/*===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software/database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software/database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
 *  purpose.
 *
 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 */

#ifndef _h_sra_sort_xcheck_
#define _h_sra_sort_xcheck_

#ifndef _h_sra_sort_defs_
#include "sort-defs.h"
#endif


/*--------------------------------------------------------------------------
 * forwards
 */
struct VTable;


/*--------------------------------------------------------------------------
 * CrossCheckRefAlignTbl
 *  checks REFERENCE.<name>_IDS for properly sorted form
 *  runs a cross-check of REFERENCE.<name>_IDS against <name>.REF_ID
 */
void CrossCheckRefAlignTbl ( const ctx_t *ctx,
    struct VTable const *ref_tbl, struct VTable const *align_tbl, const char *align_name );

#endif
