seqan-raptor (3.0.1+ds-12build1) stonking; urgency=medium

  * Rebuild against new libyaml-cpp0.9.

 -- Gianfranco Costamagna <locutusofborg@debian.org>  Tue, 28 Jul 2026 19:13:34 +0200

seqan-raptor (3.0.1+ds-12) unstable; urgency=medium

  * Team upload.
  * debian/patches/fix-build-with-gcc16.patch: New. Fix FTBFS with gcc-16.
    (Closes: #1133629)

 -- Marcos Talau <talau@debian.org>  Tue, 21 Apr 2026 22:30:05 -0300

seqan-raptor (3.0.1+ds-11) unstable; urgency=medium

  * Team upload.
  * Fix doc creation error with doxygen >= 1.15
    + ignore pdflatex return result
    Closes: #1111716
  * Standards-Version: 4.7.2 (routine-update)

 -- Andreas Tille <tille@debian.org>  Wed, 10 Dec 2025 16:15:20 +0100

seqan-raptor (3.0.1+ds-10) unstable; urgency=medium

  [ Enrico Seiler ]
  * Resolve doxygen latex error (Closes: #1114369)

 -- Michael R. Crusoe <crusoe@debian.org>  Tue, 16 Sep 2025 18:51:07 +0200

seqan-raptor (3.0.1+ds-9) unstable; urgency=medium

  * d/{tests/,}control: adjust minimum version of libseqan3-dev to include the
    "~rc.3" component.

 -- Michael R. Crusoe <crusoe@debian.org>  Tue, 11 Feb 2025 17:44:10 +0100

seqan-raptor (3.0.1+ds-8) unstable; urgency=medium

  * d/{tests/,}control: adjust minimum version of libseqan3-dev.
  * Release to unstable.

 -- Michael R. Crusoe <crusoe@debian.org>  Tue, 11 Feb 2025 17:16:25 +0100

seqan-raptor (3.0.1+ds-7) experimental; urgency=medium

  * d/control: Only build on 64-bit little-endian systems.
  * d/tests/control: pin to the exact version of libseqan3-dev in
    experimental. Note: Remove this version pinning when we upload to
    unstable.
  * d/seqan-raptor.install: destination path should not begin with a
    "/".
  * d/rules: fix "nocheck" build profile.

 -- Michael R. Crusoe <crusoe@debian.org>  Sat, 08 Feb 2025 12:08:45 +0100

seqan-raptor (3.0.1+ds-6) experimental; urgency=medium

  * Team upload.
  * d/control: Experimental rebuild using SeqAn 3.4.0-rc.3
  * d/patches: Add patch for SeqAn 3.4.0-rc.3
  * d/control: pkg-config has been superseded by pkgconf
  * d/control: Standards-Version: 4.7.0

 -- Enrico Seiler <enrico.seiler.debian@outlook.com>  Wed, 05 Feb 2025 18:39:10 +0100

seqan-raptor (3.0.1+ds-5) unstable; urgency=medium

  * d/tests/run-unit-test: also use -DRAPTOR_NATIVE_BUILD=OFF here

 -- Michael R. Crusoe <crusoe@debian.org>  Wed, 06 Sep 2023 15:04:40 +0200

seqan-raptor (3.0.1+ds-4) unstable; urgency=medium

  * d/tests/*: added post-install running of the CLI tests againsted the
    installed binary.
  * d/rules: better clean up after ourselves.
  * Update doxygen patch with upstream's help for better doxygen 1.9.8
    compat. Closes: #1051156
  * d/control: therefore xelatex is no longer needed to build the docs.

 -- Michael R. Crusoe <crusoe@debian.org>  Tue, 05 Sep 2023 13:59:30 +0200

seqan-raptor (3.0.1+ds-3) unstable; urgency=medium

  * d/rules,d/tests/*: whoops, more work needed to build & run all the available
    tests.
  * Add "-O3" to the build-flags, to match "-DCMAKE_BUILD_TYPE=Release".
  * d/tests/cwl: save results to $AUTOPKGTEST_ARTIFACTS, use
    $AUTOPKGTEST_TMP for temporary files.

 -- Michael R. Crusoe <crusoe@debian.org>  Tue, 22 Aug 2023 13:14:50 +0200

seqan-raptor (3.0.1+ds-2) unstable; urgency=medium

  * Fix docs only build
  * d/clean: remove doc_build to fix "fails to build source after
    successful build". Closes: #1048716
  * r/rules: allow for existing "doc_build" directory. Fixes "Fails to
    build binary packages again after successful build". Closes:
    #1049768
  * d/rules: export and install the CWL descriptions to
    /usr/share/commonwl/raptor-*.cwl
  * d/control: suggest the virtual package cwl-runner.
  * d/clean: clean up the generated manpages and CWL descriptions.
  * d/tests/: add CWL-based autopkgtest.

 -- Michael R. Crusoe <crusoe@debian.org>  Mon, 21 Aug 2023 14:17:58 +0200

seqan-raptor (3.0.1+ds-1) unstable; urgency=medium

  * New upstream version
  * Set upstream metadata fields: Bug-Submit.
  * Removed 3 patches that are part of the new release. Refreshed the
    remaining patches.
  * d/control: add new build-dep: libyaml-cpp-dev

 -- Michael R. Crusoe <crusoe@debian.org>  Thu, 17 Aug 2023 16:04:15 +0200

seqan-raptor (3.0.0+ds-3) unstable; urgency=medium

  * d/rules: set -DRAPTOR_STRIP_BINARY=OFF to prevent binary striping

 -- Michael R. Crusoe <crusoe@debian.org>  Wed, 19 Jul 2023 14:16:30 +0200

seqan-raptor (3.0.0+ds-2) unstable; urgency=medium

  * d/patches/debian_seqan3: set patch to vendored seqan3 libraries.
  * d/control: build-dep on seqan3 3.3.0 release candidate.
  * d/patches/gcc13*: cherry-pick from upstream to fix gcc-13 build.
    Closes: #1037856

 -- Michael R. Crusoe <crusoe@debian.org>  Fri, 14 Jul 2023 14:15:12 +0200

seqan-raptor (3.0.0+ds-1) unstable; urgency=medium

  * d/watch: find complete source archives.
  * New upstream version
  * Standards-Version: 4.6.2 (routine-update)
  * Refresh patches.
  * d/control: bump minimum Seqan3 build-dep to 3.2.0+ds-7 to grab GCC
    12.3+ fix.
  * d/patches/fix_missing_lambda_capture.patch: Cherry-pick patch from upstream.
  * d/rules: Update list of subcommands for exporting man pages.
  * d/control: build-dep on cppreference-doc-en-html
  * d/patches/debian_cppreference: use cppreference-doc-en-html to build
    docs instead of downloading.
  * d/patches/doxygen_update: adjust options for older Doxygen 1.9.4
  * d/not-installed: acknowledge that chopper is not installed
  * d/rules: only list missing files; don't error
  * Fix auto_install for the docs package.

 -- Michael R. Crusoe <crusoe@debian.org>  Fri, 14 Jul 2023 13:55:36 +0200

seqan-raptor (2.0.0.0.git.fecfbca+ds-3) unstable; urgency=medium

  * Append the CPPFLAGS, not overwrite it
  * Don't compile with -march=native
  * Revert: Upstream says doxygen docs aren't ready yet, so skip that for now.
  * Also include man page for raptor build
  * d/rules: build hardening
  * d/control: remove first-person language from the descriptions
  * d/control: -doc goes in the doc section
  * d/patches/spelling: fix a typo

 -- Michael R. Crusoe <crusoe@debian.org>  Tue, 01 Nov 2022 13:00:02 +0100

seqan-raptor (2.0.0.0.git.fecfbca+ds-2) unstable; urgency=medium

  * Generate and package the man pages.
  * Upstream says doxygen docs aren't ready yet, so skip that for now.
  * d/patches/privacy: don't phone home to check for a new version
  * d/patches/debian_xxhash: get the libdir using pkg-config (Closes:
    #1023176)

 -- Michael R. Crusoe <crusoe@debian.org>  Mon, 31 Oct 2022 11:43:26 +0100

seqan-raptor (2.0.0.0.git.fecfbca+ds-1) unstable; urgency=medium

  * Initial release (Closes: #1022057)

 -- Michael R. Crusoe <crusoe@debian.org>  Wed, 19 Oct 2022 18:58:32 +0200
