nanopolish (0.13.3-2) unstable; urgency=medium

  * Team Upload.
  * d/rules: Explicitly call $(MAKE) on nanopolish_test so as to
    vendor the same even when nocheck is enabled (Closes: #983767)
  * Bump Standards-Version to 4.6.0 (no changes needed)
  * Bump debhelper compatibility level to 13
  * Bump watch file version to 4

 -- Nilesh Patra <nilesh@debian.org>  Wed, 25 Aug 2021 01:51:10 +0530

nanopolish (0.13.3-1) unstable; urgency=medium

  * Team Upload.
  * New upstream version 0.13.3
  * Refresh and remove merged patches
  * Update Manpages

 -- Nilesh Patra <nilesh@debian.org>  Sun, 15 Aug 2021 18:08:24 +0530

nanopolish (0.13.2-3) unstable; urgency=medium

  * Since we need the executable createt inside build time test in autopkgtest
    this is enforced in dh_auto_build to circumvent nocheck.
    Closes: #983767

 -- Andreas Tille <tille@debian.org>  Mon, 01 Mar 2021 16:39:39 +0100

nanopolish (0.13.2-2) unstable; urgency=medium

  * Team upload.
  * Patch code to not define PR_R7 and PT_R9 to avoid FTBFS on
    some archs (Closes: #960634)
    Thanks to Barry Arndt for the hint.

 -- Sascha Steinbiss <satta@debian.org>  Sat, 20 Feb 2021 15:06:55 +0100

nanopolish (0.13.2-1) unstable; urgency=medium

  [ Michael R. Crusoe ]
  * Team upload.
  * New upstream version
  * Enable building anywhere, there are no longer any SIMD intrinsics

 -- Steffen Moeller <moeller@debian.org>  Sun, 03 May 2020 19:25:27 +0200

nanopolish (0.12.1-2) unstable; urgency=medium

  * Versioned Build-Depends against libminimap2-dev (>= 2.17+dfsg-8)
    (Thanks to Hamid Nassiby)
    Closes: #958081

 -- Andreas Tille <tille@debian.org>  Sat, 18 Apr 2020 18:51:43 +0200

nanopolish (0.12.1-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Standards-Version: 4.5.0 (routine-update)
  * Add salsa-ci file (routine-update)
  * Rules-Requires-Root: no (routine-update)
  * Set upstream metadata fields: Bug-Submit. (routine-update)
  * Introduced dependency on libminimap2-dev

 -- Steffen Moeller <moeller@debian.org>  Sat, 14 Mar 2020 15:58:17 +0100

nanopolish (0.11.3-1) unstable; urgency=medium

  * Team upload.
  * New upstream version

 -- Steffen Moeller <moeller@debian.org>  Sat, 21 Dec 2019 19:10:21 +0100

nanopolish (0.11.2-1) unstable; urgency=medium

  [ Michael R. Crusoe ]
  * New upstream release
    Closes: #931784, #937105
  * debhelper-compat 12
  * Added patch to fixed #! for the python scripts
  * Set upstream metadata fields: Repository.

  [ Andreas Tille ]
  * Standards-Version: 4.4.1
  * Set upstream metadata fields: Bug-Database, Repository-Browse.
  * Unify autopkgtest

 -- Andreas Tille <tille@debian.org>  Wed, 11 Dec 2019 15:48:48 +0100

nanopolish (0.11.1-1) unstable; urgency=medium

  * Afif Elghraoui removed himself from Uploaders
  * Add myself to Uploaders
  * Make nanopolish_makerange accessible in /usr/bin
  * Asked upstrem for Python3 port
    https://github.com/jts/nanopolish/issues/626
  * New upstream version

 -- Andreas Tille <tille@debian.org>  Wed, 10 Jul 2019 13:12:23 +0200

nanopolish (0.11.0-2) unstable; urgency=medium

  * Team upload.
  [ Matthias Klose ]
  * Fix autopkg test.
  * Fix autopkg test dependency.

  [ Andreas Tille ]
  * Secure URI in copyright format
  * Remove trailing whitespace in debian/copyright

 -- Andreas Tille <tille@debian.org>  Sun, 27 Jan 2019 11:27:03 +0100

nanopolish (0.11.0-1) unstable; urgency=medium

  * Team upload.
  * Recommends: python-pysam, python-biopython
  * debhelper 12
  * Standards-Version: 4.3.0
  * Fix permissions
  * Fix path for Python interpreter
  * Better care for Python scripts

 -- Andreas Tille <tille@debian.org>  Thu, 24 Jan 2019 09:11:19 +0100

nanopolish (0.10.2-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * debhelper 11
  * Point Vcs fields to salsa.debian.org
  * Standards-Version: 4.2.1
  * Fix path for Perl interpreter
  * Enhance long description

 -- Andreas Tille <tille@debian.org>  Thu, 13 Sep 2018 11:37:24 +0200

nanopolish (0.9.0-1) unstable; urgency=medium

  * New upstream version
  * Refresh patches
  * Bump upstream copyright year
  * Bump minimum required fast5 version
  * Include upstream patch to fix HDF5 errors appearing in autopkgtest

 -- Afif Elghraoui <afif@debian.org>  Sat, 17 Feb 2018 22:02:10 -0500

nanopolish (0.8.5-2) unstable; urgency=low

  * Remove dependency on nonexistent package sse-support [i386]

 -- Afif Elghraoui <afif@debian.org>  Sun, 04 Feb 2018 19:38:40 -0500

nanopolish (0.8.5-1) unstable; urgency=medium

  * New upstream version
  * d/control:
    + Add sse-support to Build-Depends for i386
    + Remove explicit declaration of x32
  * Bump Standards-Version to 4.1.3
  * Drop patches applied upstream
  * Drop useless patch
  * Bump copyright years

 -- Afif Elghraoui <afif@debian.org>  Sun, 04 Feb 2018 16:17:01 -0500

nanopolish (0.8.4-1) unstable; urgency=medium

  [ Steffen Moeller ]
  * upstream/metadata RRID->SciCrunch

  [ Afif Elghraoui ]
  * New upstream version
  * Bump fast5 minimum version
  * Update and refine patch stack
  * Improve handling of external dependencies and build flags
  * d/rules
    + Remove redundant LDFLAGS setting
    + Don't override upstream optimization flags with default -O2
  * Bump Standards-Version to 4.1.1

 -- Afif Elghraoui <afif@debian.org>  Sat, 11 Nov 2017 00:45:23 -0500

nanopolish (0.8.1-2) unstable; urgency=medium

  * Team upload.
  * Hack around broken clean target which tries to build dependencies from
    external sources
  * DEP3
  * Fix path tp hdf5 lib on i386 (thanks for the hint to Christian Seiler
    <christian@iwakd.de>)
  * Restrict Architectures: any-amd64 any-i386 x32
    since immintrin.h is a x86/amd64 specific header for intrinsics not
    available on other architectures (Thanks for the hint to Gert Wollny
    <gw.fossdev@gmail.com>)
  * Depends: sse-support [any-i386] (thanks for the hint to Christian Seiler
    <christian@iwakd.de>)

 -- Andreas Tille <tille@debian.org>  Tue, 19 Sep 2017 15:37:43 +0200

nanopolish (0.8.1-1) unstable; urgency=medium

  [ Steffen Moeller ]
  * Team upload
  * New upstream version (Closes: #853568)
    - bumped dependency on fast5 to 0.6.2
    - established compatibility with gcc/g++ 7
    - needed some extra persuasion to not download
      eigen library.
    - added link-time optimisation
  * debian/upstream/metadata: Added references to registries

  [ Andreas Tille ]
  * debhelper 10
  * Standards-Version: 4.1.0 (no changes needed)

 -- Steffen Moeller <moeller@debian.org>  Thu, 14 Sep 2017 16:59:29 +0200

nanopolish (0.5.0-1) unstable; urgency=medium

  * Imported Upstream version 0.5.0
    - Refresh and update patches
    - Add build dependency on libeigen3
    - Fix "clean" target
  * Update email address and copyright year
  * Fix compatibility with fast5 0.5.6

 -- Afif Elghraoui <afif@debian.org>  Fri, 12 Aug 2016 00:05:16 -0700

nanopolish (0.4.0-3) unstable; urgency=medium

  * Team upload.
  * Make build reproducible.

 -- Sascha Steinbiss <satta@debian.org>  Mon, 08 Aug 2016 12:34:56 +0000

nanopolish (0.4.0-2) unstable; urgency=medium

  * Team upload.
  * Fix FTBFS with GCC 6 (Closes: #831151)
  * Enable full hardening.
  * Fix Vcs-Browser link.
  * Use secure Vcs-*.
  * Bump Standards-Version.

 -- Sascha Steinbiss <satta@debian.org>  Fri, 05 Aug 2016 20:51:28 +0000

nanopolish (0.4.0-1) unstable; urgency=low

  * Initial release (Closes: #811458)

 -- Afif Elghraoui <afif@ghraoui.name>  Wed, 20 Jan 2016 19:53:16 -0800
