#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	S1	S2	S3	S4	S5	S6	S7	S8	S9	S10	S11	S12	S13	S14	S15	S16	S17	S18	S19	S20	S21	S22	S23	S24	S25	S26	S27	S28	S29	S30	S31	S32	S33	S34
13	49496005	.	GCCCAGGCGTCGCCGCCCCGGCCC	GCC	213.0	.	INDEL;EFF=frameshift_variant(HIGH||cgccccggcccg/|p.Arg1fs|285|PHF11|protein_coding|CODING|ENST00000426879|1|1|WARNING_TRANSCRIPT_NO_START_CODON),conservative_inframe_deletion(MODERATE||caggcgtcgccgccccggccc/|p.Gln3_Pro9del/c.7_27delCAGGCGTCGCCGCCCCGGCCC|331|PHF11|protein_coding|CODING|ENST00000378319|1|1),conservative_inframe_deletion(MODERATE||caggcgtcgccgccccggccc/|p.Gln3_Pro9del/c.7_27delCAGGCGTCGCCGCCCCGGCCC|159|PHF11|protein_coding|CODING|ENST00000496623|1|1),5_prime_UTR_truncation+exon_loss_variant(MODERATE|||c.-3_-23delCAGGCGTCGCCGCCCCGGCCC|285|PHF11|protein_coding|CODING|ENST00000426879|1|1|WARNING_TRANSCRIPT_NO_START_CODON),upstream_gene_variant(MODIFIER||5|||PHF11|processed_transcript|CODING|ENST00000476953||1),upstream_gene_variant(MODIFIER||8||285|PHF11|protein_coding|CODING|ENST00000426879||1|WARNING_TRANSCRIPT_NO_START_CODON),upstream_gene_variant(MODIFIER||228|||PHF11|processed_transcript|CODING|ENST00000487433||1),upstream_gene_variant(MODIFIER||347||132|PHF11|protein_coding|CODING|ENST00000496612||1),upstream_gene_variant(MODIFIER||384||292|PHF11|protein_coding|CODING|ENST00000357596||1),upstream_gene_variant(MODIFIER||389|||PHF11|nonsense_mediated_decay|CODING|ENST00000465045||1),upstream_gene_variant(MODIFIER||389||97|PHF11|protein_coding|CODING|ENST00000485919||1|WARNING_TRANSCRIPT_INCOMPLETE),upstream_gene_variant(MODIFIER||392||167|PHF11|protein_coding|CODING|ENST00000442195||1),upstream_gene_variant(MODIFIER||1105||292|PHF11|protein_coding|CODING|ENST00000488958||1),upstream_gene_variant(MODIFIER||1105||190|PHF11|protein_coding|CODING|ENST00000621822||1),downstream_gene_variant(MODIFIER||1006||707|SETDB2|protein_coding|CODING|ENST00000317257||1),downstream_gene_variant(MODIFIER||1006||719|SETDB2|protein_coding|CODING|ENST00000611815||1),downstream_gene_variant(MODIFIER||1005||719|SETDB2|protein_coding|CODING|ENST00000354234||1),non_coding_transcript_exon_variant(MODIFIER|||n.399_419delCAGGCGTCGCCGCCCCGGCCC||PHF11|retained_intron|CODING|ENST00000482487|1|1),non_coding_transcript_exon_variant(MODIFIER|||n.344_364delCAGGCGTCGCCGCCCCGGCCC||PHF11|processed_transcript|CODING|ENST00000481509|1|1),non_coding_transcript_exon_variant(MODIFIER|||n.25_45delCAGGCGTCGCCGCCCCGGCCC||PHF11|processed_transcript|CODING|ENST00000467763|1|1),non_coding_transcript_exon_variant(MODIFIER|||||PHF11|processed_transcript|CODING|ENST00000476953|1|1)
