCTGCGAAGGGAAGATGGGGCACCTAAAGACCCCCC
s NC_004367.genome 112635 62 - 149696 GATCCATCTCGCCACCTAGTGTCTATGCTACGAAGGATTGAAGCAGCGCCAAAGGACCCCCC

a score=127974.0
s NC_007605.genome 126378 5708 + 171823 [encoded data, 5842 characters]
s NC_004367.genome 112775 5694 - 149696 [encoded data, 5842 characters]

a score=66132.0
s NC_007605.genome 132366 5103 + 171823 [encoded data, 5358 characters]
s NC_004367.genome 118941 5033 - 149696 [encoded data, 5358 characters]

a score=8307.0
s NC_007605.genome 143113 1070 + 171823 TGGAGCTCGGGGGGCGGCCGGGTGGCCCACCGGGTCCGCTGGGTCCGCTGCCCCGCTCCGGCGGGGGGTGGCCGGCTGCAGCCGGGTCCGGGGTTCCGGCCCTGGAGCTCGGGGGGCGGCCGGGTGGCCCACCGGGTCCG-------CTGGGTCC----GCTGCCCCGCTCCGGCGGGGATGGGGGTGCGCTCCCAGGCCGGACCCTGGTGCCAGGCAGGGACCCCGCGCCA---CCCGCTTCATGGGGGGGGAGGCCGCCGCAAGGACGCCGGGCC--GGCTGGGAGGTGTGCACCCCCCGAGCGTCTGGA-CGACGCTGGCGAGCCGGGCCAGCTCGCCTTCTTTTATCC-----TCTTTTTGGGG-----------TCTCTGT--------GCAATACCTTAAGGTTT-GCTCAG--GAGT------------------------------------------GGGGGGCTTCTCATTGGTTAATTCAGGTGTGTGATTTTAG---CCCGTTGGGTTACAT---TAAGGTGTG-----------TAACCAGGTGGGTGGTACCTGGAGGTCATTCTATTGGGATAACGAGAGGA-GGAGGGGCTAGAGGCCCGCGAGATTTGGGGTAGGCGGAGCCTCAG-------GAGGGTCCCC---------------TCCATAGGGTTGAA-CCAGGAGGGGGAGGATCGGGCTCCGCCCCGATATACCTAGTGGGTGGAGCCTAGAGGTAGGT---ATCCATAGGGTTCCATTATCCTGGAGGTATCCTAAGCTCCGCCCCTATATACCAGGTGGGTGGAGCTAGGTAGGATTCAGCTAGGTTCCTACTGGGGTACCCCCCTACCCTACCTTAAGGTGCGCCACCCTTCCT-----CCTTCCGT----TTTAATGGTAGAATAACCTATAGGTTATTAACCTAGTGGTGGAATAGGGTATTGCAGCTGGGTATATACCTATAGGTATAT---AGAACCTAGAGGAAGGGAACCCTATAGTGTAATCCCTCCCCCCCCTACCCCCCCCTCCCTTACGGTTGCCTGAGCCCATCCCCCA--CCCCAGCACCCCGGGGTGACGTGGCACCCCGCGTGCCTTACTGACTTGTCACCTTTGCACATTTGGTCAGCTGACCGATGCTCGCCAC-TTCCTGGGTCATGACCTGG---CCTGTGCCTTGTCCCATGGACAATGTCCC
s NC_004367.genome 126111 1055 - 149696 TGGGGCTCCAGGCCCGGCCGTGGGGCTC--CAGGCCCG--------GCCGTGGGACTCCAG--------GCCCGGCCGTGG--GGCTCCAGG--CCCGGCCGTGGGGCTCCAGCCCCGGCCGTGGGGCTC--CAGGCCCGGCCCATACTGCGGCCCAGAACCGCCCAGCTCCTG-------------GAGCTCCCAGCCC-------------AGGCCAGGACCCCGCGCTTGTTCCCGGTTCATTCGGGGGGGGGCCGCGACCTGGA-ACCTGTCCAGGGCCGAGCGGTCTA-GCCGCTTGGGCGTCCAGAACGCCACTGA--ACCCGGGCAGGCGCGC-TCCTTATATTCAGTTCTGTCCTTGGGTGTGTCCCATTCTCTCTATTCCTATTGGTTAAACCTTAAGGTCTCACTCAGCTGAGTTATTCCTTCTGGTTTCTAGTGTTCCTATTGGTTCCTACCTATAGGTCCCACCCTACAGGTTAATCCTCCTGGTTCAATCTGGGCTCCTATTGGTTAATACCTGTAGGTTGTGACCCACAGGGTTACTCAGGTGGGTAAT-CCTGGAGGTAATTGCATTAGGTGAACGGGAGGAGGGAGGGGTTTGCAGC---TGAAATTGAGAATGGGCGGAGCTAGAGACCTGCTGAAGCTCCGCCCTCTGGGTTGTAGTCCCATTGGGTTTAATTCAGTGGGGGGGGGGTTTGGGGTTCCCCCGATATACCTA------------------TAGGTTCCACCCACCGGGT---------------------TAAACCCCGCC----------------------------------CATTTTAATTCCAGCGGGATACCCCCCCTATTCCAC---------TGCCGTTTATCCTATAGAATTTCCGCTGGGTTCCACAGGAGGGTACCCTTCGGTAGGTACCCCTACCGGTAGGTATTGGTACTACAGGCGGGTATATATA-ATATATATATAGGAGAACCTATAGGA--TTAACCTAGAAGAGATACCTAACCCCCCCCTAACCCCCCCCTTCCCAAATGTAGGTCACCCCATCCCCCACTCTCCATTGGCCC--------------CATTGCGTGCCTTTCACCTCTGTCATCATTACACATTCAG--AGCACACTCATTCCTCCGGCATTCAGGGGTCA--ACCGGGGGACACGT-CCCCGTCCCGCGGACATTTGCCC

a score=44711.0
s NC_007605.genome 149055 1550 + 171823 TACGATATTCCCGTTAAATGTCTTGTTGATTCTCTCAAAGGTGGGGAGGGAGGAGCTCTCCACAACAATGTTCCCTGGCAGCGTGAGCGCGCAGCCCTGCCGTTGGATGTATCTTCTCATGATGGTGCTGATAGAGGGGTCTCCGGCGTAGATGAAAAAGGCCTGGGCCATGCTCTGGCCGGTCACGATCGTTATGGGGTTGTTGGAAATGTTCCGGACCGTCAGCTTGAGGGTCTGGCCCGGCTTCCACTCCTGTGGGTAGACGTAGAAGACCGGGTTGGAGGAGTGGGACACGACAACGGCCGTAATCTTGGAGCTCAGGGGGGCCTCGTAGGTGTTGTTGTATTCCAGCTCCGTGATGAAATTAGGAGGAATAATCACAGGGGAGCCAAAGTAGCGGATGTCTGTGGATTCCCCGTCCCAGCGCCAGTGGCTCTTAGGGTAGGGGTTGTAACGGAAGGCAATAATCACATCATCCAATAGGGTCATGCCCACCTTGACGTTCAGCGGGCCCTCTCGT---TTCAGGTCC------GGCGTGTCCACGGAGACTCGGACGTAGCCCTTACCGCGGCGTATGGCGTTTACCGGACACACCTTCCCCGGGAATGTGTGAATACGGGCGTATGACTTTAGAAATGGGGGCGTGTGCTGCGCCAGCAGGTAAGGCAGGCACTCGTCCTGGCTGGTGACGGGAGAGCCACTGAGGAAGATCTGGGGCTCGCTGGTGTTTAGCTTGTCCCCGCTCTGGGTGCAGGAGCGTGTCAGCTGAATGTCGCTCTGCCCGGGCAGAATCTGCAGGTAGAGGTAGGGGTTCTTGACCAATCTGATGGGCACAATGTACCAGGTAAACTTCCCTTTCTCTATGAACAGGCTGCGCGGATTCAGGACGCTTAGCACGATGTCCTGGTCAGAGTGCATAACGAAGAAGGGCTTGAGGAATACCTCGTTGTCTTCCGCTCCAAAGAACAAAAACGCGACCGTAAAGTAGCGGCTGCCGTAGGTGGTCGTGTTGAAGGAGAAAGAAGGTAACTTGAAGCTGAGTATCTGGCCCACCGAGGGGCAGGGAGGCAGCTCTTGGCACTGCGCGTCCAGCTGCAATACCTGCTTGTTGGTGACGCGGACGTATGAGGGGAAGATCTCGTACTTCCACACGCCTCTCATGAACGACGTGTCTGG-----TTTTTCAGTGGGCCGCAGGCGGCGGAGGCTGTTCC---TGAACGACGAGCGCCGGGAC---GCTAGTGCTGCATGGGCTCCTCCGGGGTAAGCTTCGGCCATGGCCGGAGCTCGTCGACGGGCAAGGTGAGAGTCGGGGGGCGGGCGACGGTGCGGCCCCA----ATACAACTC----TCCGCTCGTTAGCTGGTAGAATATCCGCCCGGCGTCTAGGTTGTCACTTCGCTCGGCCGGCCAGAAGAGCGCAAGTCCAAGTCTGGTGCTGGGGCCGAT-GTGCAGCGGTTTGTGCCCGCAGTTGTAGACTGTCATTTTTATGGGCGAGTGGGCGGTCCACACGCGCGGGCGCAGCACCCATTGGTCGCACGCCGCCTCCTGGAATGTAAACCC
s NC_004367.genome 128932 1556 - 149696 TACCATGTTCCCGTTGCATGATTTGTTGATTCTTTCAAAGGTTGGTAAGCAGCCTATGACAGCCATAATATTTCCTGGAAGAGTTAGCACATGTTGATGCCGGTGAACTGCCCGTTTCATCATTGTGCTTAACCCTTCCCCGCTGTTGTAAATAAAAAATGCCTGTGCTAACGGCTGGCCGGTAATAATAGTGATGGGAAAGTTTGAGATGTTTCGCACCATGAGCTTAATTGTTTGGCCGGGCTTCCATTCCTGCGGATAAATGTAAAATACTTGGTTGTTAGGGTGGGACAAAATGAGCGCTGTGATCTTTGTGCTTAGAGGAGTTTCATAAGTGTTGTTATAGTCAACACTTGTTATGAAGTTTGGGGGGATGATCACGGGAGAACCAAAATATCGAATTTCAGTGCTCTCCCCATCCCATCTCCAGGTGCTTTTAGGGTAGGGATTGTACTTGAAAGCTAGGATCACGTCGTTGAGTAATGTCATTCCAATTTTTAT------TGGCTCCTCTCGTGCCTTCGGTTTTTCTGTGGGCACATCCACTGAGACCCTGACACAGGTTTTGTCTAGTCTCAGGGCGTTTACTGGGCACACTTTTCCTGGGAATGTATGGATTCTGGCAAATGGTTTGCTGAATGGCCGCGTTCGTTGTGCCAGTAGAAATGGCAAAGATTCATCCTGCGTGCTCACCGGAACTCCACTTAGGAAAATTTGGGGCTCGTTCGTTGACAGCTTATCTCCCCATTGCGAGCATGATGTTTCCAAATTTATGTTGCCCTTGTTTGGAAATATCCTAAGGTAAAGGTATGGAGTTTTGACCAGTCTCAAGGGGACCATATACCAGATGAACTTTCCCTTATCAATGTATAAATTTCTGGGGTTGAGTACCTGCAGTTCCACTTCTTGTTCTGAATTAAGCACAAAAACAGGTTTCAGGTACACTTCATTTTCCGTGTCTCCGAAAATCACAAATGCGCAGGTGAAGTAACGGCTGCCGTAGGTCGCTGAGTTGAAGTTGAATGCTGGGAATTGATATCTTATGATCTGACCAACAGAAGGACACGGGGGGAGTTCTTGACATGTAGCATCGAGTTCCAGAACTTGTTTGTTTGTTATTTTGACATGAGATTTGTATAGTTCATATTTCCACATACCTCTTGTAAATGTTGTTTCAGGATGCTCTTCTCGGCGGCTAATA-----CGGAAGCTGTGTCGTAGGGACAAAGAGCGTGAGCGTTTGGCTAGTGCTGCATGGGCAGATCCGGGGAAAGAGTCGCCCATGGTGACAGAGAGTCCACGGGAAGTTCCAGTGATATGGGTAACACAACGGCAGCACCCCAGTGGATACACCTTGATATCCTGTCG-----TAGTAAATGAGTCCCTCGG-----AGGTGTTTACTCCA-TCAGTCGGCCAAAAGATGGCAAAGCCCAGTCTGTCTCTGCGGTTGATGGTTAGGTAAGTAGTGCCCG-GGTTATATACTGTCATAAAGAGCGTCCCTGGGGCGTGCCACATGTTTGGGCGGAGCACCCACCGGTCGCAACAGGCATCCTGAAAAACAAAACC

a score=2754.0
s NC_007605.genome 151408 165 + 171823 CAAACATGGGAGCGTGCACCTGGAAGATGCAGCTGGGGTAGATCTTTACATCTTTACAGGGCGCA-GCGGCCGCCAGACACTGAAGGGCAGAGTTCACGGCGGGCACCTCCCAGAGGGAGCCCACCAGCCCGTACCTGGCCACGGCCAGGGCCTCGTAGGCCGAGA
s NC_004367.genome 131273 165 - 149696 CAAACAGAGGAGCGTGGATGTCAAACGCGCATGATGGGATGATGCGTACATCTTTGCTAGGTTTATGCGGTAG-GATGCATTGTAAAGTTGATTTAATTTCTTCAGTGTCCCACAGAGATTTCACTAAGCCGTATCGTGCTACAGAGAGAGCTTCGTATACGGAAA

a score=7828.0
s NC_007605.genome 151756 758 + 171823 GTTCTTGAGAGAGTCCATAAAATGGCTGAAGCTCCAGGCGTATAGTATAATGAGCAACAGGGCCAAACAGGCGGCGGGGCCTGGGTAGTAGCGGGCAACGAGAGACTCTGTGCAATCAAACCCCAGGCTCCCGGCCTCACCCAGGAAGAGCAGCGGCAGGGACAGCATAAACCAGGAGAAGGCGCAAATGAGTCCGGTGAAGGTGACGTTGCATATCAGGCGCGGCTTCCTTCCGAATTTTGTGCGCAAAAGTTTCCAGATGATGATAACTGTGAGGAGGACGATCAGGACTGCCGCCA---------GTAGGTAGCAGCCGGCTTTCAGTCCTTGGACGGCCGTGTGCATGCCTTTGGTGGGGCCTTCCCTGCACATGTTGGGGCCTCTGTTGAGATTGGCG-----TCGGGGCCCATGGTAATGAGGAGGATGATAATCAGCAGGAGTACCAGACAAAACACGCCCATCA------GGTACAGGCACACATTTCTGTGGGAGGTTCTC------TTGGGCGTTCGGCTGAACAATGCTAGGGTCTTCTCCAACGCCATACCCAAGTGAGTCCATACGGAGCACATCAGGCCCAAGAACATCATGTTCTGGGTCAAAAGGCAGAGACCGGTAGACGAGAACTCCTGAATCATTTTTCCCAGCACCCAGAGCAGCAGTTCTATGAGAAGAGCTATCAGCCAGACATCCATTCGGTGAACCAATTTTCTTACAAAGATGATAAACAAGATGCCAGCCAGTGTTAGCAGAATCAGCAGGACGAGCA
s NC_004367.genome 131629 743 - 149696 GTTCTTCAAGTCATCTATAAACTGTCTGTGTGCCCAAATGTAAAGAAGCAGTAAGAGTAATATGAGAAGGGATCCAAAGGCGTGATAGTATCGAGTCATGAGCGATGATGGGCAAAAGAATCCAAGGTTGCCTGGCTCAGGGCGGAACACCAGGGGTGCGGCAAGTAACAGCCAACAGGTGGCTCCAATTATTCCGGTGAACATCACATTGCAGATTATGCGCATGCGCGTGGAAAGGCGCGTGTGCCAAATTTTGTATGTGATGTAGCACGTGG---------CTATAATTGTTGCTACACAACAGCACAGGAAAAAGAAGCCCTTTGCTGCTTGACGAATGGCATGTCCAGCTTGTGTTGCCCCTTCTCGACACAGATTGGGGCCTCTATTTAGATTTGAGGAAATTCCGGCTTCA-----------AACACACTAGCCAA------TACCAGTATAAACACGGTGATCAATGTTAGGAGCAGATACATAATGATGCATCTATTGCTCACCGGTTTGATGGTTTTGGCAGATACCATTAGAGCACGATGAGCTGCCATCCCACTGTGATGGAACCCAGAAAGCAATAAGCTCATTAACATCATGTGCTGGGTTAACATGCAGAGTCCGGTGTTTGAAAATTCTTGGATTAGCTTTCCTAGTAACCAGAGAAGAGTGTCCATAAACATTACAGCCAGCCACCAGTCTATGGAATCTTTCAGCTTTCTGATTAGCAACAGAAACAG---------------TAGCAGTATGATCAATATGAGTA

a score=362157.0
s NC_007605.genome 153182 11469 + 171823 [encoded data, 11724 characters]
s NC_004367.genome 134020 11467 - 149696 [encoded data, 11724 characters]

##eof maf
