Date: 2020-01-13T11:58:59+00:00

Actual source code: test6.c
slepc-3.12.2 2020-01-13
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      1: /*
      2:    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
      3:    SLEPc - Scalable Library for Eigenvalue Problem Computations
      4:    Copyright (c) 2002-2019, Universitat Politecnica de Valencia, Spain

      6:    This file is part of SLEPc.
      7:    SLEPc is distributed under a 2-clause BSD license (see LICENSE).
      8:    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
      9: */
     10: /*
     11:    Define the function

     13:         f(x) = (1-x^2) exp(-x/(1+x^2))

     15:    with the following tree:

     17:             f(x)                  f(x)              (combined by product)
     18:            /    \                 g(x) = 1-x^2      (polynomial)
     19:         g(x)    h(x)              h(x)              (combined by composition)
     20:                /    \             r(x) = -x/(1+x^2) (rational)
     21:              r(x)   e(x)          e(x) = exp(x)     (exponential)
     22: */

     24: static char help[] = "Test combined function.\n\n";

     26: #include <slepcfn.h>

     28: /*
     29:    Compute matrix function B = (I-A^2) exp(-(I+A^2)\A)
     30:  */
     31: PetscErrorCode TestMatCombine(FN fn,Mat A,PetscViewer viewer,PetscBool verbose,PetscBool inplace)
     32: {
     34:   PetscBool      set,flg;
     35:   PetscInt       n;
     36:   Mat            F;
     37:   Vec            v,f0;
     38:   PetscReal      nrm;

     41:   MatGetSize(A,&n,NULL);
     42:   MatCreateSeqDense(PETSC_COMM_SELF,n,n,NULL,&F);
     43:   PetscObjectSetName((PetscObject)F,"F");
     44:   /* compute matrix function */
     45:   if (inplace) {
     46:     MatCopy(A,F,SAME_NONZERO_PATTERN);
     47:     MatIsHermitianKnown(A,&set,&flg);
     48:     if (set && flg) { MatSetOption(F,MAT_HERMITIAN,PETSC_TRUE); }
     49:     FNEvaluateFunctionMat(fn,F,NULL);
     50:   } else {
     51:     FNEvaluateFunctionMat(fn,A,F);
     52:   }
     53:   if (verbose) {
     54:     PetscPrintf(PETSC_COMM_WORLD,"Matrix A - - - - - - - -\n");
     55:     MatView(A,viewer);
     56:     PetscPrintf(PETSC_COMM_WORLD,"Computed f(A) - - - - - - -\n");
     57:     MatView(F,viewer);
     58:   }
     59:   /* print matrix norm for checking */
     60:   MatNorm(F,NORM_1,&nrm);
     61:   PetscPrintf(PETSC_COMM_WORLD,"The 1-norm of f(A) is %6.3f\n",(double)nrm);
     62:   /* check FNEvaluateFunctionMatVec() */
     63:   MatCreateVecs(A,&v,&f0);
     64:   MatGetColumnVector(F,f0,0);
     65:   FNEvaluateFunctionMatVec(fn,A,v);
     66:   VecAXPY(v,-1.0,f0);
     67:   VecNorm(v,NORM_2,&nrm);
     68:   if (nrm>100*PETSC_MACHINE_EPSILON) {
     69:     PetscPrintf(PETSC_COMM_WORLD,"Warning: the norm of f(A)*e_1-v is %g\n",(double)nrm);
     70:   }
     71:   MatDestroy(&F);
     72:   VecDestroy(&v);
     73:   VecDestroy(&f0);
     74:   return(0);
     75: }

     77: int main(int argc,char **argv)
     78: {
     80:   FN             f,g,h,e,r,fcopy;
     81:   Mat            A;
     82:   PetscInt       i,j,n=10,np,nq;
     83:   PetscScalar    x,y,yp,*As,p[10],q[10];
     84:   char           strx[50],str[50];
     85:   PetscViewer    viewer;
     86:   PetscBool      verbose,inplace;

     88:   SlepcInitialize(&argc,&argv,(char*)0,help);if (ierr) return ierr;
     89:   PetscOptionsGetInt(NULL,NULL,"-n",&n,NULL);
     90:   PetscOptionsHasName(NULL,NULL,"-verbose",&verbose);
     91:   PetscOptionsHasName(NULL,NULL,"-inplace",&inplace);
     92:   PetscPrintf(PETSC_COMM_WORLD,"Combined function, n=%D.\n",n);

     94:   /* Create function */

     96:   /* e(x) = exp(x) */
     97:   FNCreate(PETSC_COMM_WORLD,&e);
     98:   FNSetType(e,FNEXP);
     99:   FNSetFromOptions(e);
    100:   /* r(x) = x/(1+x^2) */
    101:   FNCreate(PETSC_COMM_WORLD,&r);
    102:   FNSetType(r,FNRATIONAL);
    103:   FNSetFromOptions(r);
    104:   np = 2; nq = 3;
    105:   p[0] = -1.0; p[1] = 0.0;
    106:   q[0] = 1.0; q[1] = 0.0; q[2] = 1.0;
    107:   FNRationalSetNumerator(r,np,p);
    108:   FNRationalSetDenominator(r,nq,q);
    109:   /* h(x) */
    110:   FNCreate(PETSC_COMM_WORLD,&h);
    111:   FNSetType(h,FNCOMBINE);
    112:   FNSetFromOptions(h);
    113:   FNCombineSetChildren(h,FN_COMBINE_COMPOSE,r,e);
    114:   /* g(x) = 1-x^2 */
    115:   FNCreate(PETSC_COMM_WORLD,&g);
    116:   FNSetType(g,FNRATIONAL);
    117:   FNSetFromOptions(g);
    118:   np = 3;
    119:   p[0] = -1.0; p[1] = 0.0; p[2] = 1.0;
    120:   FNRationalSetNumerator(g,np,p);
    121:   /* f(x) */
    122:   FNCreate(PETSC_COMM_WORLD,&f);
    123:   FNSetType(f,FNCOMBINE);
    124:   FNSetFromOptions(f);
    125:   FNCombineSetChildren(f,FN_COMBINE_MULTIPLY,g,h);

    127:   /* Set up viewer */
    128:   PetscViewerASCIIGetStdout(PETSC_COMM_WORLD,&viewer);
    129:   FNView(f,viewer);
    130:   if (verbose) {
    131:     PetscViewerPushFormat(viewer,PETSC_VIEWER_ASCII_MATLAB);
    132:   }

    134:   /* Scalar evaluation */
    135:   x = 2.2;
    136:   SlepcSNPrintfScalar(strx,50,x,PETSC_FALSE);
    137:   FNEvaluateFunction(f,x,&y);
    138:   FNEvaluateDerivative(f,x,&yp);
    139:   SlepcSNPrintfScalar(str,50,y,PETSC_FALSE);
    140:   PetscPrintf(PETSC_COMM_WORLD,"  f(%s)=%s\n",strx,str);
    141:   SlepcSNPrintfScalar(str,50,yp,PETSC_FALSE);
    142:   PetscPrintf(PETSC_COMM_WORLD,"  f'(%s)=%s\n",strx,str);

    144:   /* Test duplication */
    145:   FNDuplicate(f,PetscObjectComm((PetscObject)f),&fcopy);

    147:   /* Create matrices */
    148:   MatCreateSeqDense(PETSC_COMM_SELF,n,n,NULL,&A);
    149:   PetscObjectSetName((PetscObject)A,"A");

    151:   /* Fill A with a symmetric Toeplitz matrix */
    152:   MatDenseGetArray(A,&As);
    153:   for (i=0;i<n;i++) As[i+i*n]=2.0;
    154:   for (j=1;j<3;j++) {
    155:     for (i=0;i<n-j;i++) { As[i+(i+j)*n]=1.0; As[(i+j)+i*n]=1.0; }
    156:   }
    157:   MatDenseRestoreArray(A,&As);
    158:   MatSetOption(A,MAT_HERMITIAN,PETSC_TRUE);
    159:   TestMatCombine(fcopy,A,viewer,verbose,inplace);

    161:   /* Repeat with same matrix as non-symmetric */
    162:   MatSetOption(A,MAT_HERMITIAN,PETSC_FALSE);
    163:   TestMatCombine(fcopy,A,viewer,verbose,inplace);

    165:   MatDestroy(&A);
    166:   FNDestroy(&f);
    167:   FNDestroy(&fcopy);
    168:   FNDestroy(&g);
    169:   FNDestroy(&h);
    170:   FNDestroy(&e);
    171:   FNDestroy(&r);
    172:   SlepcFinalize();
    173:   return ierr;
    174: }

    176: /*TEST

    178:    test:
    179:       suffix: 1
    180:       nsize: 1

    182:    test:
    183:       suffix: 2
    184:       nsize: 1
    185:       args: -inplace
    186:       output_file: output/test6_1.out

    188: TEST*/