Users of SnpEff include most major research and academic institutions, as well as pharmaceutical companies and clinical sequencing projects.

**Some Academic &amp; Research institutions using SnpEff:**

* Broad Institute (MIT &amp; Harvard)
* NIH (US)
* Harvard University
* Princeton University
* BGI (China)
* Massachusetts General Hospital
* Whitehead Institute, MIT
* Wellcome Trust Sanger Institute (UK)
* UC Berkeley
* Wellcome Trust Centre for Human Genetics (UK)
* University of Cambridge (UK)
* Duke University
* Max Planck (Germany)
* Cold Spring Harbor Laboratory (CSHL)
* Institut Pasteur (France)
* NCI / NIH (National Cancer Institute, US)
* McGill University (Canada)
* EMBL (Cambridge, UK)
* University of Toronto (Canada)
* University of Cambridge (UK)
* Yale University
* Columbia University
* Stanford University
* Brown University
* Genome Quebec (Canada)
* Centre national de la recherche scientifique (CNRS, France)
* University of Michigan
* Kyoto University (Japan)
* Institut National de la Recherche Agronomique (INRA, France)
* University of Wisconsin-Madison
* UT Southwestern Medical Center
* University of Southern California
* Bologna University (Italy)
* Casa Sollievo della Sofferenza - Mendel (Italy)
* Universitat Wien (Vienna, Austria)
* Ottawa University (Canada)
* Peter MacCallum Cancer Centre (Australia)
* University of Alabama Birmigham
* University of Bristol (UK)
* UC-Davis (California)
* Winsconsin University
* TUM University (Germany)
* The Translational Genomics Institute (Tgen)
* Rutgers University (New Jersey)
* Nagasaki University (Japan)
* Washington University
* Netherlands Cancer Institute (NKI)
* Centro Nacional de Biotecnolog&iacute;a, (National Center for Biotecnology) CNB-CSIC, Madrid, Spain
* University of California-Riverside
* Carleton University (Canada)
* Memorial Sloan-Kettering Cancer Center
* Boston University 
* University of California, San Francisco (UCSF) 
* Institute of Cancer Research (ICR), UK
* University of Virginia
* University of British Columbia (Canada)
* Seoul National University (Korea)
* University of Southern California (USC)
* Arizona State University (ASU)
* NeuroTexas Institute at St. David's HealthCare
* University of Otago (New Zealand)
* Queensland Institute of Medical Research (Australia)
* National University of Singapore (NUS)
* Children's Hospital of Philadelphia
* Technion (Israel)
* Queensland UNiversity (Australia)
* Vall d'Hebron Research Institute: VHIR (Barcelona. Catalonia. Spain)
* University of Pretoria (South Africa).
* Centrum Wiskunde &amp; Informatica (Amsterdam, Netherlands)
* Technical University of Denmark: DTU (Denmark)
* Spanish National Research Council (CSIC, Spain)
* Swedish University of Agricultural Sciences: SLU (Sweden)
* University of Iowa
* Bilkent University (Turkey)
* The Hebrew University of Jerusalem (Israel)
* Laboratory of Malaria and Vector Research NIH/NIAID
* Max F. Perutz Laboratories: MFPL (Vienna, Austria)
* Animal Health Trust: AHT (UK)
* BC Cancer Agency (Canada)
* University of California, Irvine
* University College London (London, UK)
* Centro Nacional de An&aacute;lisis Gen&oacute;mico: CNAG (Barcelona, Spain)
* Advanced Genomics and Bioinformatic Research Center (Turkey)

**Some private Companies &amp; Corporations users of SnpEff:**

* Bayer
* Novartis
* Illumina
* Johnson &amp; Johnson
* AstraZeneca
* Novocraft 
* Sanofi (France)
* Accelrys
* DnaNexus
* Bio-Prodict (Netherlands)
* Spiral Genetics
* Covance
* Eisai (Japan)
* EdgeBio
* BioBase
* Counsyl


!!! note
    These are not by any means comprehensive lists.