///////////////////////////////////////////////////////////////////////////////
//
//  Copyright (2014) Alexander Stukowski
//
//  This file is part of OVITO (Open Visualization Tool).
//
//  OVITO is free software; you can redistribute it and/or modify
//  it under the terms of the GNU General Public License as published by
//  the Free Software Foundation; either version 2 of the License, or
//  (at your option) any later version.
//
//  OVITO is distributed in the hope that it will be useful,
//  but WITHOUT ANY WARRANTY; without even the implied warranty of
//  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
//  GNU General Public License for more details.
//
//  You should have received a copy of the GNU General Public License
//  along with this program.  If not, see <http://www.gnu.org/licenses/>.
//
///////////////////////////////////////////////////////////////////////////////

/**
 * \file
 * \brief Contains the definition of the Ovito::QuaternionT class template.
 */

#pragma once


#include <core/Core.h>
#include <core/utilities/io/SaveStream.h>
#include <core/utilities/io/LoadStream.h>
#include "Vector3.h"

namespace Ovito { OVITO_BEGIN_INLINE_NAMESPACE(Util) OVITO_BEGIN_INLINE_NAMESPACE(Math)

template<typename T> class AffineTransformationT;
template<typename T> class Matrix_3;

/**
 * \brief A rotation in 3D space described by a quaternion.
 *
 * OVITO supports four different ways of representing rotations in 3d space:
 *
 * 1. quaternions (this class),
 * 2. axis and angle (RotationT),
 * 3. transformation matrices (AffineTransformationT and Matrix_3),
 * 4. Euler angles (Matrix_3::toEuler() and RotationT::toEuler()).
 *
 * The different representations can be converted into each other.
 *
 * The class template parameter \a T specifies the data type used for the components of the quaternion.
 * The template instantiation for standard floating-point values is predefined as follows:
 *
 * \code
 *      typedef QuaternionT<FloatType> Quaternion;
 * \endcode
 *
 * Note that the default constructor does not initialize the fields of the QuaternionT class for performance reasons.
 * The nested type Identity can be used to construct the null rotation quaternion (0,0,0,1):
 *
 * \code
 *      Quaternion q = Quaternion::Identity();
 * \endcode
 *
 * QuaternionT derives from std::array<T,4>. Thus, the quaternion's components can be accessed via indices, but also via names:
 * \code
 *      q[3]  = 0.5f;
 *      q.w() = 0.5f;
 * \endcode
 *
 * \sa RotationT, Matrix_3
 */
template<typename T>
class QuaternionT : public std::array<T, 4>
{
public:

	/// An empty type that denotes the identity quaternion (0,0,0,1).
	struct Identity {};

	using typename std::array<T, 4>::size_type;
	using typename std::array<T, 4>::difference_type;
	using typename std::array<T, 4>::value_type;
	using typename std::array<T, 4>::iterator;
	using typename std::array<T, 4>::const_iterator;

	/////////////////////////////// Constructors /////////////////////////////////

	/// \brief Constructs a quaternion without initializing its components.
	/// \note All components are left uninitialized by this constructor and will therefore have an undefined value!
	QuaternionT() {}

	/// \brief Initializes the quaternion with the given values.
	/// \param x The first quaternion component.
	/// \param y The second quaternion component.
	/// \param z The third quaternion component.
	/// \param w The fourth quaternion component.
#if !defined(Q_CC_MSVC) && !defined(ONLY_FOR_DOXYGEN) // The MSVC compiler and the Doxygen parser do not like C++11 array aggregate initializers.
	Q_DECL_CONSTEXPR QuaternionT(T x, T y, T z, T w) : std::array<T, 4>{{x,y,z,w}} {}
#else
	QuaternionT(T x, T y, T z, T w) { this->x() = x; this->y() = y; this->z() = z; this->w() = w; }
#endif

	/// \brief Constructs an identity quaternion.
	/// The new quaternion represents the null transformation, i.e. no rotation at all.
#if !defined(Q_CC_MSVC) && !defined(ONLY_FOR_DOXYGEN) // The MSVC compiler and the Doxygen parser do not like C++11 array aggregate initializers.
	Q_DECL_CONSTEXPR explicit QuaternionT(Identity) : std::array<T, 4>{{ T(0), T(0), T(0), T(1) }} {}
#else
	explicit QuaternionT(Identity) { this->x() = this->y() = this->z() = T(0); this->w() = T(1); }
#endif

	/// \brief Initializes the quaternion from a rotation matrix.
	/// \param tm A rotation matrix.
	///
	/// It is assumed that \a tm is a pure rotation matrix.
	explicit QuaternionT(const Matrix_3<T>& tm);

	/// Casts the quanternion to another component type \a U.
	template<typename U>
	Q_DECL_CONSTEXPR explicit operator QuaternionT<U>() const { return QuaternionT<U>(static_cast<U>(x()), static_cast<U>(y()), static_cast<U>(z()), static_cast<U>(w())); }

	/// \brief Sets the quaternion to the identity quaternion.
	QuaternionT& setIdentity() {
		z() = y() = x() = T(0);
		w() = T(1);
		return *this;
	}

	/// \brief Sets the quaternion to the identity quaternion.
	QuaternionT& operator=(Identity) { return setIdentity(); }

    ///////////////////////////// Component access ///////////////////////////////

	/// \brief Returns the value of the X component of this quaternion.
	Q_DECL_CONSTEXPR T x() const { return (*this)[0]; }

	/// \brief Returns the value of the Y component of this quaternion.
	Q_DECL_CONSTEXPR T y() const { return (*this)[1]; }

	/// \brief Returns the value of the Z component of this quaternion.
	Q_DECL_CONSTEXPR T z() const { return (*this)[2]; }

	/// \brief Returns the value of the W component of this quaternion.
	Q_DECL_CONSTEXPR T w() const { return (*this)[3]; }

	/// \brief Returns a reference to the X component of this quaternion.
	T& x() { return (*this)[0]; }

	/// \brief Returns a reference to the Y component of this quaternion.
	T& y() { return (*this)[1]; }

	/// \brief Returns a reference to the Z component of this quaternion.
	T& z() { return (*this)[2]; }

	/// \brief Returns a reference to the W component of this quaternion.
	T& w() { return (*this)[3]; }

    /////////////////////////////// Unary operators //////////////////////////////

	/// \brief Negates all components of the quaternion.
	/// \return A new quaternion with all components negated.
	/// \note The returned quaternion does not represent the inverse rotation!
	/// \sa inverse()
	Q_DECL_CONSTEXPR QuaternionT operator-() const { return {-x(), -y(), -z(), -w()}; }

	/// \brief Returns the inverse (or conjugate) of this rotation.
	/// \return A new quaternion representing the inverse rotation of this quaternion.
	Q_DECL_CONSTEXPR QuaternionT  inverse() const { return { -x(), -y(), -z(), w() }; }

	////////////////////////////////// Comparison ////////////////////////////////

	/// \brief Compares two quaternions for equality.
	/// \param q The quaternion to compare with.
	/// \return \c true if each of the components are equal; \c false otherwise.
	Q_DECL_CONSTEXPR bool operator==(const QuaternionT& q) const { return (q.x() == x() && q.y() == y() && q.z() == z() && q.w() == w()); }

	/// \brief Compares two quaternions for inequality.
	/// \param q The quaternion to compare with.
	/// \return \c true if any of the components are not equal; \c false if all are equal.
	Q_DECL_CONSTEXPR bool operator!=(const QuaternionT& q) const { return !(q == *this); }

	///////////////////////////////// Computations ////////////////////////////////

	/// \brief Multiplies each component of the quaternion with a scalar value and stores the result in this quaternion.
	/// \param s The scalar value to multiply this quaternion with.
	/// \return A reference to \c this quaternion, which has been changed.
	QuaternionT& operator*=(T s) { x() *= s; y() *= s; z() *= s; w() *= s; return *this; }

	/// \brief Divides each component of the quaternion by a scalar value and stores the result in this quaternion.
	/// \param s The scalar value.
	/// \return A reference to \c this quaternion, which has been changed.
	QuaternionT& operator/=(T s) { x() /= s; y() /= s; z() /= s; w() /= s; return *this; }

	/// \brief Computes the scalar product of two quaternions.
	Q_DECL_CONSTEXPR T dot(const QuaternionT& b) const { return x()*b.x() + y()*b.y() + z()*b.z() + w()*b.w(); }

	/// \brief Normalizes this quaternion to unit length.
	inline void normalize() {
		T c = sqrt(dot(*this));
		OVITO_ASSERT_MSG(c > 0, "Quaternion::normalize", "Cannot normalize the null quaternion.");
		x() /= c; y() /= c; z() /= c; w() /= c;
	}

	/// \brief Returns a Normalized version of this quaternion.
	inline QuaternionT normalized() const {
		T c = sqrt(dot(*this));
		OVITO_ASSERT_MSG(c > 0, "Quaternion::normalized", "Cannot normalize the null quaternion.");
		return { x() / c, y() / c, z() / c, w() / c };
	}

	///////////////////////////////// Interpolation //////////////////////////////

	/// \brief Interpolates between two quaternions using spherical linear interpolation.
	/// \param q1 The first rotation.
	/// \param q2 The second rotation.
	/// \param alpha The parameter for the linear interpolation in the range [0,1].
	/// \return A linear interpolation between \a q1 and \a q2.
    static QuaternionT interpolate(const QuaternionT& q1, const QuaternionT& q2, T alpha) {
    	OVITO_ASSERT_MSG(std::abs(q1.dot(q1) - T(1)) <= T(FLOATTYPE_EPSILON), "Quaternion::interpolate", "Quaternions must be normalized.");
    	OVITO_ASSERT_MSG(std::abs(q2.dot(q2) - T(1)) <= T(FLOATTYPE_EPSILON), "Quaternion::interpolate", "Quaternions must be normalized.");

    	T cos_t = q1.dot(q2);

    	// Same quaternion? (avoid domain error)
    	if(T(1) <= std::abs(cos_t))
    		return q1;

    	// t is now theta.
    	T theta = std::acos(cos_t);
    	T sin_t = std::sin(theta);

    	// Same quaternion? (avoid zero-div)
    	if(sin_t == 0)
    		return q1;

    	T s = std::sin((T(1)-alpha)*theta)/sin_t;
    	T t = std::sin(alpha*theta)/sin_t;

    	QuaternionT res(s*q1.x() + t*q2.x(), s*q1.y() + t*q2.y(), s*q1.z() + t*q2.z(), s*q1.w() + t*q2.w());
    	res.normalize();
    	return res;
    }

	/// \brief Interpolates between two quaternions using spherical quadratic interpolation.
	/// \param q1 The first rotation (at t==0.0).
	/// \param q2 The second rotation (at t==1.0).
	/// \param out Controls the tangential direction at \a q1.
	/// \param in Controls the tangential direction at \a q2.
	/// \param alpha The interpolation parameter in the range [0,1].
	/// \return The interpolated quaternion between \a q1 and \a q2.
	static QuaternionT interpolateQuad(const QuaternionT& q1, const QuaternionT& q2, const QuaternionT& out, const QuaternionT& in, T alpha) {
		QuaternionT slerpP = interpolate(q1, q2, alpha);
		QuaternionT slerpQ = interpolate(out, in, alpha);
		T Ti = 2 * alpha * (1 - alpha);
		return interpolate(slerpP, slerpQ, Ti);
	}


	/// \brief Constructs a quaternion from three Euler angles.
	static QuaternionT fromEuler(T ai, T aj, T ak, typename Matrix_3<T>::EulerAxisSequence axisSequence);

	////////////////////////////////// Utilities /////////////////////////////////

	/// \brief Returns a string representation of this quaternion.
	/// \return A string that contains the four components of the quaternion.
	QString toString() const {
		return QString("[%1 %2 %3 %4]").arg(x()).arg(y()).arg(z()).arg(w());
	}
};

OVITO_END_INLINE_NAMESPACE
OVITO_END_INLINE_NAMESPACE
}	// End of namespace

#include "Vector3.h"
#include "Vector4.h"
#include "AffineTransformation.h"
#include "Matrix3.h"

namespace Ovito { OVITO_BEGIN_INLINE_NAMESPACE(Util) OVITO_BEGIN_INLINE_NAMESPACE(Math)

// Initializes the quaternion from a rotation matrix.
template<typename T>
inline QuaternionT<T>::QuaternionT(const Matrix_3<T>& tm)
{
	// Make sure this is a pure rotation matrix.
    OVITO_ASSERT_MSG(tm.isRotationMatrix(), "Quaternion constructor" , "Quaternion::Quaternion(const Matrix3& tm) accepts only pure rotation matrices.");

	// Algorithm in Ken Shoemake's article in 1987 SIGGRAPH course notes
    // article "Quaternion Calculus and Fast Animation".
    T trace = tm(0,0) + tm(1,1) + tm(2,2);
	if(trace > 0) {
		T root = sqrt(trace + T(1));
		w() = T(0.5) * root;
		root = T(0.5) / root;
		x() = (tm(2,1) - tm(1,2)) * root;
		y() = (tm(0,2) - tm(2,0)) * root;
		z() = (tm(1,0) - tm(0,1)) * root;
	}
	else {
		static const typename Matrix_3<T>::size_type next[] = { 1, 2, 0 };
		typename Matrix_3<T>::size_type i = 0;
		if(tm(1,1) > tm(0,0)) i = 1;
		if(tm(2,2) > tm(i,i)) i = 2;
		typename Matrix_3<T>::size_type j = next[i];
		typename Matrix_3<T>::size_type k = next[j];
		T root = sqrt(tm(i,i) - tm(j,j) - tm(k,k) + T(1));
		(*this)[i] = T(0.5) * root;
		root = T(0.5) / root;
		w() = (tm(k,j) - tm(j,k)) * root;
		(*this)[j] = (tm(j,i) + tm(i,j)) * root;
		(*this)[k] = (tm(k,i) + tm(i,k)) * root;
	}

	// Since we represent a rotation, make sure we are unit length.
	OVITO_ASSERT(std::abs(dot(*this)-T(1)) <= T(FLOATTYPE_EPSILON));
}

/// \brief Multiplies two quaternions.
/// \param a The first rotation.
/// \param b The second rotation.
/// \return A new rotation that is equal to first applying rotation \a b and then applying rotation \a a.
/// \relates QuaternionT
template<typename T>
Q_DECL_CONSTEXPR inline QuaternionT<T> operator*(const QuaternionT<T>& a, const QuaternionT<T>& b)
{
	return {
		a.w()*b.x() + a.x()*b.w() + a.y()*b.z() - a.z()*b.y(),
		a.w()*b.y() + a.y()*b.w() + a.z()*b.x() - a.x()*b.z(),
		a.w()*b.z() + a.z()*b.w() + a.x()*b.y() - a.y()*b.x(),
		a.w()*b.w() - a.x()*b.x() - a.y()*b.y() - a.z()*b.z() };
}

/// \brief Rotates a vector.
/// \param q The rotation.
/// \param v The vector.
/// \return The rotated vector v.
/// \relates QuaternionT
template<typename T>
#ifndef OVITO_DEBUG
Q_DECL_CONSTEXPR
#endif
inline Vector_3<T> operator*(const QuaternionT<T>& q, const Vector_3<T>& v)
{
	return Matrix_3<T>(T(1) - T(2)*(q.y()*q.y() + q.z()*q.z()),        T(2)*(q.x()*q.y() - q.w()*q.z()),        T(2)*(q.x()*q.z() + q.w()*q.y()),
						  T(2)*(q.x()*q.y() + q.w()*q.z()), T(1) - T(2)*(q.x()*q.x() + q.z()*q.z()),        T(2)*(q.y()*q.z() - q.w()*q.x()),
						  T(2)*(q.x()*q.z() - q.w()*q.y()),        T(2)*(q.y()*q.z() + q.w()*q.x()), T(1) - T(2)*(q.x()*q.x() + q.y()*q.y())) * v;
}

// Constructs a quaternion from three Euler angles.
template<typename T>
inline QuaternionT<T> QuaternionT<T>::fromEuler(T ai, T aj, T ak, typename Matrix_3<T>::EulerAxisSequence axisSequence)
{
	OVITO_ASSERT(axisSequence == Matrix_3<T>::szyx);
	int firstaxis = 2;
	int parity = 1;
	bool repetition = false;
	bool frame = false;

	int i = firstaxis;
	int j = (i + parity + 1) % 3;
	int k = (i - parity + 2) % 3;

	if(frame)
		std::swap(ai, ak);
	if(parity)
		aj = -aj;

	ai *= T(0.5);
	aj *= T(0.5);
	ak *= T(0.5);
	T ci = std::cos(ai);
	T si = std::sin(ai);
	T cj = std::cos(aj);
	T sj = std::sin(aj);
	T ck = std::cos(ak);
	T sk = std::sin(ak);
	T cc = ci*ck;
	T cs = ci*sk;
	T sc = si*ck;
	T ss = si*sk;

	QuaternionT<T> quaternion;
	if(repetition) {
		quaternion[i] = cj*(cs + sc);
		quaternion[j] = sj*(cc + ss);
		quaternion[k] = sj*(cs - sc);
		quaternion[3] = cj*(cc - ss);
	}
	else {
		quaternion[i] = cj*sc - sj*cs;
		quaternion[j] = cj*ss + sj*cc;
		quaternion[k] = cj*cs - sj*sc;
		quaternion[3] = cj*cc + sj*ss;
	}
	if(parity)
		quaternion[j] = -quaternion[j];

	return quaternion;
}

/// \brief Writes a quaternion to a text output stream.
/// \param os The output stream.
/// \param q The quaternion to write to the output stream \a os.
/// \return The output stream \a os.
/// \relates QuaternionT
template<typename T>
inline std::ostream& operator<<(std::ostream &os, const QuaternionT<T>& q) {
	return os << '[' << q.x() << ' ' << q.y() << ' ' << q.z() << ' ' << q.w() << ']';
}


/// \brief Writes the quaternion to the Qt debug stream.
/// \relates QuaternionT
template<typename T>
inline QDebug operator<<(QDebug dbg, const QuaternionT<T>& q) {
    dbg.nospace() << "[" << q.x() << ", " << q.y() << ", " << q.z() << ", " << q.w() << "]";
    return dbg.space();
}

/// \brief Writes a Quaternion to a binary output stream.
/// \param stream The output stream.
/// \param q The quaternion to write to the output stream \a stream.
/// \return The output stream \a stream.
/// \relates QuaternionT
template<typename T>
inline SaveStream& operator<<(SaveStream& stream, const QuaternionT<T>& q) {
	return stream << q.x() << q.y() << q.z() << q.w();
}

/// \brief Reads a Quaternion from a binary input stream.
/// \param stream The input stream.
/// \param q Reference to a quaternion variable where the parsed data will be stored.
/// \return The input stream \a stream.
/// \relates QuaternionT
template<typename T>
inline LoadStream& operator>>(LoadStream& stream, QuaternionT<T>& q) {
	return stream >> q.x() >> q.y() >> q.z() >> q.w();
}

/// \brief Writes a quaternion to a Qt data stream.
/// \relates QuaternionT
template<typename T>
inline QDataStream& operator<<(QDataStream& stream, const QuaternionT<T>& q) {
	return stream << q.x() << q.y() << q.z() << q.w();
}

// This template specialization is for backward compatibility with OVITO 2.7.1 and earlier,
// which always used single precision floating point numbers.
// Unfortunately, the QDataStream used by the QSettings class to serialize values
// performs no automatic precision conversion of floating point numbers.
template<>
inline QDataStream& operator<<(QDataStream& stream, const QuaternionT<double>& q) {
	return stream << (float)q.x() << (float)q.y() << (float)q.z() << (float)q.w();
}

/// \brief Reads a quaternion from a Qt data stream.
/// \relates QuaternionT
template<typename T>
inline QDataStream& operator>>(QDataStream& stream, QuaternionT<T>& q) {
	return stream >> q.x() >> q.y() >> q.z() >> q.w();
}

// This template specialization is for backward compatibility with OVITO 2.7.1 and earlier,
// which always used single precision floating point numbers.
// Unfortunately, the QDataStream used by the QSettings class to serialize values
// performs no automatic precision conversion of floating point numbers.
template<>
inline QDataStream& operator>>(QDataStream& stream, QuaternionT<double>& q) {
	QuaternionT<float> floatValue;
	stream >> floatValue;
	for(size_t i = 0; i < q.size(); i++)
		q[i] = floatValue[i];
	return stream;
}

/**
 * \brief Template class instance of the QuaternionT class used for floating-point quaternions.
 * \relates QuaternionT
 */
using Quaternion = QuaternionT<FloatType>;

OVITO_END_INLINE_NAMESPACE
OVITO_END_INLINE_NAMESPACE
}	// End of namespace

Q_DECLARE_METATYPE(Ovito::Quaternion);
Q_DECLARE_METATYPE(Ovito::Quaternion*);
Q_DECLARE_TYPEINFO(Ovito::Quaternion, Q_PRIMITIVE_TYPE);
Q_DECLARE_TYPEINFO(Ovito::Quaternion*, Q_PRIMITIVE_TYPE);


