#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO
X	229529	.	CCTTCCTGATCTTG	CTTA	.	.	CIGAR=1M13D3I
X	2835984	.	TGAAAAACAGGCAGCCCACGCCGG	TAAAACACAAGAAGC	.	.	CIGAR=1M23D14I
X	13337739	.	ATCAATGCCGAGCTTCTGATAT	ACCA	.	.	CIGAR=1M21D3I
X	66765158	.	TGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA	TGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA,TGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA,TGCAGCAGCAGCAGCAGCAGCAGCA,TGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA,TGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA,TGCAGCAGCAGCAGCAGCAGCAGCAGCA,T,TGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA,TGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA,TGCAGCAGCAGCAGCAGCAGCA,TGCAGCAGCAGCA,TGCAGCAGCAGCAGCAGCA	.	.	MQ=0
X	66765158	.	TGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA	T	.	.	phastCons
X	66765158	.	TGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA	T	.	.	MQ=0
X	66765158	.	TGCAGCAGCAGCAGCAGCAGCAGCAGCA	TGCAGCAGCAGCA,T	.	.	MQ=0
X	66765158	.	TGCAGCAGCAGCAGCAGCAGCAGCA	T	.	.	MQ=0
X	66765158	.	TGCAGCAGCAGCAGCAGCAGCA	T,TGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA	.	.	MQ=0
X	66765158	.	TGCAGCAGCAGCAGCAGCA	TGCAGCAGCA,T	.	.	MQ=0
X	66765158	.	TGCAGCAGCAGCAGCAGCA	T	.	.	MQ=0
X	66765158	.	TGCAGCAGCAGCA	T,TGCAGCAGCAGCAGCAGCA	.	.	MQ=0
X	66765158	.	TGCAGCA	T	.	.	MQ=0
X	66765160	.	CAGCAGCAGCA	CT	.	.	phastCons
X	114425195	.	C	CAACGCCCACAGCGGAGGCCGCTCGCCC	.	.	MQ=0
X	114425195	.	CGACG	CAACGCCCACAGCGGAGGCCGCTCGCCCGACA	.	.	CIGAR=1M4D31I
X	153050158	.	GGACAG	GCCCGTCCCC	.	.	CIGAR=1M5D9I
X	153151276	.	CCCCGCAGGT	CGCCGCCCAGG	.	.	CIGAR=1M9D10I
X	153151276	.	CCCCGCAGGTTA	CGCCGCCCAGGTC	.	.	CIGAR=1M11D12I
1	26488469	.	CTCG	CGGCGGCTCT	.	.	phastCons
1	26608811	.	TCCAGGACAGGGACTGGGGCCGGGACCGGGACCGGGACTGGGGCCGGGA	T	.	.	MQ=0
1	26608811	.	TCCAGGACAGGGACTGGGGCCGGGACCGGGACCGGGACTGGG	TCCGGGACCGGGACTGGG,TCCAGGACAGGGACTGGA	.	.	CIGAR=1M24D17M,17M25D1I
1	26608811	.	TCCAGGACAGGGACTGGGGCCGGGACCGGGACC	TCCGGGACC,TCCAGGACA	.	.	CIGAR=1M24D,9M24D
1	26608812	.	CCAGGACAGGGACTGGGGCCGGGACC	CG	.	.	CIGAR=1M25D1I
1	26608819	.	AGGGACTGGGGCCGGGACCGGGACC	A	.	.	CIGAR=1M24D
1	26608819	.	AGGGACTGGGGCCGGGACCGGGACCGGGACTGGGGCCGGGACCGGGACC	A	.	.	MQ=0
1	26608827	.	GGGCCGGGACCGGGACCGGGACTGGG	GA	.	.	CIGAR=1M25D1I
1	26608827	.	G	GGGCCGGGACCGGGACCGGGACTGG	.	.	CIGAR=1M24I
1	26608848	.	CTGGGGCCGGGACCGGGACC	CA	.	.	CIGAR=1M19D1I
1	26608848	.	CTGGGGCCGGGACCGGGACCGGGACTGGGGCCGGGA	CAGGGACTGGGGCCGGGA,CTGGGG	.	.	CIGAR=1M19D1I16M,6M30D
1	26608853	.	GCCGGGACCGGGACCGGGACTGGGGCCGGGACCGGGACCGGGAC	GCCGGGACCGGGAC,GCCGGGACCGGGAG	.	.	CIGAR=1M30D13M,13M31D1I
1	26608853	.	GCCGGGACCGGGACCGGGACTGGGGCCGGGA	G	.	.	CIGAR=1M30D
1	26608865	.	ACCGGGACTGGGGCCGGGACCGGGACCGGGAC	AG	.	.	CIGAR=1M31D1I
1	26611853	.	AGTGCAGCGGC	A	.	.	MQ=0
1	26611853	.	AGTGCAGCGGCTTC	ACCT	.	.	CIGAR=1M13D3I
1	28268829	.	TCCCCCA	TCCCCGCC,TCCCCCCC	.	.	AB=0.316279,0.258333
1	32120943	.	GGGCTCCCCGAAGG	GAGCT	.	.	phastCons
1	46871319	.	GCCCAGGGGGCTCCTC	GGGTTGA	.	.	phastCons
1	53793510	.	CTGCAGCAGCAGCAGCAGCA	CC	.	.	phastCons
1	120612002	.	CGG	C	.	.	MQ=0
1	120612004	.	GGGCGCAGGGC	GCGCAGGAA	.	.	phastCons
1	145586669	.	CACTTTT	C	.	.	MQ=0
1	145586671	.	CTTTTACAC	CCA	.	.	CIGAR=1M8D2I
1	179457763	.	CTCTCTCCTTTCTTTCTTTCTT	C,CTCTCTCTTTCTTTCTTTCTTTCTT,CTCTCTCTCTTTCTTTCTT	.	.	CIGAR=1M21D,7M3I15M,7M3D12M
1	179457763	.	CTCTCTCCTTTCTTTCTTTCTTT	CTCTTT,CTCTCTC	.	.	CIGAR=1M17D5M,7M16D
1	179457763	.	CTCTCTCCTTTCTTTCTTTCTTTCTT	C,CTCTCTCTTTCTTTCTTTCTTTCTT	.	.	CIGAR=1M25D,6M1D19M
1	179457764	.	TCTCTCCTTTCTTTCTTTCTT	TTCTCCTTTCTTTCTTTCTT,TC	.	.	CIGAR=1M1D19M,2M19D
1	179457765	.	CTCTCCTTTCTTTCTTTCTT	C,CTCTCTCTTTCTTTCTTTCTT	.	.	CIGAR=1M19D,5M1I15M
1	179457766	.	TCTCCTT	TCTT,TCTCTT,TCTCTCTT,TCTC	.	.	MQ=0
1	179457767	.	CTCCTTTCTT	C,CTCTTTCTT	.	.	CIGAR=1M9D,2M1D7M
1	179457767	.	CTCCTTTCTTTCTTTCTTTCTTTCTT	C	.	.	CIGAR=1M25D
1	179457768	.	TCCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTT,TCTCTTTCTTTCTTTCTTTCTT,TCTCTTTCTTTCTTTCTT,TCTTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTT,TCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTCTCTTTCTTTCTTTCTTTCTT,TC,TTCTTTCTTTCTTTCTT,TCTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	MQ=0
1	179457768	.	TCCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTT,TCTTTTCTT,TCTTTTCTTTCTT,TCTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTT,TCTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTT,TCTCTCTCTT,TCTC,TCTCTCTT	.	.	CIGAR=1M1D13M,2M13D1I,2M9D1I,2M5D23I,2M1D23I,2M15D4I,2M19D2I,2M15D2I
1	179457769	.	CC	CTTTC,CTTTTCTTTCTTTCTTTCTTTCTT	.	.	CIGAR=1M3I1M,1M1D23I
1	179457769	.	C	CCTTTCTTT	.	.	CIGAR=1M8I
1	179457769	.	CC	CTTTTCTTTCTTTCTTTCTTTCTT	.	.	CIGAR=1M1D23I
1	179457769	.	CCT	C	.	.	MQ=0
1	179457769	.	CCTT	C	.	.	MQ=0
1	179457769	.	CCTT	CTCTT,C,CTCTCTT,CTTCTT	.	.	MQ=0
1	179457769	.	CCTTTC	CTTTTCTTTCTTTCTTTCTTTCTT	.	.	CIGAR=1M5D23I
1	179457769	.	CCTTTCTTT	C	.	.	CIGAR=1M8D
1	179457769	.	CCTTTCTTTC	CT	.	.	CIGAR=1M9D1I
1	179457769	.	CCTTTCTTTCTT	CTCTC	.	.	CIGAR=1M11D4I
1	179457769	.	CCTTTCTTTCTTTC	CT	.	.	CIGAR=1M13D1I
1	179457769	.	CCTTTCTTTCTTT	C	.	.	MQ=0
1	179457769	.	CCTTTCTTTCTTTCTT	CTC	.	.	CIGAR=1M15D2I
1	179457769	.	CCTTTCTTTCTTTCTT	CTCTTTCTTTCTT,CTC,CTCTC	.	.	CIGAR=1M3D12M,1M15D2I,1M15D4I
1	179457769	.	CCTTTCTTTCTTTCTTT	C	.	.	CIGAR=1M16D
1	179457769	.	CCTTTCTTTCTTTCTTTC	CT	.	.	CIGAR=1M17D1I
1	179457769	.	CCTTTCTTTCTTTCTTTCTT	C	.	.	CIGAR=1M19D
1	179457769	.	CCTTTCTTTCTTTCTTTCTTTCTT	C	.	.	CIGAR=1M23D
1	179457769	.	CCTTTCTTTCTTTCTTTCTTTCTT	CTCTC	.	.	CIGAR=1M23D4I
1	179457769	.	CCTTTCTTTCTTTCTTTCTTTCTT	CTCTCTCTC	.	.	CIGAR=1M23D8I
1	179457769	.	CCTTTCTTTCTTTCTTTCTTTCTTTCTT	C	.	.	CIGAR=1M27D
1	179457769	.	CCTTTCTTTCTTTCTTTCTTTCTTTCTT	CTC	.	.	CIGAR=1M27D2I
1	179457769	.	CCTTTCTTTCTTTCTTTCTTTCTTTCTT	CTCTC	.	.	CIGAR=1M27D4I
1	179457769	.	CCTTTCTTTCTTTCTTTCTTTCTTTCTT	CTCTCTCTT,CCTTTCTTTCTTTCTTTCTTTCTTTTTCTT,CTCTTTCTTTCTTTCTTTCTTTCTTTCTT,CTTTTCTTTCTTTCTTTCTT,CTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTT,CTTTTCTTTCTT,CTCTC,CTTTTCTTTCTTTCTT,CTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTT,CTCTTTCTTTCTTTCTTTCTTTCTT,CTCTCTCTTTCTTTCTTTCTT,CTCTCTTTCTT	.	.	CIGAR=1M23D4I,22M2I2M,1M1I23M,1M9D1I,1M5D23I,1M17D1I,1M27D4I,1M13D1I,1M1D23I,1M3D14M,1M11D4I,1M19D2I
1	179457769	.	CCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTT,CTCTTTCTTTCTTTCTTTCTTT,CTCTTTCTTTCTTTCTTT,CTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCTTT,CTTTTCTTTCTTTCTTTCTTTCTTTCTTT,CTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTT,CCTTT,CCTTCTCTTTCTTTCTTTCTTT,C	.	.	MQ=0
1	179457769	.	C	CTTTTCTTT	.	.	CIGAR=1M8I
1	179457769	.	C	CTTTTCTTTCTTT	.	.	CIGAR=1M12I
1	179457769	.	C	CTTTTCTTTCTTTCTTTCTTTCT	.	.	CIGAR=1M22I
1	179457769	.	C	CTTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTT	.	.	CIGAR=1M34I
1	179457769	.	C	T	.	.	SNVSB=0
1	179504033	.	AGAAGAACAAC	ACAAG	.	.	CIGAR=1M10D4I
1	198721489	.	AGA	ACCATTTGTTTC	.	.	phastCons
1	215847905	.	GAGAGTCCATGTTC	GCAAG	.	.	phastCons
1	220603308	.	TGTGTGA	T,TGT	.	.	MQ=0
1	220603310	.	TGTGAGA	TGA,TGTGA,TGT	.	.	MQ=0
1	220603310	.	TGTGA	T,TGTGTGTGTGTGT	.	.	AF1000G=0.87
1	220603312	.	TGA	T	.	.	AF1000G=0.92
1	220603313	.	GA	GTGTGTGTGT	.	.	CIGAR=1M1D9I
1	248084746	.	AACCTGTCGTGTTGGCTCC	ACCATGTCG	.	.	CIGAR=1M18D8I
2	74642499	.	CAGGCGCCTCCTCCA	CCG	.	.	CIGAR=1M14D2I
2	85547767	.	GCC	GACA	.	.	CSQ=ACA|ENSG00000152291|ENST00000398263|Transcript|3_prime_UTR_variant&feature_elongation|3519-3520|||||||-1|TGOLN2|HGNC||protein_coding||||ENST00000398263.2
2	101014572	.	GAGCTGGCT	GTGACACAGGCTGAAGGA	.	.	CIGAR=1M8D17I
2	166810195	.	CTT	CCGCTCACCTC	.	.	phastCons
2	201354934	.	GCAAGGCGCGGT	GGAA	.	.	CIGAR=1M11D3I
2	211068105	.	TCCTGGT	TAAACATAACATTCATG	.	.	phastCons
2	215840517	.	GGCTGTCTGTT	GTTTA	.	.	phastCons
2	218712915	.	CCAC	CTGCTGCCAT	.	.	phastCons
2	231902546	.	CT	CGGGGGCGGCG	.	.	CIGAR=1M1D10I
2	238499864	.	AGC	AATTCTTCAGGAGACTCTAGT	.	.	CIGAR=1M2D20I
3	10088403	.	ACTTAGTAAG	ATTTAT	.	.	phastCons
3	14105881	.	C	A	.	.	SNVSB=-4.1
3	14105881	.	CCCAGCAGCAGCAGCCC	CACAG	.	.	CIGAR=1M16D4I
3	14105881	.	C	T	.	.	SNVSB=-5.7
3	49200619	.	CTTGGCCCA	CCG	.	.	CIGAR=1M8D2I
3	49836672	.	GACCC	GTACACATGTG	.	.	CIGAR=1M4D10I
3	53324815	.	CGGGATGGCAC	CAGGA	.	.	phastCons
3	63898380	.	CAGCAGCAGCA	CC	.	.	phastCons
3	75714824	.	AG	A	.	.	MQ=0
3	75714825	.	GGTCTCGGGCC	GTCTCAGGCT	.	.	CIGAR=1M10D9I
3	75787042	.	GGAATG	GAAATGACTTATA,GAAATGACTTATG	.	.	CIGAR=1M5D12I,1M2D9I3M
3	75787042	.	GGA	GAAATGACTT	.	.	CIGAR=1M2D9I
3	121351314	.	CG	CAGGCTCAGGCTCA	.	.	EVS=0|142.0|6503
3	121351314	.	CG	CAGGCTCGGGCTCAGGCTCGGGCTCAGGCTCA	.	.	EVS=0|142.0|6503
3	121448860	.	AATT	AGGAAAAAAGTTG	.	.	phastCons
3	124774577	.	TCCAG	TGCAGCTCCAT	.	.	CIGAR=1M4D10I
3	130116524	.	AGGCATCTTAGAA	ATCAGCTCTATCAAGGGGGT	.	.	phastCons
3	158450079	.	G	A	.	.	SNVSB=-17.4
3	158450079	.	GT	GCCCCGGGGC	.	.	EVS=0|1.0|1887
3	195506253	.	ATGAAGAGGGGTGGCGTGACCTGTGGATAATGAGGAAGCATTGGTGACAGG	AGT	.	.	CIGAR=1M50D2I
3	195509813	.	GGGTGGCATGACCTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGA	G	.	.	CIGAR=1M48D
3	195509816	.	TGGCATGACCTGTGGACACTGAGGAAGCGTCGGTGACAGGAAGAGAGGTG	TA	.	.	CIGAR=1M49D1I
3	195509914	.	GTGTGACCTGAGGATGCTGAGGAAGGGATGGTGACAGGAAGAGAGGTGGCA	GCG	.	.	CIGAR=1M50D2I
4	1087327	.	GAC	GCTGCCCAGGCTGGAGCCAGCCAT	.	.	CIGAR=1M2D23I
4	1087327	.	G	GCTGCCCAGGCTGGAGCCAGCC	.	.	MQ=0
4	40428009	.	ATGGCG	ACGGCGGCCGCGGCT	.	.	CIGAR=1M5D14I
4	76481342	.	TGGTAAC	TATGCTGGTTACTGGTA	.	.	CIGAR=1M6D16I
4	88537210	.	CAG	CAGTGA	.	.	CIGAR=1M3D6I
4	88537212	.	GTGATAGCAGTGACAGCAGCAACAGCAGTGACAGCAGTGACAGCAGTGAA	GCGAT	.	.	CIGAR=1M49D4I
4	100451038	.	TCAGGGATGACAAG	TA	.	.	CIGAR=1M13D1I
4	100451038	.	TCAGGGATGACAA	T	.	.	MQ=0
4	140811063	.	TTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC	T	.	.	MQ=0
4	140811063	.	TTGCTGCTGCTGCTGCTGCTGCTGC	TTGCTGCTGCTGCTGCTGCTGC,TTGCTGCTGCTGCTGCTGC,TTGCTGCTGCTGC,T	.	.	MQ=0
4	140811083	.	GCTGCTGCTGCTGC	GT	.	.	phastCons
4	175899117	.	AACCTCCTGTGACGCCCTCCTAGAGCCAA	AT	.	.	CIGAR=1M28D1I
5	1036899	.	CCGGCAGTGTGGACAACA	CT	.	.	CIGAR=1M17D1I
5	1036961	.	TCGACA	TAGACAGCAGGCAGTGTGGATGGCAG	.	.	CIGAR=1M5D25I
5	35965705	.	CTA	CATCAGTTTCTG	.	.	CIGAR=1M2D11I
5	66462053	.	CAGACAACAGACAGACA	CG	.	.	phastCons
5	74865168	.	GA	GTCAACCTTAATCTGT	.	.	EVS=0|55.0|6503
5	79950706	.	GCTGCAGCGGCCGCAGCGGCCGCAGCGC	G,GCTGCAGCGGCCGCAGCGCCCCCAGCGCCCCCAGCGCCCCCAGCGCCCCCAGCGC	.	.	phastCons
5	79950706	.	GCTGCAGCGGCCGCAGCGGCCGCAGCGC	G,GCTGCAGCGGCCGCAGCGGCCGCAGCGGCCGCAGCGCCCGCAGCGC,GCTGCAGCGGCCGCAGCGGCCGCAGCGCCCGCAGCGC,GCTGCAGCGGCCGCAGCGC	.	.	phastCons
5	110448749	.	ATATT	A	.	.	CIGAR=1M4D
5	110448751	.	ATT	A,ATAT,ATTT,ATTTTTTT,ATATATATTT,ATATTTTTT,ATATATTTTT,ATATAT	.	.	MQ=0
5	110448751	.	ATTTTTTTT	ATTTTTT,ATATATATATATATTTTTT,ATATATATATATTTT,ATATATATATATTTTTT,ATATATATATATA,ATATATATATATATATATATTTTTT	.	.	CIGAR=1M2D,2M1D11I,2M3D9I,2M1D9I,2M7D11I,2M1D17I
5	110448752	.	T	TA	.	.	MQ=0
5	110448752	.	T	TATATATA	.	.	CIGAR=1M7I
5	110448752	.	T	TATTTT	.	.	MQ=0
5	110448752	.	TT	TATATATATA	.	.	EVS=0|10.0|6175
5	110448752	.	TT	TATATATATATATATATA	.	.	EVS=0|10.0|6175
5	110448752	.	TTTT	TATATATATATATATATATA	.	.	CIGAR=1M3D19I
5	110448752	.	TTTT	TATTT,TATATATATA	.	.	CIGAR=1M1I3M,1M3D9I
5	110448752	.	TTTTTTTT	TATATATATATA	.	.	CIGAR=1M7D11I
6	30681076	.	TGAAGGCAAAAGGCGGCCCAAGGCCG	TC	.	.	CIGAR=1M25D1I
6	30954367	.	GACTCCAGCACAACC	GGG	.	.	CIGAR=1M14D2I
6	31165565	.	GTCGTG	GCCGTGGTGTTTCAA	.	.	CIGAR=1M5D14I
6	31322923	.	CTCCGA	CGACCACAGCTACGG	.	.	CIGAR=1M5D14I
6	31324522	.	GTGCCTGGGCCTTGTAGATCTGTG	GCGCGGAGGCCTTCA	.	.	CIGAR=1M23D14I
6	31503023	.	CC	CTTGGGCACAAGG	.	.	phastCons
6	31503023	.	C	CTTGGGCACAAG	.	.	MQ=0
6	31736973	.	A	AGACTCACCTGG	.	.	MQ=0
6	31736973	.	AATGTT	AGACTCACCTGGTACTC	.	.	phastCons
6	76022695	.	TCTTGGTTTCTGATT	TATTCCTA	.	.	phastCons
6	108243106	.	GTGGCTCCCTGGGGAAAAAC	GGGGCCCCCAGGGGGGGG,GTGGCTCCCTGGGGAAAA	.	.	phastCons
6	116937770	.	TTTCTT	TCACGCCCCTTTCATCCA	.	.	CIGAR=1M5D17I
6	117113761	.	A	AGG	.	.	MQ=0
6	117113761	.	A	AGGTAAT	.	.	MQ=0
6	117113761	.	A	AGGT	.	.	MQ=0
6	117113761	.	ATATT	AGGTAATTTCC	.	.	phastCons
6	132030021	.	GGCCCCTTGTATCCACTGGAAACAATGGACCG	GACCA	.	.	CIGAR=1M31D4I
6	159660779	.	GCCACCACCCGCCGCACGACCACCACCCG	GCCACCACCCG,GCCACCACCCA	.	.	CIGAR=1M18D10M,10M19D1I
6	159660779	.	GCCACCACCCGCCGCACGA	G	.	.	MQ=0
6	170592484	.	TCGGCGCTGTG	TT	.	.	CIGAR=1M10D1I
6	170871046	.	ACAGCAGCAG	A	.	.	phastCons
6	170871046	.	ACAGCAGCAGCAG	A	.	.	phastCons
6	170871046	.	ACAGCAGCAGCAGCAGCAGCAGCAGCAG	A	.	.	phastCons
6	170871051	.	A	AACA	.	.	phastCons
6	170871051	.	AGCAGCAGCAG	AA	.	.	phastCons
6	170871051	.	AGCAGCAGCAGCAG	AA	.	.	phastCons
6	170871051	.	AGCAGCAGCAGCAGCAG	AA	.	.	phastCons
6	170871051	.	AGCAGCAGCAGCAGCAGCAGCAG	AA	.	.	phastCons
6	170871051	.	AGCAGCAGCAGCAGCAGCAGCAGCAG	AA	.	.	phastCons
6	170871051	.	AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG	AA	.	.	phastCons
7	4820843	.	CGGAT	CTGCTGTAAACTGTAACTGTAAA	.	.	phastCons
7	6037018	.	TAGGGGG	TCTTCACACACA	.	.	phastCons
7	8196567	.	AAAAAAAAAAAAAAAAAAGAAAG	AAAAG,A	.	.	MQ=0
7	8196570	.	AAAAAAAAAAAAAAAGAAAGAA	AGAC	.	.	CIGAR=1M21D3I
7	8196570	.	A	G	.	.	SNVSB=0
7	27135308	.	GGGTGGCGAT	G	.	.	MQ=0
7	27135310	.	GTGGCGA	G	.	.	MQ=0
7	27135313	.	GCGA	G	.	.	MQ=0
7	27135313	.	GCGA	GTGATGGTGGTGG	.	.	phastCons
7	65112494	.	AGCTTTTTGCCCGCGCCGCCGCGGCTTTTTGCCCCCGT	AGCTTTTTGCCCCCGT,AGCTTTTTGCCCGCGC	.	.	CIGAR=1M22D15M,16M22D
7	65112503	.	CCC	CGTGCGCCGCCGCGGCTTTTTGCCCCCGCCGCCTAAGCTTTTTGCCT	.	.	CIGAR=1M2D46I
7	65112504	.	CC	CTGCGCCGCCGCGGCTTTTTGCCCCCGCCGCCTAAGCTTTTTGCCT	.	.	CIGAR=1M1D45I
7	65112504	.	CC	CTGCGCCGCCGCGGCTTTTTGCCCCCGTCGCCTAAGCTTTTTGCCT	.	.	CIGAR=1M1D45I
7	65112504	.	CCGCGCCGCCGCGGCTTTTTGCCCCCGT	CTGCGCCGCCGCGGCTTTTTGCCCCCGTCGCCGCGGCTTTTTGCCCCCGT,CCGCGC	.	.	CIGAR=1M5D27I22M,6M22D
7	65112504	.	C	CTGCGCCGCCGCGGCTTTTTGCCCCCGCCGCCTAAGCTTTTTGCC	.	.	CIGAR=1M44I
7	65112504	.	C	G	.	.	SNVSB=-4.3
7	65112509	.	CCGCCGCGGCTTTTTGCCCCCGT	C,CCGCCGCGGCTTTTTGCCCCCGCCGCCTAAGCTTTTTGCCTGCGC	.	.	CIGAR=1M22D,22M1D23I
7	65112509	.	CCGCCGCGGCTTTTTGCCCCCGT	C	.	.	MQ=0
7	76144556	.	GCGCT	GGGCTGGGGGAGATGGGGCGCC	.	.	CIGAR=1M4D21I
7	82784831	.	TCT	TGTGCTGAGCTGGAGGCTTAGCAGGACCAAGAG	.	.	CIGAR=1M2D32I
7	100678416	.	CAACATCTCCCGTTGACAC	CCCCAACTCCTGTTGACTA	.	.	CIGAR=1M18D18I
7	100678416	.	CAACATCTCCCGTTGACAC	CCCCAACTCCTTTGACTA	.	.	CIGAR=1M18D17I
7	140287552	.	GCAGTAAAT	GAGAGTCTTCAA	.	.	phastCons
7	143955883	.	AAGAGGCTGTGAAACAGC	ACG	.	.	phastCons
7	150069392	.	GCCGCCGCCAGGGGCC	GTCG	.	.	CIGAR=1M15D3I
7	150783899	.	GCGCTGCCGCGCAGCAGCTCGTCT	GTGGCGGCGGCGGCGGCAGCGCGGGGG	.	.	phastCons
7	150783901	.	GCTGCCGCGCAGCAGCTCGTCT	GGCAGCGCGGGGG	.	.	CIGAR=1M21D12I
7	150783901	.	GCTGCCGCGCAGCAGCTCGTCT	GGCGGCGGCGGCGGCAGCGCGGGGG	.	.	CIGAR=1M21D24I
8	10467578	.	TTTC	T	.	.	MQ=0
8	10467580	.	TCTTTAGTTT	TTAGTCC	.	.	CIGAR=1M9D6I
8	10467651	.	C	CCTCTCTTCTTGCAGCCCTTCTATTACTTTAGTCCCCTCTAACTGCACC	.	.	CIGAR=1M48I
8	10467651	.	CG	CCTCTCTTCTTGCAGCCCTTCTATTACTTTAGTCCCCTCTAACTGCACCC	.	.	EVS=0|134.0|6088
8	10467651	.	CG	CCTCTCTTCTTGCAGCCCTTCTTCTGTTTTAGTTTCCTCTAACTGCACCC	.	.	EVS=0|134.0|6088
8	23282558	.	A	AG	.	.	MQ=0
8	23282558	.	ACGCA	ATACAGTATTCCATGGCAGTATT	.	.	CIGAR=1M4D22I
8	62580816	.	GCTAC	GGTCCTTCTGGGA	.	.	phastCons
8	86126497	.	TGTC	TCCAAACAGACGTT	.	.	CIGAR=1M3D13I
8	95423478	.	TAACTAGGCTATCA	TG	.	.	phastCons
8	145008155	.	CACCC	CCGACTGCTGCCTCACCGACTG	.	.	phastCons
8	145008155	.	C	CCGACT	.	.	MQ=0
8	145622990	.	GCCACTGCGGCCCCCG	GGGCCGC	.	.	phastCons
8	145622990	.	GCCACTGC	G	.	.	phastCons
9	38411406	.	GTCATCGGGA	GGAT	.	.	CIGAR=1M9D3I
9	69391170	.	CGCTCAAGACAT	CACTAAAGAC	.	.	CIGAR=1M11D9I
9	88356832	.	CGGCAGCTGC	CAGCTGCGGCGGCGGCGCTGGA	.	.	phastCons
9	97080922	.	CGCTTCTTGGA	CTCTT	.	.	CIGAR=1M10D4I
9	98534581	.	TCT	TACACACACACACACACACACACACAC	.	.	CIGAR=1M2D26I
9	127302278	.	TAGATGATGACCA	TTAAAGCTCACCTTTAAGGGATTTGCCTTAAAGCTCACC	.	.	CIGAR=1M12D38I
9	136221515	.	CGGCTGGCAGA	CAT	.	.	phastCons
11	608502	.	CGGACGCGCTCTG	C	.	.	MQ=0
11	608506	.	CGCGCTCTGGGACG	CA	.	.	CIGAR=1M13D1I
11	640056	.	TCCCCGGGGTCCCTGCGGCCCCGACTGTGCGCCCGCCGCGCCCAGCCTC	T	.	.	CIGAR=1M48D
11	640058	.	CCCGGGGTCCCTGCGG	CA	.	.	CIGAR=1M15D1I
11	1092576	.	ACCAACCACCACTCCCAGCCCTCCAACCACCACTCCCAGCCCT	A	.	.	CIGAR=1M42D
11	1092601	.	ACCACCACTCCCAGCCCTC	A	.	.	CIGAR=1M18D
11	1092602	.	CCACCACTCCCAGCCCTCCAACCACCACTCCCAGCCCTCCAACAACC	CAACG	.	.	CIGAR=1M46D4I
11	1092691	.	ACGACTACGCCCATCACTCCACCAGCCAGCACTACCACCCTTCCAC	A	.	.	CIGAR=1M45D
11	1092692	.	CGACTACGCCCATCACTCCACCAGCCAGCACT	CAACCACCACA	.	.	CIGAR=1M31D10I
11	1092692	.	C	T	.	.	SNVSB=0
11	1651585	.	CCTGCTGCCAGTCCAGCTGCTGTAAGCCTTACTGCTGCCAG	CCTGCTGCCAG,CCTGCTGCCAA	.	.	phastCons
11	1651585	.	CCTGCTGCCAGTCCAGCTGCTGTAAGCCTTACTGCTGCCAGTCCAGCTGCTGTAAGCCC	CCTGCTGCCAGTCCAGCTGCTGTAAGCCC,CCTGCTGCCAGTCCAGCTGCTGTAAGCCT	.	.	phastCons
11	1651594	.	AGTCCAGCTGCTGTAAGCCTTACTGCTGCCAG	AA	.	.	phastCons
11	1651594	.	AGTCCAGCTGCTGTAAGCCTTACTGCTGCCAGTCCAGCTGCTGTAAGCCC	AATCCAGCTGCTGTAAGCCC,AGTCCAGCTGCTGTAAGCCT	.	.	phastCons
11	1905253	.	AAGTAAGTTAAGCT	AGATG	.	.	phastCons
11	5842346	.	TTTTTCACTCA	TG	.	.	CIGAR=1M10D1I
11	6411930	.	CCTGGTG	C	.	.	CIGAR=1M6D
11	6411930	.	CCTGGTGCTGGCGCTGGCGCTGGCG	CCTGGCGCTGGCG,CCTGGTGCTGGCGCTGGCG,CCTGGCG,CCTGGCGCTGGCGCTGGTGCTGGCGCTGGCGCTGGCG,CCTGGCGCTGGCGCTGGCG,C	.	.	MQ=0
11	6411930	.	CCTGGTGCTGGCGCTGGCGCTGGCGCTGGCG	C	.	.	MQ=0
11	6411934	.	GT	GCGCTGGCGCTGGC	.	.	EVS=0|15.0|6431
11	6567906	.	CG	CATGCCCTACTGCA	.	.	EVS=0|52.0|2283
11	6567906	.	C	G	.	.	SNVSB=-7.8
11	8797734	.	CCT	CACACACACACACACACACCC	.	.	CIGAR=1M2D20I
11	59244998	.	CTTGGTGTA	CAAACCCACCAAAGTCT	.	.	CIGAR=1M8D16I
11	65029761	.	ACCA	GCCTA	.	.	B_FORMAT=chr11
11	68671276	.	CATGG	CGTGGCCGCCGCCATCTTC	.	.	phastCons
11	73371882	.	GGACC	GCAGGTAAGTCTCCT	.	.	phastCons
11	108352010	.	TTTTCTTTGGACAGCT	TGCATCTA	.	.	phastCons
12	7045888	.	GCAACAGCAGCAGCAGCAGCAGCAG	GCAGCAGCAGCAGCAGCAGCAG,GCAA	.	.	MQ=0
12	7045891	.	ACAGCAGCAG	ACAG,A,ACAGCAGCAGCAGCAG	.	.	MQ=0
12	7045891	.	ACAGCAGCAGCAG	A	.	.	MQ=0
12	7045891	.	ACAGCAGCAGCAGCAG	A	.	.	MQ=0
12	7045891	.	ACAGCAGCAGCAGCAGCAGCAG	A,ACAGCAG,ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG,ACAGCAGCAGCAGCAGCAGCAGCAG	.	.	MQ=0
12	7045891	.	ACAGCAGCAGCAGCAGCAGCAG	ACAGCAGCAGCAGCAGCAG,ACAGCAG,ACAGCAGCAGCAG,A,ACAG,ACAGCAGCAGCAGCAGCAGCAGCAGCAG,ACAGCAGCAGCAGCAGCAGCAGCAG,ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG,ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG,ACAGCAGCAGCAGCAG,ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG,ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAG,ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG,ACAGCAGCAG	.	.	MQ=0
12	7045891	.	ACAGCAGCAGCAGCAGCAGCAGCAG	A	.	.	CIGAR=1M24D
12	7045896	.	AGCAGCAGCAGCAGCAGCAGCAG	AA	.	.	CIGAR=1M22D1I
12	12630675	.	GCACGCTGGGC	GT	.	.	CIGAR=1M10D1I
12	48140489	.	CAGCAAGGGCCCC	CCCT	.	.	CIGAR=1M12D3I
12	49724075	.	GAGCATAACTC	GG	.	.	CIGAR=1M10D1I
12	50745782	.	CTGAGCCTGCGCCTGCTGAGGGGTGAGAGGGATCCCCAGTT	CAGTG	.	.	CIGAR=1M40D4I
12	51620066	.	ATATATATATATATATATATATATATATATATATATATTTTT	A	.	.	CIGAR=1M41D
12	51620068	.	ATATATATATATATATATATATATATATATATATATT	A	.	.	CIGAR=1M36D
12	51620069	.	TATATATATATATATATATATATATATATATATA	TTT	.	.	CIGAR=1M33D2I
12	51620069	.	TATATATATATATATATATATATATATATATATA	TTTTT	.	.	CIGAR=1M33D4I
12	52844177	.	ATGGAGTC	ACTGAGTCCATTTCTCCTGTTTAA	.	.	phastCons
12	53162772	.	CA	CGCTGCTGCTG	.	.	EVS=0|12.0|6219
12	53162772	.	C	CGCT	.	.	MQ=0
12	91363871	.	CCAAGTTGTTATCAG	CAC	.	.	phastCons
12	112036761	.	CTGCTGCTGCTGCTGCTGCTGT	C	.	.	MQ=0
12	112036764	.	CTGCTGCTGCTGCTGCTGT	C	.	.	MQ=0
12	112036770	.	CTGCTGCTGCTGT	C	.	.	CIGAR=1M12D
12	112036776	.	CTGCTGT	C	.	.	CIGAR=1M6D
12	112036778	.	GCTGT	GTTGCTGCTGC	.	.	CIGAR=1M4D10I
12	112036778	.	GCTGT	GTTGCTGCTGCTGC	.	.	CIGAR=1M4D13I
12	112036778	.	GCTGT	GTTGCTGCTGCTGCTGCTGCTGCTGC	.	.	CIGAR=1M4D25I
12	112036778	.	GCTGTTGCTGCTGC	GT	.	.	CIGAR=1M13D1I
12	112036778	.	GCTGTTGCTGCTGCTGCTGC	GT	.	.	CIGAR=1M19D1I
12	132547089	.	AACAA	AGCAACAGCAG	.	.	phastCons
13	41086958	.	GGTAATTATCTGA	GCATTTAAGCAGGAA	.	.	AB=0.46875
13	70681597	.	AT	ACGAAGAGGAAGAGGACGGGGAGGACGAC	.	.	EVS=0|83.0|6503
13	100622666	.	GT	GCGGCGGCGGC	.	.	EVS=0|5.0|6129
13	108518714	.	CCGCTGCTGCTGCT	CTGCC	.	.	phastCons
14	22476137	.	AAGGT	A	.	.	MQ=0
14	22476138	.	AGGTAACTCA	AATTTC	.	.	phastCons
14	24727782	.	CTCGTCGAA	CAT	.	.	phastCons
14	60451931	.	GTATACCACTTGGTAAGAATT	GGAAC	.	.	phastCons
14	77493853	.	CTGCTGCCGCCGCCGCCGCCGCT	CC	.	.	phastCons
14	77493874	.	CT	CCGCCGCCGCC	.	.	EVS=0|2.0|3647
14	92537353	.	CC	CGCTGCTGCTGCTGCTGCTGCTG,CCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG	.	.	EVS=0|82.0|6503
14	92537353	.	CC	CGCTGCTGCTGCTGCTGCTGCTGCTC,CGCTGCTGCTGCTGCTGCTG	.	.	EVS=0|82.0|6503
14	92537353	.	CC	CGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG,CCCTGCTGCTGCTG	.	.	EVS=0|82.0|6503
14	92537353	.	CC	CGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG,CCCTGCTGCTGCTGCTGCTGCTGCTGCTG,CGCTGCTGCTGCTGCTGCTC,CGCTGCTGCTGCTGCTGCTGCTG,CGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTC,CCCTGCTGCTGCTGCTGCTGCTGCTG,CGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG	.	.	EVS=0|82.0|6503
14	92537353	.	CC	CGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG	.	.	EVS=0|82.0|6503
14	92537353	.	CC	CGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG	.	.	EVS=0|82.0|6503
14	92537353	.	CC	CGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG	.	.	EVS=0|82.0|6503
14	92537353	.	CC	CGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG	.	.	EVS=0|82.0|6503
14	92537353	.	CC	CGCTGCTGCTGCTGCTGCTGCTG	.	.	EVS=0|82.0|6503
14	92537353	.	C	CGCTGCTGCTGCTGCTGCTGCT,CGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT,CGCTGCTGCTGCTGCTGCT	.	.	MQ=0
14	92537353	.	C	CGCTGCTGCTGCTGCTGCTGCTGCTGCT	.	.	CIGAR=1M27I
14	92537353	.	C	CGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT	.	.	CIGAR=1M36I
14	92537353	.	C	CGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT	.	.	CIGAR=1M42I
14	92537353	.	C	CGCTGCTGCTGCTGCTGCTGCTGCT	.	.	MQ=0
14	92537353	.	C	CGCTGCTGCTGCTGCTGCT	.	.	MQ=0
14	92537378	.	G	GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG	.	.	phastCons
14	92537378	.	GT	GCTGCTGCTGCTGCTGC	.	.	EVS=0|45.0|6503
14	92537378	.	GT	GCTGCTGCTGCTGCTGCTGCTGC	.	.	EVS=0|45.0|6503
14	92537378	.	GT	GCTGCTGCTGCTGCTGCTGCTGCTGC	.	.	EVS=0|45.0|6503
14	93532677	.	GTGTGT	G	.	.	MQ=0
14	93532677	.	GTGTGTGTGTA	GGGGG	.	.	CIGAR=1M10D4I
14	93532677	.	GTGTGTGTGTAGG	GGGGGGGC	.	.	CIGAR=1M12D7I
14	95085546	.	CCCTTTGA	C,CCCCCCAAGATACTCATCATTTGA	.	.	MQ=0
14	95085548	.	CTT	CCCCAAGATACTCATCAGA	.	.	CIGAR=1M2D18I
14	106359403	.	ACCATAGCTGTATC	ATCGTAGCCACTATATT	.	.	CIGAR=1M13D16I
14	107095323	.	AACCACC	A	.	.	MQ=0
14	107095325	.	CCACCACTG	CTA	.	.	CIGAR=1M8D2I
15	40631741	.	AGGCCATCAGGCTGGAGGAGTGCTGGTGTGGTCA	ACCACAC	.	.	phastCons
15	74836313	.	GCAA	G	.	.	MQ=0
15	74836315	.	AACAA	AGCAGCAGCAGCAGCAGCAGCAGCAG	.	.	phastCons
15	74836315	.	AACAA	AGCAGCAGCAGCAGCAGCAGCAG	.	.	phastCons
16	310007	.	GGGCCAACGGCA	GAGCT	.	.	phastCons
16	310007	.	GGGCCAAC	G	.	.	MQ=0
16	2203812	.	GAC	GCTCAGGCAGCGTGGGA	.	.	CIGAR=1M2D16I
16	57850708	.	CAGGGAACC	CTTCCAGGCAGGAGCTCATGGGAAAGCT	.	.	CIGAR=1M8D27I
16	70954703	.	GGCGCTCCTTCTCCGTG	GA	.	.	phastCons
16	70954703	.	GGCGCTCCTTCTCCGT	G	.	.	MQ=0
16	88599696	.	GAGCCTCTGG	GCCC	.	.	phastCons
16	90095595	.	TATGGGGCAGCCTACGGGGCAGGCTA	TG	.	.	CIGAR=1M25D1I
16	90095595	.	TAT	TGCGGGGCAGCCTACGGGGCAGGCTGC	.	.	CIGAR=1M2D26I
17	8701168	.	AATGTAGC	A	.	.	MQ=0
17	8701168	.	AATGTAGCTTTG	ATCCT	.	.	CIGAR=1M11D4I
17	17697093	.	CCAGCAGCAGCAGCAG	CCAGCAGCAGCAG,CCAGCAGCAGCAGCAGCAG,CCAGCAGCAG,CCAG,CCAGCAG,C	.	.	MQ=0
17	17697093	.	CCAGCAGCAGCAGCAG	C	.	.	MQ=0
17	17697093	.	CCAGCAGCAGCAG	C	.	.	MQ=0
17	17697093	.	CCAGCAGCAG	C	.	.	MQ=0
17	17697098	.	AGCAGCAGCAGCAG	AA	.	.	phastCons
17	38975314	.	GTGGCCGCCGCCGT	GC	.	.	phastCons
17	38975327	.	T	C	.	.	SNVSB=-6.3
17	38975327	.	TGG	TAGCCGCCGCCGGAGCTT	.	.	CIGAR=1M2D17I
17	39240640	.	AACCCACCTGCTGTCGCCCCACCTGCTGTGAGACG	AGCCA	.	.	CIGAR=1M34D4I
17	39240660	.	ACCTGCTGTGAGACGACCTGCTGCCACCCTAGG	AGC	.	.	CIGAR=1M32D2I
17	39471752	.	TGCCCCCGCAGCCAGA	T	.	.	MQ=0
17	39471762	.	GCCAGAGCCCCCGCAGC	GT	.	.	phastCons
17	40654829	.	GGCCCCAGTCA	G	.	.	MQ=0
17	40654833	.	CCAGTCAGCCCAAA	CAAC	.	.	phastCons
17	46115074	.	GCCCCCGGCCT	GGCCCCTGGCCTGG,GCCCCCGGCCTGG	.	.	phastCons
17	46607020	.	TT	TCCCTACCTC	.	.	EVS=0|106.0|6503
17	55943856	.	GCCTTCCTC	GA	.	.	phastCons
17	73596688	.	C	CTTTTT	.	.	MQ=0
17	73596688	.	CGGAG	CTTTTTTTTT	.	.	CIGAR=1M4D9I
17	79090082	.	GCC	GGGAGCAGG	.	.	CIGAR=1M2D8I
17	79093266	.	GGAGC	GAAGCGGGCGT	.	.	CIGAR=1M4D10I
18	34340659	.	TGAAGGCTGTG	TC	.	.	phastCons
18	56204387	.	ACAGTTGATGTGTCCT	A	.	.	MQ=0
18	56204391	.	TTGATGTGTCCTCAGTCTCC	TCTCT	.	.	CIGAR=1M19D4I
18	77905339	.	CTGCG	CCGCGCTGTGGTGC	.	.	CIGAR=1M4D13I
18	77905339	.	CTGCG	CCGCGCTGTGGTGC,CTGCGCTGTGGTGC	.	.	CIGAR=1M4D13I,5M9I
19	11465264	.	GGGCACCAGTGCCTGAGCCCTCCA	GAC	.	.	CIGAR=1M23D2I
19	13873843	.	CTCCCTCGTGGCGGACTACTCCGAC	CAG	.	.	phastCons
19	20989972	.	T	A,CCGCA	.	.	AC=1916,
19	46307976	.	TCGT	TGGTCCTCCTCGC	.	.	phastCons
19	47092832	.	CCCGCCT	C	.	.	MQ=0
19	47092833	.	CCGCCTCGGCCT	CGAGGC	.	.	CIGAR=1M11D5I
19	49930546	.	GAAA	GTCTCTACC	.	.	CIGAR=1M3D8I
19	49930546	.	G	GTCTCT	.	.	CIGAR=1M5I
19	55048345	.	TAAGC	TGAGTGGTCAGA	.	.	CIGAR=1M4D11I
20	1896051	.	CCGA	C	.	.	MQ=0
20	1896051	.	CCGATGACGT	CTGACAC	.	.	CIGAR=1M9D6I
20	15967742	.	TGTGGAGCAA	TCATCAAACCAAGAAGATG	.	.	phastCons
20	43378777	.	CCACGCC	CGCCATAGAGTACG	.	.	CIGAR=1M6D13I
20	47775467	.	ATCCTTTA	AATAATCTTTTAC	.	.	CIGAR=1M7D12I
21	46020655	.	CCTGCTGCGCCCCCAG	C	.	.	MQ=0
21	46020655	.	CCTGCTGCGCCCCCAGCTGCTGCG	CCTGCTGCG,CCTGCTGCA	.	.	phastCons
21	46020662	.	C	T	.	.	SNVSB=0
21	46924416	.	CGGCCCCCCCGGCCCCCCAGGCCCCCCA	CGGCCCCCCA,CGGCCCCCCCGGCCCCCCA,CGGCCCCCCC	.	.	MQ=0
21	46924425	.	CGGCCCCCCAGGCCCCCCA	CGGCCCCCCA,C	.	.	MQ=0
21	46924439	.	CCCCAGGCCCAC	CAT	.	.	CIGAR=1M11D2I
21	46924439	.	CCCCAGGCCCACG	CACA	.	.	CIGAR=1M12D3I
22	20138003	.	CTCCTGCTCCAGCT	CGA	.	.	phastCons
22	20710051	.	ACGCCGTCCAGGGCGTCGCTAACGAGGTC	AT	.	.	CIGAR=1M28D1I
22	20780025	.	CGCGGCG	CCGCGGCCC	.	.	phastCons
22	23047143	.	GCCCCT	GTCTGATATAC	.	.	CIGAR=1M5D10I
22	23047145	.	CCCT	CTGATATAC	.	.	CIGAR=1M3D8I
22	23047145	.	C	CTGATA	.	.	MQ=0
22	23498328	.	CCAAGAC	CTGAGAAAACCACTGAGAAAACA	.	.	CIGAR=1M6D22I
22	23498328	.	C	CTGAGAAAACCACTGAG	.	.	MQ=0
