-4	Unclassified
-3	Low complexity
-2	Not assigned
-1	No hits
1	SEED-2021
2	Carbohydrates
13	Photosynthesis
107	Sulfur Metabolism
121	Stress Response
274	Motility and Chemotaxis
293	Secondary Metabolism
421	Amino Acids and Derivatives
449	Nitrogen Metabolism
604	Fatty Acids, Lipids, and Isoprenoids
613	Acyl carrier protein
667	Nucleosides and Nucleotides
912	Metabolism of Aromatic Compounds
991	Protein degradation
1077	Membrane Transport
1388	Respiration
1669	Miscellaneous
1905	Universal stress protein family
2597	Regulation And Cell Signaling
4927	Hydrogenases
6426	Exosome
6517	Nucleoside triphosphate pyrophosphohydrolase MazG
7132	Flagellum
8522	Integrons
8981	Archease
10225	D-tyrosyl-tRNA(Tyr) deacylase
10268	Carotenoids
10608	Iron acquisition and metabolism
10924	Isoprenoid Biosynthesis: Interconversions
11089	Coenzyme PQQ synthesis
11177	Siderophore pyochelin
11182	Phosphoenolpyruvate phosphomutase
11187	Phospholipid and Fatty acid biosynthesis related cluster
11288	Type 4 secretion and conjugative transfer
11305	Plasmid replication
11361	Signal peptidase
11362	Phenazine biosynthesis
11377	tRNA aminoacylation, His
11396	Vibrioferrin synthesis
11425	Vanillate and syringate utilization
11554	Chlorophyll Biosynthesis in plants and prokaryotes
11612	Poly-gamma-glutamate biosynthesis
11740	Hydroxyaromatic decarboxylase family
11818	Siderophore Staphylobactin
11819	DNA repair, UvrABC system
11884	Molybdopterin cytosine dinucleotide
11951	Hyperosmotic potassium uptake
11959	Sporulation Cluster III A
11960	Purine nucleotide synthesis regulator
11994	Nudix proteins (nucleoside triphosphate hydrolases)
11997	Protection from Reactive Oxygen Species
12050	Phenylacetyl-CoA catabolic pathway (core)
12096	Glutathione: Non-redox reactions
12099	Muconate lactonizing enzyme family
12122	Malonate decarboxylase
12153	Pentose phosphate pathway
12166	Sugar-phosphate stress regulation
12225	Bacillibactin Siderophore
12248	Coenzyme F420 synthesis
12294	Carbon storage regulator
12409	Peptidyl-prolyl cis-trans isomerase
12427	MukBEF Chromosome Condensation
12428	DNA Repair Base Excision
12430	Tricarballylate Utilization
12445	tRNA aminoacylation, Phe
12511	DNA repair, bacterial UmuCD system
12538	Translation elongation factor G family
12568	Hfl operon
12645	Siderophore Desferrioxamine E
12717	Mycobacterial gene cluster associated with resistance against FAS-II antibiotics
12764	Fatty Acid Biosynthesis FASII
12803	Amino acid racemase
12810	Putative TldE-TldD proteolytic complex
12835	Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate
13011	Entner-Doudoroff Pathway
13033	Glycerolipid and Glycerophospholipid Metabolism in Bacteria
13034	Branched-Chain Amino Acid Biosynthesis
13067	Folate Biosynthesis
13079	Selenocysteine metabolism
13088	Type 4 conjugative transfer system, IncI1 type
13105	Aromatic amino acid interconversions with aryl acids
13108	DNA topoisomerases, Type II, ATP-dependent
13109	YrdC-YciO-Sua5 and associated protein families
13116	tRNA aminoacylation, Ile
13117	Fe-S cluster assembly
13148	Peptide ABC transport system Sap
13188	Menaquinone biosynthesis from chorismate via 1,4-dihydroxy-2-naphthoate
13223	Glycogen metabolism
13247	Siderophore Pyoverdine
13272	ATP-dependent RNA helicases, bacterial
13310	Molybdenum cofactor biosynthesis
13314	D-Galacturonate and D-Glucuronate Utilization
13374	Head-to-head olefinic hydrocarbon biosynthesis
13406	Glycolysis and Gluconeogenesis
13414	Adhesins in Staphylococcus
13423	DNA repair, bacterial
13460	Acetoin, butanediol metabolism
13475	tRNA aminoacylation, Thr
13480	Stringent Response, (p)ppGpp metabolism
13612	Pyridoxin(Vitamin B6) Degradation Pathway
13661	Biotin synthesis & utilization
13676	Respiratory Complex I
13701	Acetone carboxylase
13796	Methylglyoxal Metabolism
13801	tRNA aminoacylation, Trp
13820	Acyl-CoA thioesterase II
13836	Dehydrogenase complexes
13851	Heme, hemin uptake and utilization systems in GramPositives
13856	Cyanate hydrolysis
13866	Threonine anaerobic catabolism gene cluster
13934	CytR regulation
13936	Glutamate dehydrogenases
13972	Glycine reductase, sarcosine reductase and betaine reductase
13985	L-fucose utilization
13986	Nonmevalonate Branch of Isoprenoid Biosynthesis
14008	tRNA aminoacylation, Gly
14035	Formaldehyde assimilation: Ribulose monophosphate pathway
14044	IbrA and IbrB: co-activators of prophage gene expression
14063	tRNA aminoacylation, Met
14112	Pyrroloquinoline Quinone biosynthesis
14126	Protein chaperones
14166	Lipid-linked oligosaccharide synthesis related cluster
14192	Pyruvate Alanine Serine Interconversions
14248	SpoVS protein family
14332	Polyunsaturated Fatty Acids synthesis
14345	Histidine Degradation
14371	Photorespiration (oxidative C2 cycle)
14372	Sarcosine oxidases, monomeric and heterotetrameric
14417	Cyanophycin Metabolism
14423	HPr catabolite repression system
14463	Arsenic resistance
14470	tRNA aminoacylation, Ser
14474	DNA processing cluster
14483	BactLuciferaseComplex
14547	Siderophore assembly kit
14587	Alpha-acetolactate operon
14589	Carbon monoxide induced hydrogenase
14592	Fermentations: Mixed acid
14617	Phosphonate metabolism
14680	Lactose utilization
14795	Osmoregulation
14802	Glutathione: Biosynthesis and gamma-glutamyl cycle
14819	Toxin co-regulated pilus
14848	Selenoprotein O
14892	Glutathione: Redox cycle
14895	Autoinducer 2 (AI-2) transport and processing (lsrACDBFGE operon)
14909	Phenol hydroxylase
15014	tRNA aminoacylation, Val
15017	ABC transporter tungstate (TC 3.A.1.6.2)
15028	Streptococcal Hyaluronic Acid Capsule
15029	Inositol catabolism
15031	Adenosyl nucleosidases
15067	Ribosomal protein S5p acylation
15087	Mycobacterial FadE proteins Acyl-CoA dehydrogenase
15232	Siderophore Enterobactin
15256	Menaquinone biosynthesis from chorismate via 1,4-dihydroxy-6-naphthoate
15579	Predicted secretion system X
15604	Bacterial light-harvesting proteins
15615	Colicin V and Bacteriocin Production Cluster
15624	tRNA splicing
15625	Lysine fermentation
15691	Outer membrane
15750	Trans-translation by stalled ribosomes
15764	Chlorophyll Degradation
15778	G-protein-coupled receptor (GPCR) system in Actinobacteria
15797	Listeria Pathogenicity Island LIPI-1 extended
15810	tRNA aminoacylation, Cys
15950	Proteorhodopsin
15970	tRNA aminoacylation, Ala
15988	Proline Synthesis
15996	A Hypothetical Protein Related to Proline Metabolism
15997	DNA repair, bacterial UvrD and related helicases
16001	Periplasmic disulfide interchange
16013	Pyruvate:ferredoxin oxidoreductase
16022	Macromolecular synthesis operon
16084	Histidine Biosynthesis
16097	Cadmium resistance
16116	Dissimilatory nitrite reductase
16122	Pyridoxin (Vitamin B6) Biosynthesis
16123	Quinone oxidoreductase family
16136	ESAT-6 proteins secretion system in Mycobacteria (locus ESX-1)
16214	Sporulation Cluster
16234	Ribonuclease H
16235	Biogenesis of cytochrome c oxidases
16265	Listeria surface proteins: Internalin-like proteins
16266	Ribonucleotide reduction
16267	Biofilm formation in Staphylococcus
16319	Prenylated indole derivatives in actinomycetes
16326	Osmotic stress cluster
16329	Metabolite repair
16372	SecY2-SecA2 Specialized Transport System
16419	Tryptophan synthesis
16473	Amidase clustered with urea and nitrile hydratase functions
16534	Mycolic acid synthesis 2
16567	Betaine biosynthesis from glycine
16586	Putative oxidase COG2907
16603	DNA recombination, archaeal
16625	2-O-alpha-mannosyl-D-glycerate utilization
16634	p-Aminobenzoyl-Glutamate Utilization
16689	Universal GTPases
16726	Salmochelin-mediated Iron Acquisition
16737	RNA processing and degradation, bacterial
16878	Ubiquinone biosynthesis
16943	DNA repair, bacterial RecFOR pathway
16973	Glyoxylate bypass
16989	Diphthamide biosynthesis
17010	ABC-type iron transport system
17079	Central Metabolism
17122	Accessory colonization factor
17136	Glycerol fermentation to 1,3-propanediol
17145	Type IV pilus
17150	Cyanobacterial bypass in the TCA
17173	Murein hydrolase regulation and cell death
17192	Peptide methionine sulfoxide reductase
17253	Propanediol utilization
17294	Widespread colonization island
17309	ABC transporter of unknown substrate X
17310	Two cell division clusters relating to chromosome partitioning
17311	Na(+) H(+) antiporter
17405	Ethylmalonyl-CoA pathway of C2 assimilation
17409	Spore germination
17410	Cobalamin synthesis
17433	Methionine Salvage
17513	MazEF toxin-antitoxing (programmed cell death) system
17532	Nitrilase
17581	Lipoic acid metabolism
17584	Phd-Doc, YdcE-YdcD toxin-antitoxin (programmed cell death) systems
17600	Methylthiotransferases
17639	Biofilm Adhesin Biosynthesis
17689	Adaptation to d-cysteine
17698	Formate dehydrogenase
17719	tRNA aminoacylation, Leu
17729	tRNA nucleotidyltransferase
17730	Cytolysin and Lipase operon in Vibrio
17741	Polyamine Metabolism
17851	2-phosphoglycolate salvage
17875	De Novo Pyrimidine Synthesis
17876	KDO2-Lipid A biosynthesis
17888	Ferrous iron transporter EfeUOB, low-pH-induced
17897	Glycolate, glyoxylate interconversions
17926	Siderophore Achromobactin
17967	Tricarboxylate transport system
18029	Type III secretion system orphans
18030	tRNA aminoacylation, Arg
18039	Twin-arginine translocation system
18045	Fermentations: Lactate
18049	Two partner secretion pathway (TPS)
18078	NAD and NADP cofactor biosynthesis global
18171	Conjugative transposon, Bacteroidales
18233	Copper homeostasis: copper tolerance
18235	Sporulation gene orphans
18263	Phosphate Metabolism
18264	Soluble methane monooxygenase (sMMO)
18281	Photosystem II
18323	Indole-pyruvate oxidoreductase complex
18324	ATP-dependent Nuclease
18340	Cell envelope-associated LytR-CpsA-Psr transcriptional attenuators
18355	Anthrose Biosynthesis
18556	Iron siderophore sensor & receptor system
18587	Chitobiose
18591	General Secretion Pathway
18622	Resistance to chromium compounds
18673	Glycine cleavage system
18737	Proteasome bacterial
18738	DNA repair, bacterial photolyase
18745	Toxin-antitoxin replicon stabilization systems
18748	V-Type ATP synthase
18767	Iron acquisition in Streptococcus
18789	Ribosomal proteins, zinc requirement
18825	Glutathione-dependent pathway of formaldehyde detoxification
18843	Biogenesis of c-type cytochromes
18850	Cholera toxin
18854	Fosfomycin resistance
18876	Sulfate reduction-associated complexes
18885	Trans-envelope signaling system VreARI in Pseudomonas
18911	Ergothioneine biosynthesis
18913	Mycobacterial cell wall virulence lipid phthiocerol dimycocerosate (PDIM)
18937	tRNA aminoacylation, Lys
19042	RecA and RecX
19043	Threonylcarbamoyladenosine
19151	Sporulation-associated proteins with broader functions
19156	D-gluconate and ketogluconates metabolism
19194	Tetrathionate respiration
19220	Thiamin
19232	Programmed frameshift
19251	Quorum sensing in Yersinia
19348	DNA repair, bacterial RecBCD pathway
19360	F0F1-type ATP synthase
19367	Multiple Antibiotic Resistance MAR locus
19463	Mycobacterial FadD proteins (fatty acid CoA- and AMP- ligases)
19512	DNA repair, bacterial DinG and relatives
19513	Exosporium
19557	Acetophenone carboxylase 1
19558	DNA Helicase of Unknown Function
19564	HMG CoA Synthesis
19593	Lipopolysaccharide-related cluster in Alphaproteobacteria
19602	Sex pheromones in Enterococcus faecalis and other Firmicutes
19603	Bacteroides capsular polysaccharide transcription antitermination proteins
19623	Ribosomal protein S12p Asp methylthiotransferase
19624	Siderophore Aerobactin
19652	Proline, 4-hydroxyproline uptake and utilization
19680	NiFe hydrogenase maturation
19682	Ribosome activity modulation
19683	Calvin-Benson cycle
19897	Photosystem II-type photosynthetic reaction center
19898	RuvABC plus a hypothetical
19905	Anaerobic Oxidative Degradation of L-Ornithine
19943	Glutathionylspermidine and Trypanothione
19982	Biogenesis of cbb3-type cytochrome c oxidases
20075	tRNA aminoacylation, Tyr
20172	Glycolysis and Gluconeogenesis, including Archaeal enzymes
20206	Modification of eukaryotic initiation factor 5A
20234	Inclusion membrane proteins supporting intracellular life styles in Chlamydiales
20381	Ethanolamine utilization
20455	Dihydroxyacetone kinases
20479	L-ascorbate utilization (and related gene clusters)
20566	Bacterial pathways for dimethylsulfoniopropionate and acrylate catabolism
20587	Gallic acid utilization
20622	Biotin biosynthesis
20632	Heat shock dnaK gene cluster extended
20707	Pyruvate metabolism I: anaplerotic reactions, PEP
20714	Iron(III) dicitrate transport system Fec
20741	D-glucosaminate utilization
20748	Cytolethal distending toxins
20757	Late competence
20784	Nitrogen fixation
20802	Urease subunits
20805	High affinity phosphate transporter and control of PHO regulon
20830	Alkane synthesis in bacteria 2
20832	Tagatose utilization
20855	Glutamine synthetases
20858	Dipicolinate Synthesis
20866	One-carbon metabolism by tetrahydropterines
20873	Control of cell elongation - division cycle in Bacilli
20907	Betaine lipids in bactera
20942	TCA Cycle
20985	Transcription elongation factors, archaeal
21009	Mycobacterial HadABC proteins ((3R)-hydroxyacyl-ACP dehydrates of FASII)
21047	Chorismate Synthesis
21057	Glutathione analogs: mycothiol
21086	dTDP-rhamnose synthesis
21094	2-aminophenol Metabolism
21105	Biosynthesis of Arabinogalactan in Mycobacteria
21129	Cob(I)alamin adenosyltransferase
21132	DAP (1,3-diaminopropane) production
21149	Galactosamine Substituent of Arabinogalactan in Mycobacteria
21150	Glutaconate CoA-transferase or 3-oxoadipate CoA-transferase Subunits
21156	Heme and heme d1 biosynthesis from siroheme
21192	Metabolite damage and its repair or mitigation
21216	tRNA aminoacylation, Pro
22889	Metabolism
22890	Branched-chain amino acids
22891	Carbonic anhydrase
22892	Arginine; urea cycle, creatine, polyamines
22893	Arginine biosynthesis via N-acetyl-L-citrulline
22894	Proline and 4-hydroxyproline
22895	Proline biosynthesis (for review)
22896	Energy
22897	Energy and Precursor Metabolites Generation
22898	RNA Processing
22899	RNA processing and modification
22900	ATP synthases
22901	DNA Processing
22902	DNA repair
22903	Clustering-based subsystems
22904	Cell Division
22905	Cell division related cluster
22906	Protein Processing
22907	Protein Fate (folding, modification, targeting, degradation)
22908	Protein processing and modification
22909	Cellular Processes
22910	Cell Cycle, Cell Division and Death
22911	Cell division cluster
22912	Protein folding
22913	Chaperones GroEL GroES and Thermosome
22914	Stress Response, Defense, Virulence
22915	Stress Response, Defense and Virulence
22916	Stress Response: Heat/cold shock
22917	Cell Envelope
22918	Cell Envelope, Capsule and Slime layer
22919	Gram-Negative (Diderm) cell wall components
22920	Electron donating reactions
22921	NADH ubiquinone oxidoreductase
22922	NADH ubiquinone oxidoreductase vs. multi-subunit cation antiporter
22923	Programmed Cell Death and Toxin-antitoxin Systems
22924	Toxin-Antitoxin system HigAB
22925	Cofactors, Vitamins, Prosthetic Groups
22926	Tetrapyrroles
22927	Pyrimidines
22928	Lysine Biosynthesis
22929	Peptidase clustering with DAP
22930	Lysine, threonine, methionine, and cysteine
22931	"Diaminopimelate Synthesis "
22932	Lysine DAP biosynthetic pathway
22933	Bacterial checkpoint-control-related cluster
22934	Biotin
22935	Fatty acids
22936	Protein Synthesis
22937	Ribosome biogenesis
22938	Ribosomal proteins, single-copy
22939	Translation
22940	Translation elongation factors, bacterial
22941	Translation termination factors, bacterial
22942	Phospholipids
22943	Isoprenoids
22944	Resistance to antibiotics and toxic compounds
22945	Antibiotic targets in metabolic pathways
22946	Aminoacyl-tRNA-synthetases
22947	Aromatic amino acids and derivatives
22948	Pyridoxine
22949	DNA repair system including RecA, MutS and a hypothetical protein
22950	DNA uptake, competence
22951	DNA internalization-related cluster
22952	Bacterial cell division related cluster 2
22953	DNA replication
22954	Antibiotic targets in DNA processing
22955	5-methylaminomethyl-2-thiouridine
22956	Transcription
22957	RNA polymerase, bacterial
22958	Translation initiation factors, bacterial
22959	Antibiotic targets in protein synthesis
22960	Cysteine synthesis
22961	Chemotaxis in Escherichia coli and Bacillus subtilis
22962	Riboflavin, FMN, FAD
22963	Riboflavin, FMN and FAD metabolism with fusion events
22964	Anaerobic module of TCA
22965	Cell division initiation related cluster
22966	C-1 compound metabolism
22967	Folate and pterines
22968	Phenylalanine and Tyrosine synthesis 1
22969	Histidine Metabolism
22970	Damaged nicotinamide nucleotide NAD(P)HX repair
22971	RNA pseudouridine synthases
22972	Cation transporters
22973	Magnesium transport
22974	Purines
22975	DeNovo Purine Biosynthesis
22976	Lipoic acid
22977	"2-oxoglutarate dehydrogenase "
22978	Lipoylated proteins
22979	S-Adenosyl-L-homocysteine recycling
22980	Prophages, Transposable elements, Plasmids
22981	Pathogenicity islands
22982	Host-pathogen interactions
22983	Hydrolysis of sphingomyelin
22984	Biogenesis of respiratory chain components
22985	Fermentation
22986	Acetolactate synthase subunits
22987	Glutamine, glutamate, aspartate, asparagine; ammonia assimilation
22988	Di- and oligosaccharides
22989	Galactose utilization
22990	Quinone cofactors
22991	Monosaccharides
22992	GDP-fucose to mannose-1P module
22993	Capsule and Slime layer
22994	O-methyl phosphoramidate modification in capsular polysaccharide
22995	Copper transport and blue copper proteins
22996	Aerotolerance operon
22997	Heme Biosynthesis: protoporphyrin-, coproporphyrin- and siroheme-dependent pathways
22998	Metal chelatases
22999	CO2 fixation
23000	Methylenetetrahydrofolate reductase
23001	Aspartate to Homoserine module
23002	Aspartate to Threonine Module
23003	DNA recombination
23004	Stationary phase, Dormancy, Persistence
23005	Ribosomal hibernation related cluster
23006	Polysaccharides
23007	Folate biosynthesis cluster
23008	Prokaryotic cell type differentiation
23009	Sporulation
23010	tRNA aminoacylation, Gln
23011	tRNA aminoacylation, Glu
23012	Heme O and Heme A biosynthesis
23013	Heme O and Heme A biosynthesis (with selected terminal oxidases)
23014	tRNA aminoacylation, Asn
23015	Lpt lipopolysaccharide transport system
23016	DNA repair, bacterial MutHLS system
23017	Replication-associated recombination protein RarA
23018	Coenzyme A
23019	Coenzyme A Biosynthesis cluster
23020	Peptidoglycan (Bacteria) or other polymers (Archaea)
23021	Undecaprenyl-diphosphatases
23022	Lipopolysaccharide transporter LptABC
23023	Antibiotic targets in cell wall biosynthesis
23024	Queuosine and archaeosine
23025	GMP synthase
23026	IMP and Xanthine conversion to XMP and GMP module
23027	Lipoprotein transporter to outer membrane Lol
23028	Alanine, serine, and glycine
23029	D-3-phosphoglycerate to phosphoserine module
23030	Polyadenylation, bacterial
23031	Trk and Ktr potassium uptake systems
23032	Succinate dehydrogenase and Fumarate reductase cpmlexes
23033	Thiamin, thiazole, hydroxymethylpyrimidine salvage and uptake
23034	Biotin synthesis cluster
23035	Stress Response: Osmotic stress
23036	Resistance to Daptomycin
23037	Antibiotic targets in transcription
23038	DNA repair, bacterial SbcCD exonuclease
23039	Cobalamin synthesis from Cob(II)yrinate a,c diamide
23040	Potassium-transporting ATPase
23041	Cardiolipin biosynthesis
23042	Copper Transport System
23043	ABC transporters
23044	Efflux ABC transporter YadGH
23045	Toxin-Antitoxin MT1
23046	tRNA aminoacylation, Asp
23047	Cobalamin synthesis, Precorin-2 to Cob(II)yrinate a,c diamide, anaerobic
23048	Protein targeting, sorting, translocation
23049	"Amino sugars and nucleotide sugars "
23050	CMP-legionaminic acid synthesis
23051	Ribosome LSU, bacterial
23052	Type I restriction-modification systems
23053	Ribosomally-synthesized post-translationally modified peptides (RiPPs)
23054	Tolerance to colicin E2 and CreBC signal transduction system
23055	Fatty acid synthesis
23056	Betaine, crotonobetaine, L-carnitine (trimethyl ammonium compounds)
23057	Carnitine metabolism and transport
23058	Multidrug efflux systems
23059	Tripartite multidrug efflux systems (of RND type) in Pseudomonas
23060	Multidrug Resistance, Tripartite Systems Found in Gram Negative Bacteria TEMP
23061	Tripartite multidrug efflux systems (of MFS type) in Gram-negative bacteria
23062	Cobalamin synthesis, Precorin-2 to Cob(II)yrinate a,c diamide, aerobic
23063	Protein secretion system, Type I
23064	Type I secretion systems disambiguation
23065	NAD and NADP
23066	NAD and NADP cofactor biosynthesis bacterial
23067	Protein and nucleoprotein secretion system, Type IV
23068	Fusaric acid resistance cluster
23069	Cold shock proteins of CSP family
23070	Multidrug resistance RND efflux system MexEFOprN
23071	Protein secretion system, Type VI
23072	Type VI secretion system
23073	Homoprotocatechuate degradative cluster
23074	Putrescine utilization
23075	Siderophores
23076	Nucleoside uptake and degradation cluster
23077	Aminoglycoside modifying enzymes: O-phosphotransferases
23078	Nickel-requiring
23079	Inner membrane proteins of MarC family, not involved in antibiotic resistance
23080	Threonine synthase cluster
23081	Cysteine dioxygenase containing cluster 1
23082	Tol-Pal Cell Envelope Complex
23083	Polymyxin resistance
23084	Electron accepting reactions
23085	Cytochrome c oxidase EC 1.9.3.1
23086	Protein secretion system, Type II
23087	Fatty Acid Biosynthesis cluster
23088	Choline uptake and conversion to betaine clusters
23089	Glycine betaine synthesis from choline
23090	Phages, Prophages
23091	Possible RNA modification and stress response cluster
23092	TonB-ExbBD energy transducing system
23093	TAM transport system
23094	Enoyl-[ACP] reductases disambiguation
23095	Resistance to Triclosan
23096	"Cytochrome bo ubiquinol oxidase "
23097	BtuS-PduT gene cluster for metalloporphyrine salvage
23098	Shikimate kinase SK3 cluster
23099	Extracellular matrix proteins (PEL) involved in glucose-rich biofilm formation in Pseudomonas
23100	Urea carboxylase and Allophanate hydrolase cluster
23101	Selenoproteins
23102	FtsEX cell-division-associated signaling system
23103	beta-Barrel Assembly Machinery
23104	MexXY System of Pseudomonas aeruginosa
23105	Sodium Ion-Coupled Energetics
23106	Na-translocating NADH-quinone oxidoreductase
23107	Stress proteins YciF, YciE
23108	Cluster containing Glutathione synthetase
23109	Arginine succinyltransferase pathway
23110	Maintenance of outer membrane lipid asymmetry
23111	Two-component regulatory systems
23112	BarA-UvrY(SirA) two-component regulatory system
23113	Purine catabolism in Bacillus subtilis
23114	Xanthine dehydrogenase subunits
23115	Biosynthesis of antimicrobial or antitumor compounds
23116	L-2-amino-4-methoxy-trans-3-butenoic acid synthesis
23117	Cell division related cluster including coaD
23118	Uni- Sym- and Antiporters
23119	NhaA, NhaD and Sodium-dependent phosphate transporters
23120	Microbial communities
23121	Quorum sensing and biofilm formation
23122	Unsaturated fatty acids
23123	Delta(6)-desaturase containing cluster
23124	Tripartite multidrug efflux systems (of MFS type) EmrKY-TolC and EmrAB-TolC
23125	Fatty acid catabolic operon fadN-fadA-fadE (yusJKL)
23126	Sulfur transfer pathway CsdAEL
23127	Protein secretion system, Type III
23128	Type III secretion systems
23129	L-serine dehydratase subunits
23130	Sulfate assimilation related cluster
23131	Adenylylsulfate reductase
23132	Lipid orphans
23133	Phosphonate and phosphinate
23134	Extracellular matrix proteins (PSL) involved in mannose-rich biofilm formation in Pseudomonas
23135	Dpp dipeptide ABC transport system
23136	Repair of Iron Centers
23137	Tripartite multidrug efflux systems (of RND type) MdtABC-TolC
23138	Protein secretion system
23139	tRNA modification, 5-oxyacetyl uridine (cmo5U34)
23140	EnvZ and OmpR regulon
23141	Acyclic terpene utilization
23142	Outer membrane porins in Pseudomonas and Acinetobacter
23143	Cytochrome d ubiquinol oxidase operon
23144	Beta-lactamases Ambler class C
23145	Beta-lactamases Ambler class D
23146	Glycyl-tRNA synthetase
23147	Dihydropyrimidine dehydrogenase
23148	Uridine to beta-Alanine and Thymine to 3-aminoisobutanoate module
23149	Periplasmic nitrate reductase EC 1.7.99.4
23150	Efflux ABC transporters BmrCD and LmrCD involved in multidrug resistance
23151	Gram-Positive (Monoderm) cell wall components
23152	D-alanylation of teichoic acid
23153	Fe-S clusters
23154	Mevalonate metabolic pathway
23155	Tetracycline resistance, all mechanisms
23156	Ribonuclease J family
23157	Lipoylation-related cluster
23158	Invasion and intracellular resistance
23159	VraTSR and LiaFSR three-component regulatory systems
23160	CtsR and MscAB regulation of protein degradation
23161	EcsAB transporter affecting expression and secretion of secretory preproteins
23162	mRNA 3-end processing factor containing cluster
23163	Multi-subunit cation antiporter
23164	Acetylation_deacetylation
23165	Post-translational modification of proteins
23166	Resistance to Ethionamide and Isoniazid
23167	Steroids and Hopanoids
23168	Hopanoid biosynthesis
23169	Anaerobic dimethyl sulfoxide reductase (EC 1.8.5.3)
23170	GlrKR two-component regulatory system
23171	Denitrifying reductase gene clusters
23172	RuBisCO operon
23173	Sugar alcohols
23174	Barnase-barstar complex
23175	A new toxin - antitoxin system
23176	Hydrogen-sensing hydrogenase system
23177	Electron transport and photophosphorylation
23178	Light-harvesting complexes
23179	Tetracycline resistance, ribosomal protection type
23180	S-layer
23181	Wall polysaccharide pyruvylation
23182	Cell wall of Mycobacteria
23183	N-acetylneuraminate utilization
23184	Thiamin, hydroxymethylpyrimidine selected transporters
23185	Carboxylic acids
23186	CoA disulfide thiol-disulfide redox system
23187	Aminoglycoside modifying enzymes: O-nucleotidyltransferases
23188	Efflux ABC transporter MdlAB
23189	Protein secretion system, Type VII
23190	ESAT-6 proteins secretion system in Firmicutes and Actinobacteria
23191	ESAT-6 proteins secretion system in Firmicutes extended
23192	ESAT-6 protein secretion system in Mycobacteria (locus ESX-5)
23193	Aminoglycoside modifying enzymes: N-acetyltransferases
23194	BOX elements in Streptococci
23195	Programmed cell death toxin-antitoxin PezAT
23196	PEB1, the major cell-binding factor of Campylobacter jejuni
23197	Fet iron export system
23198	Hyaluronate utilization
23199	Pyruvate formate-lyase cluster
23200	Streptolysin S
23201	YoeB-YefM toxin-antitoxin system
23202	Hydroxy-fatty acid production as stress response
23203	Adhesion
23204	Stress Response: Electrophile toxicity
23205	Bacillithiol synthesis
23206	Bile hydrolysis
23207	Teicoplanin resistance in Staphylococci
23208	Bacitracin resistance
23209	Resistance to the fluoroquinolones norfloxacin and ciprofloxacin
23210	Siderophore Anthrachelin
23211	Oxygen-sensing two-component regulatory system NreABC
23212	Vir-like type 4 secretion system
23213	ABC transporter YxeMNO
23214	Lysine leader peptide
23215	HU-alpha and dsDNA mimic protein interaction
23216	Toxins and superantigens
23217	Homogentisate pathway
23218	Tripartite multidrug efflux systems (of RND type) AcrAB-TolC and related transporters
23219	Quorum-sensing related cluster
23220	Toxins
23221	Arginine decarboxylase and Agmatinase cluster
23222	Bicyclomycin resistance cluster
23223	Phage shock protein operon
23224	Trimethylamine-N-oxide operon
23225	ABC transporter YeiABEF
23226	Ectoine synthesis
23227	Possible DNA repair related cluster
23228	Cyclic Di-GMP Turnover Proteins
23229	Chloramphenicol resistance
23230	Anaerobic glycerol-3-phosphate dehydrogenase subunits
23231	Glycerol ABC transporter
23232	Ribitol utilization
23233	Histidine Biosynthesis -- gjo
23234	Glycerol utilization cluster
23235	Gene Transfer Agent
23236	Arginine biosynthesis
23237	Fusidic acid resistance
23238	Coenzyme A -- gjo
23239	Ectoine, hydroxyectoine uptake and catabolism
23240	Cluster related to 2-thiouridine modification of tRNAs
23241	Nucleoside ABC transporter cluster
23242	Mupirocin resistance
23243	Experimental Subsystems
23244	CRISPR proteins
23245	The Chv two-component regulatory system
23246	dTDP-rhamnose synthesis -- gjo
23247	Urea cycle
23248	Twin-arginine translocation system related cluster
23249	Branched-chain amino acids and alpha-keto acids utilization as energy sources
23250	Degradation of branched-chain amino acids and alpha-keto acids [Leu, Val]
23251	Sugar acids
23252	D-threonate, L-threonate and D-erythronate utilization
23253	Hydrocarbons
23254	Protein-O-mannosyltransferase and 16S rRNA (cytidine(1402)-2'-O)-methyltransferase cluster
23255	rRNA modification related cluster including tlyA
23256	Copper uptake system CopCD
23257	Beta-lactamases Ambler class A
23258	AttEFGH ABC Transport System
23259	HipAB system implicated in growth arrest, persistence and drug tolerance
23260	Hexose phosphate transport system
23261	Beta-lactamases Ambler class B
23262	Sporulation proteins SigEG cluster
23263	Mycobacterial lipid and multidrug efflux system proteins MmpL, MmpS
23264	Sporulation proteins SpoVA cluster
23265	S-methylmethionine
23266	Macrolides, lincosamides, streptogramins, ketolides, oxazolidinones (MLSKO) resistance: enzymatic degradation
23267	Macrolides, lincosamides, streptogramins, ketolides, oxazolidinones (MLSKO) resistance: efflux systems
23268	Sporulation proteins SpoIIIAA-SpoIIIAH
23269	Spore germinant receptors
23270	Antibiotic anticapsin - bacilysin
23271	Citrate uptake cluster
23272	Macrolides, lincosamides, streptogramins, ketolides, oxazolidinones (MLSKO) resistance: rRNA methylases
23273	Coat proteins CotJABC
23274	Alginate biosynthesis
23275	Conjugative transfer
23276	"Mycobacterial multidrug efflux systems implicated in AMR "
23277	PPE multigene family in Mycobacterium tuberculosis complex (MTBC)
23278	Outer membrane porins in Mycobacteria
23279	Cell invasion-related virulence operon MCE
23280	Isoniazid inductible proteins cluster
23281	Phosphatidylinositol mannosides biosynthesis related cluster
23282	Inositol-containing phospholipids
23283	Cluster related to PAS - para-aminosalicylic acid resistance
23284	Mycobacterial signal transduction system MprAB required for persistent infections
23285	Coenzyme F420
23286	Actinobacterial signal transduction system MtrAB-LpqB
23287	Sulfurtransferase and Ssec cluster
23288	Possible stress related actinobacterial cluster
23289	Possible new toxin-antitoxin system including DivIC
23290	Cholesterol catabolism
23291	Mycofactocin
23292	Mycofactocin system cluster
23293	Mycobacterial lipoproteins (LPR group)
23294	Mycobacterial heme acquisition system
23295	Resistance to Ethambutol
23296	Dioxygenolytic carbon monoxide-forming enzymes
23297	Activation of fatty acids as acyl-adenylates cluster subgroup FadD10
23298	Encapsulation of DyP-type peroxidase or ferritin-like protein oligomers
23299	Siderophore Mycobactin
23300	Glutamate fermentation
23301	Butyrate kinase pathway
23302	Hyaluronic Acid-containing Cell Walls
23303	L-fucose dissimilation cluster
23304	Macrolides, lincosamides, streptogramins, ketolides, oxazolidinones (MLSKO) resistance: ribosomal protection
23305	2-ketoacid oxidoreductases disambiguation
23306	Bacteriocin resistance related cluster
23307	Oligopeptide degradation cluster
23308	Taurine and alkanesulfonate utilization as sulfur sources
23309	tRNA thiolation
23310	Sox thiosulfate oxidation system
23311	Polymyxin resistance, lipid A modifications with 4-amino-4-deoxy-L-arabinose
23312	Glutathione ABC transporter
23313	Small efflux transporters of SMR family
23314	Rcn nickel and cobalt homeostasis system
23315	Oxygen-sensing diguanylate cyclase and phosphodiesterase couple for c-di-GMP control
23316	Enterobacterial common antigen (LPS O-antigen)
23317	Pyruvate formate-lyase cluster with possible role in choline utilization
23318	Sulphoglycolysis
23319	Outer membrane proteases (Omptins)
23320	Carnitine operon
23321	Gram-negative cluster
23322	D-allose utilzation
23323	Rcs two-component regulator of capsule synthesis
23324	L-rhamnonate utilization cluster
23325	ZraPRS-based zinc resistance
23326	AaeAB efflux system for hydroxylated, aromatic carboxylic acids
23327	L-galactonate utilization
23328	Fructoselysine and glucoselysine
23329	Rut pathway of pyrimidine degradation
23330	Colanic acid synthesis
23331	Sphingolipids
23332	Bacterial Sphingolipids
23333	Ribosome SSU, eukaryotic and archaeal
23334	RNA polymerase, archaeal
23335	RNA polymerase, archaeal initiation factors
23336	Translation initiation factors, eukaryotic and archaeal
23337	L-2-amino-adipate to lysine module
23338	Lysine Biosynthesis via alpha-aminoadipate AAA
23339	LysX and ArgX disambiguation
23340	Riboflavin, FMN and FAD biosynthesis in Archaea
23341	Box C-D RNA-guided RNA methyltransferase
23342	Sulfur transport related cluster
23343	Polymyxin resistance, lipid A modifications with phosphoethanolamine
23344	Methylhydantoinase
23345	ESAT-6 proteins secretion system in Mycobacteria (locus ESX-4)
23346	Citrate lyase
23347	Resistance to Vancomycin and Teicoplanin
23348	Vancomycin resistance, D-Ala-D-Ala dipeptidases and carboxypeptidases
23349	Vancomycin resistance, D-Ala-D-Ser, D-Ala-Lac ligases
23350	4-hydroxybenzoyl-CoA reductase
23351	Transcriptional regulator AfsR
23352	alpha-glucoside ABC transporter
23353	Sigma54-dependent transcription related gene cluster
23354	Utilization systems for glycans and polysaccharides (PULs, SUS)
23355	Transposable elements
23356	Acetyl-CoA Pathway Wood-Ljungdahl
23357	DNA sulfur modification
23358	DNA phosphorothioation-dependent restriction system DptFGH
23359	DNA sulfur modification cluster
23360	Electron-bifurcating caffeyl-CoA reductase-Etf complex
23361	Pterin synthesis related cluster
23362	Sulfur metabolism related cluster
23363	NAD-reducing [NiFe] hydrogenase HoxFUYH(E)
23364	Tripartite multidrug efflux systems (of RND type) CmeABC and CmeDEF
23365	2,3-diacetamido-2,3-dideoxy-d-mannuronic acid
23366	Biosynthesis of 4,4'-diapolycopene dialdehyde
23367	Thiazole.oxazole-modified microcins
23368	Lysine fermentation to crotonoyl-CoA
23369	Polysulfide reductase EC 1.12.98.4 and Thiosulfate reductase
23370	Gentisate pathway
23371	Lipopolysaccharide in K12
23372	Nicotinic acid utilization
23373	Sulfhydrogenase
23374	Tripartite efflux system (of RND type) associated with Geranylgeranyl-PP synthase
23375	Biosynthesis of thiamin antivitamin Bacimethrin
23376	D-altritol utilization
23377	Stress response and cell wall lysis cluster
23378	Sox sulfur oxidation genes
23379	PrlS-PrlR Two-Component Regulatory System of Brucella
23380	Oxaloacetate decarboxylase Na-pump
23381	Pore-forming cytolytic toxins
23382	Siderophore brucebactin
23383	D-arabinitol utilization
23384	Lambdoid phage
23385	Entericidin
23386	dTDP-3-acetamido-3,6-dideoxy-alpha-D-galactose synthesis
23387	Shiga toxin (Stx)
23388	Iron transport system including ABC transporter
23389	P2-like phage
23390	Membrane bound hydrogenase Mbh -- gjo
23391	Sodium-transporting ATPase
23392	Resistance to Capreomycin and Viomycin
23393	Quinolone (Fluoroquinolone) resistance via Pentapeptide repeat proteins
23394	Translation elongation factors, eukaryotic and archaeal
23395	Ribosome biogenesis, archaeal
23396	Prefoldin
23397	D-xylose utilization
23398	Na-driven 2-hydroxyglutarate pathway
23399	Sucrose to levan conversions
23400	Phosphonate (phosphite) dehydrogenase
23401	L-Amino acid oxidases: lysine-epsilon oxidase LodA
23402	Indoleacetamide metabolism
23403	Fatty acid degradation
23404	Potential DNA repair cluster
23405	Mechanisms of PAS resistance
23406	Transcriptional regulators implicated in bedaquiline tolerance
23407	ESAT-6 proteins secretion system in Mycobacteria (locus ESX-3)
23408	Forespore to mother cell channel
23409	Vancomycin resistance, VanT serine racemases
23410	Cell wall-associated cluster in Mycobacterium
23411	PE multigene family in Mycobacterium tuberculosis complex (MTBC)
23412	ESAT-6 proteins secretion system in Mycobacteria (locus ESX-2)
23413	Thiocyanate hydrolase
23414	Protein glycosylation in Prokaryotes
23415	N,N'-diacetylbacillosamine
23416	Mu-like phage
23417	Photosystem I
23418	Carotenogenesis related cluster
23419	DevBCA efflux pump transporter (of ABC type) cyanobacterial
23420	Mycosporine synthesis cluster
23421	Plastidial (cyanobacterial) electron transport system
23422	Respiratory complex I in plants (plastidial) and cyanobacteria
23423	Tocopherols and tocotrienols (vitamin E) in plants and cyanobacteria
23424	Possible heterocyst differentiation related cluster
23425	Alkane biosynthesis in bacteria
23426	Cytochrome b6-f complex in plants (plastidial) and cyanobacteria
23427	Mannosylglucosylglycerate synthesis
23428	Sigma54-dependent transcription related gene cluster 2
23429	Carboxysome
23430	Bacillus cannibalism system
23431	Bacillus subtilis yydFGHIJ operon
23432	Phr peptides - Rap phosphatases signaling
23433	Methylglyoxal resistance in Bacillus subtilis
23434	Teichuronic acid biosynthesis
23435	Ribonuclease P, archaeal and eukaryal
23436	Sulfoquinovose biosynthesis cluster
23437	D-galacturonate utilization, oxidative pathway
23438	M. tuberculosis complex-specific locus aprABC, adaptation to phagosome
23439	Agrobacterium opine transport
23440	Toluene 4-monooxygenase (T4MO)
23441	Particulate methane monooxygenase (pMMO)
23442	Chlorophyll a synthase and phytol kinase cluster
23443	Photosystem I-type photosynthetic reaction center
23444	Methanofuran biosynthesis
23445	Methanogenesis
23446	Methanogenesis from methylated compounds
23447	Coenzyme B
23448	Coenzyme B synthesis
23449	CMP-pseudaminic acid synthesis
23450	Plasmid related functions
23451	RSF1010 like IncQ broad-host-range plasmids
23452	Anaerobic respiratory complex QmoABC
23453	3-amino-5-hydroxybenzoic Acid Synthesis
23454	Energy-conserving hydrogenase (ferredoxin)
23455	Ribosome LSU, eukaryotic and archaeal
23456	Tmc complex
23457	Fe(III) respiration - Shewanella type
23458	Pertussis toxin
23459	Phosphonoalanine utilization
23460	Siderophore Yersiniabactin Biosynthesis
23461	Zwittermicin A resistance
23462	An Arabinose Sensor
23463	Transcription factors, cyanobacterial RpoD-like sigma factors
23464	Violacein biosynthesis
23465	AMP to 3-phosphoglycerate
23466	Fatty acid metabolism cluster
23467	Siderophore [Alcaligin-like]
23468	Ubiquitin-like archaeal modifier proteins (SAMPs)
23469	Diphtheria toxin
23470	Lasso peptide maturation cluster
23471	Coenzyme F420 hydrogenase
23472	Pyrrolysine
23473	tRNA aminoacylation, Pyr
23474	5-nitroimidazole antibiotic resistance
23475	Pentalenolactone Biosynthesis and Resistance
23476	D-arabinose utilization
23477	Coenzyme F420-H2 dehydrogenase (methanophenazine)
23478	Methanophenazine hydrogenase
23479	NADP-reducing [FeFe]-hydrogenase
23480	Respiratory Systems - Shewanella (updated)
23481	Heterocyst development
23482	Heterocyst formation in cyanobacteria
23483	Benzoyl-CoA pathway of anaerobic aromatic metabolism
23484	H2:CoM-S-S-HTP oxidoreductase
23485	Nicotinate catabolism, anaerobic
23486	Quorum sensing regulation in Pseudomonas
23487	Social motility and nonflagellar swimming in bacteria
23488	Rhamnolipids in Pseudomonas
23489	Type III secretion system
23490	Predicted secretion system W clustering with cell division proteins
23491	Membrane bound hydrogenase Mbh
23492	Phosphoethanolamine transferases
23493	Reductive Dechlorination
23494	Agrocinopine utilization
23495	Metabolism of polyketides
23496	Nonribosomal peptide synthetases (NRPS) in Frankia sp. Ccl3
23497	Chlorosome
23498	Desulfovibrio high-molecular-weight cytochrome cluster
23499	Iron Scavenging cluster in Thermus
23500	Bacteriocins in Lactobacilli
23501	DNA repair and recombination, eukaryotic
23502	Archaeal membrane bound hydrogenases
23503	Energy conserving hydrogenase b, Methanococcales-Methanobacteriales-Methanopyrales
23504	Mebrane bound hydrogenases
23505	Energy conserving hydrogenase, Methanococcales-Methanobacteriales-Methanopyrales
23506	Methylenomycin synthesis
23507	Magnetotaxis
23508	Magnetosome
23509	Eucaryal transcription elongation complex
23510	Dimethylsulfide dehydrogenase
23511	Perchlorate reduction
23512	Anaerobic toluene and ethylbenzene degradation
23513	Ri
