
add_definitions(-DRDKIT_GRAPHMOL_BUILD)
rdkit_library(GraphMol
              Atom.cpp QueryAtom.cpp QueryBond.cpp Bond.cpp
              MolOps.cpp FindRings.cpp ROMol.cpp RWMol.cpp PeriodicTable.cpp
              atomic_data.cpp QueryOps.cpp MolPickler.cpp Canon.cpp
              AtomIterators.cpp BondIterators.cpp Aromaticity.cpp Kekulize.cpp
              MolDiscriminators.cpp ConjugHybrid.cpp AddHs.cpp
              Matrices.cpp Chirality.cpp RingInfo.cpp Conformer.cpp
              Renumber.cpp AdjustQuery.cpp Resonance.cpp StereoGroup.cpp
              new_canon.cpp SubstanceGroup.cpp
              SHARED
              LINK_LIBRARIES RDGeometryLib RDGeneral  
                 ${RDKit_THREAD_LIBS} )

target_link_libraries(GraphMol PUBLIC ${RDKit_THREAD_LIBS})

if(RDK_USE_URF)
  target_link_libraries(GraphMol PUBLIC ${RDK_URF_LIBS})
endif()

rdkit_headers(Atom.h
              atomic_data.h
              AtomIterators.h
              Bond.h
              BondIterators.h
              Canon.h
              Chirality.h
              Conformer.h
              details.h
              GraphMol.h
              MolOps.h
              MolPickler.h
              PeriodicTable.h
              QueryAtom.h
              QueryBond.h
              QueryOps.h
              RDKitBase.h
              RDKitQueries.h
              Resonance.h
              RingInfo.h
              Rings.h
              ROMol.h
              RWMol.h
              SanitException.h
              SubstanceGroup.h
              StereoGroup.h
              MonomerInfo.h
              new_canon.h
              MolBundle.h
              DEST GraphMol)

add_subdirectory(Depictor)
add_subdirectory(SmilesParse)
add_subdirectory(FileParsers)
add_subdirectory(Substruct)
add_subdirectory(ChemReactions)
add_subdirectory(ChemTransforms)

add_subdirectory(Subgraphs)
add_subdirectory(FilterCatalog)
add_subdirectory(FragCatalog)
add_subdirectory(Descriptors)

add_subdirectory(Fingerprints)
add_subdirectory(PartialCharges)

add_subdirectory(MolTransforms)
add_subdirectory(ForceFieldHelpers)
add_subdirectory(DistGeomHelpers)

add_subdirectory(MolAlign)
add_subdirectory(MolChemicalFeatures)
add_subdirectory(ShapeHelpers)
add_subdirectory(MolCatalog)

add_subdirectory(MolDraw2D)

add_subdirectory(FMCS)
add_subdirectory(MolHash)
add_subdirectory(MMPA)
add_subdirectory(StructChecker)

add_subdirectory(ReducedGraphs)
add_subdirectory(Trajectory)

add_subdirectory(SubstructLibrary)
add_subdirectory(RGroupDecomposition)

if(RDK_BUILD_MOLINTERCHANGE_SUPPORT)
add_subdirectory(MolInterchange)
endif(RDK_BUILD_MOLINTERCHANGE_SUPPORT)

if(RDK_BUILD_SLN_SUPPORT AND NOT CMAKE_COMPILER_IS_CLANG)
  if(CMAKE_COMPILER_IS_GNUCC AND NOT CMAKE_CXX_COMPILER_VERSION GREATER 4.8)
    message("Skipping SLN build with gcc version <= 4.8")
  else()
    add_subdirectory(SLNParse)
  endif()
endif()

if(RDK_BUILD_PYTHON_WRAPPERS)
add_subdirectory(Wrap)
endif()

add_subdirectory(MolStandardize)

rdkit_test(graphmolTest1 test1.cpp LINK_LIBRARIES FileParsers SmilesParse GraphMol
RDGeometryLib RDGeneral SubstructMatch ForceFieldHelpers ForceField)

rdkit_test(graphmolcpTest cptest.cpp LINK_LIBRARIES  SmilesParse GraphMol RDGeometryLib RDGeneral)

rdkit_test(graphmolqueryTest querytest.cpp LINK_LIBRARIES SubstructMatch SmilesParse GraphMol RDGeometryLib RDGeneral)

rdkit_test(graphmolMolOpsTest molopstest.cpp
           LINK_LIBRARIES SubstructMatch FileParsers
	   SmilesParse GraphMol RDGeometryLib RDGeneral)

rdkit_test(graphmoltestChirality testChirality.cpp
           LINK_LIBRARIES SmilesParse FileParsers
	   GraphMol RDGeometryLib RDGeneral)

rdkit_test(graphmoltestPickler testPickler.cpp
           LINK_LIBRARIES SmilesParse SubstructMatch FileParsers GraphMol RDGeometryLib RDGeneral)

rdkit_test(graphmoltestPicklerGlobalSetting testPicklerGlobalSettings.cpp
           LINK_LIBRARIES SmilesParse SubstructMatch FileParsers GraphMol RDGeometryLib RDGeneral)

rdkit_test(graphmolIterTest itertest.cpp LINK_LIBRARIES SmilesParse GraphMol RDGeometryLib RDGeneral)

rdkit_test(hanoiTest hanoitest.cpp LINK_LIBRARIES
     SubstructMatch SmilesParse FileParsers GraphMol
     RDGeometryLib RDGeneral ${RDKit_THREAD_LIBS} )

rdkit_test(graphmolMemTest1 memtest1.cpp LINK_LIBRARIES SmilesParse GraphMol RDGeometryLib RDGeneral)

rdkit_test(resMolSupplierTest resMolSupplierTest.cpp
           LINK_LIBRARIES SmilesParse GraphMol RDGeometryLib RDGeneral SubstructMatch FileParsers)

rdkit_test(molBundleTest testMolBundle.cpp
          LINK_LIBRARIES SmilesParse GraphMol RDGeometryLib RDGeneral SubstructMatch FileParsers)

rdkit_test(testSGroup testSGroup.cpp LINK_LIBRARIES FileParsers GraphMol)

rdkit_test(test-valgrind test-valgrind.cpp LINK_LIBRARIES SmilesParse GraphMol RDGeneral)

rdkit_catch_test(graphmolTestsCatch catch_tests.cpp
           LINK_LIBRARIES SubstructMatch FileParsers SmilesParse GraphMol RDGeometryLib RDGeneral)

rdkit_catch_test(graphmolSGroupCatch catch_sgroups.cpp
           LINK_LIBRARIES SmilesParse GraphMol RDGeometryLib RDGeneral)
