// clang-format off
/* ----------------------------------------------------------------------
   LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
   https://www.lammps.org/, Sandia National Laboratories
   Steve Plimpton, sjplimp@sandia.gov

   Copyright (2003) Sandia Corporation.  Under the terms of Contract
   DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains
   certain rights in this software.  This software is distributed under
   the GNU General Public License.

   See the README file in the top-level LAMMPS directory.
------------------------------------------------------------------------- */

/* ----------------------------------------------------------------------
   Contributing author: Ganga P Purja Pun (George Mason University, Fairfax)
------------------------------------------------------------------------- */

#include "pair_tersoff_mod_c.h"

#include "comm.h"
#include "error.h"
#include "memory.h"
#include "potential_file_reader.h"
#include "tokenizer.h"

#include <cmath>
#include <cstring>

using namespace LAMMPS_NS;

#define DELTA 4

/* ---------------------------------------------------------------------- */

void PairTersoffMODC::read_file(char *file)
{
  memory->sfree(params);
  params = nullptr;
  nparams = maxparam = 0;

  // open file on proc 0

  if (comm->me == 0) {
    PotentialFileReader reader(lmp, file, "tersoff/mod/c", unit_convert_flag);
    char * line;

    // transparently convert units for supported conversions

    int unit_convert = reader.get_unit_convert();
    double conversion_factor = utils::get_conversion_factor(utils::ENERGY,
                                                            unit_convert);
    while ((line = reader.next_line(NPARAMS_PER_LINE))) {
      try {
        ValueTokenizer values(line);

        std::string iname = values.next_string();
        std::string jname = values.next_string();
        std::string kname = values.next_string();

        // ielement,jelement,kelement = 1st args
        // if all 3 args are in element list, then parse this line
        // else skip to next entry in file
        int ielement, jelement, kelement;

        for (ielement = 0; ielement < nelements; ielement++)
          if (iname == elements[ielement]) break;
        if (ielement == nelements) continue;
        for (jelement = 0; jelement < nelements; jelement++)
          if (jname == elements[jelement]) break;
        if (jelement == nelements) continue;
        for (kelement = 0; kelement < nelements; kelement++)
          if (kname == elements[kelement]) break;
        if (kelement == nelements) continue;


        // load up parameter settings and error check their values

        if (nparams == maxparam) {
          maxparam += DELTA;
          params = (Param *) memory->srealloc(params,maxparam*sizeof(Param),
                                              "pair:params");

          // make certain all addional allocated storage is initialized
          // to avoid false positives when checking with valgrind

          memset(params + nparams, 0, DELTA*sizeof(Param));
        }

        params[nparams].ielement = ielement;
        params[nparams].jelement = jelement;
        params[nparams].kelement = kelement;
        params[nparams].powerm     = values.next_double();
        params[nparams].lam3       = values.next_double();
        params[nparams].h          = values.next_double();
        params[nparams].powern     = values.next_double();
        params[nparams].beta       = values.next_double();
        params[nparams].lam2       = values.next_double();
        params[nparams].bigb       = values.next_double();
        params[nparams].bigr       = values.next_double();
        params[nparams].bigd       = values.next_double();
        params[nparams].lam1       = values.next_double();
        params[nparams].biga       = values.next_double();
        params[nparams].powern_del = values.next_double();
        params[nparams].c1         = values.next_double();
        params[nparams].c2         = values.next_double();
        params[nparams].c3         = values.next_double();
        params[nparams].c4         = values.next_double();
        params[nparams].c5         = values.next_double();
        params[nparams].c0         = values.next_double();
        params[nparams].powermint = int(params[nparams].powerm);

        if (unit_convert) {
          params[nparams].biga *= conversion_factor;
          params[nparams].bigb *= conversion_factor;
          params[nparams].c0   *= conversion_factor;
        }
      } catch (TokenizerException &e) {
        error->one(FLERR, e.what());
      }

      // currently only allow m exponent of 1 or 3
      if (
        params[nparams].powern < 0.0 ||
        params[nparams].beta < 0.0 ||
        params[nparams].lam2 < 0.0 ||
        params[nparams].bigb < 0.0 ||
        params[nparams].bigr < 0.0 ||
        params[nparams].bigd < 0.0 ||
        params[nparams].bigd > params[nparams].bigr ||
        params[nparams].lam1 < 0.0 ||
        params[nparams].biga < 0.0 ||
        params[nparams].powerm - params[nparams].powermint != 0.0 ||
        (params[nparams].powermint != 3 &&
        params[nparams].powermint != 1)
        )
        error->one(FLERR,"Illegal Tersoff parameter");

      nparams++;
    }
  }

  MPI_Bcast(&nparams, 1, MPI_INT, 0, world);
  MPI_Bcast(&maxparam, 1, MPI_INT, 0, world);

  if (comm->me != 0) {
    params = (Param *) memory->srealloc(params,maxparam*sizeof(Param), "pair:params");
  }

  MPI_Bcast(params, maxparam*sizeof(Param), MPI_BYTE, 0, world);
}

/* ---------------------------------------------------------------------- */

void PairTersoffMODC::repulsive(Param *param, double rsq, double &fforce,
                                int eflag, double &eng)
{
  double r,tmp_fc,tmp_fc_d,tmp_exp;

  r = sqrt(rsq);
  tmp_fc = ters_fc(r,param);
  tmp_fc_d = ters_fc_d(r,param);
  tmp_exp = exp(-param->lam1 * r);
  fforce = -param->biga * tmp_exp * (tmp_fc_d - tmp_fc * param->lam1) / r - param->c0 * tmp_fc_d / r;
  if (eflag) eng = tmp_fc * param->biga * tmp_exp + param->c0 * tmp_fc;
}

