/**
 * UGENE - Integrated Bioinformatics Tools.
 * Copyright (C) 2008-2024 UniPro <ugene@unipro.ru>
 * http://ugene.net
 *
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU General Public License
 * as published by the Free Software Foundation; either version 2
 * of the License, or (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
 * MA 02110-1301, USA.
 */

#pragma once

#include "utils/GTUtilsDialog.h"

namespace U2 {
using namespace HI;

class GenerateAlignmentProfileDialogFiller : public Filler {
public:
    enum saveFormat { NONE,
                      HTML,
                      CSV };
    GenerateAlignmentProfileDialogFiller(bool _counts = true, saveFormat _format = NONE, QString _filePath = "")
        : Filler("DNAStatMSAProfileDialog"),
          counts(_counts),
          gapScore(false),
          symdolScore(false),
          skipGaps(false),
          format(_format),
          filePath(_filePath) {
        checkBoxItems[NONE] = "NONE";
        checkBoxItems[HTML] = "htmlRB";
        checkBoxItems[CSV] = "csvRB";
    }

    GenerateAlignmentProfileDialogFiller(bool _gapsScore, bool _symbolScore, bool _skipGaps)
        : Filler("DNAStatMSAProfileDialog"),
          counts(true),
          gapScore(_gapsScore),
          symdolScore(_symbolScore),
          skipGaps(_skipGaps),
          format(NONE) {
    }

    GenerateAlignmentProfileDialogFiller(CustomScenario* customScenario)
        : Filler("DNAStatMSAProfileDialog", customScenario),
          counts(true),
          gapScore(false),
          symdolScore(false),
          skipGaps(false),
          format(NONE),
          filePath("") {
        checkBoxItems[NONE] = "NONE";
        checkBoxItems[HTML] = "htmlRB";
        checkBoxItems[CSV] = "csvRB";
    }

    void commonScenario();

private:
    bool counts, gapScore, symdolScore, skipGaps;
    saveFormat format;
    QMap<saveFormat, QString> checkBoxItems;
    QString filePath;
};

}  // namespace U2
