gffread (0.12.7-8) unstable; urgency=medium

  [ Charles Plessy ]
  * Remove Breaks/Replace on cufflinks (<< 2.2.1+dfsg.1-4), as oldstable already has 2.2.1+dfsg.1-8+b1

  [ Michael R. Crusoe ]
  * d/tests/{control,run-tests}: instead, we explictly skip cnvkit on s390x

 -- Michael R. Crusoe <crusoe@debian.org>  Wed, 31 Jul 2024 12:54:36 +0200

gffread (0.12.7-7) unstable; urgency=medium

  * d/tests/control: add skip-not-installable so that s390x's lack of
    python3-pysam (for cnvkit) isn't a problem.

 -- Michael R. Crusoe <crusoe@debian.org>  Wed, 31 Jul 2024 12:41:17 +0200

gffread (0.12.7-6) unstable; urgency=medium

  * d/tests: adjust architecture lists, enable more testing with riscv64

 -- Michael R. Crusoe <crusoe@debian.org>  Tue, 09 Jul 2024 13:19:28 +0200

gffread (0.12.7-5) unstable; urgency=medium

  * Revert "d/t/*: work around uninstallable packages."
    This reverts commit 7f28a236e8757d9fce7af87b806e38ddcb61a9b2, brought
    in the previous package upload.  Quoting Adrian: trinityrnaseq is back
    in testing, and boost now defaults to 1.83.
    Thanks to Adrian Bunk (Closes: #1073921)
  * d/control: declare compliance to standards version 4.7.0.
  * d/control: add myself to uploaders.

 -- Étienne Mollier <emollier@debian.org>  Thu, 20 Jun 2024 20:52:03 +0200

gffread (0.12.7-4) unstable; urgency=medium

  * Team upload.
  * d/t/*: work around uninstallable packages.
    The change involves not testing gffread anymore against trinityrnaseq
    until it is back to testing, and not testing against R BioC modules
    until libboost 1.81 transition is finished. (Closes: #1033703)
  * Update standards version to 4.6.2, no changes needed.

 -- Étienne Mollier <emollier@debian.org>  Tue, 20 Jun 2023 21:03:42 +0200

gffread (0.12.7-3) unstable; urgency=medium

  * Fix watch file
  * Standards-Version: 4.6.1 (routine-update)

 -- Andreas Tille <tille@debian.org>  Fri, 18 Nov 2022 12:14:12 +0100

gffread (0.12.7-2) unstable; urgency=medium

  * Rebuild against new libgclib

 -- Andreas Tille <tille@debian.org>  Fri, 03 Dec 2021 11:37:16 +0100

gffread (0.12.7-1) unstable; urgency=medium

  [ Andreas Tille ]
  * New upstream version
  * Fix watchfile to detect new versions on github
  * New upstream version
  * Standards-Version: 4.6.0 (routine-update)
  * Autopkgtest: Restrictions: allow-stderr

  [ Michael R. Crusoe ]
  * debian/watch: rename downloaded file into something sensible

 -- Andreas Tille <tille@debian.org>  Wed, 13 Oct 2021 17:11:28 +0200

gffread (0.12.1-4) unstable; urgency=medium

  * Team upload.
  * Skip some new AUGUSTUS GTFs that are likely bad, causing autopkgtests to
    fail.

 -- Sascha Steinbiss <satta@debian.org>  Fri, 08 Jan 2021 08:52:52 +0100

gffread (0.12.1-3) unstable; urgency=medium

  * Team upload
  * Fix a typo in ppc64el autopkgtest

 -- Graham Inggs <ginggs@debian.org>  Sun, 06 Dec 2020 06:09:58 +0000

gffread (0.12.1-2) unstable; urgency=medium

  * Team upload
  * Skip two failing tests from gff2aplot that were not run
    previously due to being compressed (Closes: #962553)
  * Adjust autopkgtest dependencies for various architectures
  * Bump Standards-Version to 4.5.1, no changes

 -- Graham Inggs <ginggs@debian.org>  Sat, 05 Dec 2020 23:56:29 +0000

gffread (0.12.1-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * debhelper-compat 13 (routine-update)
  * Build-depends on newer version of libgclib.
  * Don't depend on creating a checkout of gclib during build
  * Added myself to uploaders.

 -- Steffen Moeller <moeller@debian.org>  Sat, 08 Aug 2020 22:51:47 +0200

gffread (0.11.8-1) unstable; urgency=medium

  * Adjust the autopkgtests to exclude the spades dependency on !amd64
  * New upstream version
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
    Repository-Browse.

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Fri, 03 Apr 2020 11:43:09 +0200

gffread (0.11.7-2) unstable; urgency=medium

  [ Steffen Moeller ]
  * Standards-Version: 4.5.0

  [ Michael R. Crusoe ]
  * debian/tests/run-tests: s/ADTTMP/AUTOPKGTEST_TMP/g
  * Explicity depend on the newer libgclib-dev

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Fri, 14 Feb 2020 14:22:24 +0100

gffread (0.11.7-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Standards-Version: 4.5.0

 -- Steffen Moeller <moeller@debian.org>  Mon, 27 Jan 2020 11:04:06 +0100

gffread (0.11.6-1) unstable; urgency=medium

  * Another test exemption from rtracklayer
  * New upstream version
  * Set upstream metadata fields: Repository.
  * Remove obsolete fields Name from debian/upstream/metadata.

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Thu, 07 Nov 2019 13:58:28 +0100

gffread (0.11.5-1) unstable; urgency=medium

  * Team upload.
  * New upstream release.
  * Add breaks/replaces on cufflinks (<< 2.2.1+dfsg.1-4). (Closes: #940915)
  * Set upstream metadata fields: Name.
  * Add autopkgtest

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Wed, 25 Sep 2019 12:50:00 +0200

gffread (0.11.4-2) unstable; urgency=medium

  [ Helmut Grohne ]
  * Fix FTCBFS: Pass LINKER to make. (Closes: #940692)

 -- Andreas Tille <tille@debian.org>  Thu, 19 Sep 2019 11:58:41 +0200

gffread (0.11.4-1) unstable; urgency=medium

  * New upstream version
  * debhelper-compat 12
  * Standards-Version: 4.4.0

 -- Andreas Tille <tille@debian.org>  Thu, 08 Aug 2019 11:54:09 +0200

gffread (0.11.2-1) unstable; urgency=medium

  * Initial release (Closes: #930545)

 -- Andreas Tille <tille@debian.org>  Sat, 15 Jun 2019 00:51:54 +0200
